Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
17:30:20 (2597916): wrapper (7.7.26015): starting
17:30:20 (2597916): wrapper: running run_atlas (--nthreads 2)
[2025-10-13 17:30:20] Arguments: --nthreads 2
[2025-10-13 17:30:20] Threads: 2
[2025-10-13 17:30:20] Checking for CVMFS
[2025-10-13 17:30:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 17:30:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 17:30:21] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 17:30:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 17:30:21] 2.9.2.0 1210534 5936 59068 151666 0 56 28322755 36864000 0 130560 0 3638014 99.989 202004 770 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 17:30:21] CVMFS is ok
[2025-10-13 17:30:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 17:30:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 17:30:21] Further information can be found at the LHC@home message board.
[2025-10-13 17:30:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 17:30:21] Checking for apptainer binary...
[2025-10-13 17:30:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 17:30:21] Running /usr/bin/apptainer --version
[2025-10-13 17:30:21] apptainer version 1.4.1-1.1
[2025-10-13 17:30:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 17:30:21] thA369
[2025-10-13 17:30:21] apptainer works
[2025-10-13 17:30:21] Set ATHENA_PROC_NUMBER=2
[2025-10-13 17:30:21] Set ATHENA_CORE_NUMBER=2
[2025-10-13 17:30:21] Starting ATLAS job with PandaID=6841068729
[2025-10-13 17:30:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 19:33:52]  *** The last 200 lines of the pilot log: ***
[2025-10-13 19:33:52] 2025-10-13 17:32:55,625 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 19:33:52] 2025-10-13 17:32:55,625 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-13 19:33:52] 2025-10-13 17:32:55,626 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 19:33:52] 2025-10-13 17:32:55,626 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 19:33:52] 2025-10-13 17:32:55,626 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 19:33:52] 2025-10-13 17:32:55,627 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 19:33:52] 2025-10-13 17:32:55,939 | INFO     | all payload control threads have been joined
[2025-10-13 19:33:52] 2025-10-13 17:32:56,069 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 19:33:52] 2025-10-13 17:32:56,070 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 19:33:52] 2025-10-13 17:32:56,070 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 19:33:52] 2025-10-13 17:32:56,070 | INFO     | will abort loop
[2025-10-13 19:33:52] 2025-10-13 17:32:56,282 | INFO     | all data control threads have been joined
[2025-10-13 19:33:52] 2025-10-13 17:32:56,420 | INFO     | all job control threads have been joined
[2025-10-13 19:33:52] 2025-10-13 17:32:56,628 | INFO     | [job] queue monitor thread has finished
[2025-10-13 19:33:52] 2025-10-13 17:32:56,630 | INFO     | [job] retrieve thread has finished
[2025-10-13 19:33:52] 2025-10-13 17:32:56,779 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 19:33:52] 2025-10-13 17:32:56,816 | INFO     | [data] copytool_in thread has finished
[2025-10-13 19:33:52] 2025-10-13 17:32:56,944 | INFO     | [payload] control thread has finished
[2025-10-13 19:33:52] 2025-10-13 17:32:57,076 | INFO     | [job] job monitor thread has finished
[2025-10-13 19:33:52] 2025-10-13 17:32:57,117 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 19:33:52] 2025-10-13 17:32:57,117 | INFO     | [job] validate thread has finished
[2025-10-13 19:33:52] 2025-10-13 17:32:57,233 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 19:33:52] 2025-10-13 17:32:57,288 | INFO     | [data] control thread has finished
[2025-10-13 19:33:52] 2025-10-13 17:32:57,389 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 19:33:52] 2025-10-13 17:32:57,426 | INFO     | [job] control thread has finished
[2025-10-13 19:33:52] 2025-10-13 17:32:57,533 | INFO     | [payload] failed_post thread has finished
[2025-10-13 19:33:52] 2025-10-13 17:32:58,125 | INFO     | [payload] validate_post thread has finished
[2025-10-13 19:33:52] 2025-10-13 17:32:58,171 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 19:33:52] 2025-10-13 17:32:58,785 | INFO     | [data] copytool_out thread has finished
[2025-10-13 19:33:52] 2025-10-13 17:33:02,176 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 19:33:52] 2025-10-13 17:33:05,668 | INFO     | job.realtimelogging is not enabled
[2025-10-13 19:33:52] 2025-10-13 17:33:06,673 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 19:33:52] 2025-10-13 17:33:45,350 | INFO     | [monitor] cgroup control has ended
[2025-10-13 19:33:52] 2025-10-13 17:33:47,045 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139675602163520)>', '<ExcThread(monitor, started 139675247290112)>']
[2025-10-13 19:33:52] 2025-10-13 17:33:47,901 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 19:33:52] 2025-10-13 17:33:47,901 | INFO     | [monitor] control thread has ended
[2025-10-13 19:33:52] 2025-10-13 17:33:52,059 | INFO     | all workflow threads have been joined
[2025-10-13 19:33:52] 2025-10-13 17:33:52,060 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 19:33:52] 2025-10-13 17:33:52,060 | INFO     | traces error code: 0
[2025-10-13 19:33:52] 2025-10-13 17:33:52,061 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 19:33:52] 2025-10-13 17:33:52,104 [wrapper] ==== pilot stdout END ====
[2025-10-13 19:33:52] 2025-10-13 17:33:52,107 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 19:33:52] 2025-10-13 17:33:52,109 [wrapper] pilotpid: 2601623
[2025-10-13 19:33:52] 2025-10-13 17:33:52,111 [wrapper] Pilot exit status: 0
[2025-10-13 19:33:52] 2025-10-13 17:33:52,117 [wrapper] pandaids: 6841068729
[2025-10-13 19:33:52] 2025-10-13 17:33:52,130 [wrapper] cleanup supervisor_pilot 2623140 2601624
[2025-10-13 19:33:52] 2025-10-13 17:33:52,132 [wrapper] Test setup, not cleaning
[2025-10-13 19:33:52] 2025-10-13 17:33:52,134 [wrapper] apfmon messages muted
[2025-10-13 19:33:52] 2025-10-13 17:33:52,136 [wrapper] ==== wrapper stdout END ====
[2025-10-13 19:33:52] 2025-10-13 17:33:52,138 [wrapper] ==== wrapper stderr END ====
[2025-10-13 19:33:52]  *** Error codes and diagnostics ***
[2025-10-13 19:33:52]     "exeErrorCode": 0,
[2025-10-13 19:33:52]     "exeErrorDiag": "",
[2025-10-13 19:33:52]     "pilotErrorCode": 0,
[2025-10-13 19:33:52]     "pilotErrorDiag": "",
[2025-10-13 19:33:52]  *** Listing of results directory ***
[2025-10-13 19:33:52] total 408740
[2025-10-13 19:33:52] -rw-r--r-- 1 boinc boinc    557409 Oct 13 02:11 pilot3.tar.gz
[2025-10-13 19:33:52] -rw-r--r-- 1 boinc boinc      5112 Oct 13 02:19 queuedata.json
[2025-10-13 19:33:52] -rwx------ 1 boinc boinc     36292 Oct 13 02:19 runpilot2-wrapper.sh
[2025-10-13 19:33:52] -rw-r--r-- 1 boinc boinc       100 Oct 13 17:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 19:33:52] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 17:30 run_atlas
[2025-10-13 19:33:52] -rw-r--r-- 1 boinc boinc       105 Oct 13 17:30 job.xml
[2025-10-13 19:33:52] -rw-r--r-- 2 boinc boinc 220761635 Oct 13 17:30 EVNT.46676267._004685.pool.root.1
[2025-10-13 19:33:52] -rw-r--r-- 2 boinc boinc    569679 Oct 13 17:30 input.tar.gz
[2025-10-13 19:33:52] -rw-r--r-- 2 boinc boinc     15120 Oct 13 17:30 start_atlas.sh
[2025-10-13 19:33:52] drwxrwx--x 2 boinc boinc      4096 Oct 13 17:30 shared
[2025-10-13 19:33:52] -rw-r--r-- 1 boinc boinc         0 Oct 13 17:30 boinc_setup_complete
[2025-10-13 19:33:52] -rw-r--r-- 1 boinc boinc      6206 Oct 13 17:30 init_data.xml
[2025-10-13 19:33:52] -rw-r--r-- 1 boinc boinc         0 Oct 13 17:30 boinc_lockfile
[2025-10-13 19:33:52] -rw-r--r-- 1 boinc boinc      2550 Oct 13 17:30 pandaJob.out
[2025-10-13 19:33:52] -rw------- 1 boinc boinc    972783 Oct 13 17:30 agis_schedconf.cvmfs.json
[2025-10-13 19:33:52] -rw------- 1 boinc boinc   1560580 Oct 13 17:30 agis_ddmendpoints.agis.ALL.json
[2025-10-13 19:33:52] drwx------ 5 boinc boinc      4096 Oct 13 17:30 pilot3
[2025-10-13 19:33:52] -rw------- 1 boinc boinc        95 Oct 13 19:32 pilot_heartbeat.json
[2025-10-13 19:33:52] -rw------- 1 boinc boinc 191235528 Oct 13 19:32 HITS.46676269._092965.pool.root.1
[2025-10-13 19:33:52] -rw-r--r-- 1 boinc boinc       529 Oct 13 19:32 boinc_task_state.xml
[2025-10-13 19:33:52] -rw------- 1 boinc boinc      1015 Oct 13 19:32 memory_monitor_summary.json
[2025-10-13 19:33:52] -rw------- 1 boinc boinc    275225 Oct 13 19:32 log.46676269._092965.job.log.tgz.1
[2025-10-13 19:33:52] -rw------- 1 boinc boinc      7753 Oct 13 19:32 heartbeat.json
[2025-10-13 19:33:52] -rw-r--r-- 1 boinc boinc        27 Oct 13 19:33 wrapper_checkpoint.txt
[2025-10-13 19:33:52] -rw-r--r-- 1 boinc boinc      8192 Oct 13 19:33 boinc_mmap_file
[2025-10-13 19:33:52] -rw------- 1 boinc boinc      4814 Oct 13 19:33 pilotlog.txt
[2025-10-13 19:33:52] -rw------- 1 boinc boinc   1059531 Oct 13 19:33 log.46676269._092965.job.log.1
[2025-10-13 19:33:52] -rw------- 1 boinc boinc       357 Oct 13 19:33 output.list
[2025-10-13 19:33:52] -rw-r--r-- 1 boinc boinc       620 Oct 13 19:33 runtime_log
[2025-10-13 19:33:52] -rw------- 1 boinc boinc   1351680 Oct 13 19:33 result.tar.gz
[2025-10-13 19:33:52] -rw-r--r-- 1 boinc boinc      8777 Oct 13 19:33 runtime_log.err
[2025-10-13 19:33:52] -rw------- 1 boinc boinc       659 Oct 13 19:33 ZNcMDmySLS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmsLVMDmitnAUm.diag
[2025-10-13 19:33:52] -rw-r--r-- 1 boinc boinc      7581 Oct 13 19:33 stderr.txt
[2025-10-13 19:33:52] HITS file was successfully produced:
[2025-10-13 19:33:52] -rw------- 1 boinc boinc 191235528 Oct 13 19:32 shared/HITS.pool.root.1
[2025-10-13 19:33:52]  *** Contents of shared directory: ***
[2025-10-13 19:33:52] total 404248
[2025-10-13 19:33:52] -rw-r--r-- 2 boinc boinc 220761635 Oct 13 17:30 ATLAS.root_0
[2025-10-13 19:33:52] -rw-r--r-- 2 boinc boinc    569679 Oct 13 17:30 input.tar.gz
[2025-10-13 19:33:52] -rw-r--r-- 2 boinc boinc     15120 Oct 13 17:30 start_atlas.sh
[2025-10-13 19:33:52] -rw------- 1 boinc boinc 191235528 Oct 13 19:32 HITS.pool.root.1
[2025-10-13 19:33:52] -rw------- 1 boinc boinc   1351680 Oct 13 19:33 result.tar.gz
19:33:53 (2597916): run_atlas exited; CPU time 14278.012961
19:33:53 (2597916): called boinc_finish(0)

</stderr_txt>
]]>

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