Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
21:27:18 (3404403): wrapper (7.7.26015): starting
21:27:18 (3404403): wrapper: running run_atlas (--nthreads 3)
[2025-10-13 21:27:18] Arguments: --nthreads 3
[2025-10-13 21:27:18] Threads: 3
[2025-10-13 21:27:18] Checking for CVMFS
[2025-10-13 21:27:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 21:27:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 21:27:18] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 21:27:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 21:27:18] 2.9.2.0 185998 10533 90964 151671 3 57 5233865 36864001 12 130560 0 8496589 99.991 360574 870 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 21:27:18] CVMFS is ok
[2025-10-13 21:27:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 21:27:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 21:27:18] Further information can be found at the LHC@home message board.
[2025-10-13 21:27:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 21:27:18] Checking for apptainer binary...
[2025-10-13 21:27:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 21:27:18] Running /usr/bin/apptainer --version
[2025-10-13 21:27:18] apptainer version 1.4.1-1.1
[2025-10-13 21:27:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 21:27:18] thA387a
[2025-10-13 21:27:18] apptainer works
[2025-10-13 21:27:18] Set ATHENA_PROC_NUMBER=3
[2025-10-13 21:27:18] Set ATHENA_CORE_NUMBER=3
[2025-10-13 21:27:18] Starting ATLAS job with PandaID=6841069397
[2025-10-13 21:27:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 22:48:35]  *** The last 200 lines of the pilot log: ***
[2025-10-13 22:48:35] 2025-10-13 20:47:41,742 | INFO     | [data] copytool_out thread has finished
[2025-10-13 22:48:35] 2025-10-13 20:47:42,138 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 22:48:35] 2025-10-13 20:47:42,177 | INFO     | [job] control thread has finished
[2025-10-13 22:48:35] 2025-10-13 20:47:42,584 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 22:48:35] 2025-10-13 20:47:46,591 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 22:48:35] 2025-10-13 20:48:10,373 | INFO     | PID=3408117 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 22:48:35] 2025-10-13 20:48:10,373 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 22:48:35] 2025-10-13 20:48:10,373 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 22:48:35] 2025-10-13 20:48:10,373 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 22:48:35] 2025-10-13 20:48:29,277 | INFO     | [monitor] cgroup control has ended
[2025-10-13 22:48:35] 2025-10-13 20:48:30,019 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140327486879552)>', '<ExcThread(monitor, started 140327134402304)>']
[2025-10-13 22:48:35] 2025-10-13 20:48:30,478 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 22:48:35] 2025-10-13 20:48:30,478 | INFO     | [monitor] control thread has ended
[2025-10-13 22:48:35] 2025-10-13 20:48:35,045 | INFO     | all workflow threads have been joined
[2025-10-13 22:48:35] 2025-10-13 20:48:35,045 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 22:48:35] 2025-10-13 20:48:35,046 | INFO     | traces error code: 0
[2025-10-13 22:48:35] 2025-10-13 20:48:35,046 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 22:48:35] 2025-10-13 20:48:35,096 [wrapper] ==== pilot stdout END ====
[2025-10-13 22:48:35] 2025-10-13 20:48:35,099 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 22:48:35] 2025-10-13 20:48:35,101 [wrapper] pilotpid: 3408117
[2025-10-13 22:48:35] 2025-10-13 20:48:35,103 [wrapper] Pilot exit status: 0
[2025-10-13 22:48:35] 2025-10-13 20:48:35,110 [wrapper] pandaids: 6841069397
[2025-10-13 22:48:35] 2025-10-13 20:48:35,126 [wrapper] cleanup supervisor_pilot 3427472 3408118
[2025-10-13 22:48:35] 2025-10-13 20:48:35,128 [wrapper] Test setup, not cleaning
[2025-10-13 22:48:35] 2025-10-13 20:48:35,131 [wrapper] apfmon messages muted
[2025-10-13 22:48:35] 2025-10-13 20:48:35,133 [wrapper] ==== wrapper stdout END ====
[2025-10-13 22:48:35] 2025-10-13 20:48:35,135 [wrapper] ==== wrapper stderr END ====
[2025-10-13 22:48:35]  *** Error codes and diagnostics ***
[2025-10-13 22:48:35]     "exeErrorCode": 0,
[2025-10-13 22:48:35]     "exeErrorDiag": "",
[2025-10-13 22:48:35]     "pilotErrorCode": 0,
[2025-10-13 22:48:35]     "pilotErrorDiag": "",
[2025-10-13 22:48:35]  *** Listing of results directory ***
[2025-10-13 22:48:35] total 413912
[2025-10-13 22:48:35] -rw-r--r-- 1 boinc boinc    557409 Oct 13 02:48 pilot3.tar.gz
[2025-10-13 22:48:35] -rw-r--r-- 1 boinc boinc      5112 Oct 13 02:53 queuedata.json
[2025-10-13 22:48:35] -rwx------ 1 boinc boinc     36292 Oct 13 02:53 runpilot2-wrapper.sh
[2025-10-13 22:48:35] -rw-r--r-- 1 boinc boinc       100 Oct 13 21:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 22:48:35] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 21:27 run_atlas
[2025-10-13 22:48:35] -rw-r--r-- 1 boinc boinc       105 Oct 13 21:27 job.xml
[2025-10-13 22:48:35] -rw-r--r-- 2 boinc boinc 221647353 Oct 13 21:27 EVNT.46676267._004708.pool.root.1
[2025-10-13 22:48:35] -rw-r--r-- 2 boinc boinc    569681 Oct 13 21:27 input.tar.gz
[2025-10-13 22:48:35] -rw-r--r-- 2 boinc boinc     15120 Oct 13 21:27 start_atlas.sh
[2025-10-13 22:48:35] drwxrwx--x 2 boinc boinc      4096 Oct 13 21:27 shared
[2025-10-13 22:48:35] -rw-r--r-- 1 boinc boinc         0 Oct 13 21:27 boinc_setup_complete
[2025-10-13 22:48:35] -rw-r--r-- 1 boinc boinc      6439 Oct 13 21:27 init_data.xml
[2025-10-13 22:48:35] -rw-r--r-- 1 boinc boinc         0 Oct 13 21:27 boinc_lockfile
[2025-10-13 22:48:35] -rw-r--r-- 1 boinc boinc      2550 Oct 13 21:27 pandaJob.out
[2025-10-13 22:48:35] -rw------- 1 boinc boinc    972799 Oct 13 21:27 agis_schedconf.cvmfs.json
[2025-10-13 22:48:35] -rw------- 1 boinc boinc   1560580 Oct 13 21:27 agis_ddmendpoints.agis.ALL.json
[2025-10-13 22:48:35] drwx------ 5 boinc boinc      4096 Oct 13 21:27 pilot3
[2025-10-13 22:48:35] -rw------- 1 boinc boinc 196399797 Oct 13 22:47 HITS.46676269._093529.pool.root.1
[2025-10-13 22:48:35] -rw-r--r-- 1 boinc boinc       530 Oct 13 22:47 boinc_task_state.xml
[2025-10-13 22:48:35] -rw------- 1 boinc boinc      1021 Oct 13 22:47 memory_monitor_summary.json
[2025-10-13 22:48:35] -rw------- 1 boinc boinc    244026 Oct 13 22:47 log.46676269._093529.job.log.tgz.1
[2025-10-13 22:48:35] -rw------- 1 boinc boinc      7771 Oct 13 22:47 heartbeat.json
[2025-10-13 22:48:35] -rw------- 1 boinc boinc        95 Oct 13 22:48 pilot_heartbeat.json
[2025-10-13 22:48:35] -rw-r--r-- 1 boinc boinc      8192 Oct 13 22:48 boinc_mmap_file
[2025-10-13 22:48:35] -rw-r--r-- 1 boinc boinc        27 Oct 13 22:48 wrapper_checkpoint.txt
[2025-10-13 22:48:35] -rw------- 1 boinc boinc      4938 Oct 13 22:48 pilotlog.txt
[2025-10-13 22:48:35] -rw------- 1 boinc boinc    709347 Oct 13 22:48 log.46676269._093529.job.log.1
[2025-10-13 22:48:35] -rw------- 1 boinc boinc       357 Oct 13 22:48 output.list
[2025-10-13 22:48:35] -rw-r--r-- 1 boinc boinc       620 Oct 13 22:48 runtime_log
[2025-10-13 22:48:35] -rw------- 1 boinc boinc    972800 Oct 13 22:48 result.tar.gz
[2025-10-13 22:48:35] -rw-r--r-- 1 boinc boinc      8782 Oct 13 22:48 runtime_log.err
[2025-10-13 22:48:35] -rw------- 1 boinc boinc       659 Oct 13 22:48 4MaNDmqzLS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmVGmNDmSSHKkm.diag
[2025-10-13 22:48:35] -rw-r--r-- 1 boinc boinc      5243 Oct 13 22:48 stderr.txt
[2025-10-13 22:48:35] HITS file was successfully produced:
[2025-10-13 22:48:35] -rw------- 1 boinc boinc 196399797 Oct 13 22:47 shared/HITS.pool.root.1
[2025-10-13 22:48:35]  *** Contents of shared directory: ***
[2025-10-13 22:48:35] total 409792
[2025-10-13 22:48:35] -rw-r--r-- 2 boinc boinc 221647353 Oct 13 21:27 ATLAS.root_0
[2025-10-13 22:48:35] -rw-r--r-- 2 boinc boinc    569681 Oct 13 21:27 input.tar.gz
[2025-10-13 22:48:35] -rw-r--r-- 2 boinc boinc     15120 Oct 13 21:27 start_atlas.sh
[2025-10-13 22:48:35] -rw------- 1 boinc boinc 196399797 Oct 13 22:47 HITS.pool.root.1
[2025-10-13 22:48:35] -rw------- 1 boinc boinc    972800 Oct 13 22:48 result.tar.gz
22:48:36 (3404403): run_atlas exited; CPU time 13759.657175
22:48:36 (3404403): called boinc_finish(0)

</stderr_txt>
]]>

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