Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
01:56:48 (19623): wrapper (7.7.26015): starting
01:56:48 (19623): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 01:56:48] Arguments: --nthreads 8
[2025-10-13 01:56:48] Threads: 8
[2025-10-13 01:56:48] Checking for CVMFS
[2025-10-13 01:56:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 01:56:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 01:56:48] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 01:56:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 01:56:49] 2.11.2.0 8539 53963 132128 151650 2 57 11683335 18432001 1833 130560 0 51402715 99.975 2301764 37369 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 01:56:49] CVMFS is ok
[2025-10-13 01:56:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 01:56:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 01:56:49] Further information can be found at the LHC@home message board.
[2025-10-13 01:56:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 01:56:49] Checking for apptainer binary...
[2025-10-13 01:56:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 01:56:49] Running /usr/bin/apptainer --version
[2025-10-13 01:56:49] apptainer version 1.3.2-1.el7
[2025-10-13 01:56:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 01:56:49] c-206-1.aglt2.org
[2025-10-13 01:56:49] apptainer works
[2025-10-13 01:56:49] Set ATHENA_PROC_NUMBER=8
[2025-10-13 01:56:49] Set ATHENA_CORE_NUMBER=8
[2025-10-13 01:56:49] Starting ATLAS job with PandaID=6841069679
[2025-10-13 01:56:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 04:47:23]  *** The last 200 lines of the pilot log: ***
[2025-10-13 04:47:23] 2025-10-13 08:46:33,809 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 04:47:23] 2025-10-13 08:46:33,809 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 04:47:23] 2025-10-13 08:46:33,809 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 04:47:23] 2025-10-13 08:46:33,814 | INFO     | fitting pss+swap vs Time
[2025-10-13 04:47:23] 2025-10-13 08:46:33,814 | INFO     | sum of square deviations: 1444149868.0
[2025-10-13 04:47:23] 2025-10-13 08:46:33,816 | INFO     | sum of deviations: -3795794967.0
[2025-10-13 04:47:23] 2025-10-13 08:46:33,816 | INFO     | mean x: 1760340109.0
[2025-10-13 04:47:23] 2025-10-13 08:46:33,816 | INFO     | mean y: 2506552.7425149702
[2025-10-13 04:47:23] 2025-10-13 08:46:33,816 | INFO     | -- intersect: 4629374078.066716
[2025-10-13 04:47:23] 2025-10-13 08:46:33,817 | INFO     | intersect: 4629374078.066716
[2025-10-13 04:47:23] 2025-10-13 08:46:33,817 | INFO     | chi2: 2.184816850933707
[2025-10-13 04:47:23] 2025-10-13 08:46:33,817 | INFO     | sum of square deviations: 1318277740.5
[2025-10-13 04:47:23] 2025-10-13 08:46:33,819 | INFO     | sum of deviations: 7231687402.499999
[2025-10-13 04:47:23] 2025-10-13 08:46:33,819 | INFO     | mean x: 1760339956.5
[2025-10-13 04:47:23] 2025-10-13 08:46:33,819 | INFO     | mean y: 2519586.203703704
[2025-10-13 04:47:23] 2025-10-13 08:46:33,819 | INFO     | -- intersect: -9654192270.821276
[2025-10-13 04:47:23] 2025-10-13 08:46:33,819 | INFO     | intersect: -9654192270.821276
[2025-10-13 04:47:23] 2025-10-13 08:46:33,820 | INFO     | chi2: 1.4176867718921562
[2025-10-13 04:47:23] 2025-10-13 08:46:33,820 | INFO     | current chi2=1.4176867718921562 (change=35.111871217658766 %)
[2025-10-13 04:47:23] 2025-10-13 08:46:33,820 | INFO     | sum of square deviations: 1199940638.0
[2025-10-13 04:47:23] 2025-10-13 08:46:33,821 | INFO     | sum of deviations: 6946740085.000002
[2025-10-13 04:47:23] 2025-10-13 08:46:33,822 | INFO     | mean x: 1760339804.0
[2025-10-13 04:47:23] 2025-10-13 08:46:33,822 | INFO     | mean y: 2519219.3949044584
[2025-10-13 04:47:23] 2025-10-13 08:46:33,822 | INFO     | -- intersect: -10188504146.602512
[2025-10-13 04:47:23] 2025-10-13 08:46:33,822 | INFO     | intersect: -10188504146.602512
[2025-10-13 04:47:23] 2025-10-13 08:46:33,823 | INFO     | chi2: 1.418548004264111
[2025-10-13 04:47:23] 2025-10-13 08:46:33,823 | INFO     | current chi2=1.418548004264111 (change=-0.06074912942901495 %)
[2025-10-13 04:47:23] 2025-10-13 08:46:33,823 | INFO     | right removable region: 156
[2025-10-13 04:47:23] 2025-10-13 08:46:33,823 | INFO     | sum of square deviations: 1318277740.5
[2025-10-13 04:47:23] 2025-10-13 08:46:33,825 | INFO     | sum of deviations: -27365063966.0
[2025-10-13 04:47:23] 2025-10-13 08:46:33,825 | INFO     | mean x: 1760340261.5
[2025-10-13 04:47:23] 2025-10-13 08:46:33,825 | INFO     | mean y: 2534691.111111111
[2025-10-13 04:47:23] 2025-10-13 08:46:33,825 | INFO     | -- intersect: 36544017853.53023
[2025-10-13 04:47:23] 2025-10-13 08:46:33,825 | INFO     | intersect: 36544017853.53023
[2025-10-13 04:47:23] 2025-10-13 08:46:33,826 | INFO     | chi2: 0.8489883493965809
[2025-10-13 04:47:23] 2025-10-13 08:46:33,826 | INFO     | current chi2=0.8489883493965809 (change=61.14144080160514 %)
[2025-10-13 04:47:23] 2025-10-13 08:46:33,826 | INFO     | sum of square deviations: 1199940638.0
[2025-10-13 04:47:23] 2025-10-13 08:46:33,827 | INFO     | sum of deviations: -22933705241.0
[2025-10-13 04:47:23] 2025-10-13 08:46:33,828 | INFO     | mean x: 1760340414.0
[2025-10-13 04:47:23] 2025-10-13 08:46:33,828 | INFO     | mean y: 2528959.8025477706
[2025-10-13 04:47:23] 2025-10-13 08:46:33,828 | INFO     | -- intersect: 33646800101.23539
[2025-10-13 04:47:23] 2025-10-13 08:46:33,828 | INFO     | intersect: 33646800101.23539
[2025-10-13 04:47:23] 2025-10-13 08:46:33,829 | INFO     | chi2: 0.8393224547223483
[2025-10-13 04:47:23] 2025-10-13 08:46:33,829 | INFO     | current chi2=0.8393224547223483 (change=1.1385191187962183 %)
[2025-10-13 04:47:23] 2025-10-13 08:46:33,829 | INFO     | left removable region: 20
[2025-10-13 04:47:23] 2025-10-13 08:46:33,829 | INFO     | sum of square deviations: 779958810.0
[2025-10-13 04:47:23] 2025-10-13 08:46:33,830 | INFO     | sum of deviations: -4249467460.9999995
[2025-10-13 04:47:23] 2025-10-13 08:46:33,830 | INFO     | mean x: 1760340383.5
[2025-10-13 04:47:23] 2025-10-13 08:46:33,831 | INFO     | mean y: 2532057.7352941176
[2025-10-13 04:47:23] 2025-10-13 08:46:33,831 | INFO     | -- intersect: 9593434915.756105
[2025-10-13 04:47:23] 2025-10-13 08:46:33,831 | INFO     | intersect: 9593434915.756105
[2025-10-13 04:47:23] 2025-10-13 08:46:33,831 | INFO     | chi2: 0.011957484460665866
[2025-10-13 04:47:23] 2025-10-13 08:46:33,832 | INFO     | -- intersect: 9593434915.756105
[2025-10-13 04:47:23] 2025-10-13 08:46:33,832 | INFO     | current memory leak: -5.45 B/s (using 136 data points, chi2=0.01)
[2025-10-13 04:47:23] 2025-10-13 08:46:33,832 | INFO     | could have reported an average CPU frequency of 2580 MHz (9 samples)
[2025-10-13 04:47:23] 2025-10-13 08:46:33,833 | INFO     | ..............................
[2025-10-13 04:47:23] 2025-10-13 08:46:33,833 | INFO     | . Timing measurements:
[2025-10-13 04:47:23] 2025-10-13 08:46:33,833 | INFO     | . get job = 0 s
[2025-10-13 04:47:23] 2025-10-13 08:46:33,833 | INFO     | . initial setup = 2 s
[2025-10-13 04:47:23] 2025-10-13 08:46:33,833 | INFO     | . payload setup = 5 s
[2025-10-13 04:47:23] 2025-10-13 08:46:33,833 | INFO     | . stage-in = 0 s
[2025-10-13 04:47:23] 2025-10-13 08:46:33,834 | INFO     | . payload execution = 10139 s
[2025-10-13 04:47:23] 2025-10-13 08:46:33,834 | INFO     | . stage-out = 1 s
[2025-10-13 04:47:23] 2025-10-13 08:46:33,834 | INFO     | . log creation = 0 s
[2025-10-13 04:47:23] 2025-10-13 08:46:33,834 | INFO     | ..............................
[2025-10-13 04:47:23] 2025-10-13 08:46:33,992 | INFO     | 
[2025-10-13 04:47:23] 2025-10-13 08:46:33,993 | INFO     | job summary report
[2025-10-13 04:47:23] 2025-10-13 08:46:33,993 | INFO     | --------------------------------------------------
[2025-10-13 04:47:23] 2025-10-13 08:46:33,993 | INFO     | PanDA job id: 6841069679
[2025-10-13 04:47:23] 2025-10-13 08:46:33,993 | INFO     | task id: 46676269
[2025-10-13 04:47:23] 2025-10-13 08:46:33,993 | INFO     | errors: (none)
[2025-10-13 04:47:23] 2025-10-13 08:46:33,993 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 04:47:23] 2025-10-13 08:46:33,994 | INFO     | pilot state: finished 
[2025-10-13 04:47:23] 2025-10-13 08:46:33,994 | INFO     | transexitcode: 0
[2025-10-13 04:47:23] 2025-10-13 08:46:33,994 | INFO     | exeerrorcode: 0
[2025-10-13 04:47:23] 2025-10-13 08:46:33,994 | INFO     | exeerrordiag: 
[2025-10-13 04:47:23] 2025-10-13 08:46:33,994 | INFO     | exitcode: 0
[2025-10-13 04:47:23] 2025-10-13 08:46:33,994 | INFO     | exitmsg: OK
[2025-10-13 04:47:23] 2025-10-13 08:46:33,994 | INFO     | cpuconsumptiontime: 77104 s
[2025-10-13 04:47:23] 2025-10-13 08:46:33,995 | INFO     | nevents: 400
[2025-10-13 04:47:23] 2025-10-13 08:46:33,995 | INFO     | neventsw: 0
[2025-10-13 04:47:23] 2025-10-13 08:46:33,995 | INFO     | pid: 29785
[2025-10-13 04:47:23] 2025-10-13 08:46:33,995 | INFO     | pgrp: 29785
[2025-10-13 04:47:23] 2025-10-13 08:46:33,995 | INFO     | corecount: 8
[2025-10-13 04:47:23] 2025-10-13 08:46:33,995 | INFO     | event service: False
[2025-10-13 04:47:23] 2025-10-13 08:46:33,996 | INFO     | sizes: {0: 2348686, 1: 2348885, 4: 2349147, 12: 2349175, 10149: 2377720, 10150: 2386718, 10152: 2386902, 10158: 2387160}
[2025-10-13 04:47:23] 2025-10-13 08:46:33,996 | INFO     | --------------------------------------------------
[2025-10-13 04:47:23] 2025-10-13 08:46:33,996 | INFO     | 
[2025-10-13 04:47:23] 2025-10-13 08:46:33,996 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 04:47:23] 2025-10-13 08:46:34,016 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 04:47:23] 2025-10-13 08:46:34,017 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 04:47:23] 2025-10-13 08:46:34,017 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 04:47:23] 2025-10-13 08:46:34,017 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 04:47:23] 2025-10-13 08:46:34,017 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 04:47:23] 2025-10-13 08:46:34,018 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 04:47:23] 2025-10-13 08:46:34,018 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 04:47:23] 2025-10-13 08:46:34,018 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 04:47:23] 2025-10-13 08:46:34,018 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 04:47:23] 2025-10-13 08:46:34,018 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 04:47:23] 2025-10-13 08:46:34,018 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 04:47:23] 2025-10-13 08:46:34,019 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 04:47:23] 2025-10-13 08:46:34,019 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 04:47:23] 2025-10-13 08:46:34,019 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 04:47:23] 2025-10-13 08:46:34,019 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 04:47:23] 2025-10-13 08:46:34,019 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 04:47:23] 2025-10-13 08:46:34,019 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 04:47:23] 2025-10-13 08:46:34,020 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 04:47:23] 2025-10-13 08:46:34,020 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 04:47:23] 2025-10-13 08:46:34,020 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 04:47:23] 2025-10-13 08:46:34,020 | INFO     | job 6841069679 has completed (purged errors)
[2025-10-13 04:47:23] 2025-10-13 08:46:34,020 | INFO     | overall cleanup function is called
[2025-10-13 04:47:23] 2025-10-13 08:46:35,028 | INFO     | --- collectZombieJob: --- 10, [29785]
[2025-10-13 04:47:23] 2025-10-13 08:46:35,028 | INFO     | zombie collector waiting for pid 29785
[2025-10-13 04:47:23] 2025-10-13 08:46:35,028 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 04:47:23] 2025-10-13 08:46:35,028 | INFO     | collected zombie processes
[2025-10-13 04:47:23] 2025-10-13 08:46:35,029 | INFO     | will attempt to kill all subprocesses of pid=29785
[2025-10-13 04:47:23] 2025-10-13 08:46:35,187 | INFO     | process IDs to be killed: [29785] (in reverse order)
[2025-10-13 04:47:23] 2025-10-13 08:46:35,231 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 04:47:23] 2025-10-13 08:46:35,232 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 04:47:23] 2025-10-13 08:46:35,234 | INFO     | did not find any defunct processes belonging to 29785
[2025-10-13 04:47:23] 2025-10-13 08:46:35,237 | INFO     | did not find any defunct processes belonging to 29785
[2025-10-13 04:47:23] 2025-10-13 08:46:35,237 | INFO     | ready for new job
[2025-10-13 04:47:23] 2025-10-13 08:46:35,237 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 04:47:23] 2025-10-13 08:46:35,238 | INFO     | ***************************************
[2025-10-13 04:47:23] 2025-10-13 08:46:35,238 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 04:47:23] 2025-10-13 08:46:35,238 | INFO     | ***************************************
[2025-10-13 04:47:23] 2025-10-13 08:46:35,239 | INFO     | 
[2025-10-13 04:47:23] 2025-10-13 08:46:35,239 | INFO     | architecture information:
[2025-10-13 04:47:23] 2025-10-13 08:46:35,240 | INFO     | executing command: cat /etc/os-release
[2025-10-13 04:47:23] 2025-10-13 08:46:35,252 | INFO     | cat /etc/os-release:
[2025-10-13 04:47:23] NAME="CentOS Linux"
[2025-10-13 04:47:23] VERSION="7 (Core)"
[2025-10-13 04:47:23] ID="centos"
[2025-10-13 04:47:23] ID_LIKE="rhel fedora"
[2025-10-13 04:47:23] VERSION_ID="7"
[2025-10-13 04:47:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 04:47:23] ANSI_COLOR="0;31"
[2025-10-13 04:47:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 04:47:23] HOME_URL="https://www.centos.org/"
[2025-10-13 04:47:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 04:47:23] 
[2025-10-13 04:47:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 04:47:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 04:47:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 04:47:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 04:47:23] 
[2025-10-13 04:47:23] 2025-10-13 08:46:35,253 | INFO     | ***************************************
[2025-10-13 04:47:23] 2025-10-13 08:46:35,756 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 04:47:23] 2025-10-13 08:46:35,784 | INFO     | sufficient remaining disk space (28266463232 B)
[2025-10-13 04:47:23] 2025-10-13 08:46:35,784 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 04:47:23] 2025-10-13 08:46:35,784 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 04:47:23] 2025-10-13 08:46:35,784 | INFO     | update_server=False
[2025-10-13 04:47:23] 2025-10-13 08:46:35,785 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 04:47:23] 2025-10-13 08:46:35,785 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 04:47:23] 2025-10-13 08:46:35,785 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 04:47:23] 2025-10-13 08:46:35,785 | INFO     | aborting loop
[2025-10-13 04:47:23] 2025-10-13 08:46:36,466 | INFO     | all data control threads have been joined
[2025-10-13 04:47:23] 2025-10-13 08:46:36,469 | INFO     | all payload control threads have been joined
[2025-10-13 04:47:23] 2025-10-13 08:46:36,569 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 04:47:23] 2025-10-13 08:46:36,790 | INFO     | [job] queue monitor thread has finished
[2025-10-13 04:47:23] 2025-10-13 08:46:36,791 | INFO     | [job] retrieve thread has finished
[2025-10-13 04:47:23] 2025-10-13 08:46:36,791 | INFO     | [job] job monitor thread has finished
[2025-10-13 04:47:23] 2025-10-13 08:46:37,032 | INFO     | [payload] failed_post thread has finished
[2025-10-13 04:47:23] 2025-10-13 08:46:37,096 | INFO     | [payload] validate_post thread has finished
[2025-10-13 04:47:23] 2025-10-13 08:46:37,421 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 04:47:23] 2025-10-13 08:46:37,471 | INFO     | [data] control thread has finished
[2025-10-13 04:47:23] 2025-10-13 08:46:37,472 | INFO     | all job control threads have been joined
[2025-10-13 04:47:23] 2025-10-13 08:46:37,476 | INFO     | [payload] control thread has finished
[2025-10-13 04:47:23] 2025-10-13 08:46:37,765 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 04:47:23] 2025-10-13 08:46:37,802 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 04:47:23] 2025-10-13 08:46:37,821 | INFO     | [job] validate thread has finished
[2025-10-13 04:47:23] 2025-10-13 08:46:38,095 | INFO     | [data] copytool_in thread has finished
[2025-10-13 04:47:23] 2025-10-13 08:46:38,160 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 04:47:23] 2025-10-13 08:46:38,477 | INFO     | [job] control thread has finished
[2025-10-13 04:47:23] 2025-10-13 08:46:38,574 | INFO     | [data] copytool_out thread has finished
[2025-10-13 04:47:23] 2025-10-13 08:46:38,767 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 04:47:23] 2025-10-13 08:46:42,774 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 04:47:23] 2025-10-13 08:47:06,750 | INFO     | PID=23319 has CPU usage=5.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-13 04:47:23] 2025-10-13 08:47:06,750 | INFO     | .. there are 3 such processes running
[2025-10-13 04:47:23] 2025-10-13 08:47:06,751 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 04:47:23] 2025-10-13 08:47:06,751 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 04:47:23] 2025-10-13 08:47:06,751 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 04:47:23] 2025-10-13 08:47:17,137 | INFO     | [monitor] cgroup control has ended
[2025-10-13 04:47:23] 2025-10-13 08:47:18,333 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140289488332608)>', '<ExcThread(monitor, started 140288915920640)>']
[2025-10-13 04:47:23] 2025-10-13 08:47:18,817 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 04:47:23] 2025-10-13 08:47:18,817 | INFO     | [monitor] control thread has ended
[2025-10-13 04:47:23] 2025-10-13 08:47:23,358 | INFO     | all workflow threads have been joined
[2025-10-13 04:47:23] 2025-10-13 08:47:23,359 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 04:47:23] 2025-10-13 08:47:23,359 | INFO     | traces error code: 0
[2025-10-13 04:47:23] 2025-10-13 08:47:23,359 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 04:47:23] 2025-10-13 08:47:23,491 [wrapper] ==== pilot stdout END ====
[2025-10-13 04:47:23] 2025-10-13 08:47:23,494 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 04:47:23] 2025-10-13 08:47:23,497 [wrapper] pilotpid: 23319
[2025-10-13 04:47:23] 2025-10-13 08:47:23,499 [wrapper] Pilot exit status: 0
[2025-10-13 04:47:23] 2025-10-13 08:47:23,508 [wrapper] pandaids: 6841069679
[2025-10-13 04:47:23] 2025-10-13 08:47:23,549 [wrapper] cleanup supervisor_pilot  2656 23320
[2025-10-13 04:47:23] 2025-10-13 08:47:23,553 [wrapper] Test setup, not cleaning
[2025-10-13 04:47:23] 2025-10-13 08:47:23,555 [wrapper] apfmon messages muted
[2025-10-13 04:47:23] 2025-10-13 08:47:23,557 [wrapper] ==== wrapper stdout END ====
[2025-10-13 04:47:23] 2025-10-13 08:47:23,559 [wrapper] ==== wrapper stderr END ====
[2025-10-13 04:47:23]  *** Error codes and diagnostics ***
[2025-10-13 04:47:23]     "exeErrorCode": 0,
[2025-10-13 04:47:23]     "exeErrorDiag": "",
[2025-10-13 04:47:23]     "pilotErrorCode": 0,
[2025-10-13 04:47:23]     "pilotErrorDiag": "",
[2025-10-13 04:47:23]  *** Listing of results directory ***
[2025-10-13 04:47:23] total 414560
[2025-10-13 04:47:23] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 20:48 pilot3.tar.gz
[2025-10-13 04:47:23] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 21:01 queuedata.json
[2025-10-13 04:47:23] -rwx------ 1 boincer umatlas     36292 Oct 12 21:02 runpilot2-wrapper.sh
[2025-10-13 04:47:23] -rw-r--r-- 1 boincer umatlas       100 Oct 13 01:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 04:47:23] -rwxr-xr-x 1 boincer umatlas      7986 Oct 13 01:56 run_atlas
[2025-10-13 04:47:23] -rw-r--r-- 1 boincer umatlas       105 Oct 13 01:56 job.xml
[2025-10-13 04:47:23] -rw-r--r-- 2 boincer umatlas 219976181 Oct 13 01:56 EVNT.46676267._004715.pool.root.1
[2025-10-13 04:47:23] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 01:56 start_atlas.sh
[2025-10-13 04:47:23] drwxrwx--x 2 boincer umatlas      4096 Oct 13 01:56 shared
[2025-10-13 04:47:23] -rw-r--r-- 2 boincer umatlas    569681 Oct 13 01:56 input.tar.gz
[2025-10-13 04:47:23] -rw-r--r-- 1 boincer umatlas         0 Oct 13 01:56 boinc_lockfile
[2025-10-13 04:47:23] -rw-r--r-- 1 boincer umatlas      2550 Oct 13 01:56 pandaJob.out
[2025-10-13 04:47:23] -rw------- 1 boincer umatlas    973230 Oct 13 01:56 agis_schedconf.cvmfs.json
[2025-10-13 04:47:23] -rw------- 1 boincer umatlas   1560580 Oct 13 01:56 agis_ddmendpoints.agis.ALL.json
[2025-10-13 04:47:23] drwx------ 5 boincer umatlas      4096 Oct 13 01:57 pilot3
[2025-10-13 04:47:23] -rw-r--r-- 1 boincer umatlas      5949 Oct 13 04:36 init_data.xml
[2025-10-13 04:47:23] -rw------- 1 boincer umatlas 196946088 Oct 13 04:45 HITS.46676269._093719.pool.root.1
[2025-10-13 04:47:23] -rw-r--r-- 1 boincer umatlas       531 Oct 13 04:46 boinc_task_state.xml
[2025-10-13 04:47:23] -rw------- 1 boincer umatlas      1055 Oct 13 04:46 memory_monitor_summary.json
[2025-10-13 04:47:23] -rw------- 1 boincer umatlas    414595 Oct 13 04:46 log.46676269._093719.job.log.tgz.1
[2025-10-13 04:47:23] -rw------- 1 boincer umatlas        95 Oct 13 04:46 pilot_heartbeat.json
[2025-10-13 04:47:23] -rw------- 1 boincer umatlas      7858 Oct 13 04:46 heartbeat.json
[2025-10-13 04:47:23] -rw-r--r-- 1 boincer umatlas      8192 Oct 13 04:47 boinc_mmap_file
[2025-10-13 04:47:23] -rw-r--r-- 1 boincer umatlas        28 Oct 13 04:47 wrapper_checkpoint.txt
[2025-10-13 04:47:23] -rw------- 1 boincer umatlas      4821 Oct 13 04:47 pilotlog.txt
[2025-10-13 04:47:23] -rw------- 1 boincer umatlas   1429201 Oct 13 04:47 log.46676269._093719.job.log.1
[2025-10-13 04:47:23] -rw------- 1 boincer umatlas       357 Oct 13 04:47 output.list
[2025-10-13 04:47:23] -rw-r--r-- 1 boincer umatlas       620 Oct 13 04:47 runtime_log
[2025-10-13 04:47:23] -rw------- 1 boincer umatlas   1863680 Oct 13 04:47 result.tar.gz
[2025-10-13 04:47:23] -rw-r--r-- 1 boincer umatlas      8699 Oct 13 04:47 runtime_log.err
[2025-10-13 04:47:23] -rw------- 1 boincer umatlas       660 Oct 13 04:47 LpPMDmO8LS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmtImNDm7jnjwm.diag
[2025-10-13 04:47:23] -rw-r--r-- 1 boincer umatlas     20866 Oct 13 04:47 stderr.txt
[2025-10-13 04:47:23] HITS file was successfully produced:
[2025-10-13 04:47:23] -rw------- 1 boincer umatlas 196946088 Oct 13 04:45 shared/HITS.pool.root.1
[2025-10-13 04:47:23]  *** Contents of shared directory: ***
[2025-10-13 04:47:23] total 409556
[2025-10-13 04:47:23] -rw-r--r-- 2 boincer umatlas 219976181 Oct 13 01:56 ATLAS.root_0
[2025-10-13 04:47:23] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 01:56 start_atlas.sh
[2025-10-13 04:47:23] -rw-r--r-- 2 boincer umatlas    569681 Oct 13 01:56 input.tar.gz
[2025-10-13 04:47:23] -rw------- 1 boincer umatlas 196946088 Oct 13 04:45 HITS.pool.root.1
[2025-10-13 04:47:23] -rw------- 1 boincer umatlas   1863680 Oct 13 04:47 result.tar.gz
04:47:24 (19623): run_atlas exited; CPU time 77281.818626
04:47:24 (19623): called boinc_finish(0)

</stderr_txt>
]]>

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