Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
02:02:33 (9063): wrapper (7.7.26015): starting
02:02:33 (9063): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 02:02:33] Arguments: --nthreads 8
[2025-10-13 02:02:33] Threads: 8
[2025-10-13 02:02:33] Checking for CVMFS
[2025-10-13 02:02:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 02:02:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 02:02:33] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 02:02:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 02:02:33] 2.11.2.0 26213 1861 69664 151650 3 57 16101084 20275201 1 130560 0 1409456 99.991 64850 40683 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 02:02:33] CVMFS is ok
[2025-10-13 02:02:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 02:02:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 02:02:33] Further information can be found at the LHC@home message board.
[2025-10-13 02:02:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 02:02:33] Checking for apptainer binary...
[2025-10-13 02:02:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 02:02:33] Running /usr/bin/apptainer --version
[2025-10-13 02:02:33] apptainer version 1.3.2-1.el7
[2025-10-13 02:02:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 02:02:35] c-115-4.aglt2.org
[2025-10-13 02:02:35] apptainer works
[2025-10-13 02:02:35] Set ATHENA_PROC_NUMBER=8
[2025-10-13 02:02:35] Set ATHENA_CORE_NUMBER=8
[2025-10-13 02:02:35] Starting ATLAS job with PandaID=6841069613
[2025-10-13 02:02:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 03:54:08]  *** The last 200 lines of the pilot log: ***
[2025-10-13 03:54:09] 2025-10-13 07:53:16,584 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6841069613/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 03:54:09] 2025-10-13 07:53:16,679 | INFO     | number of running child processes to parent process 19187: 1
[2025-10-13 03:54:09] 2025-10-13 07:53:16,679 | INFO     | maximum number of monitored processes: 6
[2025-10-13 03:54:09] 2025-10-13 07:53:18,353 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-13 03:54:09] 2025-10-13 07:53:18,356 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1729.125
[2025-10-13 03:54:09] 2025-10-13 07:53:18,357 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6841069613/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 03:54:09] 2025-10-13 07:53:18,357 | INFO     | time since job start (6626s) is within the limit (172800.0s)
[2025-10-13 03:54:09] 2025-10-13 07:53:18,358 | INFO     | extracted standard info from prmon json
[2025-10-13 03:54:09] 2025-10-13 07:53:18,358 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 03:54:09] 2025-10-13 07:53:18,358 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 03:54:09] 2025-10-13 07:53:18,359 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 03:54:09] 2025-10-13 07:53:18,359 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 03:54:09] 2025-10-13 07:53:18,361 | INFO     | fitting pss+swap vs Time
[2025-10-13 03:54:09] 2025-10-13 07:53:18,361 | INFO     | sum of square deviations: 390582207.0
[2025-10-13 03:54:09] 2025-10-13 07:53:18,362 | INFO     | sum of deviations: 106839914.0000005
[2025-10-13 03:54:09] 2025-10-13 07:53:18,362 | INFO     | mean x: 1760338665.5
[2025-10-13 03:54:09] 2025-10-13 07:53:18,362 | INFO     | mean y: 2552905.222222222
[2025-10-13 03:54:09] 2025-10-13 07:53:18,362 | INFO     | -- intersect: -478970390.67357796
[2025-10-13 03:54:09] 2025-10-13 07:53:18,362 | INFO     | intersect: -478970390.67357796
[2025-10-13 03:54:09] 2025-10-13 07:53:18,362 | INFO     | chi2: 1.547975465259527
[2025-10-13 03:54:09] 2025-10-13 07:53:18,363 | INFO     | sum of square deviations: 338804492.0
[2025-10-13 03:54:09] 2025-10-13 07:53:18,363 | INFO     | sum of deviations: 506912562.00000036
[2025-10-13 03:54:09] 2025-10-13 07:53:18,363 | INFO     | mean x: 1760338513.0
[2025-10-13 03:54:09] 2025-10-13 07:53:18,363 | INFO     | mean y: 2554084.3980582524
[2025-10-13 03:54:09] 2025-10-13 07:53:18,364 | INFO     | -- intersect: -2631229488.9676127
[2025-10-13 03:54:09] 2025-10-13 07:53:18,364 | INFO     | intersect: -2631229488.9676127
[2025-10-13 03:54:09] 2025-10-13 07:53:18,364 | INFO     | chi2: 1.5501571041132094
[2025-10-13 03:54:09] 2025-10-13 07:53:18,364 | INFO     | current chi2=1.5501571041132094 (change=-0.1409349762088525 %)
[2025-10-13 03:54:09] 2025-10-13 07:53:18,364 | INFO     | right removable region: 102
[2025-10-13 03:54:09] 2025-10-13 07:53:18,364 | INFO     | sum of square deviations: 338804492.0
[2025-10-13 03:54:09] 2025-10-13 07:53:18,365 | INFO     | sum of deviations: -15708073522.000002
[2025-10-13 03:54:09] 2025-10-13 07:53:18,365 | INFO     | mean x: 1760338818.0
[2025-10-13 03:54:09] 2025-10-13 07:53:18,365 | INFO     | mean y: 2598476.980582524
[2025-10-13 03:54:09] 2025-10-13 07:53:18,365 | INFO     | -- intersect: 81617607220.05998
[2025-10-13 03:54:09] 2025-10-13 07:53:18,365 | INFO     | intersect: 81617607220.05998
[2025-10-13 03:54:09] 2025-10-13 07:53:18,366 | INFO     | chi2: 0.10733470106724388
[2025-10-13 03:54:09] 2025-10-13 07:53:18,366 | INFO     | current chi2=0.10733470106724388 (change=93.06612388399525 %)
[2025-10-13 03:54:09] 2025-10-13 07:53:18,366 | INFO     | sum of square deviations: 291817564.5
[2025-10-13 03:54:09] 2025-10-13 07:53:18,367 | INFO     | sum of deviations: -14474433556.0
[2025-10-13 03:54:09] 2025-10-13 07:53:18,367 | INFO     | mean x: 1760338970.5
[2025-10-13 03:54:09] 2025-10-13 07:53:18,367 | INFO     | mean y: 2594330.06122449
[2025-10-13 03:54:09] 2025-10-13 07:53:18,367 | INFO     | -- intersect: 87317110535.40668
[2025-10-13 03:54:09] 2025-10-13 07:53:18,367 | INFO     | intersect: 87317110535.40668
[2025-10-13 03:54:09] 2025-10-13 07:53:18,367 | INFO     | chi2: 0.09381634660331033
[2025-10-13 03:54:09] 2025-10-13 07:53:18,367 | INFO     | current chi2=0.09381634660331033 (change=12.594579692791497 %)
[2025-10-13 03:54:09] 2025-10-13 07:53:18,368 | INFO     | left removable region: 20
[2025-10-13 03:54:09] 2025-10-13 07:53:18,368 | INFO     | sum of square deviations: 170944600.5
[2025-10-13 03:54:09] 2025-10-13 07:53:18,368 | INFO     | sum of deviations: -8043503554.0
[2025-10-13 03:54:09] 2025-10-13 07:53:18,368 | INFO     | mean x: 1760339092.5
[2025-10-13 03:54:09] 2025-10-13 07:53:18,368 | INFO     | mean y: 2575712.2682926827
[2025-10-13 03:54:09] 2025-10-13 07:53:18,369 | INFO     | -- intersect: 82832297770.49081
[2025-10-13 03:54:09] 2025-10-13 07:53:18,369 | INFO     | intersect: 82832297770.49081
[2025-10-13 03:54:09] 2025-10-13 07:53:18,369 | INFO     | chi2: 0.08194590745384035
[2025-10-13 03:54:09] 2025-10-13 07:53:18,369 | INFO     | -- intersect: 82832297770.49081
[2025-10-13 03:54:09] 2025-10-13 07:53:18,369 | INFO     | current memory leak: -47.05 B/s (using 82 data points, chi2=0.08)
[2025-10-13 03:54:09] 2025-10-13 07:53:18,369 | INFO     | could have reported an average CPU frequency of 2097 MHz (7 samples)
[2025-10-13 03:54:09] 2025-10-13 07:53:18,370 | INFO     | ..............................
[2025-10-13 03:54:09] 2025-10-13 07:53:18,370 | INFO     | . Timing measurements:
[2025-10-13 03:54:09] 2025-10-13 07:53:18,370 | INFO     | . get job = 0 s
[2025-10-13 03:54:09] 2025-10-13 07:53:18,370 | INFO     | . initial setup = 2 s
[2025-10-13 03:54:09] 2025-10-13 07:53:18,370 | INFO     | . payload setup = 8 s
[2025-10-13 03:54:09] 2025-10-13 07:53:18,370 | INFO     | . stage-in = 0 s
[2025-10-13 03:54:09] 2025-10-13 07:53:18,370 | INFO     | . payload execution = 6589 s
[2025-10-13 03:54:09] 2025-10-13 07:53:18,370 | INFO     | . stage-out = 0 s
[2025-10-13 03:54:09] 2025-10-13 07:53:18,371 | INFO     | . log creation = 0 s
[2025-10-13 03:54:09] 2025-10-13 07:53:18,371 | INFO     | ..............................
[2025-10-13 03:54:09] 2025-10-13 07:53:18,453 | INFO     | 
[2025-10-13 03:54:09] 2025-10-13 07:53:18,453 | INFO     | job summary report
[2025-10-13 03:54:09] 2025-10-13 07:53:18,454 | INFO     | --------------------------------------------------
[2025-10-13 03:54:09] 2025-10-13 07:53:18,454 | INFO     | PanDA job id: 6841069613
[2025-10-13 03:54:09] 2025-10-13 07:53:18,454 | INFO     | task id: 46676269
[2025-10-13 03:54:09] 2025-10-13 07:53:18,454 | INFO     | errors: (none)
[2025-10-13 03:54:09] 2025-10-13 07:53:18,454 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 03:54:09] 2025-10-13 07:53:18,454 | INFO     | pilot state: finished 
[2025-10-13 03:54:09] 2025-10-13 07:53:18,455 | INFO     | transexitcode: 0
[2025-10-13 03:54:09] 2025-10-13 07:53:18,455 | INFO     | exeerrorcode: 0
[2025-10-13 03:54:09] 2025-10-13 07:53:18,455 | INFO     | exeerrordiag: 
[2025-10-13 03:54:09] 2025-10-13 07:53:18,455 | INFO     | exitcode: 0
[2025-10-13 03:54:09] 2025-10-13 07:53:18,455 | INFO     | exitmsg: OK
[2025-10-13 03:54:09] 2025-10-13 07:53:18,455 | INFO     | cpuconsumptiontime: 48270 s
[2025-10-13 03:54:09] 2025-10-13 07:53:18,456 | INFO     | nevents: 400
[2025-10-13 03:54:09] 2025-10-13 07:53:18,456 | INFO     | neventsw: 0
[2025-10-13 03:54:09] 2025-10-13 07:53:18,456 | INFO     | pid: 19187
[2025-10-13 03:54:09] 2025-10-13 07:53:18,456 | INFO     | pgrp: 19187
[2025-10-13 03:54:09] 2025-10-13 07:53:18,456 | INFO     | corecount: 8
[2025-10-13 03:54:09] 2025-10-13 07:53:18,456 | INFO     | event service: False
[2025-10-13 03:54:09] 2025-10-13 07:53:18,457 | INFO     | sizes: {0: 2348577, 1: 2348832, 7: 2349094, 12: 2349122, 6601: 2376235, 6602: 2376234, 6603: 2385472, 6610: 2385610}
[2025-10-13 03:54:09] 2025-10-13 07:53:18,457 | INFO     | --------------------------------------------------
[2025-10-13 03:54:09] 2025-10-13 07:53:18,457 | INFO     | 
[2025-10-13 03:54:09] 2025-10-13 07:53:18,457 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 03:54:09] 2025-10-13 07:53:18,487 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 03:54:09] 2025-10-13 07:53:18,488 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 03:54:09] 2025-10-13 07:53:18,488 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 03:54:09] 2025-10-13 07:53:18,488 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 03:54:09] 2025-10-13 07:53:18,489 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 03:54:09] 2025-10-13 07:53:18,489 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 03:54:09] 2025-10-13 07:53:18,489 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 03:54:09] 2025-10-13 07:53:18,489 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 03:54:09] 2025-10-13 07:53:18,489 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 03:54:09] 2025-10-13 07:53:18,489 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 03:54:09] 2025-10-13 07:53:18,490 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 03:54:09] 2025-10-13 07:53:18,490 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 03:54:09] 2025-10-13 07:53:18,490 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 03:54:09] 2025-10-13 07:53:18,490 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 03:54:09] 2025-10-13 07:53:18,490 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 03:54:09] 2025-10-13 07:53:18,490 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 03:54:09] 2025-10-13 07:53:18,491 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 03:54:09] 2025-10-13 07:53:18,491 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 03:54:09] 2025-10-13 07:53:18,491 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 03:54:09] 2025-10-13 07:53:18,491 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 03:54:09] 2025-10-13 07:53:18,491 | INFO     | job 6841069613 has completed (purged errors)
[2025-10-13 03:54:09] 2025-10-13 07:53:18,492 | INFO     | overall cleanup function is called
[2025-10-13 03:54:09] 2025-10-13 07:53:19,499 | INFO     | --- collectZombieJob: --- 10, [19187]
[2025-10-13 03:54:09] 2025-10-13 07:53:19,500 | INFO     | zombie collector waiting for pid 19187
[2025-10-13 03:54:09] 2025-10-13 07:53:19,500 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 03:54:09] 2025-10-13 07:53:19,500 | INFO     | collected zombie processes
[2025-10-13 03:54:09] 2025-10-13 07:53:19,500 | INFO     | will attempt to kill all subprocesses of pid=19187
[2025-10-13 03:54:09] 2025-10-13 07:53:19,584 | INFO     | process IDs to be killed: [19187] (in reverse order)
[2025-10-13 03:54:09] 2025-10-13 07:53:19,639 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 03:54:09] 2025-10-13 07:53:19,639 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 03:54:09] 2025-10-13 07:53:19,643 | INFO     | did not find any defunct processes belonging to 19187
[2025-10-13 03:54:09] 2025-10-13 07:53:19,646 | INFO     | did not find any defunct processes belonging to 19187
[2025-10-13 03:54:09] 2025-10-13 07:53:19,646 | INFO     | ready for new job
[2025-10-13 03:54:09] 2025-10-13 07:53:19,646 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 03:54:09] 2025-10-13 07:53:19,647 | INFO     | ***************************************
[2025-10-13 03:54:09] 2025-10-13 07:53:19,648 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 03:54:09] 2025-10-13 07:53:19,648 | INFO     | ***************************************
[2025-10-13 03:54:09] 2025-10-13 07:53:19,648 | INFO     | 
[2025-10-13 03:54:09] 2025-10-13 07:53:19,648 | INFO     | architecture information:
[2025-10-13 03:54:09] 2025-10-13 07:53:19,649 | INFO     | executing command: cat /etc/os-release
[2025-10-13 03:54:09] 2025-10-13 07:53:19,667 | INFO     | cat /etc/os-release:
[2025-10-13 03:54:09] NAME="CentOS Linux"
[2025-10-13 03:54:09] VERSION="7 (Core)"
[2025-10-13 03:54:09] ID="centos"
[2025-10-13 03:54:09] ID_LIKE="rhel fedora"
[2025-10-13 03:54:09] VERSION_ID="7"
[2025-10-13 03:54:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 03:54:09] ANSI_COLOR="0;31"
[2025-10-13 03:54:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 03:54:09] HOME_URL="https://www.centos.org/"
[2025-10-13 03:54:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 03:54:09] 
[2025-10-13 03:54:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 03:54:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 03:54:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 03:54:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 03:54:09] 
[2025-10-13 03:54:09] 2025-10-13 07:53:19,668 | INFO     | ***************************************
[2025-10-13 03:54:09] 2025-10-13 07:53:20,171 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 03:54:09] 2025-10-13 07:53:20,191 | INFO     | sufficient remaining disk space (18593349632 B)
[2025-10-13 03:54:09] 2025-10-13 07:53:20,192 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 03:54:09] 2025-10-13 07:53:20,192 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 03:54:09] 2025-10-13 07:53:20,192 | INFO     | update_server=False
[2025-10-13 03:54:09] 2025-10-13 07:53:20,192 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 03:54:09] 2025-10-13 07:53:20,193 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 03:54:09] 2025-10-13 07:53:20,193 | INFO     | aborting loop
[2025-10-13 03:54:09] 2025-10-13 07:53:20,193 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-13 03:54:09] 2025-10-13 07:53:20,194 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 03:54:09] 2025-10-13 07:53:20,194 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 03:54:09] 2025-10-13 07:53:20,195 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 03:54:09] 2025-10-13 07:53:20,195 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 03:54:09] 2025-10-13 07:53:20,196 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 03:54:09] 2025-10-13 07:53:20,476 | INFO     | all payload control threads have been joined
[2025-10-13 03:54:09] 2025-10-13 07:53:20,762 | INFO     | all job control threads have been joined
[2025-10-13 03:54:09] 2025-10-13 07:53:21,194 | INFO     | [job] retrieve thread has finished
[2025-10-13 03:54:09] 2025-10-13 07:53:21,196 | INFO     | [job] queue monitor thread has finished
[2025-10-13 03:54:09] 2025-10-13 07:53:21,199 | INFO     | [job] job monitor thread has finished
[2025-10-13 03:54:09] 2025-10-13 07:53:21,222 | INFO     | all data control threads have been joined
[2025-10-13 03:54:09] 2025-10-13 07:53:21,232 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 03:54:09] 2025-10-13 07:53:21,315 | INFO     | [payload] validate_post thread has finished
[2025-10-13 03:54:09] 2025-10-13 07:53:21,481 | INFO     | [payload] control thread has finished
[2025-10-13 03:54:09] 2025-10-13 07:53:21,691 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 03:54:09] 2025-10-13 07:53:21,767 | INFO     | [job] control thread has finished
[2025-10-13 03:54:09] 2025-10-13 07:53:22,067 | INFO     | [job] validate thread has finished
[2025-10-13 03:54:09] 2025-10-13 07:53:22,201 | INFO     | [data] copytool_out thread has finished
[2025-10-13 03:54:09] 2025-10-13 07:53:22,214 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 03:54:09] 2025-10-13 07:53:22,218 | INFO     | [data] copytool_in thread has finished
[2025-10-13 03:54:09] 2025-10-13 07:53:22,226 | INFO     | [data] control thread has finished
[2025-10-13 03:54:09] 2025-10-13 07:53:22,234 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 03:54:09] 2025-10-13 07:53:22,282 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 03:54:09] 2025-10-13 07:53:22,295 | INFO     | [payload] failed_post thread has finished
[2025-10-13 03:54:09] 2025-10-13 07:53:26,287 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 03:54:09] 2025-10-13 07:54:02,391 | INFO     | [monitor] cgroup control has ended
[2025-10-13 03:54:09] 2025-10-13 07:54:03,615 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140207837542208)>', '<ExcThread(monitor, started 140206657238784)>']
[2025-10-13 03:54:09] 2025-10-13 07:54:04,397 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 03:54:09] 2025-10-13 07:54:04,397 | INFO     | [monitor] control thread has ended
[2025-10-13 03:54:09] 2025-10-13 07:54:08,640 | INFO     | all workflow threads have been joined
[2025-10-13 03:54:09] 2025-10-13 07:54:08,640 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 03:54:09] 2025-10-13 07:54:08,641 | INFO     | traces error code: 0
[2025-10-13 03:54:09] 2025-10-13 07:54:08,641 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 03:54:09] 2025-10-13 07:54:08,761 [wrapper] ==== pilot stdout END ====
[2025-10-13 03:54:09] 2025-10-13 07:54:08,766 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 03:54:09] 2025-10-13 07:54:08,771 [wrapper] pilotpid: 12747
[2025-10-13 03:54:09] 2025-10-13 07:54:08,776 [wrapper] Pilot exit status: 0
[2025-10-13 03:54:09] 2025-10-13 07:54:08,796 [wrapper] pandaids: 6841069613
[2025-10-13 03:54:09] 2025-10-13 07:54:08,845 [wrapper] cleanup supervisor_pilot 24576 12748
[2025-10-13 03:54:09] 2025-10-13 07:54:08,851 [wrapper] Test setup, not cleaning
[2025-10-13 03:54:09] 2025-10-13 07:54:08,855 [wrapper] apfmon messages muted
[2025-10-13 03:54:09] 2025-10-13 07:54:08,860 [wrapper] ==== wrapper stdout END ====
[2025-10-13 03:54:09] 2025-10-13 07:54:08,865 [wrapper] ==== wrapper stderr END ====
[2025-10-13 03:54:09]  *** Error codes and diagnostics ***
[2025-10-13 03:54:09]     "exeErrorCode": 0,
[2025-10-13 03:54:09]     "exeErrorDiag": "",
[2025-10-13 03:54:09]     "pilotErrorCode": 0,
[2025-10-13 03:54:09]     "pilotErrorDiag": "",
[2025-10-13 03:54:09]  *** Listing of results directory ***
[2025-10-13 03:54:09] total 413588
[2025-10-13 03:54:09] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 20:48 pilot3.tar.gz
[2025-10-13 03:54:09] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 20:53 queuedata.json
[2025-10-13 03:54:09] -rwx------ 1 boincer umatlas     36292 Oct 12 20:55 runpilot2-wrapper.sh
[2025-10-13 03:54:09] -rw-r--r-- 1 boincer umatlas       100 Oct 13 02:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 03:54:09] -rwxr-xr-x 1 boincer umatlas      7986 Oct 13 02:02 run_atlas
[2025-10-13 03:54:09] -rw-r--r-- 1 boincer umatlas       105 Oct 13 02:02 job.xml
[2025-10-13 03:54:09] -rw-r--r-- 2 boincer umatlas 221696383 Oct 13 02:02 EVNT.46676267._004713.pool.root.1
[2025-10-13 03:54:09] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 02:02 start_atlas.sh
[2025-10-13 03:54:09] drwxrwx--x 2 boincer umatlas      4096 Oct 13 02:02 shared
[2025-10-13 03:54:09] -rw-r--r-- 2 boincer umatlas    569677 Oct 13 02:02 input.tar.gz
[2025-10-13 03:54:09] -rw-r--r-- 1 boincer umatlas         0 Oct 13 02:02 boinc_lockfile
[2025-10-13 03:54:09] -rw-r--r-- 1 boincer umatlas      2548 Oct 13 02:02 pandaJob.out
[2025-10-13 03:54:09] -rw------- 1 boincer umatlas    973230 Oct 13 02:02 agis_schedconf.cvmfs.json
[2025-10-13 03:54:09] -rw------- 1 boincer umatlas   1560580 Oct 13 02:02 agis_ddmendpoints.agis.ALL.json
[2025-10-13 03:54:09] drwx------ 5 boincer umatlas      4096 Oct 13 02:02 pilot3
[2025-10-13 03:54:09] -rw-r--r-- 1 boincer umatlas      5909 Oct 13 03:49 init_data.xml
[2025-10-13 03:54:09] -rw-r--r-- 1 boincer umatlas       530 Oct 13 03:52 boinc_task_state.xml
[2025-10-13 03:54:09] -rw------- 1 boincer umatlas 195357068 Oct 13 03:52 HITS.46676269._093653.pool.root.1
[2025-10-13 03:54:09] -rw------- 1 boincer umatlas      1063 Oct 13 03:53 memory_monitor_summary.json
[2025-10-13 03:54:09] -rw------- 1 boincer umatlas    342811 Oct 13 03:53 log.46676269._093653.job.log.tgz.1
[2025-10-13 03:54:09] -rw------- 1 boincer umatlas      7846 Oct 13 03:53 heartbeat.json
[2025-10-13 03:54:09] -rw------- 1 boincer umatlas        95 Oct 13 03:53 pilot_heartbeat.json
[2025-10-13 03:54:09] -rw-r--r-- 1 boincer umatlas      8192 Oct 13 03:53 boinc_mmap_file
[2025-10-13 03:54:09] -rw-r--r-- 1 boincer umatlas        27 Oct 13 03:53 wrapper_checkpoint.txt
[2025-10-13 03:54:09] -rw------- 1 boincer umatlas      4552 Oct 13 03:54 pilotlog.txt
[2025-10-13 03:54:09] -rw------- 1 boincer umatlas    937855 Oct 13 03:54 log.46676269._093653.job.log.1
[2025-10-13 03:54:09] -rw------- 1 boincer umatlas       357 Oct 13 03:54 output.list
[2025-10-13 03:54:09] -rw-r--r-- 1 boincer umatlas       620 Oct 13 03:54 runtime_log
[2025-10-13 03:54:09] -rw------- 1 boincer umatlas   1300480 Oct 13 03:54 result.tar.gz
[2025-10-13 03:54:09] -rw-r--r-- 1 boincer umatlas      8698 Oct 13 03:54 runtime_log.err
[2025-10-13 03:54:09] -rw------- 1 boincer umatlas       657 Oct 13 03:54 OlKNDmn1LS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmuPVMDmhacein.diag
[2025-10-13 03:54:09] -rw-r--r-- 1 boincer umatlas     21028 Oct 13 03:54 stderr.txt
[2025-10-13 03:54:09] HITS file was successfully produced:
[2025-10-13 03:54:09] -rw------- 1 boincer umatlas 195357068 Oct 13 03:52 shared/HITS.pool.root.1
[2025-10-13 03:54:09]  *** Contents of shared directory: ***
[2025-10-13 03:54:09] total 409136
[2025-10-13 03:54:09] -rw-r--r-- 2 boincer umatlas 221696383 Oct 13 02:02 ATLAS.root_0
[2025-10-13 03:54:09] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 02:02 start_atlas.sh
[2025-10-13 03:54:09] -rw-r--r-- 2 boincer umatlas    569677 Oct 13 02:02 input.tar.gz
[2025-10-13 03:54:09] -rw------- 1 boincer umatlas 195357068 Oct 13 03:52 HITS.pool.root.1
[2025-10-13 03:54:09] -rw------- 1 boincer umatlas   1300480 Oct 13 03:54 result.tar.gz
03:54:10 (9063): run_atlas exited; CPU time 48280.390884
03:54:10 (9063): called boinc_finish(0)

</stderr_txt>
]]>

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