Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
02:05:06 (1616984): wrapper (7.7.26015): starting
02:05:06 (1616984): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 02:05:06] Arguments: --nthreads 8
[2025-10-13 02:05:06] Threads: 8
[2025-10-13 02:05:06] Checking for CVMFS
[2025-10-13 02:05:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 02:05:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 02:05:07] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 02:05:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 02:05:07] 2.13.2.0 9460 35286 230912 151650 1 188 31830647 32935937 2765 16776704 0 103764052 99.705 79615487 30073 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-13 02:05:07] CVMFS is ok
[2025-10-13 02:05:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 02:05:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 02:05:07] Further information can be found at the LHC@home message board.
[2025-10-13 02:05:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 02:05:07] Checking for apptainer binary...
[2025-10-13 02:05:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 02:05:07] Running /usr/bin/apptainer --version
[2025-10-13 02:05:07] apptainer version 1.4.3-1.el9
[2025-10-13 02:05:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 02:05:07] c-4-11.aglt2.org
[2025-10-13 02:05:07] apptainer works
[2025-10-13 02:05:07] Set ATHENA_PROC_NUMBER=8
[2025-10-13 02:05:07] Set ATHENA_CORE_NUMBER=8
[2025-10-13 02:05:07] Starting ATLAS job with PandaID=6841070106
[2025-10-13 02:05:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 03:33:39]  *** The last 200 lines of the pilot log: ***
[2025-10-13 03:33:39]  lfn=log.46676269._093911.job.log.tgz.1
[2025-10-13 03:33:39]  mtime=0
[2025-10-13 03:33:39]  protocol_id=None
[2025-10-13 03:33:39]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-13 03:33:39]  replicas=None
[2025-10-13 03:33:39]  scope=mc23_13p6TeV
[2025-10-13 03:33:39]  status=None
[2025-10-13 03:33:39]  status_code=0
[2025-10-13 03:33:39]  storage_token=
[2025-10-13 03:33:39]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6841070106/log.46676269._093911.job.log.tgz.1
[2025-10-13 03:33:39]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/66/6c/log.46676269._093911.job.log.tgz.1
[2025-10-13 03:33:39]  workdir=None
[2025-10-13 03:33:39] ]
[2025-10-13 03:33:39] 2025-10-13 07:33:02,438 | INFO     | transferring file log.46676269._093911.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6841070106/log.46676269._093911.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-13 03:33:39] 2025-10-13 07:33:02,438 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6841070106/log.46676269._093911.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._093911.job
[2025-10-13 03:33:39] 2025-10-13 07:33:02,453 | INFO     | adding to output.list: log.46676269._093911.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/66/6c/log.46676269._093911.job.log.tg
[2025-10-13 03:33:39] 2025-10-13 07:33:02,454 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 03:33:39] 2025-10-13 07:33:02,454 | INFO     | summary of transferred files:
[2025-10-13 03:33:39] 2025-10-13 07:33:02,454 | INFO     |  -- lfn=log.46676269._093911.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 03:33:39] 2025-10-13 07:33:02,455 | INFO     | stage-out finished correctly
[2025-10-13 03:33:39] 2025-10-13 07:33:03,575 | INFO     | time since job start (5266s) is within the limit (172800.0s)
[2025-10-13 03:33:39] 2025-10-13 07:33:03,629 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 03:33:39] 2025-10-13 07:33:03,729 | INFO     | job 6841070106 has state=finished
[2025-10-13 03:33:39] 2025-10-13 07:33:03,730 | INFO     | preparing for final server update for job 6841070106 in state='finished'
[2025-10-13 03:33:39] 2025-10-13 07:33:03,730 | INFO     | this job has now completed (state=finished)
[2025-10-13 03:33:39] 2025-10-13 07:33:03,730 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 03:33:39] 2025-10-13 07:33:03,731 | INFO     | log transfer has been attempted: DONE
[2025-10-13 03:33:39] 2025-10-13 07:33:03,731 | INFO     | job 6841070106 has finished - writing final server update
[2025-10-13 03:33:39] 2025-10-13 07:33:03,731 | INFO     | total number of processed events: 400 (read)
[2025-10-13 03:33:39] 2025-10-13 07:33:03,732 | INFO     | executing command: lscpu
[2025-10-13 03:33:39] 2025-10-13 07:33:03,778 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 03:33:39] 2025-10-13 07:33:05,580 | INFO     | time since job start (5268s) is within the limit (172800.0s)
[2025-10-13 03:33:39] 2025-10-13 07:33:06,208 | WARNING  | process 1627091 can no longer be monitored (due to stat problems) - aborting
[2025-10-13 03:33:39] 2025-10-13 07:33:06,209 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6841070106/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 03:33:39] 2025-10-13 07:33:06,454 | INFO     | number of running child processes to parent process 1627091: 1
[2025-10-13 03:33:39] 2025-10-13 07:33:06,454 | INFO     | maximum number of monitored processes: 6
[2025-10-13 03:33:39] 2025-10-13 07:33:07,044 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 03:33:39] 2025-10-13 07:33:07,050 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2900.0645750000012
[2025-10-13 03:33:39] 2025-10-13 07:33:07,057 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6841070106/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 03:33:39] 2025-10-13 07:33:07,057 | INFO     | extracted standard info from prmon json
[2025-10-13 03:33:39] 2025-10-13 07:33:07,058 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 03:33:39] 2025-10-13 07:33:07,058 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 03:33:39] 2025-10-13 07:33:07,058 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 03:33:39] 2025-10-13 07:33:07,058 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 03:33:39] 2025-10-13 07:33:07,061 | INFO     | fitting pss+swap vs Time
[2025-10-13 03:33:39] 2025-10-13 07:33:07,061 | INFO     | sum of square deviations: 152858680.0
[2025-10-13 03:33:39] 2025-10-13 07:33:07,061 | INFO     | sum of deviations: -4929418234.999997
[2025-10-13 03:33:39] 2025-10-13 07:33:07,062 | INFO     | mean x: 1760338226.0
[2025-10-13 03:33:39] 2025-10-13 07:33:07,062 | INFO     | mean y: 2241331.240506329
[2025-10-13 03:33:39] 2025-10-13 07:33:07,062 | INFO     | -- intersect: 56769991458.429535
[2025-10-13 03:33:39] 2025-10-13 07:33:07,062 | INFO     | intersect: 56769991458.429535
[2025-10-13 03:33:39] 2025-10-13 07:33:07,062 | INFO     | chi2: 0.03955566903775232
[2025-10-13 03:33:39] 2025-10-13 07:33:07,062 | INFO     | -- intersect: 56769991458.429535
[2025-10-13 03:33:39] 2025-10-13 07:33:07,062 | INFO     | current memory leak: -32.25 B/s (using 79 data points, chi2=0.04)
[2025-10-13 03:33:39] 2025-10-13 07:33:07,063 | INFO     | could have reported an average CPU frequency of 2836 MHz (6 samples)
[2025-10-13 03:33:39] 2025-10-13 07:33:07,063 | INFO     | ..............................
[2025-10-13 03:33:39] 2025-10-13 07:33:07,063 | INFO     | . Timing measurements:
[2025-10-13 03:33:39] 2025-10-13 07:33:07,063 | INFO     | . get job = 0 s
[2025-10-13 03:33:39] 2025-10-13 07:33:07,063 | INFO     | . initial setup = 2 s
[2025-10-13 03:33:39] 2025-10-13 07:33:07,064 | INFO     | . payload setup = 5 s
[2025-10-13 03:33:39] 2025-10-13 07:33:07,064 | INFO     | . stage-in = 0 s
[2025-10-13 03:33:39] 2025-10-13 07:33:07,064 | INFO     | . payload execution = 5240 s
[2025-10-13 03:33:39] 2025-10-13 07:33:07,064 | INFO     | . stage-out = 0 s
[2025-10-13 03:33:39] 2025-10-13 07:33:07,064 | INFO     | . log creation = 0 s
[2025-10-13 03:33:39] 2025-10-13 07:33:07,064 | INFO     | ..............................
[2025-10-13 03:33:39] 2025-10-13 07:33:07,168 | INFO     | 
[2025-10-13 03:33:39] 2025-10-13 07:33:07,169 | INFO     | job summary report
[2025-10-13 03:33:39] 2025-10-13 07:33:07,169 | INFO     | --------------------------------------------------
[2025-10-13 03:33:39] 2025-10-13 07:33:07,169 | INFO     | PanDA job id: 6841070106
[2025-10-13 03:33:39] 2025-10-13 07:33:07,169 | INFO     | task id: 46676269
[2025-10-13 03:33:39] 2025-10-13 07:33:07,169 | INFO     | errors: (none)
[2025-10-13 03:33:39] 2025-10-13 07:33:07,169 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 03:33:39] 2025-10-13 07:33:07,169 | INFO     | pilot state: finished 
[2025-10-13 03:33:39] 2025-10-13 07:33:07,169 | INFO     | transexitcode: 0
[2025-10-13 03:33:39] 2025-10-13 07:33:07,169 | INFO     | exeerrorcode: 0
[2025-10-13 03:33:39] 2025-10-13 07:33:07,170 | INFO     | exeerrordiag: 
[2025-10-13 03:33:39] 2025-10-13 07:33:07,170 | INFO     | exitcode: 0
[2025-10-13 03:33:39] 2025-10-13 07:33:07,170 | INFO     | exitmsg: OK
[2025-10-13 03:33:39] 2025-10-13 07:33:07,170 | INFO     | cpuconsumptiontime: 38754 s
[2025-10-13 03:33:39] 2025-10-13 07:33:07,170 | INFO     | nevents: 400
[2025-10-13 03:33:39] 2025-10-13 07:33:07,170 | INFO     | neventsw: 0
[2025-10-13 03:33:39] 2025-10-13 07:33:07,170 | INFO     | pid: 1627091
[2025-10-13 03:33:39] 2025-10-13 07:33:07,170 | INFO     | pgrp: 1627091
[2025-10-13 03:33:39] 2025-10-13 07:33:07,170 | INFO     | corecount: 8
[2025-10-13 03:33:39] 2025-10-13 07:33:07,171 | INFO     | event service: False
[2025-10-13 03:33:39] 2025-10-13 07:33:07,171 | INFO     | sizes: {0: 2348029, 1: 2348885, 5: 2349147, 12: 2349203, 5249: 2375645, 5250: 2384643, 5252: 2384827, 5255: 2385021}
[2025-10-13 03:33:39] 2025-10-13 07:33:07,171 | INFO     | --------------------------------------------------
[2025-10-13 03:33:39] 2025-10-13 07:33:07,171 | INFO     | 
[2025-10-13 03:33:39] 2025-10-13 07:33:07,171 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 03:33:39] 2025-10-13 07:33:07,189 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 03:33:39] 2025-10-13 07:33:07,190 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 03:33:39] 2025-10-13 07:33:07,190 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 03:33:39] 2025-10-13 07:33:07,190 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 03:33:39] 2025-10-13 07:33:07,190 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 03:33:39] 2025-10-13 07:33:07,190 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 03:33:39] 2025-10-13 07:33:07,190 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 03:33:39] 2025-10-13 07:33:07,191 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 03:33:39] 2025-10-13 07:33:07,191 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 03:33:39] 2025-10-13 07:33:07,191 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 03:33:39] 2025-10-13 07:33:07,191 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 03:33:39] 2025-10-13 07:33:07,191 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 03:33:39] 2025-10-13 07:33:07,191 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 03:33:39] 2025-10-13 07:33:07,191 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 03:33:39] 2025-10-13 07:33:07,191 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 03:33:39] 2025-10-13 07:33:07,192 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 03:33:39] 2025-10-13 07:33:07,192 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 03:33:39] 2025-10-13 07:33:07,192 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 03:33:39] 2025-10-13 07:33:07,192 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 03:33:39] 2025-10-13 07:33:07,192 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 03:33:39] 2025-10-13 07:33:07,192 | INFO     | job 6841070106 has completed (purged errors)
[2025-10-13 03:33:39] 2025-10-13 07:33:07,192 | INFO     | overall cleanup function is called
[2025-10-13 03:33:39] 2025-10-13 07:33:08,201 | INFO     | --- collectZombieJob: --- 10, [1627091]
[2025-10-13 03:33:39] 2025-10-13 07:33:08,201 | INFO     | zombie collector waiting for pid 1627091
[2025-10-13 03:33:39] 2025-10-13 07:33:08,201 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 03:33:39] 2025-10-13 07:33:08,201 | INFO     | collected zombie processes
[2025-10-13 03:33:39] 2025-10-13 07:33:08,201 | INFO     | will attempt to kill all subprocesses of pid=1627091
[2025-10-13 03:33:39] 2025-10-13 07:33:08,437 | INFO     | process IDs to be killed: [1627091] (in reverse order)
[2025-10-13 03:33:39] 2025-10-13 07:33:08,504 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 03:33:39] 2025-10-13 07:33:08,505 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 03:33:39] 2025-10-13 07:33:08,512 | INFO     | did not find any defunct processes belonging to 1627091
[2025-10-13 03:33:39] 2025-10-13 07:33:08,519 | INFO     | did not find any defunct processes belonging to 1627091
[2025-10-13 03:33:39] 2025-10-13 07:33:08,519 | INFO     | ready for new job
[2025-10-13 03:33:39] 2025-10-13 07:33:08,519 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 03:33:39] 2025-10-13 07:33:08,521 | INFO     | ***************************************
[2025-10-13 03:33:39] 2025-10-13 07:33:08,521 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 03:33:39] 2025-10-13 07:33:08,521 | INFO     | ***************************************
[2025-10-13 03:33:39] 2025-10-13 07:33:08,521 | INFO     | 
[2025-10-13 03:33:39] 2025-10-13 07:33:08,534 | INFO     | architecture information:
[2025-10-13 03:33:39] 2025-10-13 07:33:08,535 | INFO     | executing command: cat /etc/os-release
[2025-10-13 03:33:39] 2025-10-13 07:33:08,546 | INFO     | cat /etc/os-release:
[2025-10-13 03:33:39] NAME="CentOS Linux"
[2025-10-13 03:33:39] VERSION="7 (Core)"
[2025-10-13 03:33:39] ID="centos"
[2025-10-13 03:33:39] ID_LIKE="rhel fedora"
[2025-10-13 03:33:39] VERSION_ID="7"
[2025-10-13 03:33:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 03:33:39] ANSI_COLOR="0;31"
[2025-10-13 03:33:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 03:33:39] HOME_URL="https://www.centos.org/"
[2025-10-13 03:33:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 03:33:39] 
[2025-10-13 03:33:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 03:33:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 03:33:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 03:33:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 03:33:39] 
[2025-10-13 03:33:39] 2025-10-13 07:33:08,547 | INFO     | ***************************************
[2025-10-13 03:33:39] 2025-10-13 07:33:09,050 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 03:33:39] 2025-10-13 07:33:09,062 | INFO     | sufficient remaining disk space (74162634752 B)
[2025-10-13 03:33:39] 2025-10-13 07:33:09,063 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 03:33:39] 2025-10-13 07:33:09,063 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 03:33:39] 2025-10-13 07:33:09,063 | INFO     | update_server=False
[2025-10-13 03:33:39] 2025-10-13 07:33:09,063 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 03:33:39] 2025-10-13 07:33:09,063 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 03:33:39] 2025-10-13 07:33:09,064 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 03:33:39] 2025-10-13 07:33:09,498 | INFO     | all data control threads have been joined
[2025-10-13 03:33:39] 2025-10-13 07:33:09,735 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 03:33:39] 2025-10-13 07:33:09,792 | INFO     | all job control threads have been joined
[2025-10-13 03:33:39] 2025-10-13 07:33:09,962 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 03:33:39] 2025-10-13 07:33:09,963 | INFO     | aborting loop
[2025-10-13 03:33:39] 2025-10-13 07:33:10,065 | INFO     | [job] retrieve thread has finished
[2025-10-13 03:33:39] 2025-10-13 07:33:10,069 | INFO     | [job] queue monitor thread has finished
[2025-10-13 03:33:39] 2025-10-13 07:33:10,160 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 03:33:39] 2025-10-13 07:33:10,215 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 03:33:39] 2025-10-13 07:33:10,237 | INFO     | [payload] validate_post thread has finished
[2025-10-13 03:33:39] 2025-10-13 07:33:10,397 | INFO     | all payload control threads have been joined
[2025-10-13 03:33:39] 2025-10-13 07:33:10,477 | INFO     | [payload] failed_post thread has finished
[2025-10-13 03:33:39] 2025-10-13 07:33:10,503 | INFO     | [data] control thread has finished
[2025-10-13 03:33:39] 2025-10-13 07:33:10,797 | INFO     | [job] control thread has finished
[2025-10-13 03:33:39] 2025-10-13 07:33:10,870 | INFO     | [data] copytool_in thread has finished
[2025-10-13 03:33:39] 2025-10-13 07:33:10,968 | INFO     | [job] job monitor thread has finished
[2025-10-13 03:33:39] 2025-10-13 07:33:11,010 | INFO     | [job] validate thread has finished
[2025-10-13 03:33:39] 2025-10-13 07:33:11,069 | INFO     | [data] copytool_out thread has finished
[2025-10-13 03:33:39] 2025-10-13 07:33:11,145 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 03:33:39] 2025-10-13 07:33:11,403 | INFO     | [payload] control thread has finished
[2025-10-13 03:33:39] 2025-10-13 07:33:11,423 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 03:33:39] 2025-10-13 07:33:13,741 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 03:33:39] 2025-10-13 07:33:24,902 | INFO     | [monitor] cgroup control has ended
[2025-10-13 03:33:39] 2025-10-13 07:33:25,359 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140519044060992)>', '<ExcThread(monitor, started 140518554060544)>']
[2025-10-13 03:33:39] 2025-10-13 07:33:30,385 | INFO     | all workflow threads have been joined
[2025-10-13 03:33:39] 2025-10-13 07:33:30,385 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 03:33:39] 2025-10-13 07:33:30,386 | INFO     | traces error code: 0
[2025-10-13 03:33:39] 2025-10-13 07:33:30,386 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 03:33:39] 2025-10-13 07:33:38,963 | INFO     | PID=1620700 has CPU usage=5.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 03:33:39] 2025-10-13 07:33:38,964 | INFO     | .. there are 4 such processes running
[2025-10-13 03:33:39] 2025-10-13 07:33:38,964 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 03:33:39] 2025-10-13 07:33:38,964 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 03:33:39] 2025-10-13 07:33:38,964 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 03:33:39] 2025-10-13 07:33:38,964 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 03:33:39] 2025-10-13 07:33:38,964 | INFO     | [monitor] control thread has ended
[2025-10-13 03:33:39] 2025-10-13 07:33:39,064 [wrapper] ==== pilot stdout END ====
[2025-10-13 03:33:39] 2025-10-13 07:33:39,067 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 03:33:39] 2025-10-13 07:33:39,069 [wrapper] pilotpid: 1620700
[2025-10-13 03:33:39] 2025-10-13 07:33:39,071 [wrapper] Pilot exit status: 0
[2025-10-13 03:33:39] 2025-10-13 07:33:39,080 [wrapper] pandaids: 6841070106
[2025-10-13 03:33:39] 2025-10-13 07:33:39,126 [wrapper] cleanup supervisor_pilot 1819477 1620701
[2025-10-13 03:33:39] 2025-10-13 07:33:39,128 [wrapper] Test setup, not cleaning
[2025-10-13 03:33:39] 2025-10-13 07:33:39,131 [wrapper] apfmon messages muted
[2025-10-13 03:33:39] 2025-10-13 07:33:39,133 [wrapper] ==== wrapper stdout END ====
[2025-10-13 03:33:39] 2025-10-13 07:33:39,136 [wrapper] ==== wrapper stderr END ====
[2025-10-13 03:33:39]  *** Error codes and diagnostics ***
[2025-10-13 03:33:39]     "exeErrorCode": 0,
[2025-10-13 03:33:39]     "exeErrorDiag": "",
[2025-10-13 03:33:39]     "pilotErrorCode": 0,
[2025-10-13 03:33:39]     "pilotErrorDiag": "",
[2025-10-13 03:33:39]  *** Listing of results directory ***
[2025-10-13 03:33:39] total 414472
[2025-10-13 03:33:39] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 20:48 pilot3.tar.gz
[2025-10-13 03:33:39] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 21:12 queuedata.json
[2025-10-13 03:33:39] -rwx------. 1 boincer umatlas     36292 Oct 12 21:15 runpilot2-wrapper.sh
[2025-10-13 03:33:39] -rw-r--r--. 1 boincer umatlas       100 Oct 13 02:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 03:33:39] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 02:05 run_atlas
[2025-10-13 03:33:39] -rw-r--r--. 1 boincer umatlas       105 Oct 13 02:05 job.xml
[2025-10-13 03:33:39] -rw-r--r--. 2 boincer umatlas 221619397 Oct 13 02:05 EVNT.46676267._004723.pool.root.1
[2025-10-13 03:33:39] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 02:05 start_atlas.sh
[2025-10-13 03:33:39] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 02:05 shared
[2025-10-13 03:33:39] -rw-r--r--. 2 boincer umatlas    569679 Oct 13 02:05 input.tar.gz
[2025-10-13 03:33:39] -rw-r--r--. 1 boincer umatlas         0 Oct 13 02:05 boinc_lockfile
[2025-10-13 03:33:39] -rw-r--r--. 1 boincer umatlas      2550 Oct 13 02:05 pandaJob.out
[2025-10-13 03:33:39] -rw-------. 1 boincer umatlas    973230 Oct 13 02:05 agis_schedconf.cvmfs.json
[2025-10-13 03:33:39] -rw-------. 1 boincer umatlas   1560580 Oct 13 02:05 agis_ddmendpoints.agis.ALL.json
[2025-10-13 03:33:39] drwx------. 5 boincer umatlas      4096 Oct 13 02:05 pilot3
[2025-10-13 03:33:39] -rw-r--r--. 1 boincer umatlas      6661 Oct 13 03:28 init_data.xml
[2025-10-13 03:33:39] -rw-------. 1 boincer umatlas 196686920 Oct 13 03:32 HITS.46676269._093911.pool.root.1
[2025-10-13 03:33:39] -rw-r--r--. 1 boincer umatlas       529 Oct 13 03:32 boinc_task_state.xml
[2025-10-13 03:33:39] -rw-------. 1 boincer umatlas        95 Oct 13 03:32 pilot_heartbeat.json
[2025-10-13 03:33:39] -rw-------. 1 boincer umatlas      1033 Oct 13 03:32 memory_monitor_summary.json
[2025-10-13 03:33:39] -rw-------. 1 boincer umatlas    332049 Oct 13 03:33 log.46676269._093911.job.log.tgz.1
[2025-10-13 03:33:39] -rw-------. 1 boincer umatlas      7809 Oct 13 03:33 heartbeat.json
[2025-10-13 03:33:39] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 03:33 boinc_mmap_file
[2025-10-13 03:33:39] -rw-r--r--. 1 boincer umatlas        27 Oct 13 03:33 wrapper_checkpoint.txt
[2025-10-13 03:33:39] -rw-------. 1 boincer umatlas       822 Oct 13 03:33 pilotlog.txt
[2025-10-13 03:33:39] -rw-------. 1 boincer umatlas    773296 Oct 13 03:33 log.46676269._093911.job.log.1
[2025-10-13 03:33:39] -rw-------. 1 boincer umatlas       357 Oct 13 03:33 output.list
[2025-10-13 03:33:39] -rw-r--r--. 1 boincer umatlas       620 Oct 13 03:33 runtime_log
[2025-10-13 03:33:39] -rw-------. 1 boincer umatlas   1126400 Oct 13 03:33 result.tar.gz
[2025-10-13 03:33:39] -rw-r--r--. 1 boincer umatlas      8693 Oct 13 03:33 runtime_log.err
[2025-10-13 03:33:39] -rw-------. 1 boincer umatlas       648 Oct 13 03:33 5vyMDmqKMS8n9Rq4apOajLDm4fhM0noT9bVof3QYDm4QVMDmUPa5vm.diag
[2025-10-13 03:33:39] -rw-r--r--. 1 boincer umatlas     21657 Oct 13 03:33 stderr.txt
[2025-10-13 03:33:39] HITS file was successfully produced:
[2025-10-13 03:33:39] -rw-------. 1 boincer umatlas 196686920 Oct 13 03:32 shared/HITS.pool.root.1
[2025-10-13 03:33:39]  *** Contents of shared directory: ***
[2025-10-13 03:33:39] total 410192
[2025-10-13 03:33:39] -rw-r--r--. 2 boincer umatlas 221619397 Oct 13 02:05 ATLAS.root_0
[2025-10-13 03:33:39] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 02:05 start_atlas.sh
[2025-10-13 03:33:39] -rw-r--r--. 2 boincer umatlas    569679 Oct 13 02:05 input.tar.gz
[2025-10-13 03:33:39] -rw-------. 1 boincer umatlas 196686920 Oct 13 03:32 HITS.pool.root.1
[2025-10-13 03:33:39] -rw-------. 1 boincer umatlas   1126400 Oct 13 03:33 result.tar.gz
03:33:41 (1616984): run_atlas exited; CPU time 38896.497752
03:33:41 (1616984): called boinc_finish(0)

</stderr_txt>
]]>

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