Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
01:59:33 (5180): wrapper (7.7.26015): starting
01:59:33 (5180): wrapper: running run_atlas (--nthreads 12)
[2025-10-13 01:59:33] Arguments: --nthreads 12
[2025-10-13 01:59:33] Threads: 12
[2025-10-13 01:59:33] Checking for CVMFS
[2025-10-13 01:59:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 01:59:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 01:59:33] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 01:59:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 01:59:33] 2.11.2.0 2925 223933 98884 151650 0 57 12238650 20275200 1 130560 1 109320883 99.985 12927610 12196 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 01:59:33] CVMFS is ok
[2025-10-13 01:59:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 01:59:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 01:59:33] Further information can be found at the LHC@home message board.
[2025-10-13 01:59:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 01:59:33] Checking for apptainer binary...
[2025-10-13 01:59:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 01:59:33] Running /usr/bin/apptainer --version
[2025-10-13 01:59:34] apptainer version 1.3.2-1.el7
[2025-10-13 01:59:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 01:59:35] c-205-10.aglt2.org
[2025-10-13 01:59:35] apptainer works
[2025-10-13 01:59:35] Set ATHENA_PROC_NUMBER=12
[2025-10-13 01:59:35] Set ATHENA_CORE_NUMBER=12
[2025-10-13 01:59:35] Starting ATLAS job with PandaID=6840715377
[2025-10-13 01:59:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 03:15:22]  *** The last 200 lines of the pilot log: ***
[2025-10-13 03:15:22]  storage_token=
[2025-10-13 03:15:22]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6840715377/log.46676269._088329.job.log.tgz.1
[2025-10-13 03:15:22]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4b/01/log.46676269._088329.job.log.tgz.1
[2025-10-13 03:15:22]  workdir=None
[2025-10-13 03:15:22] ]
[2025-10-13 03:15:22] 2025-10-13 07:14:41,555 | INFO     | transferring file log.46676269._088329.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6840715377/log.46676269._088329.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-13 03:15:22] 2025-10-13 07:14:41,555 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6840715377/log.46676269._088329.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._088329.job
[2025-10-13 03:15:22] 2025-10-13 07:14:41,576 | INFO     | adding to output.list: log.46676269._088329.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4b/01/log.46676269._088329.job.log.tg
[2025-10-13 03:15:22] 2025-10-13 07:14:41,577 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 03:15:22] 2025-10-13 07:14:41,577 | INFO     | summary of transferred files:
[2025-10-13 03:15:22] 2025-10-13 07:14:41,577 | INFO     |  -- lfn=log.46676269._088329.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 03:15:22] 2025-10-13 07:14:41,577 | INFO     | stage-out finished correctly
[2025-10-13 03:15:22] 2025-10-13 07:14:42,937 | INFO     | time since job start (4492s) is within the limit (172800.0s)
[2025-10-13 03:15:22] 2025-10-13 07:14:43,900 | INFO     | monitor loop #336: job 0:6840715377 is in state 'finished'
[2025-10-13 03:15:22] 2025-10-13 07:14:43,900 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 03:15:22] 2025-10-13 07:14:44,369 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 03:15:22] 2025-10-13 07:14:44,709 | INFO     | job 6840715377 has state=finished
[2025-10-13 03:15:22] 2025-10-13 07:14:44,709 | INFO     | preparing for final server update for job 6840715377 in state='finished'
[2025-10-13 03:15:22] 2025-10-13 07:14:44,710 | INFO     | this job has now completed (state=finished)
[2025-10-13 03:15:22] 2025-10-13 07:14:44,710 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 03:15:22] 2025-10-13 07:14:44,710 | INFO     | log transfer has been attempted: DONE
[2025-10-13 03:15:22] 2025-10-13 07:14:44,711 | INFO     | job 6840715377 has finished - writing final server update
[2025-10-13 03:15:22] 2025-10-13 07:14:44,711 | INFO     | total number of processed events: 400 (read)
[2025-10-13 03:15:22] 2025-10-13 07:14:44,712 | INFO     | executing command: lscpu
[2025-10-13 03:15:22] 2025-10-13 07:14:44,736 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 03:15:22] 2025-10-13 07:14:44,942 | INFO     | time since job start (4494s) is within the limit (172800.0s)
[2025-10-13 03:15:22] 2025-10-13 07:14:46,403 | INFO     | monitor loop #337: job 0:6840715377 is in state 'finished'
[2025-10-13 03:15:22] 2025-10-13 07:14:46,403 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 03:15:22] 2025-10-13 07:14:46,948 | INFO     | time since job start (4496s) is within the limit (172800.0s)
[2025-10-13 03:15:22] 2025-10-13 07:14:47,544 [wrapper] supervise_pilot (15 min periods counter: 6)
[2025-10-13 03:15:22] 2025-10-13 07:14:48,906 | INFO     | monitor loop #338: job 0:6840715377 is in state 'finished'
[2025-10-13 03:15:22] 2025-10-13 07:14:48,906 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 03:15:22] 2025-10-13 07:14:48,954 | INFO     | time since job start (4498s) is within the limit (172800.0s)
[2025-10-13 03:15:22] 2025-10-13 07:14:49,418 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-13 03:15:22] 2025-10-13 07:14:49,422 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1806.75
[2025-10-13 03:15:22] 2025-10-13 07:14:49,425 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6840715377/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 03:15:22] 2025-10-13 07:14:49,426 | INFO     | extracted standard info from prmon json
[2025-10-13 03:15:22] 2025-10-13 07:14:49,426 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 03:15:22] 2025-10-13 07:14:49,426 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 03:15:22] 2025-10-13 07:14:49,426 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 03:15:22] 2025-10-13 07:14:49,427 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 03:15:22] 2025-10-13 07:14:49,428 | INFO     | fitting pss+swap vs Time
[2025-10-13 03:15:22] 2025-10-13 07:14:49,429 | INFO     | sum of square deviations: 93240818.0
[2025-10-13 03:15:22] 2025-10-13 07:14:49,429 | INFO     | sum of deviations: -5676232878.0
[2025-10-13 03:15:22] 2025-10-13 07:14:49,429 | INFO     | mean x: 1760337537.0
[2025-10-13 03:15:22] 2025-10-13 07:14:49,429 | INFO     | mean y: 2785418.537313433
[2025-10-13 03:15:22] 2025-10-13 07:14:49,429 | INFO     | -- intersect: 107167072671.96898
[2025-10-13 03:15:22] 2025-10-13 07:14:49,430 | INFO     | intersect: 107167072671.96898
[2025-10-13 03:15:22] 2025-10-13 07:14:49,430 | INFO     | chi2: 0.15224212184771535
[2025-10-13 03:15:22] 2025-10-13 07:14:49,430 | INFO     | -- intersect: 107167072671.96898
[2025-10-13 03:15:22] 2025-10-13 07:14:49,430 | INFO     | current memory leak: -60.88 B/s (using 67 data points, chi2=0.15)
[2025-10-13 03:15:22] 2025-10-13 07:14:49,430 | INFO     | could have reported an average CPU frequency of 2065 MHz (6 samples)
[2025-10-13 03:15:22] 2025-10-13 07:14:49,431 | INFO     | ..............................
[2025-10-13 03:15:22] 2025-10-13 07:14:49,431 | INFO     | . Timing measurements:
[2025-10-13 03:15:22] 2025-10-13 07:14:49,431 | INFO     | . get job = 0 s
[2025-10-13 03:15:22] 2025-10-13 07:14:49,431 | INFO     | . initial setup = 2 s
[2025-10-13 03:15:22] 2025-10-13 07:14:49,431 | INFO     | . payload setup = 7 s
[2025-10-13 03:15:22] 2025-10-13 07:14:49,431 | INFO     | . stage-in = 0 s
[2025-10-13 03:15:22] 2025-10-13 07:14:49,431 | INFO     | . payload execution = 4463 s
[2025-10-13 03:15:22] 2025-10-13 07:14:49,431 | INFO     | . stage-out = 0 s
[2025-10-13 03:15:22] 2025-10-13 07:14:49,432 | INFO     | . log creation = 0 s
[2025-10-13 03:15:22] 2025-10-13 07:14:49,432 | INFO     | ..............................
[2025-10-13 03:15:22] 2025-10-13 07:14:49,515 | INFO     | 
[2025-10-13 03:15:22] 2025-10-13 07:14:49,515 | INFO     | job summary report
[2025-10-13 03:15:22] 2025-10-13 07:14:49,515 | INFO     | --------------------------------------------------
[2025-10-13 03:15:22] 2025-10-13 07:14:49,516 | INFO     | PanDA job id: 6840715377
[2025-10-13 03:15:22] 2025-10-13 07:14:49,516 | INFO     | task id: 46676269
[2025-10-13 03:15:22] 2025-10-13 07:14:49,516 | INFO     | errors: (none)
[2025-10-13 03:15:22] 2025-10-13 07:14:49,516 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 03:15:22] 2025-10-13 07:14:49,516 | INFO     | pilot state: finished 
[2025-10-13 03:15:22] 2025-10-13 07:14:49,516 | INFO     | transexitcode: 0
[2025-10-13 03:15:22] 2025-10-13 07:14:49,516 | INFO     | exeerrorcode: 0
[2025-10-13 03:15:22] 2025-10-13 07:14:49,517 | INFO     | exeerrordiag: 
[2025-10-13 03:15:22] 2025-10-13 07:14:49,517 | INFO     | exitcode: 0
[2025-10-13 03:15:22] 2025-10-13 07:14:49,517 | INFO     | exitmsg: OK
[2025-10-13 03:15:22] 2025-10-13 07:14:49,517 | INFO     | cpuconsumptiontime: 47082 s
[2025-10-13 03:15:22] 2025-10-13 07:14:49,517 | INFO     | nevents: 400
[2025-10-13 03:15:22] 2025-10-13 07:14:49,517 | INFO     | neventsw: 0
[2025-10-13 03:15:22] 2025-10-13 07:14:49,517 | INFO     | pid: 15527
[2025-10-13 03:15:22] 2025-10-13 07:14:49,517 | INFO     | pgrp: 15527
[2025-10-13 03:15:22] 2025-10-13 07:14:49,518 | INFO     | corecount: 12
[2025-10-13 03:15:22] 2025-10-13 07:14:49,518 | INFO     | event service: False
[2025-10-13 03:15:22] 2025-10-13 07:14:49,518 | INFO     | sizes: {0: 2348856, 1: 2348856, 5: 2349146, 11: 2349202, 4474: 2375279, 4475: 2384277, 4478: 2384461, 4483: 2384655}
[2025-10-13 03:15:22] 2025-10-13 07:14:49,518 | INFO     | --------------------------------------------------
[2025-10-13 03:15:22] 2025-10-13 07:14:49,518 | INFO     | 
[2025-10-13 03:15:22] 2025-10-13 07:14:49,518 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 03:15:22] 2025-10-13 07:14:49,542 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 03:15:22] 2025-10-13 07:14:49,543 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 03:15:22] 2025-10-13 07:14:49,543 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 03:15:22] 2025-10-13 07:14:49,543 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 03:15:22] 2025-10-13 07:14:49,543 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 03:15:22] 2025-10-13 07:14:49,543 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 03:15:22] 2025-10-13 07:14:49,544 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 03:15:22] 2025-10-13 07:14:49,544 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 03:15:22] 2025-10-13 07:14:49,544 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 03:15:22] 2025-10-13 07:14:49,544 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 03:15:22] 2025-10-13 07:14:49,544 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 03:15:22] 2025-10-13 07:14:49,545 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 03:15:22] 2025-10-13 07:14:49,545 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 03:15:22] 2025-10-13 07:14:49,545 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 03:15:22] 2025-10-13 07:14:49,545 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 03:15:22] 2025-10-13 07:14:49,545 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 03:15:22] 2025-10-13 07:14:49,545 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 03:15:22] 2025-10-13 07:14:49,546 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 03:15:22] 2025-10-13 07:14:49,546 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 03:15:22] 2025-10-13 07:14:49,546 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 03:15:22] 2025-10-13 07:14:49,546 | INFO     | job 6840715377 has completed (purged errors)
[2025-10-13 03:15:22] 2025-10-13 07:14:49,546 | INFO     | overall cleanup function is called
[2025-10-13 03:15:22] 2025-10-13 07:14:50,554 | INFO     | --- collectZombieJob: --- 10, [15527]
[2025-10-13 03:15:22] 2025-10-13 07:14:50,554 | INFO     | zombie collector waiting for pid 15527
[2025-10-13 03:15:22] 2025-10-13 07:14:50,554 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 03:15:22] 2025-10-13 07:14:50,554 | INFO     | collected zombie processes
[2025-10-13 03:15:22] 2025-10-13 07:14:50,555 | INFO     | will attempt to kill all subprocesses of pid=15527
[2025-10-13 03:15:22] 2025-10-13 07:14:50,647 | INFO     | process IDs to be killed: [15527] (in reverse order)
[2025-10-13 03:15:22] 2025-10-13 07:14:50,743 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 03:15:22] 2025-10-13 07:14:50,743 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 03:15:22] 2025-10-13 07:14:50,747 | INFO     | did not find any defunct processes belonging to 15527
[2025-10-13 03:15:22] 2025-10-13 07:14:50,749 | INFO     | did not find any defunct processes belonging to 15527
[2025-10-13 03:15:22] 2025-10-13 07:14:50,749 | INFO     | ready for new job
[2025-10-13 03:15:22] 2025-10-13 07:14:50,749 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 03:15:22] 2025-10-13 07:14:50,751 | INFO     | ***************************************
[2025-10-13 03:15:22] 2025-10-13 07:14:50,751 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 03:15:22] 2025-10-13 07:14:50,751 | INFO     | ***************************************
[2025-10-13 03:15:22] 2025-10-13 07:14:50,751 | INFO     | 
[2025-10-13 03:15:22] 2025-10-13 07:14:50,751 | INFO     | architecture information:
[2025-10-13 03:15:22] 2025-10-13 07:14:50,752 | INFO     | executing command: cat /etc/os-release
[2025-10-13 03:15:22] 2025-10-13 07:14:50,766 | INFO     | cat /etc/os-release:
[2025-10-13 03:15:22] NAME="CentOS Linux"
[2025-10-13 03:15:22] VERSION="7 (Core)"
[2025-10-13 03:15:22] ID="centos"
[2025-10-13 03:15:22] ID_LIKE="rhel fedora"
[2025-10-13 03:15:22] VERSION_ID="7"
[2025-10-13 03:15:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 03:15:22] ANSI_COLOR="0;31"
[2025-10-13 03:15:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 03:15:22] HOME_URL="https://www.centos.org/"
[2025-10-13 03:15:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 03:15:22] 
[2025-10-13 03:15:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 03:15:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 03:15:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 03:15:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 03:15:22] 
[2025-10-13 03:15:22] 2025-10-13 07:14:50,767 | INFO     | ***************************************
[2025-10-13 03:15:22] 2025-10-13 07:14:51,270 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 03:15:22] 2025-10-13 07:14:51,287 | INFO     | sufficient remaining disk space (29360128000 B)
[2025-10-13 03:15:22] 2025-10-13 07:14:51,287 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 03:15:22] 2025-10-13 07:14:51,288 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 03:15:22] 2025-10-13 07:14:51,288 | INFO     | update_server=False
[2025-10-13 03:15:22] 2025-10-13 07:14:51,288 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 03:15:22] 2025-10-13 07:14:51,288 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 03:15:22] 2025-10-13 07:14:51,289 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 03:15:22] 2025-10-13 07:14:51,409 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 03:15:22] 2025-10-13 07:14:51,410 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 03:15:22] 2025-10-13 07:14:51,410 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 03:15:22] 2025-10-13 07:14:51,410 | INFO     | will abort loop
[2025-10-13 03:15:22] 2025-10-13 07:14:51,589 | INFO     | all payload control threads have been joined
[2025-10-13 03:15:22] 2025-10-13 07:14:52,179 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 03:15:22] 2025-10-13 07:14:52,243 | INFO     | all job control threads have been joined
[2025-10-13 03:15:22] 2025-10-13 07:14:52,257 | INFO     | all data control threads have been joined
[2025-10-13 03:15:22] 2025-10-13 07:14:52,294 | INFO     | [job] retrieve thread has finished
[2025-10-13 03:15:22] 2025-10-13 07:14:52,295 | INFO     | [job] queue monitor thread has finished
[2025-10-13 03:15:22] 2025-10-13 07:14:52,416 | INFO     | [job] job monitor thread has finished
[2025-10-13 03:15:22] 2025-10-13 07:14:52,595 | INFO     | [payload] control thread has finished
[2025-10-13 03:15:22] 2025-10-13 07:14:52,769 | INFO     | [data] copytool_in thread has finished
[2025-10-13 03:15:22] 2025-10-13 07:14:53,007 | INFO     | [payload] validate_post thread has finished
[2025-10-13 03:15:22] 2025-10-13 07:14:53,248 | INFO     | [job] control thread has finished
[2025-10-13 03:15:22] 2025-10-13 07:14:53,258 | INFO     | [payload] failed_post thread has finished
[2025-10-13 03:15:22] 2025-10-13 07:14:53,262 | INFO     | [data] control thread has finished
[2025-10-13 03:15:22] 2025-10-13 07:14:53,527 | INFO     | [job] validate thread has finished
[2025-10-13 03:15:22] 2025-10-13 07:14:53,722 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 03:15:22] 2025-10-13 07:14:53,725 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 03:15:22] 2025-10-13 07:14:53,756 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 03:15:22] 2025-10-13 07:14:54,184 | INFO     | [data] copytool_out thread has finished
[2025-10-13 03:15:22] 2025-10-13 07:14:55,295 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 03:15:22] 2025-10-13 07:14:57,362 | INFO     | [monitor] cgroup control has ended
[2025-10-13 03:15:22] 2025-10-13 07:15:02,104 | INFO     | job.realtimelogging is not enabled
[2025-10-13 03:15:22] 2025-10-13 07:15:03,109 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 03:15:22] 2025-10-13 07:15:04,664 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139935027619648)>', '<ExcThread(monitor, started 139934321075968)>']
[2025-10-13 03:15:22] 2025-10-13 07:15:09,687 | INFO     | all workflow threads have been joined
[2025-10-13 03:15:22] 2025-10-13 07:15:09,687 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 03:15:22] 2025-10-13 07:15:09,687 | INFO     | traces error code: 0
[2025-10-13 03:15:22] 2025-10-13 07:15:09,687 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 03:15:22] 2025-10-13 07:15:21,039 | INFO     | 4502s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-10-13 03:15:22] 2025-10-13 07:15:22,167 | INFO     | PID=8856 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-13 03:15:22] 2025-10-13 07:15:22,167 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 03:15:22] 2025-10-13 07:15:22,167 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 03:15:22] 2025-10-13 07:15:22,167 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 03:15:22] 2025-10-13 07:15:22,167 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 03:15:22] 2025-10-13 07:15:22,167 | INFO     | [monitor] control thread has ended
[2025-10-13 03:15:22] 2025-10-13 07:15:22,263 [wrapper] ==== pilot stdout END ====
[2025-10-13 03:15:22] 2025-10-13 07:15:22,267 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 03:15:22] 2025-10-13 07:15:22,271 [wrapper] pilotpid: 8856
[2025-10-13 03:15:22] 2025-10-13 07:15:22,274 [wrapper] Pilot exit status: 0
[2025-10-13 03:15:22] 2025-10-13 07:15:22,289 [wrapper] pandaids: 6840715377
[2025-10-13 03:15:22] 2025-10-13 07:15:22,328 [wrapper] cleanup supervisor_pilot  6261 8857
[2025-10-13 03:15:22] 2025-10-13 07:15:22,332 [wrapper] Test setup, not cleaning
[2025-10-13 03:15:22] 2025-10-13 07:15:22,336 [wrapper] apfmon messages muted
[2025-10-13 03:15:22] 2025-10-13 07:15:22,340 [wrapper] ==== wrapper stdout END ====
[2025-10-13 03:15:22] 2025-10-13 07:15:22,344 [wrapper] ==== wrapper stderr END ====
[2025-10-13 03:15:22]  *** Error codes and diagnostics ***
[2025-10-13 03:15:22]     "exeErrorCode": 0,
[2025-10-13 03:15:22]     "exeErrorDiag": "",
[2025-10-13 03:15:22]     "pilotErrorCode": 0,
[2025-10-13 03:15:22]     "pilotErrorDiag": "",
[2025-10-13 03:15:22]  *** Listing of results directory ***
[2025-10-13 03:15:22] total 416164
[2025-10-13 03:15:22] -rwx------ 1 boincer umatlas     36292 Oct 12 16:08 runpilot2-wrapper.sh
[2025-10-13 03:15:22] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 16:08 queuedata.json
[2025-10-13 03:15:22] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 16:08 pilot3.tar.gz
[2025-10-13 03:15:22] -rw-r--r-- 1 boincer umatlas       100 Oct 13 01:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 03:15:22] -rwxr-xr-x 1 boincer umatlas      7986 Oct 13 01:59 run_atlas
[2025-10-13 03:15:22] -rw-r--r-- 1 boincer umatlas       105 Oct 13 01:59 job.xml
[2025-10-13 03:15:22] -rw-r--r-- 2 boincer umatlas 220041501 Oct 13 01:59 EVNT.46676267._004487.pool.root.1
[2025-10-13 03:15:22] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 01:59 start_atlas.sh
[2025-10-13 03:15:22] drwxrwx--x 2 boincer umatlas      4096 Oct 13 01:59 shared
[2025-10-13 03:15:22] -rw-r--r-- 2 boincer umatlas    569672 Oct 13 01:59 input.tar.gz
[2025-10-13 03:15:22] -rw-r--r-- 1 boincer umatlas         0 Oct 13 01:59 boinc_lockfile
[2025-10-13 03:15:22] -rw-r--r-- 1 boincer umatlas      2549 Oct 13 01:59 pandaJob.out
[2025-10-13 03:15:22] -rw------- 1 boincer umatlas    973230 Oct 13 01:59 agis_schedconf.cvmfs.json
[2025-10-13 03:15:22] -rw------- 1 boincer umatlas   1560580 Oct 13 01:59 agis_ddmendpoints.agis.ALL.json
[2025-10-13 03:15:22] drwx------ 5 boincer umatlas      4096 Oct 13 01:59 pilot3
[2025-10-13 03:15:22] -rw-r--r-- 1 boincer umatlas      5953 Oct 13 03:10 init_data.xml
[2025-10-13 03:15:22] -rw------- 1 boincer umatlas 200114302 Oct 13 03:14 HITS.46676269._088329.pool.root.1
[2025-10-13 03:15:22] -rw-r--r-- 1 boincer umatlas       530 Oct 13 03:14 boinc_task_state.xml
[2025-10-13 03:15:22] -rw------- 1 boincer umatlas      1052 Oct 13 03:14 memory_monitor_summary.json
[2025-10-13 03:15:22] -rw------- 1 boincer umatlas    397555 Oct 13 03:14 log.46676269._088329.job.log.tgz.1
[2025-10-13 03:15:22] -rw------- 1 boincer umatlas        95 Oct 13 03:14 pilot_heartbeat.json
[2025-10-13 03:15:22] -rw------- 1 boincer umatlas      7859 Oct 13 03:14 heartbeat.json
[2025-10-13 03:15:22] -rw-r--r-- 1 boincer umatlas        27 Oct 13 03:15 wrapper_checkpoint.txt
[2025-10-13 03:15:22] -rw-r--r-- 1 boincer umatlas      8192 Oct 13 03:15 boinc_mmap_file
[2025-10-13 03:15:22] -rw------- 1 boincer umatlas       859 Oct 13 03:15 pilotlog.txt
[2025-10-13 03:15:22] -rw------- 1 boincer umatlas    653261 Oct 13 03:15 log.46676269._088329.job.log.1
[2025-10-13 03:15:22] -rw------- 1 boincer umatlas       357 Oct 13 03:15 output.list
[2025-10-13 03:15:22] -rw-r--r-- 1 boincer umatlas       620 Oct 13 03:15 runtime_log
[2025-10-13 03:15:22] -rw------- 1 boincer umatlas   1064960 Oct 13 03:15 result.tar.gz
[2025-10-13 03:15:22] -rw------- 1 boincer umatlas       659 Oct 13 03:15 tryNDm2XHS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmSOlNDm9ADHPo.diag
[2025-10-13 03:15:22] -rw-r--r-- 1 boincer umatlas      8705 Oct 13 03:15 runtime_log.err
[2025-10-13 03:15:22] -rw-r--r-- 1 boincer umatlas     22129 Oct 13 03:15 stderr.txt
[2025-10-13 03:15:22] HITS file was successfully produced:
[2025-10-13 03:15:22] -rw------- 1 boincer umatlas 200114302 Oct 13 03:14 shared/HITS.pool.root.1
[2025-10-13 03:15:22]  *** Contents of shared directory: ***
[2025-10-13 03:15:22] total 411936
[2025-10-13 03:15:22] -rw-r--r-- 2 boincer umatlas 220041501 Oct 13 01:59 ATLAS.root_0
[2025-10-13 03:15:22] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 01:59 start_atlas.sh
[2025-10-13 03:15:22] -rw-r--r-- 2 boincer umatlas    569672 Oct 13 01:59 input.tar.gz
[2025-10-13 03:15:22] -rw------- 1 boincer umatlas 200114302 Oct 13 03:14 HITS.pool.root.1
[2025-10-13 03:15:22] -rw------- 1 boincer umatlas   1064960 Oct 13 03:15 result.tar.gz
03:15:23 (5180): run_atlas exited; CPU time 46992.393843
03:15:23 (5180): called boinc_finish(0)

</stderr_txt>
]]>

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