Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
02:02:46 (2790998): wrapper (7.7.26015): starting
02:02:46 (2790998): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 02:02:46] Arguments: --nthreads 8
[2025-10-13 02:02:46] Threads: 8
[2025-10-13 02:02:46] Checking for CVMFS
[2025-10-13 02:02:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 02:02:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 02:02:47] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 02:02:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 02:02:47] 2.13.2.0 4298 25405 223204 151650 0 187 25061148 32935936 3416 16776704 0 73970726 99.739 51616046 29840 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-13 02:02:47] CVMFS is ok
[2025-10-13 02:02:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 02:02:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 02:02:47] Further information can be found at the LHC@home message board.
[2025-10-13 02:02:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 02:02:47] Checking for apptainer binary...
[2025-10-13 02:02:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 02:02:47] Running /usr/bin/apptainer --version
[2025-10-13 02:02:47] apptainer version 1.4.3-1.el9
[2025-10-13 02:02:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 02:02:47] c-8-24.aglt2.org
[2025-10-13 02:02:47] apptainer works
[2025-10-13 02:02:47] Set ATHENA_PROC_NUMBER=8
[2025-10-13 02:02:47] Set ATHENA_CORE_NUMBER=8
[2025-10-13 02:02:47] Starting ATLAS job with PandaID=6840712946
[2025-10-13 02:02:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 03:45:13]  *** The last 200 lines of the pilot log: ***
[2025-10-13 03:45:13] 2025-10-13 07:44:21,811 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 03:45:13] 2025-10-13 07:44:21,811 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 03:45:13] 2025-10-13 07:44:21,813 | INFO     | fitting pss+swap vs Time
[2025-10-13 03:45:13] 2025-10-13 07:44:21,813 | INFO     | sum of square deviations: 310052325.0
[2025-10-13 03:45:13] 2025-10-13 07:44:21,813 | INFO     | sum of deviations: 2203063952.5000057
[2025-10-13 03:45:13] 2025-10-13 07:44:21,813 | INFO     | mean x: 1760338420.5
[2025-10-13 03:45:13] 2025-10-13 07:44:21,814 | INFO     | mean y: 2141587.03
[2025-10-13 03:45:13] 2025-10-13 07:44:21,814 | INFO     | -- intersect: -12505870144.229706
[2025-10-13 03:45:13] 2025-10-13 07:44:21,814 | INFO     | intersect: -12505870144.229706
[2025-10-13 03:45:13] 2025-10-13 07:44:21,814 | INFO     | chi2: 2.2683926146071105
[2025-10-13 03:45:13] 2025-10-13 07:44:21,814 | INFO     | sum of square deviations: 265828240.0
[2025-10-13 03:45:13] 2025-10-13 07:44:21,814 | INFO     | sum of deviations: 8171413478.0
[2025-10-13 03:45:13] 2025-10-13 07:44:21,814 | INFO     | mean x: 1760338268.0
[2025-10-13 03:45:13] 2025-10-13 07:44:21,814 | INFO     | mean y: 2161415.789473684
[2025-10-13 03:45:13] 2025-10-13 07:44:21,814 | INFO     | -- intersect: -54109666014.48797
[2025-10-13 03:45:13] 2025-10-13 07:44:21,815 | INFO     | intersect: -54109666014.48797
[2025-10-13 03:45:13] 2025-10-13 07:44:21,815 | INFO     | chi2: 1.6046894210129514
[2025-10-13 03:45:13] 2025-10-13 07:44:21,815 | INFO     | current chi2=1.6046894210129514 (change=29.258744245608188 %)
[2025-10-13 03:45:13] 2025-10-13 07:44:21,815 | INFO     | sum of square deviations: 226022842.5
[2025-10-13 03:45:13] 2025-10-13 07:44:21,815 | INFO     | sum of deviations: 7920927439.499999
[2025-10-13 03:45:13] 2025-10-13 07:44:21,815 | INFO     | mean x: 1760338115.5
[2025-10-13 03:45:13] 2025-10-13 07:44:21,815 | INFO     | mean y: 2160454.7
[2025-10-13 03:45:13] 2025-10-13 07:44:21,815 | INFO     | -- intersect: -61688553314.027466
[2025-10-13 03:45:13] 2025-10-13 07:44:21,815 | INFO     | intersect: -61688553314.027466
[2025-10-13 03:45:13] 2025-10-13 07:44:21,815 | INFO     | chi2: 1.60722252980944
[2025-10-13 03:45:13] 2025-10-13 07:44:21,816 | INFO     | current chi2=1.60722252980944 (change=-0.1578566396287197 %)
[2025-10-13 03:45:13] 2025-10-13 07:44:21,816 | INFO     | right removable region: 89
[2025-10-13 03:45:13] 2025-10-13 07:44:21,816 | INFO     | sum of square deviations: 265828240.0
[2025-10-13 03:45:13] 2025-10-13 07:44:21,816 | INFO     | sum of deviations: -12125384800.0
[2025-10-13 03:45:13] 2025-10-13 07:44:21,816 | INFO     | mean x: 1760338573.0
[2025-10-13 03:45:13] 2025-10-13 07:44:21,816 | INFO     | mean y: 2190140.5894736843
[2025-10-13 03:45:13] 2025-10-13 07:44:21,816 | INFO     | -- intersect: 80297581540.34402
[2025-10-13 03:45:13] 2025-10-13 07:44:21,816 | INFO     | intersect: 80297581540.34402
[2025-10-13 03:45:13] 2025-10-13 07:44:21,816 | INFO     | chi2: 0.7303069079353521
[2025-10-13 03:45:13] 2025-10-13 07:44:21,816 | INFO     | current chi2=0.7303069079353521 (change=67.80509232693642 %)
[2025-10-13 03:45:13] 2025-10-13 07:44:21,817 | INFO     | sum of square deviations: 226022842.5
[2025-10-13 03:45:13] 2025-10-13 07:44:21,817 | INFO     | sum of deviations: -11064033722.0
[2025-10-13 03:45:13] 2025-10-13 07:44:21,817 | INFO     | mean x: 1760338725.5
[2025-10-13 03:45:13] 2025-10-13 07:44:21,817 | INFO     | mean y: 2186032.466666667
[2025-10-13 03:45:13] 2025-10-13 07:44:21,817 | INFO     | -- intersect: 86172445664.85095
[2025-10-13 03:45:13] 2025-10-13 07:44:21,817 | INFO     | intersect: 86172445664.85095
[2025-10-13 03:45:13] 2025-10-13 07:44:21,817 | INFO     | chi2: 0.7297305671855432
[2025-10-13 03:45:13] 2025-10-13 07:44:21,817 | INFO     | current chi2=0.7297305671855432 (change=0.07891760895954228 %)
[2025-10-13 03:45:13] 2025-10-13 07:44:21,817 | INFO     | left removable region: 20
[2025-10-13 03:45:13] 2025-10-13 07:44:21,817 | INFO     | sum of square deviations: 101843770.0
[2025-10-13 03:45:13] 2025-10-13 07:44:21,818 | INFO     | sum of deviations: -2507677913.9999995
[2025-10-13 03:45:13] 2025-10-13 07:44:21,818 | INFO     | mean x: 1760338695.0
[2025-10-13 03:45:13] 2025-10-13 07:44:21,818 | INFO     | mean y: 2203276.5362318843
[2025-10-13 03:45:13] 2025-10-13 07:44:21,818 | INFO     | -- intersect: 43346655927.99524
[2025-10-13 03:45:13] 2025-10-13 07:44:21,818 | INFO     | intersect: 43346655927.99524
[2025-10-13 03:45:13] 2025-10-13 07:44:21,818 | INFO     | chi2: 0.02982478736292407
[2025-10-13 03:45:13] 2025-10-13 07:44:21,818 | INFO     | -- intersect: 43346655927.99524
[2025-10-13 03:45:13] 2025-10-13 07:44:21,818 | INFO     | current memory leak: -24.62 B/s (using 69 data points, chi2=0.03)
[2025-10-13 03:45:13] 2025-10-13 07:44:21,818 | INFO     | could have reported an average CPU frequency of 2754 MHz (7 samples)
[2025-10-13 03:45:13] 2025-10-13 07:44:21,819 | INFO     | ..............................
[2025-10-13 03:45:13] 2025-10-13 07:44:21,819 | INFO     | . Timing measurements:
[2025-10-13 03:45:13] 2025-10-13 07:44:21,819 | INFO     | . get job = 0 s
[2025-10-13 03:45:13] 2025-10-13 07:44:21,819 | INFO     | . initial setup = 2 s
[2025-10-13 03:45:13] 2025-10-13 07:44:21,819 | INFO     | . payload setup = 4 s
[2025-10-13 03:45:13] 2025-10-13 07:44:21,819 | INFO     | . stage-in = 0 s
[2025-10-13 03:45:13] 2025-10-13 07:44:21,819 | INFO     | . payload execution = 6052 s
[2025-10-13 03:45:13] 2025-10-13 07:44:21,819 | INFO     | . stage-out = 0 s
[2025-10-13 03:45:13] 2025-10-13 07:44:21,819 | INFO     | . log creation = 0 s
[2025-10-13 03:45:13] 2025-10-13 07:44:21,819 | INFO     | ..............................
[2025-10-13 03:45:13] 2025-10-13 07:44:22,310 | INFO     | 
[2025-10-13 03:45:13] 2025-10-13 07:44:22,311 | INFO     | job summary report
[2025-10-13 03:45:13] 2025-10-13 07:44:22,311 | INFO     | --------------------------------------------------
[2025-10-13 03:45:13] 2025-10-13 07:44:22,311 | INFO     | PanDA job id: 6840712946
[2025-10-13 03:45:13] 2025-10-13 07:44:22,311 | INFO     | task id: 46676269
[2025-10-13 03:45:13] 2025-10-13 07:44:22,311 | INFO     | errors: (none)
[2025-10-13 03:45:13] 2025-10-13 07:44:22,311 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 03:45:13] 2025-10-13 07:44:22,312 | INFO     | pilot state: finished 
[2025-10-13 03:45:13] 2025-10-13 07:44:22,312 | INFO     | transexitcode: 0
[2025-10-13 03:45:13] 2025-10-13 07:44:22,312 | INFO     | exeerrorcode: 0
[2025-10-13 03:45:13] 2025-10-13 07:44:22,312 | INFO     | exeerrordiag: 
[2025-10-13 03:45:13] 2025-10-13 07:44:22,312 | INFO     | exitcode: 0
[2025-10-13 03:45:13] 2025-10-13 07:44:22,312 | INFO     | exitmsg: OK
[2025-10-13 03:45:13] 2025-10-13 07:44:22,312 | INFO     | cpuconsumptiontime: 44678 s
[2025-10-13 03:45:13] 2025-10-13 07:44:22,312 | INFO     | nevents: 400
[2025-10-13 03:45:13] 2025-10-13 07:44:22,312 | INFO     | neventsw: 0
[2025-10-13 03:45:13] 2025-10-13 07:44:22,312 | INFO     | pid: 2801113
[2025-10-13 03:45:13] 2025-10-13 07:44:22,313 | INFO     | pgrp: 2801113
[2025-10-13 03:45:13] 2025-10-13 07:44:22,313 | INFO     | corecount: 8
[2025-10-13 03:45:13] 2025-10-13 07:44:22,313 | INFO     | event service: False
[2025-10-13 03:45:13] 2025-10-13 07:44:22,313 | INFO     | sizes: {0: 2348857, 4: 2349119, 11: 2349147, 6061: 2375989, 6062: 2384987, 6064: 2385043, 6070: 2385365}
[2025-10-13 03:45:13] 2025-10-13 07:44:22,313 | INFO     | --------------------------------------------------
[2025-10-13 03:45:13] 2025-10-13 07:44:22,313 | INFO     | 
[2025-10-13 03:45:13] 2025-10-13 07:44:22,313 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 03:45:13] 2025-10-13 07:44:22,333 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 03:45:13] 2025-10-13 07:44:22,333 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 03:45:13] 2025-10-13 07:44:22,333 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 03:45:13] 2025-10-13 07:44:22,333 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 03:45:13] 2025-10-13 07:44:22,333 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 03:45:13] 2025-10-13 07:44:22,333 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 03:45:13] 2025-10-13 07:44:22,334 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 03:45:13] 2025-10-13 07:44:22,334 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 03:45:13] 2025-10-13 07:44:22,334 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 03:45:13] 2025-10-13 07:44:22,334 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 03:45:13] 2025-10-13 07:44:22,334 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 03:45:13] 2025-10-13 07:44:22,334 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 03:45:13] 2025-10-13 07:44:22,334 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 03:45:13] 2025-10-13 07:44:22,334 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 03:45:13] 2025-10-13 07:44:22,335 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 03:45:13] 2025-10-13 07:44:22,335 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 03:45:13] 2025-10-13 07:44:22,335 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 03:45:13] 2025-10-13 07:44:22,335 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 03:45:13] 2025-10-13 07:44:22,335 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 03:45:13] 2025-10-13 07:44:22,335 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 03:45:13] 2025-10-13 07:44:22,335 | INFO     | job 6840712946 has completed (purged errors)
[2025-10-13 03:45:13] 2025-10-13 07:44:22,336 | INFO     | overall cleanup function is called
[2025-10-13 03:45:13] 2025-10-13 07:44:23,343 | INFO     | --- collectZombieJob: --- 10, [2801113]
[2025-10-13 03:45:13] 2025-10-13 07:44:23,343 | INFO     | zombie collector waiting for pid 2801113
[2025-10-13 03:45:13] 2025-10-13 07:44:23,343 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 03:45:13] 2025-10-13 07:44:23,343 | INFO     | collected zombie processes
[2025-10-13 03:45:13] 2025-10-13 07:44:23,343 | INFO     | will attempt to kill all subprocesses of pid=2801113
[2025-10-13 03:45:13] 2025-10-13 07:44:23,604 | INFO     | process IDs to be killed: [2801113] (in reverse order)
[2025-10-13 03:45:13] 2025-10-13 07:44:23,673 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 03:45:13] 2025-10-13 07:44:23,673 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 03:45:13] 2025-10-13 07:44:23,682 | INFO     | did not find any defunct processes belonging to 2801113
[2025-10-13 03:45:13] 2025-10-13 07:44:23,690 | INFO     | did not find any defunct processes belonging to 2801113
[2025-10-13 03:45:13] 2025-10-13 07:44:23,691 | INFO     | ready for new job
[2025-10-13 03:45:13] 2025-10-13 07:44:23,691 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 03:45:13] 2025-10-13 07:44:23,693 | INFO     | ***************************************
[2025-10-13 03:45:13] 2025-10-13 07:44:23,693 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 03:45:13] 2025-10-13 07:44:23,693 | INFO     | ***************************************
[2025-10-13 03:45:13] 2025-10-13 07:44:23,693 | INFO     | 
[2025-10-13 03:45:13] 2025-10-13 07:44:23,706 | INFO     | architecture information:
[2025-10-13 03:45:13] 2025-10-13 07:44:23,707 | INFO     | executing command: cat /etc/os-release
[2025-10-13 03:45:13] 2025-10-13 07:44:23,718 | INFO     | cat /etc/os-release:
[2025-10-13 03:45:13] NAME="CentOS Linux"
[2025-10-13 03:45:13] VERSION="7 (Core)"
[2025-10-13 03:45:13] ID="centos"
[2025-10-13 03:45:13] ID_LIKE="rhel fedora"
[2025-10-13 03:45:13] VERSION_ID="7"
[2025-10-13 03:45:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 03:45:13] ANSI_COLOR="0;31"
[2025-10-13 03:45:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 03:45:13] HOME_URL="https://www.centos.org/"
[2025-10-13 03:45:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 03:45:13] 
[2025-10-13 03:45:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 03:45:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 03:45:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 03:45:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 03:45:13] 
[2025-10-13 03:45:13] 2025-10-13 07:44:23,719 | INFO     | ***************************************
[2025-10-13 03:45:13] 2025-10-13 07:44:24,222 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 03:45:13] 2025-10-13 07:44:24,240 | INFO     | sufficient remaining disk space (74106011648 B)
[2025-10-13 03:45:13] 2025-10-13 07:44:24,241 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 03:45:13] 2025-10-13 07:44:24,241 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 03:45:13] 2025-10-13 07:44:24,241 | INFO     | update_server=False
[2025-10-13 03:45:13] 2025-10-13 07:44:24,241 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 03:45:13] 2025-10-13 07:44:25,053 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 03:45:13] 2025-10-13 07:44:25,053 | INFO     | aborting loop
[2025-10-13 03:45:13] 2025-10-13 07:44:25,073 | INFO     | all data control threads have been joined
[2025-10-13 03:45:13] 2025-10-13 07:44:25,090 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 03:45:13] 2025-10-13 07:44:25,105 | INFO     | all job control threads have been joined
[2025-10-13 03:45:13] 2025-10-13 07:44:25,246 | INFO     | [job] retrieve thread has finished
[2025-10-13 03:45:13] 2025-10-13 07:44:25,479 | INFO     | all payload control threads have been joined
[2025-10-13 03:45:13] 2025-10-13 07:44:25,608 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 03:45:13] 2025-10-13 07:44:25,818 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 03:45:13] 2025-10-13 07:44:26,022 | INFO     | [payload] failed_post thread has finished
[2025-10-13 03:45:13] 2025-10-13 07:44:26,058 | INFO     | [job] job monitor thread has finished
[2025-10-13 03:45:13] 2025-10-13 07:44:26,078 | INFO     | [data] control thread has finished
[2025-10-13 03:45:13] 2025-10-13 07:44:26,103 | INFO     | [job] validate thread has finished
[2025-10-13 03:45:13] 2025-10-13 07:44:26,109 | INFO     | [job] control thread has finished
[2025-10-13 03:45:13] 2025-10-13 07:44:26,247 | INFO     | [data] copytool_in thread has finished
[2025-10-13 03:45:13] 2025-10-13 07:44:26,451 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 03:45:13] 2025-10-13 07:44:26,484 | INFO     | [payload] control thread has finished
[2025-10-13 03:45:13] 2025-10-13 07:44:26,488 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 03:45:13] 2025-10-13 07:44:26,685 | INFO     | [payload] validate_post thread has finished
[2025-10-13 03:45:13] 2025-10-13 07:44:26,883 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 03:45:13] 2025-10-13 07:44:27,095 | INFO     | [data] copytool_out thread has finished
[2025-10-13 03:45:13] 2025-10-13 07:44:27,888 | INFO     | [job] queue monitor thread has finished
[2025-10-13 03:45:13] 2025-10-13 07:44:30,456 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 03:45:13] 2025-10-13 07:44:34,801 | INFO     | job.realtimelogging is not enabled
[2025-10-13 03:45:13] 2025-10-13 07:44:35,802 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 03:45:13] 2025-10-13 07:44:53,993 | INFO     | PID=2794704 has CPU usage=5.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 03:45:13] 2025-10-13 07:44:53,994 | INFO     | .. there are 5 such processes running
[2025-10-13 03:45:13] 2025-10-13 07:44:53,994 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 03:45:13] 2025-10-13 07:44:53,994 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 03:45:13] 2025-10-13 07:44:53,994 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 03:45:13] 2025-10-13 07:45:07,156 | INFO     | [monitor] cgroup control has ended
[2025-10-13 03:45:13] 2025-10-13 07:45:08,593 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140300955023168)>', '<ExcThread(monitor, started 140300458645248)>']
[2025-10-13 03:45:13] 2025-10-13 07:45:09,056 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 03:45:13] 2025-10-13 07:45:09,056 | INFO     | [monitor] control thread has ended
[2025-10-13 03:45:13] 2025-10-13 07:45:13,618 | INFO     | all workflow threads have been joined
[2025-10-13 03:45:13] 2025-10-13 07:45:13,618 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 03:45:13] 2025-10-13 07:45:13,618 | INFO     | traces error code: 0
[2025-10-13 03:45:13] 2025-10-13 07:45:13,619 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 03:45:13] 2025-10-13 07:45:13,730 [wrapper] ==== pilot stdout END ====
[2025-10-13 03:45:13] 2025-10-13 07:45:13,732 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 03:45:13] 2025-10-13 07:45:13,734 [wrapper] pilotpid: 2794704
[2025-10-13 03:45:13] 2025-10-13 07:45:13,736 [wrapper] Pilot exit status: 0
[2025-10-13 03:45:13] 2025-10-13 07:45:13,746 [wrapper] pandaids: 6840712946
[2025-10-13 03:45:13] 2025-10-13 07:45:13,793 [wrapper] cleanup supervisor_pilot 3037277 2794705
[2025-10-13 03:45:13] 2025-10-13 07:45:13,795 [wrapper] Test setup, not cleaning
[2025-10-13 03:45:13] 2025-10-13 07:45:13,797 [wrapper] apfmon messages muted
[2025-10-13 03:45:13] 2025-10-13 07:45:13,799 [wrapper] ==== wrapper stdout END ====
[2025-10-13 03:45:13] 2025-10-13 07:45:13,801 [wrapper] ==== wrapper stderr END ====
[2025-10-13 03:45:13]  *** Error codes and diagnostics ***
[2025-10-13 03:45:13]     "exeErrorCode": 0,
[2025-10-13 03:45:13]     "exeErrorDiag": "",
[2025-10-13 03:45:13]     "pilotErrorCode": 0,
[2025-10-13 03:45:13]     "pilotErrorDiag": "",
[2025-10-13 03:45:13]  *** Listing of results directory ***
[2025-10-13 03:45:13] total 414796
[2025-10-13 03:45:13] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 15:28 pilot3.tar.gz
[2025-10-13 03:45:13] -rwx------. 1 boincer umatlas     36292 Oct 12 15:29 runpilot2-wrapper.sh
[2025-10-13 03:45:13] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 15:29 queuedata.json
[2025-10-13 03:45:13] -rw-r--r--. 1 boincer umatlas       100 Oct 13 02:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 03:45:13] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 02:02 run_atlas
[2025-10-13 03:45:13] -rw-r--r--. 1 boincer umatlas       105 Oct 13 02:02 job.xml
[2025-10-13 03:45:13] -rw-r--r--. 2 boincer umatlas 220839248 Oct 13 02:02 EVNT.46676267._004453.pool.root.1
[2025-10-13 03:45:13] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 02:02 start_atlas.sh
[2025-10-13 03:45:13] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 02:02 shared
[2025-10-13 03:45:13] -rw-r--r--. 2 boincer umatlas    569673 Oct 13 02:02 input.tar.gz
[2025-10-13 03:45:13] -rw-r--r--. 1 boincer umatlas         0 Oct 13 02:02 boinc_lockfile
[2025-10-13 03:45:13] -rw-r--r--. 1 boincer umatlas      2550 Oct 13 02:02 pandaJob.out
[2025-10-13 03:45:13] -rw-------. 1 boincer umatlas    973230 Oct 13 02:02 agis_schedconf.cvmfs.json
[2025-10-13 03:45:13] -rw-------. 1 boincer umatlas   1560580 Oct 13 02:02 agis_ddmendpoints.agis.ALL.json
[2025-10-13 03:45:13] drwx------. 5 boincer umatlas      4096 Oct 13 02:02 pilot3
[2025-10-13 03:45:13] -rw-r--r--. 1 boincer umatlas      6660 Oct 13 03:38 init_data.xml
[2025-10-13 03:45:13] -rw-------. 1 boincer umatlas 197572561 Oct 13 03:43 HITS.46676269._087459.pool.root.1
[2025-10-13 03:45:13] -rw-r--r--. 1 boincer umatlas       529 Oct 13 03:43 boinc_task_state.xml
[2025-10-13 03:45:13] -rw-------. 1 boincer umatlas        95 Oct 13 03:43 pilot_heartbeat.json
[2025-10-13 03:45:13] -rw-------. 1 boincer umatlas      1030 Oct 13 03:44 memory_monitor_summary.json
[2025-10-13 03:45:13] -rw-------. 1 boincer umatlas    337399 Oct 13 03:44 log.46676269._087459.job.log.tgz.1
[2025-10-13 03:45:13] -rw-------. 1 boincer umatlas      7812 Oct 13 03:44 heartbeat.json
[2025-10-13 03:45:13] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 03:45 boinc_mmap_file
[2025-10-13 03:45:13] -rw-r--r--. 1 boincer umatlas        27 Oct 13 03:45 wrapper_checkpoint.txt
[2025-10-13 03:45:13] -rw-------. 1 boincer umatlas      4895 Oct 13 03:45 pilotlog.txt
[2025-10-13 03:45:13] -rw-------. 1 boincer umatlas    883768 Oct 13 03:45 log.46676269._087459.job.log.1
[2025-10-13 03:45:13] -rw-------. 1 boincer umatlas       357 Oct 13 03:45 output.list
[2025-10-13 03:45:13] -rw-r--r--. 1 boincer umatlas       620 Oct 13 03:45 runtime_log
[2025-10-13 03:45:13] -rw-------. 1 boincer umatlas   1239040 Oct 13 03:45 result.tar.gz
[2025-10-13 03:45:13] -rw-------. 1 boincer umatlas       650 Oct 13 03:45 ACcLDmwvGS8n9Rq4apOajLDm4fhM0noT9bVof3QYDm1oUMDm4hVfCn.diag
[2025-10-13 03:45:13] -rw-r--r--. 1 boincer umatlas      8693 Oct 13 03:45 runtime_log.err
[2025-10-13 03:45:13] -rw-r--r--. 1 boincer umatlas     20852 Oct 13 03:45 stderr.txt
[2025-10-13 03:45:13] HITS file was successfully produced:
[2025-10-13 03:45:13] -rw-------. 1 boincer umatlas 197572561 Oct 13 03:43 shared/HITS.pool.root.1
[2025-10-13 03:45:13]  *** Contents of shared directory: ***
[2025-10-13 03:45:13] total 410400
[2025-10-13 03:45:13] -rw-r--r--. 2 boincer umatlas 220839248 Oct 13 02:02 ATLAS.root_0
[2025-10-13 03:45:13] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 02:02 start_atlas.sh
[2025-10-13 03:45:13] -rw-r--r--. 2 boincer umatlas    569673 Oct 13 02:02 input.tar.gz
[2025-10-13 03:45:13] -rw-------. 1 boincer umatlas 197572561 Oct 13 03:43 HITS.pool.root.1
[2025-10-13 03:45:13] -rw-------. 1 boincer umatlas   1239040 Oct 13 03:45 result.tar.gz
03:45:15 (2790998): run_atlas exited; CPU time 44830.515178
03:45:15 (2790998): called boinc_finish(0)

</stderr_txt>
]]>

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