Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
02:20:44 (827443): wrapper (7.7.26015): starting
02:20:44 (827443): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 02:20:44] Arguments: --nthreads 8
[2025-10-13 02:20:44] Threads: 8
[2025-10-13 02:20:44] Checking for CVMFS
[2025-10-13 02:20:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 02:20:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 02:20:45] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 02:20:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 02:20:46] 2.13.2.0 2498914 130315 479216 151650 2 567 22777480 32935936 27255 16776704 0 243536062 99.609 244321573 20680 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-13 02:20:46] CVMFS is ok
[2025-10-13 02:20:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 02:20:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 02:20:46] Further information can be found at the LHC@home message board.
[2025-10-13 02:20:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 02:20:46] Checking for apptainer binary...
[2025-10-13 02:20:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 02:20:46] Running /usr/bin/apptainer --version
[2025-10-13 02:20:46] apptainer version 1.4.3-1.el9
[2025-10-13 02:20:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 02:20:47] c6-2-11-3.aglt2.org
[2025-10-13 02:20:47] apptainer works
[2025-10-13 02:20:47] Set ATHENA_PROC_NUMBER=8
[2025-10-13 02:20:47] Set ATHENA_CORE_NUMBER=8
[2025-10-13 02:20:47] Starting ATLAS job with PandaID=6841069614
[2025-10-13 02:20:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 09:23:10]  *** The last 200 lines of the pilot log: ***
[2025-10-13 09:23:10] 2025-10-13 13:22:26,989 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2576.193083333334
[2025-10-13 09:23:10] 2025-10-13 13:22:27,078 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6841069614/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 09:23:10] 2025-10-13 13:22:27,079 | INFO     | extracted standard info from prmon json
[2025-10-13 09:23:10] 2025-10-13 13:22:27,080 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 09:23:10] 2025-10-13 13:22:27,239 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 09:23:10] 2025-10-13 13:22:27,240 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 09:23:10] 2025-10-13 13:22:27,240 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 09:23:10] 2025-10-13 13:22:27,299 | INFO     | fitting pss+swap vs Time
[2025-10-13 09:23:10] 2025-10-13 13:22:27,300 | INFO     | sum of square deviations: 21528769095.406574
[2025-10-13 09:23:10] 2025-10-13 13:22:27,325 | INFO     | sum of deviations: 278672361430.635
[2025-10-13 09:23:10] 2025-10-13 13:22:27,325 | INFO     | mean x: 1760349190.4428225
[2025-10-13 09:23:10] 2025-10-13 13:22:27,325 | INFO     | mean y: 2112609.4525547447
[2025-10-13 09:23:10] 2025-10-13 13:22:27,325 | INFO     | -- intersect: -22784172276.099728
[2025-10-13 09:23:10] 2025-10-13 13:22:27,325 | INFO     | intersect: -22784172276.099728
[2025-10-13 09:23:10] 2025-10-13 13:22:27,326 | INFO     | chi2: 5.635673241345534
[2025-10-13 09:23:10] 2025-10-13 13:22:27,326 | INFO     | sum of square deviations: 20752502205.204563
[2025-10-13 09:23:10] 2025-10-13 13:22:27,367 | INFO     | sum of deviations: 297247274384.4313
[2025-10-13 09:23:10] 2025-10-13 13:22:27,367 | INFO     | mean x: 1760349037.9334974
[2025-10-13 09:23:10] 2025-10-13 13:22:27,367 | INFO     | mean y: 2116216.5344827585
[2025-10-13 09:23:10] 2025-10-13 13:22:27,367 | INFO     | -- intersect: -25212142204.78296
[2025-10-13 09:23:10] 2025-10-13 13:22:27,368 | INFO     | intersect: -25212142204.78296
[2025-10-13 09:23:10] 2025-10-13 13:22:27,372 | INFO     | chi2: 4.9842472115917245
[2025-10-13 09:23:10] 2025-10-13 13:22:27,373 | INFO     | current chi2=4.9842472115917245 (change=11.558974444697933 %)
[2025-10-13 09:23:10] 2025-10-13 13:22:27,373 | INFO     | right removable region: 405
[2025-10-13 09:23:10] 2025-10-13 13:22:27,373 | INFO     | sum of square deviations: 20752540891.913773
[2025-10-13 09:23:10] 2025-10-13 13:22:27,387 | INFO     | sum of deviations: 182209182766.00012
[2025-10-13 09:23:10] 2025-10-13 13:22:27,388 | INFO     | mean x: 1760349342.9482758
[2025-10-13 09:23:10] 2025-10-13 13:22:27,388 | INFO     | mean y: 2131535.4285714286
[2025-10-13 09:23:10] 2025-10-13 13:22:27,388 | INFO     | -- intersect: -15453894636.588346
[2025-10-13 09:23:10] 2025-10-13 13:22:27,388 | INFO     | intersect: -15453894636.588346
[2025-10-13 09:23:10] 2025-10-13 13:22:27,389 | INFO     | chi2: 2.8040967545083437
[2025-10-13 09:23:10] 2025-10-13 13:22:27,389 | INFO     | current chi2=2.8040967545083437 (change=50.24380168217743 %)
[2025-10-13 09:23:10] 2025-10-13 13:22:27,389 | INFO     | sum of square deviations: 19995295946.98746
[2025-10-13 09:23:10] 2025-10-13 13:22:27,417 | INFO     | sum of deviations: 134372645876.79288
[2025-10-13 09:23:10] 2025-10-13 13:22:27,417 | INFO     | mean x: 1760349495.4438903
[2025-10-13 09:23:10] 2025-10-13 13:22:27,417 | INFO     | mean y: 2141149.5685785534
[2025-10-13 09:23:10] 2025-10-13 13:22:27,417 | INFO     | -- intersect: -11827782248.304958
[2025-10-13 09:23:10] 2025-10-13 13:22:27,417 | INFO     | intersect: -11827782248.304958
[2025-10-13 09:23:10] 2025-10-13 13:22:27,418 | INFO     | chi2: 2.143103803506741
[2025-10-13 09:23:10] 2025-10-13 13:22:27,418 | INFO     | current chi2=2.143103803506741 (change=23.572401699009767 %)
[2025-10-13 09:23:10] 2025-10-13 13:22:27,418 | INFO     | left removable region: 20
[2025-10-13 09:23:10] 2025-10-13 13:22:27,419 | INFO     | sum of square deviations: 17696050988.285744
[2025-10-13 09:23:10] 2025-10-13 13:22:27,443 | INFO     | sum of deviations: 60515356863.28572
[2025-10-13 09:23:10] 2025-10-13 13:22:27,443 | INFO     | mean x: 1760349617.4285715
[2025-10-13 09:23:10] 2025-10-13 13:22:27,443 | INFO     | mean y: 2165223.9194805194
[2025-10-13 09:23:10] 2025-10-13 13:22:27,443 | INFO     | -- intersect: -6017719403.071986
[2025-10-13 09:23:10] 2025-10-13 13:22:27,443 | INFO     | intersect: -6017719403.071986
[2025-10-13 09:23:10] 2025-10-13 13:22:27,464 | INFO     | chi2: 0.18265278877175525
[2025-10-13 09:23:10] 2025-10-13 13:22:27,464 | INFO     | -- intersect: -6017719403.071986
[2025-10-13 09:23:10] 2025-10-13 13:22:27,464 | INFO     | current memory leak: 3.42 B/s (using 385 data points, chi2=0.18)
[2025-10-13 09:23:10] 2025-10-13 13:22:27,465 | INFO     | could have reported an average CPU frequency of 2579 MHz (17 samples)
[2025-10-13 09:23:10] 2025-10-13 13:22:27,465 | INFO     | ..............................
[2025-10-13 09:23:10] 2025-10-13 13:22:27,465 | INFO     | . Timing measurements:
[2025-10-13 09:23:10] 2025-10-13 13:22:27,466 | INFO     | . get job = 0 s
[2025-10-13 09:23:10] 2025-10-13 13:22:27,466 | INFO     | . initial setup = 8 s
[2025-10-13 09:23:10] 2025-10-13 13:22:27,466 | INFO     | . payload setup = 50 s
[2025-10-13 09:23:10] 2025-10-13 13:22:27,466 | INFO     | . stage-in = 0 s
[2025-10-13 09:23:10] 2025-10-13 13:22:27,466 | INFO     | . payload execution = 25053 s
[2025-10-13 09:23:10] 2025-10-13 13:22:27,466 | INFO     | . stage-out = 6 s
[2025-10-13 09:23:10] 2025-10-13 13:22:27,466 | INFO     | . log creation = 0 s
[2025-10-13 09:23:10] 2025-10-13 13:22:27,466 | INFO     | ..............................
[2025-10-13 09:23:10] 2025-10-13 13:22:28,672 | INFO     | 
[2025-10-13 09:23:10] 2025-10-13 13:22:28,673 | INFO     | job summary report
[2025-10-13 09:23:10] 2025-10-13 13:22:28,673 | INFO     | --------------------------------------------------
[2025-10-13 09:23:10] 2025-10-13 13:22:28,673 | INFO     | PanDA job id: 6841069614
[2025-10-13 09:23:10] 2025-10-13 13:22:28,673 | INFO     | task id: 46676269
[2025-10-13 09:23:10] 2025-10-13 13:22:28,673 | INFO     | errors: (none)
[2025-10-13 09:23:10] 2025-10-13 13:22:28,673 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 09:23:10] 2025-10-13 13:22:28,673 | INFO     | pilot state: finished 
[2025-10-13 09:23:10] 2025-10-13 13:22:28,673 | INFO     | transexitcode: 0
[2025-10-13 09:23:10] 2025-10-13 13:22:28,673 | INFO     | exeerrorcode: 0
[2025-10-13 09:23:10] 2025-10-13 13:22:28,673 | INFO     | exeerrordiag: 
[2025-10-13 09:23:10] 2025-10-13 13:22:28,674 | INFO     | exitcode: 0
[2025-10-13 09:23:10] 2025-10-13 13:22:28,674 | INFO     | exitmsg: OK
[2025-10-13 09:23:10] 2025-10-13 13:22:28,674 | INFO     | cpuconsumptiontime: 50172 s
[2025-10-13 09:23:10] 2025-10-13 13:22:28,674 | INFO     | nevents: 400
[2025-10-13 09:23:10] 2025-10-13 13:22:28,674 | INFO     | neventsw: 0
[2025-10-13 09:23:10] 2025-10-13 13:22:28,674 | INFO     | pid: 849398
[2025-10-13 09:23:10] 2025-10-13 13:22:28,674 | INFO     | pgrp: 849398
[2025-10-13 09:23:10] 2025-10-13 13:22:28,674 | INFO     | corecount: 8
[2025-10-13 09:23:10] 2025-10-13 13:22:28,674 | INFO     | event service: False
[2025-10-13 09:23:10] 2025-10-13 13:22:28,674 | INFO     | sizes: {0: 2347978, 1: 2348663, 3: 2348862, 4: 2348890, 16: 2348890, 27: 2348918, 37: 2349336, 38: 2349364, 25109: 2384749, 25110: 2384748, 25117: 2394138, 25146: 
[2025-10-13 09:23:10] 2025-10-13 13:22:28,674 | INFO     | --------------------------------------------------
[2025-10-13 09:23:10] 2025-10-13 13:22:28,674 | INFO     | 
[2025-10-13 09:23:10] 2025-10-13 13:22:28,674 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-13 09:23:10] 2025-10-13 13:22:28,893 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 09:23:10] 2025-10-13 13:22:28,894 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 09:23:10] 2025-10-13 13:22:28,894 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 09:23:10] 2025-10-13 13:22:28,894 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 09:23:10] 2025-10-13 13:22:28,894 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 09:23:10] 2025-10-13 13:22:28,894 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 09:23:10] 2025-10-13 13:22:28,894 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 09:23:10] 2025-10-13 13:22:28,894 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 09:23:10] 2025-10-13 13:22:28,894 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 09:23:10] 2025-10-13 13:22:28,894 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 09:23:10] 2025-10-13 13:22:28,895 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 09:23:10] 2025-10-13 13:22:28,895 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 09:23:10] 2025-10-13 13:22:28,895 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 09:23:10] 2025-10-13 13:22:28,895 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 09:23:10] 2025-10-13 13:22:28,895 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 09:23:10] 2025-10-13 13:22:28,895 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 09:23:10] 2025-10-13 13:22:28,895 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 09:23:10] 2025-10-13 13:22:28,895 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 09:23:10] 2025-10-13 13:22:28,895 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 09:23:10] 2025-10-13 13:22:28,895 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 09:23:10] 2025-10-13 13:22:28,895 | INFO     | job 6841069614 has completed (purged errors)
[2025-10-13 09:23:10] 2025-10-13 13:22:28,895 | INFO     | overall cleanup function is called
[2025-10-13 09:23:10] 2025-10-13 13:22:30,026 | INFO     | --- collectZombieJob: --- 10, [849398]
[2025-10-13 09:23:10] 2025-10-13 13:22:30,026 | INFO     | zombie collector waiting for pid 849398
[2025-10-13 09:23:10] 2025-10-13 13:22:30,154 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 09:23:10] 2025-10-13 13:22:30,154 | INFO     | collected zombie processes
[2025-10-13 09:23:10] 2025-10-13 13:22:30,154 | INFO     | will attempt to kill all subprocesses of pid=849398
[2025-10-13 09:23:10] 2025-10-13 13:22:33,014 | INFO     | PID=835779 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-13 09:23:10] 2025-10-13 13:22:33,019 | INFO     | .. there are 27 such processes running
[2025-10-13 09:23:10] 2025-10-13 13:22:34,853 | INFO     | process IDs to be killed: [849398] (in reverse order)
[2025-10-13 09:23:10] 2025-10-13 13:22:35,063 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 09:23:10] 2025-10-13 13:22:35,063 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 09:23:10] 2025-10-13 13:22:35,159 | INFO     | did not find any defunct processes belonging to 849398
[2025-10-13 09:23:10] 2025-10-13 13:22:35,236 | INFO     | did not find any defunct processes belonging to 849398
[2025-10-13 09:23:10] 2025-10-13 13:22:35,237 | INFO     | ready for new job
[2025-10-13 09:23:10] 2025-10-13 13:22:35,237 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 09:23:10] 2025-10-13 13:22:35,260 | INFO     | ***************************************
[2025-10-13 09:23:10] 2025-10-13 13:22:35,261 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 09:23:10] 2025-10-13 13:22:35,261 | INFO     | ***************************************
[2025-10-13 09:23:10] 2025-10-13 13:22:35,261 | INFO     | 
[2025-10-13 09:23:10] 2025-10-13 13:22:35,307 | INFO     | architecture information:
[2025-10-13 09:23:10] 2025-10-13 13:22:35,331 | INFO     | executing command: cat /etc/os-release
[2025-10-13 09:23:10] 2025-10-13 13:22:35,399 | INFO     | cat /etc/os-release:
[2025-10-13 09:23:10] NAME="CentOS Linux"
[2025-10-13 09:23:10] VERSION="7 (Core)"
[2025-10-13 09:23:10] ID="centos"
[2025-10-13 09:23:10] ID_LIKE="rhel fedora"
[2025-10-13 09:23:10] VERSION_ID="7"
[2025-10-13 09:23:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 09:23:10] ANSI_COLOR="0;31"
[2025-10-13 09:23:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 09:23:10] HOME_URL="https://www.centos.org/"
[2025-10-13 09:23:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 09:23:10] 
[2025-10-13 09:23:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 09:23:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 09:23:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 09:23:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 09:23:10] 
[2025-10-13 09:23:10] 2025-10-13 13:22:35,399 | INFO     | ***************************************
[2025-10-13 09:23:10] 2025-10-13 13:22:35,903 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-13 09:23:10] 2025-10-13 13:22:36,001 | INFO     | sufficient remaining disk space (73607938048 B)
[2025-10-13 09:23:10] 2025-10-13 13:22:36,001 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 09:23:10] 2025-10-13 13:22:36,001 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 09:23:10] 2025-10-13 13:22:36,001 | INFO     | update_server=False
[2025-10-13 09:23:10] 2025-10-13 13:22:36,001 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 09:23:10] 2025-10-13 13:22:36,002 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 09:23:10] 2025-10-13 13:22:36,045 | INFO     | all job control threads have been joined
[2025-10-13 09:23:10] 2025-10-13 13:22:36,330 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 09:23:10] 2025-10-13 13:22:36,330 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 09:23:10] 2025-10-13 13:22:36,343 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 09:23:10] 2025-10-13 13:22:36,343 | INFO     | will abort loop
[2025-10-13 09:23:10] 2025-10-13 13:22:36,964 | INFO     | all payload control threads have been joined
[2025-10-13 09:23:10] 2025-10-13 13:22:37,006 | INFO     | [job] retrieve thread has finished
[2025-10-13 09:23:10] 2025-10-13 13:22:37,023 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 09:23:10] 2025-10-13 13:22:37,052 | INFO     | [job] control thread has finished
[2025-10-13 09:23:10] 2025-10-13 13:22:37,071 | INFO     | all data control threads have been joined
[2025-10-13 09:23:10] 2025-10-13 13:22:37,263 | INFO     | [payload] validate_post thread has finished
[2025-10-13 09:23:10] 2025-10-13 13:22:37,311 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 09:23:10] 2025-10-13 13:22:37,349 | INFO     | [job] job monitor thread has finished
[2025-10-13 09:23:10] 2025-10-13 13:22:37,667 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 09:23:10] 2025-10-13 13:22:37,723 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 09:23:10] 2025-10-13 13:22:37,945 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 09:23:10] 2025-10-13 13:22:37,971 | INFO     | [payload] control thread has finished
[2025-10-13 09:23:10] 2025-10-13 13:22:38,031 | INFO     | [data] copytool_out thread has finished
[2025-10-13 09:23:10] 2025-10-13 13:22:38,077 | INFO     | [data] control thread has finished
[2025-10-13 09:23:10] 2025-10-13 13:22:38,146 | INFO     | [payload] failed_post thread has finished
[2025-10-13 09:23:10] 2025-10-13 13:22:38,163 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 09:23:10] 2025-10-13 13:22:38,475 | INFO     | [job] validate thread has finished
[2025-10-13 09:23:10] 2025-10-13 13:22:38,475 | INFO     | [data] copytool_in thread has finished
[2025-10-13 09:23:10] 2025-10-13 13:22:39,169 | INFO     | [job] queue monitor thread has finished
[2025-10-13 09:23:10] 2025-10-13 13:22:41,959 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 09:23:10] 2025-10-13 13:22:56,429 | INFO     | [monitor] cgroup control has ended
[2025-10-13 09:23:10] 2025-10-13 13:22:58,445 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139828737406784)>', '<ExcThread(monitor, started 139828029028096)>']
[2025-10-13 09:23:10] 2025-10-13 13:23:03,471 | INFO     | all workflow threads have been joined
[2025-10-13 09:23:10] 2025-10-13 13:23:03,471 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 09:23:10] 2025-10-13 13:23:03,471 | INFO     | traces error code: 0
[2025-10-13 09:23:10] 2025-10-13 13:23:03,472 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 09:23:10] 2025-10-13 13:23:08,269 | INFO     | PID=835779 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-13 09:23:10] 2025-10-13 13:23:08,270 | INFO     | .. there are 27 such processes running
[2025-10-13 09:23:10] 2025-10-13 13:23:08,276 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 09:23:10] 2025-10-13 13:23:08,276 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 09:23:10] 2025-10-13 13:23:08,276 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 09:23:10] 2025-10-13 13:23:08,276 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 09:23:10] 2025-10-13 13:23:08,276 | INFO     | [monitor] control thread has ended
[2025-10-13 09:23:10] 2025-10-13 13:23:09,437 [wrapper] ==== pilot stdout END ====
[2025-10-13 09:23:10] 2025-10-13 13:23:09,481 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 09:23:10] 2025-10-13 13:23:09,516 [wrapper] pilotpid: 835779
[2025-10-13 09:23:10] 2025-10-13 13:23:09,533 [wrapper] Pilot exit status: 0
[2025-10-13 09:23:10] 2025-10-13 13:23:09,629 [wrapper] pandaids: 6841069614
[2025-10-13 09:23:10] 2025-10-13 13:23:09,830 [wrapper] cleanup supervisor_pilot 2108109 835780
[2025-10-13 09:23:10] 2025-10-13 13:23:09,868 [wrapper] Test setup, not cleaning
[2025-10-13 09:23:10] 2025-10-13 13:23:09,885 [wrapper] apfmon messages muted
[2025-10-13 09:23:10] 2025-10-13 13:23:09,905 [wrapper] ==== wrapper stdout END ====
[2025-10-13 09:23:10] 2025-10-13 13:23:09,924 [wrapper] ==== wrapper stderr END ====
[2025-10-13 09:23:10]  *** Error codes and diagnostics ***
[2025-10-13 09:23:10]     "exeErrorCode": 0,
[2025-10-13 09:23:10]     "exeErrorDiag": "",
[2025-10-13 09:23:10]     "pilotErrorCode": 0,
[2025-10-13 09:23:10]     "pilotErrorDiag": "",
[2025-10-13 09:23:10]  *** Listing of results directory ***
[2025-10-13 09:23:10] total 413484
[2025-10-13 09:23:10] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 20:48 pilot3.tar.gz
[2025-10-13 09:23:10] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 20:57 queuedata.json
[2025-10-13 09:23:10] -rwx------. 1 boincer umatlas     36292 Oct 12 20:58 runpilot2-wrapper.sh
[2025-10-13 09:23:10] -rw-r--r--. 1 boincer umatlas       100 Oct 13 02:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 09:23:10] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 02:20 run_atlas
[2025-10-13 09:23:10] -rw-r--r--. 1 boincer umatlas       105 Oct 13 02:20 job.xml
[2025-10-13 09:23:10] -rw-r--r--. 2 boincer umatlas 221696383 Oct 13 02:20 EVNT.46676267._004713.pool.root.1
[2025-10-13 09:23:10] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 02:20 start_atlas.sh
[2025-10-13 09:23:10] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 02:20 shared
[2025-10-13 09:23:10] -rw-r--r--. 2 boincer umatlas    569684 Oct 13 02:20 input.tar.gz
[2025-10-13 09:23:10] -rw-r--r--. 1 boincer umatlas         0 Oct 13 02:20 boinc_lockfile
[2025-10-13 09:23:10] -rw-r--r--. 1 boincer umatlas      2549 Oct 13 02:20 pandaJob.out
[2025-10-13 09:23:10] -rw-------. 1 boincer umatlas    973230 Oct 13 02:22 agis_schedconf.cvmfs.json
[2025-10-13 09:23:10] drwx------. 5 boincer umatlas      4096 Oct 13 02:22 pilot3
[2025-10-13 09:23:10] -rw-r--r--. 1 boincer umatlas      6858 Oct 13 09:20 init_data.xml
[2025-10-13 09:23:10] -rw-------. 1 boincer umatlas 190289036 Oct 13 09:21 HITS.46676269._093654.pool.root.1
[2025-10-13 09:23:10] -rw-r--r--. 1 boincer umatlas       531 Oct 13 09:21 boinc_task_state.xml
[2025-10-13 09:23:10] -rw-------. 1 boincer umatlas      1048 Oct 13 09:21 memory_monitor_summary.json
[2025-10-13 09:23:10] -rw-------. 1 boincer umatlas   1560580 Oct 13 09:21 agis_ddmendpoints.agis.ALL.json
[2025-10-13 09:23:10] -rw-------. 1 boincer umatlas    594150 Oct 13 09:21 log.46676269._093654.job.log.tgz.1
[2025-10-13 09:23:10] -rw-------. 1 boincer umatlas      7842 Oct 13 09:22 heartbeat.json
[2025-10-13 09:23:10] -rw-------. 1 boincer umatlas        95 Oct 13 09:23 pilot_heartbeat.json
[2025-10-13 09:23:10] -rw-------. 1 boincer umatlas       822 Oct 13 09:23 pilotlog.txt
[2025-10-13 09:23:10] -rw-------. 1 boincer umatlas   3166201 Oct 13 09:23 log.46676269._093654.job.log.1
[2025-10-13 09:23:10] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 09:23 boinc_mmap_file
[2025-10-13 09:23:10] -rw-------. 1 boincer umatlas       357 Oct 13 09:23 output.list
[2025-10-13 09:23:10] -rw-r--r--. 1 boincer umatlas        28 Oct 13 09:23 wrapper_checkpoint.txt
[2025-10-13 09:23:10] -rw-r--r--. 1 boincer umatlas       620 Oct 13 09:23 runtime_log
[2025-10-13 09:23:10] -rw-------. 1 boincer umatlas   3778560 Oct 13 09:23 result.tar.gz
[2025-10-13 09:23:10] -rw-r--r--. 1 boincer umatlas      8709 Oct 13 09:23 runtime_log.err
[2025-10-13 09:23:10] -rw-------. 1 boincer umatlas       659 Oct 13 09:23 7yKLDmj4LS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmTImNDmAmazIm.diag
[2025-10-13 09:23:10] -rw-r--r--. 1 boincer umatlas     21331 Oct 13 09:23 stderr.txt
[2025-10-13 09:23:10] HITS file was successfully produced:
[2025-10-13 09:23:10] -rw-------. 1 boincer umatlas 190289036 Oct 13 09:21 shared/HITS.pool.root.1
[2025-10-13 09:23:10]  *** Contents of shared directory: ***
[2025-10-13 09:23:10] total 406612
[2025-10-13 09:23:10] -rw-r--r--. 2 boincer umatlas 221696383 Oct 13 02:20 ATLAS.root_0
[2025-10-13 09:23:10] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 02:20 start_atlas.sh
[2025-10-13 09:23:10] -rw-r--r--. 2 boincer umatlas    569684 Oct 13 02:20 input.tar.gz
[2025-10-13 09:23:10] -rw-------. 1 boincer umatlas 190289036 Oct 13 09:21 HITS.pool.root.1
[2025-10-13 09:23:10] -rw-------. 1 boincer umatlas   3778560 Oct 13 09:23 result.tar.gz
09:23:12 (827443): run_atlas exited; CPU time 51408.785599
09:23:12 (827443): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN