Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
18:09:22 (83119): wrapper (7.7.26015): starting
18:09:22 (83119): wrapper: running run_atlas (--nthreads 3)
[2025-10-13 18:09:22] Arguments: --nthreads 3
[2025-10-13 18:09:22] Threads: 3
[2025-10-13 18:09:22] Checking for CVMFS
[2025-10-13 18:09:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 18:09:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 18:09:22] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 18:09:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 18:09:22] 2.9.2.0 2545361 6036 82624 151666 0 57 21912535 36864000 0 130560 0 4433196 99.990 203986 914 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 18:09:22] CVMFS is ok
[2025-10-13 18:09:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 18:09:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 18:09:22] Further information can be found at the LHC@home message board.
[2025-10-13 18:09:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 18:09:22] Checking for apptainer binary...
[2025-10-13 18:09:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 18:09:22] Running /usr/bin/apptainer --version
[2025-10-13 18:09:22] apptainer version 1.4.1-1.1
[2025-10-13 18:09:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 18:09:22] atlasA212
[2025-10-13 18:09:22] apptainer works
[2025-10-13 18:09:22] Set ATHENA_PROC_NUMBER=3
[2025-10-13 18:09:22] Set ATHENA_CORE_NUMBER=3
[2025-10-13 18:09:22] Starting ATLAS job with PandaID=6841069404
[2025-10-13 18:09:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 19:41:44]  *** The last 200 lines of the pilot log: ***
[2025-10-13 19:41:44]  is_tar=False
[2025-10-13 19:41:44]  lfn=log.46676269._093536.job.log.tgz.1
[2025-10-13 19:41:44]  mtime=0
[2025-10-13 19:41:44]  protocol_id=None
[2025-10-13 19:41:44]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-13 19:41:44]  replicas=None
[2025-10-13 19:41:44]  scope=mc23_13p6TeV
[2025-10-13 19:41:44]  status=None
[2025-10-13 19:41:44]  status_code=0
[2025-10-13 19:41:44]  storage_token=
[2025-10-13 19:41:44]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6841069404/log.46676269._093536.job.log.tgz.1
[2025-10-13 19:41:44]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/16/a6/log.46676269._093536.job.log.tgz.1
[2025-10-13 19:41:44]  workdir=None
[2025-10-13 19:41:44] ]
[2025-10-13 19:41:44] 2025-10-13 17:41:06,015 | INFO     | transferring file log.46676269._093536.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6841069404/log.46676269._093536.job.log.tgz.1 to /local/data/boinc/
[2025-10-13 19:41:44] 2025-10-13 17:41:06,015 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6841069404/log.46676269._093536.job.log.tgz.1 /local/data/boinc/slots/0/log.46676269._0935
[2025-10-13 19:41:44] 2025-10-13 17:41:06,031 | INFO     | adding to output.list: log.46676269._093536.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/16/a6/log.46676269._093536.job.log.tg
[2025-10-13 19:41:44] 2025-10-13 17:41:06,032 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 19:41:44] 2025-10-13 17:41:06,032 | INFO     | summary of transferred files:
[2025-10-13 19:41:44] 2025-10-13 17:41:06,032 | INFO     |  -- lfn=log.46676269._093536.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 19:41:44] 2025-10-13 17:41:06,032 | INFO     | stage-out finished correctly
[2025-10-13 19:41:44] 2025-10-13 17:41:06,064 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 19:41:44] 2025-10-13 17:41:07,437 | INFO     | job 6841069404 has state=finished
[2025-10-13 19:41:44] 2025-10-13 17:41:07,437 | INFO     | preparing for final server update for job 6841069404 in state='finished'
[2025-10-13 19:41:44] 2025-10-13 17:41:07,437 | INFO     | this job has now completed (state=finished)
[2025-10-13 19:41:44] 2025-10-13 17:41:07,437 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 19:41:44] 2025-10-13 17:41:07,438 | INFO     | log transfer has been attempted: DONE
[2025-10-13 19:41:44] 2025-10-13 17:41:07,438 | INFO     | job 6841069404 has finished - writing final server update
[2025-10-13 19:41:44] 2025-10-13 17:41:07,438 | INFO     | total number of processed events: 400 (read)
[2025-10-13 19:41:44] 2025-10-13 17:41:07,438 | INFO     | executing command: lscpu
[2025-10-13 19:41:44] 2025-10-13 17:41:07,454 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 19:41:44] 2025-10-13 17:41:07,648 | INFO     | time since job start (5497s) is within the limit (172800.0s)
[2025-10-13 19:41:44] 2025-10-13 17:41:09,163 | WARNING  | process 93264 can no longer be monitored (due to stat problems) - aborting
[2025-10-13 19:41:44] 2025-10-13 17:41:09,163 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6841069404/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 19:41:44] 2025-10-13 17:41:09,241 | INFO     | number of running child processes to parent process 93264: 1
[2025-10-13 19:41:44] 2025-10-13 17:41:09,241 | INFO     | maximum number of monitored processes: 6
[2025-10-13 19:41:44] 2025-10-13 17:41:09,655 | INFO     | time since job start (5499s) is within the limit (172800.0s)
[2025-10-13 19:41:44] 2025-10-13 17:41:10,259 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 19:41:44] 2025-10-13 17:41:10,260 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 4269.655250000001
[2025-10-13 19:41:44] 2025-10-13 17:41:10,261 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6841069404/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 19:41:44] 2025-10-13 17:41:10,262 | INFO     | extracted standard info from prmon json
[2025-10-13 19:41:44] 2025-10-13 17:41:10,262 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 19:41:44] 2025-10-13 17:41:10,262 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 19:41:44] 2025-10-13 17:41:10,262 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 19:41:44] 2025-10-13 17:41:10,262 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 19:41:44] 2025-10-13 17:41:10,263 | INFO     | fitting pss+swap vs Time
[2025-10-13 19:41:44] 2025-10-13 17:41:10,263 | INFO     | sum of square deviations: 177275882.0
[2025-10-13 19:41:44] 2025-10-13 17:41:10,263 | INFO     | sum of deviations: 51634365.00000003
[2025-10-13 19:41:44] 2025-10-13 17:41:10,263 | INFO     | mean x: 1760374597.0
[2025-10-13 19:41:44] 2025-10-13 17:41:10,263 | INFO     | mean y: 2347719.6626506024
[2025-10-13 19:41:44] 2025-10-13 17:41:10,263 | INFO     | -- intersect: -510388832.2740983
[2025-10-13 19:41:44] 2025-10-13 17:41:10,263 | INFO     | intersect: -510388832.2740983
[2025-10-13 19:41:44] 2025-10-13 17:41:10,263 | INFO     | chi2: 0.0016906935839277237
[2025-10-13 19:41:44] 2025-10-13 17:41:10,263 | INFO     | -- intersect: -510388832.2740983
[2025-10-13 19:41:44] 2025-10-13 17:41:10,263 | INFO     | current memory leak: 0.29 B/s (using 83 data points, chi2=0.00)
[2025-10-13 19:41:44] 2025-10-13 17:41:10,263 | INFO     | could have reported an average CPU frequency of 4321 MHz (7 samples)
[2025-10-13 19:41:44] 2025-10-13 17:41:10,263 | INFO     | ..............................
[2025-10-13 19:41:44] 2025-10-13 17:41:10,263 | INFO     | . Timing measurements:
[2025-10-13 19:41:44] 2025-10-13 17:41:10,263 | INFO     | . get job = 0 s
[2025-10-13 19:41:44] 2025-10-13 17:41:10,263 | INFO     | . initial setup = 2 s
[2025-10-13 19:41:44] 2025-10-13 17:41:10,263 | INFO     | . payload setup = 3 s
[2025-10-13 19:41:44] 2025-10-13 17:41:10,263 | INFO     | . stage-in = 0 s
[2025-10-13 19:41:44] 2025-10-13 17:41:10,264 | INFO     | . payload execution = 5474 s
[2025-10-13 19:41:44] 2025-10-13 17:41:10,264 | INFO     | . stage-out = 0 s
[2025-10-13 19:41:44] 2025-10-13 17:41:10,264 | INFO     | . log creation = 0 s
[2025-10-13 19:41:44] 2025-10-13 17:41:10,264 | INFO     | ..............................
[2025-10-13 19:41:44] 2025-10-13 17:41:10,731 | INFO     | 
[2025-10-13 19:41:44] 2025-10-13 17:41:10,731 | INFO     | job summary report
[2025-10-13 19:41:44] 2025-10-13 17:41:10,731 | INFO     | --------------------------------------------------
[2025-10-13 19:41:44] 2025-10-13 17:41:10,731 | INFO     | PanDA job id: 6841069404
[2025-10-13 19:41:44] 2025-10-13 17:41:10,731 | INFO     | task id: 46676269
[2025-10-13 19:41:44] 2025-10-13 17:41:10,731 | INFO     | errors: (none)
[2025-10-13 19:41:44] 2025-10-13 17:41:10,731 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 19:41:44] 2025-10-13 17:41:10,731 | INFO     | pilot state: finished 
[2025-10-13 19:41:44] 2025-10-13 17:41:10,731 | INFO     | transexitcode: 0
[2025-10-13 19:41:44] 2025-10-13 17:41:10,731 | INFO     | exeerrorcode: 0
[2025-10-13 19:41:44] 2025-10-13 17:41:10,731 | INFO     | exeerrordiag: 
[2025-10-13 19:41:44] 2025-10-13 17:41:10,731 | INFO     | exitcode: 0
[2025-10-13 19:41:44] 2025-10-13 17:41:10,731 | INFO     | exitmsg: OK
[2025-10-13 19:41:44] 2025-10-13 17:41:10,731 | INFO     | cpuconsumptiontime: 15807 s
[2025-10-13 19:41:44] 2025-10-13 17:41:10,731 | INFO     | nevents: 400
[2025-10-13 19:41:44] 2025-10-13 17:41:10,731 | INFO     | neventsw: 0
[2025-10-13 19:41:44] 2025-10-13 17:41:10,732 | INFO     | pid: 93264
[2025-10-13 19:41:44] 2025-10-13 17:41:10,732 | INFO     | pgrp: 93264
[2025-10-13 19:41:44] 2025-10-13 17:41:10,732 | INFO     | corecount: 3
[2025-10-13 19:41:44] 2025-10-13 17:41:10,732 | INFO     | event service: False
[2025-10-13 19:41:44] 2025-10-13 17:41:10,732 | INFO     | sizes: {0: 2348746, 1: 2348860, 3: 2349150, 11: 2349178, 5481: 2375899, 5482: 2385087, 5486: 2385225}
[2025-10-13 19:41:44] 2025-10-13 17:41:10,732 | INFO     | --------------------------------------------------
[2025-10-13 19:41:44] 2025-10-13 17:41:10,732 | INFO     | 
[2025-10-13 19:41:44] 2025-10-13 17:41:10,732 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-10-13 19:41:44] 2025-10-13 17:41:10,748 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 19:41:44] 2025-10-13 17:41:10,748 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 19:41:44] 2025-10-13 17:41:10,748 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 19:41:44] 2025-10-13 17:41:10,748 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 19:41:44] 2025-10-13 17:41:10,748 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 19:41:44] 2025-10-13 17:41:10,748 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 19:41:44] 2025-10-13 17:41:10,749 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 19:41:44] 2025-10-13 17:41:10,749 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 19:41:44] 2025-10-13 17:41:10,749 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 19:41:44] 2025-10-13 17:41:10,749 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 19:41:44] 2025-10-13 17:41:10,749 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 19:41:44] 2025-10-13 17:41:10,749 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 19:41:44] 2025-10-13 17:41:10,749 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 19:41:44] 2025-10-13 17:41:10,749 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 19:41:44] 2025-10-13 17:41:10,749 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 19:41:44] 2025-10-13 17:41:10,749 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 19:41:44] 2025-10-13 17:41:10,749 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 19:41:44] 2025-10-13 17:41:10,749 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 19:41:44] 2025-10-13 17:41:10,749 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 19:41:44] 2025-10-13 17:41:10,749 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 19:41:44] 2025-10-13 17:41:10,749 | INFO     | job 6841069404 has completed (purged errors)
[2025-10-13 19:41:44] 2025-10-13 17:41:10,749 | INFO     | overall cleanup function is called
[2025-10-13 19:41:44] 2025-10-13 17:41:11,755 | INFO     | --- collectZombieJob: --- 10, [93264]
[2025-10-13 19:41:44] 2025-10-13 17:41:11,755 | INFO     | zombie collector waiting for pid 93264
[2025-10-13 19:41:44] 2025-10-13 17:41:11,755 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 19:41:44] 2025-10-13 17:41:11,755 | INFO     | collected zombie processes
[2025-10-13 19:41:44] 2025-10-13 17:41:11,755 | INFO     | will attempt to kill all subprocesses of pid=93264
[2025-10-13 19:41:44] 2025-10-13 17:41:11,815 | INFO     | process IDs to be killed: [93264] (in reverse order)
[2025-10-13 19:41:44] 2025-10-13 17:41:11,847 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 19:41:44] 2025-10-13 17:41:11,847 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 19:41:44] 2025-10-13 17:41:11,850 | INFO     | did not find any defunct processes belonging to 93264
[2025-10-13 19:41:44] 2025-10-13 17:41:11,851 | INFO     | did not find any defunct processes belonging to 93264
[2025-10-13 19:41:44] 2025-10-13 17:41:11,851 | INFO     | ready for new job
[2025-10-13 19:41:44] 2025-10-13 17:41:11,852 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 19:41:44] 2025-10-13 17:41:11,852 | INFO     | ***************************************
[2025-10-13 19:41:44] 2025-10-13 17:41:11,852 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 19:41:44] 2025-10-13 17:41:11,852 | INFO     | ***************************************
[2025-10-13 19:41:44] 2025-10-13 17:41:11,852 | INFO     | 
[2025-10-13 19:41:44] 2025-10-13 17:41:11,853 | INFO     | architecture information:
[2025-10-13 19:41:44] 2025-10-13 17:41:11,853 | INFO     | executing command: cat /etc/os-release
[2025-10-13 19:41:44] 2025-10-13 17:41:11,865 | INFO     | cat /etc/os-release:
[2025-10-13 19:41:44] NAME="CentOS Linux"
[2025-10-13 19:41:44] VERSION="7 (Core)"
[2025-10-13 19:41:44] ID="centos"
[2025-10-13 19:41:44] ID_LIKE="rhel fedora"
[2025-10-13 19:41:44] VERSION_ID="7"
[2025-10-13 19:41:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 19:41:44] ANSI_COLOR="0;31"
[2025-10-13 19:41:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 19:41:44] HOME_URL="https://www.centos.org/"
[2025-10-13 19:41:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 19:41:44] 
[2025-10-13 19:41:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 19:41:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 19:41:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 19:41:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 19:41:44] 
[2025-10-13 19:41:44] 2025-10-13 17:41:11,865 | INFO     | ***************************************
[2025-10-13 19:41:44] 2025-10-13 17:41:12,367 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-13 19:41:44] 2025-10-13 17:41:12,379 | INFO     | sufficient remaining disk space (384278986752 B)
[2025-10-13 19:41:44] 2025-10-13 17:41:12,380 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 19:41:44] 2025-10-13 17:41:12,380 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 19:41:44] 2025-10-13 17:41:12,380 | INFO     | update_server=False
[2025-10-13 19:41:44] 2025-10-13 17:41:12,380 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 19:41:44] 2025-10-13 17:41:12,380 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 19:41:44] 2025-10-13 17:41:12,380 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 19:41:44] 2025-10-13 17:41:12,749 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 19:41:44] 2025-10-13 17:41:12,749 | INFO     | aborting loop
[2025-10-13 19:41:44] 2025-10-13 17:41:13,202 | INFO     | all data control threads have been joined
[2025-10-13 19:41:44] 2025-10-13 17:41:13,245 | INFO     | all job control threads have been joined
[2025-10-13 19:41:44] 2025-10-13 17:41:13,385 | INFO     | [job] retrieve thread has finished
[2025-10-13 19:41:44] 2025-10-13 17:41:13,400 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 19:41:44] 2025-10-13 17:41:13,533 | INFO     | all payload control threads have been joined
[2025-10-13 19:41:44] 2025-10-13 17:41:13,754 | INFO     | [job] job monitor thread has finished
[2025-10-13 19:41:44] 2025-10-13 17:41:13,798 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 19:41:44] 2025-10-13 17:41:13,803 | INFO     | [payload] failed_post thread has finished
[2025-10-13 19:41:44] 2025-10-13 17:41:14,207 | INFO     | [data] control thread has finished
[2025-10-13 19:41:44] 2025-10-13 17:41:14,250 | INFO     | [job] control thread has finished
[2025-10-13 19:41:44] 2025-10-13 17:41:14,333 | INFO     | [payload] validate_post thread has finished
[2025-10-13 19:41:44] 2025-10-13 17:41:14,385 | INFO     | [data] copytool_out thread has finished
[2025-10-13 19:41:44] 2025-10-13 17:41:14,435 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 19:41:44] 2025-10-13 17:41:14,538 | INFO     | [payload] control thread has finished
[2025-10-13 19:41:44] 2025-10-13 17:41:14,781 | INFO     | [job] validate thread has finished
[2025-10-13 19:41:44] 2025-10-13 17:41:14,832 | INFO     | [data] copytool_in thread has finished
[2025-10-13 19:41:44] 2025-10-13 17:41:14,840 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 19:41:44] 2025-10-13 17:41:15,306 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 19:41:44] 2025-10-13 17:41:16,311 | INFO     | [job] queue monitor thread has finished
[2025-10-13 19:41:44] 2025-10-13 17:41:16,385 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 19:41:44] 2025-10-13 17:41:38,612 | INFO     | [monitor] cgroup control has ended
[2025-10-13 19:41:44] 2025-10-13 17:41:39,765 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140031246952256)>', '<ExcThread(monitor, started 140030580332288)>']
[2025-10-13 19:41:44] 2025-10-13 17:41:42,789 | INFO     | PID=86829 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-13 19:41:44] 2025-10-13 17:41:42,790 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 19:41:44] 2025-10-13 17:41:42,790 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 19:41:44] 2025-10-13 17:41:42,790 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 19:41:44] 2025-10-13 17:41:42,790 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 19:41:44] 2025-10-13 17:41:42,790 | INFO     | [monitor] control thread has ended
[2025-10-13 19:41:44] 2025-10-13 17:41:44,790 | INFO     | all workflow threads have been joined
[2025-10-13 19:41:44] 2025-10-13 17:41:44,790 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 19:41:44] 2025-10-13 17:41:44,790 | INFO     | traces error code: 0
[2025-10-13 19:41:44] 2025-10-13 17:41:44,790 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 19:41:44] 2025-10-13 17:41:44,858 [wrapper] ==== pilot stdout END ====
[2025-10-13 19:41:44] 2025-10-13 17:41:44,861 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 19:41:44] 2025-10-13 17:41:44,864 [wrapper] pilotpid: 86829
[2025-10-13 19:41:44] 2025-10-13 17:41:44,867 [wrapper] Pilot exit status: 0
[2025-10-13 19:41:44] 2025-10-13 17:41:44,876 [wrapper] pandaids: 6841069404
[2025-10-13 19:41:44] 2025-10-13 17:41:44,898 [wrapper] cleanup supervisor_pilot  105994 86830
[2025-10-13 19:41:44] 2025-10-13 17:41:44,901 [wrapper] Test setup, not cleaning
[2025-10-13 19:41:44] 2025-10-13 17:41:44,904 [wrapper] apfmon messages muted
[2025-10-13 19:41:44] 2025-10-13 17:41:44,907 [wrapper] ==== wrapper stdout END ====
[2025-10-13 19:41:44] 2025-10-13 17:41:44,910 [wrapper] ==== wrapper stderr END ====
[2025-10-13 19:41:44]  *** Error codes and diagnostics ***
[2025-10-13 19:41:44]     "exeErrorCode": 0,
[2025-10-13 19:41:44]     "exeErrorDiag": "",
[2025-10-13 19:41:44]     "pilotErrorCode": 0,
[2025-10-13 19:41:44]     "pilotErrorDiag": "",
[2025-10-13 19:41:44]  *** Listing of results directory ***
[2025-10-13 19:41:44] total 406216
[2025-10-13 19:41:44] -rw-r--r-- 1 boinc boinc    557409 Oct 13 02:48 pilot3.tar.gz
[2025-10-13 19:41:44] -rw-r--r-- 1 boinc boinc      5112 Oct 13 02:53 queuedata.json
[2025-10-13 19:41:44] -rwx------ 1 boinc boinc     36292 Oct 13 02:53 runpilot2-wrapper.sh
[2025-10-13 19:41:44] -rw-r--r-- 1 boinc boinc       100 Oct 13 18:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 19:41:44] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 18:09 run_atlas
[2025-10-13 19:41:44] -rw-r--r-- 1 boinc boinc       105 Oct 13 18:09 job.xml
[2025-10-13 19:41:44] -rw-r--r-- 2 boinc boinc 221647353 Oct 13 18:09 EVNT.46676267._004708.pool.root.1
[2025-10-13 19:41:44] -rw-r--r-- 2 boinc boinc    569678 Oct 13 18:09 input.tar.gz
[2025-10-13 19:41:44] -rw-r--r-- 2 boinc boinc     15120 Oct 13 18:09 start_atlas.sh
[2025-10-13 19:41:44] drwxrwx--x 2 boinc boinc      4096 Oct 13 18:09 shared
[2025-10-13 19:41:44] -rw-r--r-- 1 boinc boinc         0 Oct 13 18:09 boinc_setup_complete
[2025-10-13 19:41:44] -rw-r--r-- 1 boinc boinc      6450 Oct 13 18:09 init_data.xml
[2025-10-13 19:41:44] -rw-r--r-- 1 boinc boinc         0 Oct 13 18:09 boinc_lockfile
[2025-10-13 19:41:44] -rw-r--r-- 1 boinc boinc      2550 Oct 13 18:09 pandaJob.out
[2025-10-13 19:41:44] -rw------- 1 boinc boinc    972783 Oct 13 18:09 agis_schedconf.cvmfs.json
[2025-10-13 19:41:44] -rw------- 1 boinc boinc   1560580 Oct 13 18:09 agis_ddmendpoints.agis.ALL.json
[2025-10-13 19:41:44] drwx------ 5 boinc boinc      4096 Oct 13 18:09 pilot3
[2025-10-13 19:41:44] -rw------- 1 boinc boinc 188293751 Oct 13 19:40 HITS.46676269._093536.pool.root.1
[2025-10-13 19:41:44] -rw-r--r-- 1 boinc boinc       529 Oct 13 19:40 boinc_task_state.xml
[2025-10-13 19:41:44] -rw------- 1 boinc boinc      1014 Oct 13 19:41 memory_monitor_summary.json
[2025-10-13 19:41:44] -rw------- 1 boinc boinc        95 Oct 13 19:41 pilot_heartbeat.json
[2025-10-13 19:41:44] -rw------- 1 boinc boinc    259731 Oct 13 19:41 log.46676269._093536.job.log.tgz.1
[2025-10-13 19:41:44] -rw------- 1 boinc boinc      7762 Oct 13 19:41 heartbeat.json
[2025-10-13 19:41:44] -rw-r--r-- 1 boinc boinc        27 Oct 13 19:41 wrapper_checkpoint.txt
[2025-10-13 19:41:44] -rw-r--r-- 1 boinc boinc      8192 Oct 13 19:41 boinc_mmap_file
[2025-10-13 19:41:44] -rw------- 1 boinc boinc      4750 Oct 13 19:41 pilotlog.txt
[2025-10-13 19:41:44] -rw------- 1 boinc boinc    800100 Oct 13 19:41 log.46676269._093536.job.log.1
[2025-10-13 19:41:44] -rw------- 1 boinc boinc       357 Oct 13 19:41 output.list
[2025-10-13 19:41:44] -rw-r--r-- 1 boinc boinc       620 Oct 13 19:41 runtime_log
[2025-10-13 19:41:44] -rw------- 1 boinc boinc   1075200 Oct 13 19:41 result.tar.gz
[2025-10-13 19:41:44] -rw-r--r-- 1 boinc boinc      8792 Oct 13 19:41 runtime_log.err
[2025-10-13 19:41:44] -rw------- 1 boinc boinc       663 Oct 13 19:41 b0lNDmqzLS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmcGmNDmm62r2n.diag
[2025-10-13 19:41:44] -rw-r--r-- 1 boinc boinc     21539 Oct 13 19:41 stderr.txt
[2025-10-13 19:41:44] HITS file was successfully produced:
[2025-10-13 19:41:44] -rw------- 1 boinc boinc 188293751 Oct 13 19:40 shared/HITS.pool.root.1
[2025-10-13 19:41:44]  *** Contents of shared directory: ***
[2025-10-13 19:41:44] total 401976
[2025-10-13 19:41:44] -rw-r--r-- 2 boinc boinc 221647353 Oct 13 18:09 ATLAS.root_0
[2025-10-13 19:41:44] -rw-r--r-- 2 boinc boinc    569678 Oct 13 18:09 input.tar.gz
[2025-10-13 19:41:44] -rw-r--r-- 2 boinc boinc     15120 Oct 13 18:09 start_atlas.sh
[2025-10-13 19:41:44] -rw------- 1 boinc boinc 188293751 Oct 13 19:40 HITS.pool.root.1
[2025-10-13 19:41:44] -rw------- 1 boinc boinc   1075200 Oct 13 19:41 result.tar.gz
19:41:46 (83119): run_atlas exited; CPU time 15827.903912
19:41:46 (83119): called boinc_finish(0)

</stderr_txt>
]]>

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