Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:34:13 (445924): wrapper (7.7.26015): starting
11:34:13 (445924): wrapper: running run_atlas (--nthreads 12)
[2025-10-13 11:34:13] Arguments: --nthreads 12
[2025-10-13 11:34:13] Threads: 12
[2025-10-13 11:34:13] Checking for CVMFS
[2025-10-13 11:34:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 11:34:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 11:34:14] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 11:34:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 11:34:14] 2.13.2.0 8715 30314 233764 151656 1 188 40575384 46080001 6411 130560 0 206573000 99.893 56076802 21598 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-10-13 11:34:14] CVMFS is ok
[2025-10-13 11:34:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 11:34:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 11:34:14] Further information can be found at the LHC@home message board.
[2025-10-13 11:34:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 11:34:14] Checking for apptainer binary...
[2025-10-13 11:34:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 11:34:14] Running /usr/bin/apptainer --version
[2025-10-13 11:34:14] apptainer version 1.4.2-1.el9
[2025-10-13 11:34:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 11:34:14] mff2104.farm.particle.cz
[2025-10-13 11:34:14] apptainer works
[2025-10-13 11:34:14] Set ATHENA_PROC_NUMBER=12
[2025-10-13 11:34:14] Set ATHENA_CORE_NUMBER=12
[2025-10-13 11:34:14] Starting ATLAS job with PandaID=6841069395
[2025-10-13 11:34:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 12:32:38]  *** The last 200 lines of the pilot log: ***
[2025-10-13 12:32:38]  workdir=None
[2025-10-13 12:32:38] ]
[2025-10-13 12:32:38] 2025-10-13 10:31:33,861 | INFO     | transferring file log.46676269._093527.job.log.tgz.1 from /scratch/.boinc/slots/6/PanDA_Pilot-6841069395/log.46676269._093527.job.log.tgz.1 to /scratch/.boinc/slot
[2025-10-13 12:32:38] 2025-10-13 10:31:33,861 | INFO     | executing command: /usr/bin/env mv /scratch/.boinc/slots/6/PanDA_Pilot-6841069395/log.46676269._093527.job.log.tgz.1 /scratch/.boinc/slots/6/log.46676269._093527.j
[2025-10-13 12:32:38] 2025-10-13 10:31:33,884 | INFO     | adding to output.list: log.46676269._093527.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/af/e6/log.46676269._093527.job.log.tg
[2025-10-13 12:32:38] 2025-10-13 10:31:33,885 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 12:32:38] 2025-10-13 10:31:33,885 | INFO     | summary of transferred files:
[2025-10-13 12:32:38] 2025-10-13 10:31:33,885 | INFO     |  -- lfn=log.46676269._093527.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 12:32:38] 2025-10-13 10:31:33,885 | INFO     | stage-out finished correctly
[2025-10-13 12:32:38] 2025-10-13 10:31:33,929 | INFO     | time since job start (3427s) is within the limit (172800.0s)
[2025-10-13 12:32:38] 2025-10-13 10:31:35,883 | INFO     | monitor loop #250: job 0:6841069395 is in state 'finished'
[2025-10-13 12:32:38] 2025-10-13 10:31:35,883 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 12:32:38] 2025-10-13 10:31:35,947 | INFO     | time since job start (3429s) is within the limit (172800.0s)
[2025-10-13 12:32:38] 2025-10-13 10:31:37,399 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 12:32:38] 2025-10-13 10:31:37,950 | INFO     | time since job start (3431s) is within the limit (172800.0s)
[2025-10-13 12:32:38] 2025-10-13 10:31:38,386 | INFO     | monitor loop #251: job 0:6841069395 is in state 'finished'
[2025-10-13 12:32:38] 2025-10-13 10:31:38,387 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 12:32:38] 2025-10-13 10:31:39,471 | INFO     | job 6841069395 has state=finished
[2025-10-13 12:32:38] 2025-10-13 10:31:39,471 | INFO     | preparing for final server update for job 6841069395 in state='finished'
[2025-10-13 12:32:38] 2025-10-13 10:31:39,472 | INFO     | this job has now completed (state=finished)
[2025-10-13 12:32:38] 2025-10-13 10:31:39,472 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 12:32:38] 2025-10-13 10:31:39,472 | INFO     | log transfer has been attempted: DONE
[2025-10-13 12:32:38] 2025-10-13 10:31:39,472 | INFO     | job 6841069395 has finished - writing final server update
[2025-10-13 12:32:38] 2025-10-13 10:31:39,473 | INFO     | total number of processed events: 400 (read)
[2025-10-13 12:32:38] 2025-10-13 10:31:39,473 | INFO     | executing command: lscpu
[2025-10-13 12:32:38] 2025-10-13 10:31:39,553 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 12:32:38] 2025-10-13 10:31:39,956 | INFO     | time since job start (3433s) is within the limit (172800.0s)
[2025-10-13 12:32:38] 2025-10-13 10:31:40,889 | INFO     | monitor loop #252: job 0:6841069395 is in state 'finished'
[2025-10-13 12:32:38] 2025-10-13 10:31:40,889 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 12:32:38] 2025-10-13 10:31:41,375 | INFO     | PID=450004 has CPU usage=9.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-13 12:32:38] 2025-10-13 10:31:41,375 | INFO     | .. there are 8 such processes running
[2025-10-13 12:32:38] 2025-10-13 10:31:42,376 | INFO     | time since job start (3436s) is within the limit (172800.0s)
[2025-10-13 12:32:38] 2025-10-13 10:31:43,393 | INFO     | monitor loop #253: job 0:6841069395 is in state 'finished'
[2025-10-13 12:32:38] 2025-10-13 10:31:43,393 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 12:32:38] 2025-10-13 10:31:44,381 | INFO     | time since job start (3438s) is within the limit (172800.0s)
[2025-10-13 12:32:38] 2025-10-13 10:31:44,917 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 12:32:38] 2025-10-13 10:31:44,931 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2749.277406250001
[2025-10-13 12:32:38] 2025-10-13 10:31:44,948 | INFO     | using path: /scratch/.boinc/slots/6/PanDA_Pilot-6841069395/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 12:32:38] 2025-10-13 10:31:44,949 | INFO     | extracted standard info from prmon json
[2025-10-13 12:32:38] 2025-10-13 10:31:44,949 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 12:32:38] 2025-10-13 10:31:44,949 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 12:32:38] 2025-10-13 10:31:44,949 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 12:32:38] 2025-10-13 10:31:44,950 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 12:32:38] 2025-10-13 10:31:44,951 | INFO     | fitting pss+swap vs Time
[2025-10-13 12:32:38] 2025-10-13 10:31:44,951 | INFO     | sum of square deviations: 36465800.0
[2025-10-13 12:32:38] 2025-10-13 10:31:44,951 | INFO     | sum of deviations: -849978575.0
[2025-10-13 12:32:38] 2025-10-13 10:31:44,951 | INFO     | mean x: 1760349865.0
[2025-10-13 12:32:38] 2025-10-13 10:31:44,951 | INFO     | mean y: 2720153.2448979593
[2025-10-13 12:32:38] 2025-10-13 10:31:44,952 | INFO     | -- intersect: 41034582055.469505
[2025-10-13 12:32:38] 2025-10-13 10:31:44,952 | INFO     | intersect: 41034582055.469505
[2025-10-13 12:32:38] 2025-10-13 10:31:44,952 | INFO     | chi2: 0.0024259787191314394
[2025-10-13 12:32:38] 2025-10-13 10:31:44,952 | INFO     | -- intersect: 41034582055.469505
[2025-10-13 12:32:38] 2025-10-13 10:31:44,952 | INFO     | current memory leak: -23.31 B/s (using 49 data points, chi2=0.00)
[2025-10-13 12:32:38] 2025-10-13 10:31:44,952 | INFO     | could have reported an average CPU frequency of 2752 MHz (5 samples)
[2025-10-13 12:32:38] 2025-10-13 10:31:44,952 | INFO     | ..............................
[2025-10-13 12:32:38] 2025-10-13 10:31:44,953 | INFO     | . Timing measurements:
[2025-10-13 12:32:38] 2025-10-13 10:31:44,953 | INFO     | . get job = 0 s
[2025-10-13 12:32:38] 2025-10-13 10:31:44,953 | INFO     | . initial setup = 1 s
[2025-10-13 12:32:38] 2025-10-13 10:31:44,953 | INFO     | . payload setup = 6 s
[2025-10-13 12:32:38] 2025-10-13 10:31:44,953 | INFO     | . stage-in = 0 s
[2025-10-13 12:32:38] 2025-10-13 10:31:44,953 | INFO     | . payload execution = 3400 s
[2025-10-13 12:32:38] 2025-10-13 10:31:44,953 | INFO     | . stage-out = 0 s
[2025-10-13 12:32:38] 2025-10-13 10:31:44,953 | INFO     | . log creation = 0 s
[2025-10-13 12:32:38] 2025-10-13 10:31:44,953 | INFO     | ..............................
[2025-10-13 12:32:38] 2025-10-13 10:31:45,201 | INFO     | 
[2025-10-13 12:32:38] 2025-10-13 10:31:45,202 | INFO     | job summary report
[2025-10-13 12:32:38] 2025-10-13 10:31:45,202 | INFO     | --------------------------------------------------
[2025-10-13 12:32:38] 2025-10-13 10:31:45,202 | INFO     | PanDA job id: 6841069395
[2025-10-13 12:32:38] 2025-10-13 10:31:45,202 | INFO     | task id: 46676269
[2025-10-13 12:32:38] 2025-10-13 10:31:45,202 | INFO     | errors: (none)
[2025-10-13 12:32:38] 2025-10-13 10:31:45,202 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 12:32:38] 2025-10-13 10:31:45,202 | INFO     | pilot state: finished 
[2025-10-13 12:32:38] 2025-10-13 10:31:45,202 | INFO     | transexitcode: 0
[2025-10-13 12:32:38] 2025-10-13 10:31:45,202 | INFO     | exeerrorcode: 0
[2025-10-13 12:32:38] 2025-10-13 10:31:45,202 | INFO     | exeerrordiag: 
[2025-10-13 12:32:38] 2025-10-13 10:31:45,202 | INFO     | exitcode: 0
[2025-10-13 12:32:38] 2025-10-13 10:31:45,202 | INFO     | exitmsg: OK
[2025-10-13 12:32:38] 2025-10-13 10:31:45,202 | INFO     | cpuconsumptiontime: 36122 s
[2025-10-13 12:32:38] 2025-10-13 10:31:45,203 | INFO     | nevents: 400
[2025-10-13 12:32:38] 2025-10-13 10:31:45,203 | INFO     | neventsw: 0
[2025-10-13 12:32:38] 2025-10-13 10:31:45,203 | INFO     | pid: 457084
[2025-10-13 12:32:38] 2025-10-13 10:31:45,203 | INFO     | pgrp: 457084
[2025-10-13 12:32:38] 2025-10-13 10:31:45,203 | INFO     | corecount: 12
[2025-10-13 12:32:38] 2025-10-13 10:31:45,203 | INFO     | event service: False
[2025-10-13 12:32:38] 2025-10-13 10:31:45,203 | INFO     | sizes: {0: 2348856, 6: 2349118, 11: 2349146, 3408: 2374862, 3409: 2374861, 3411: 2383917, 3414: 2384101, 3422: 2384327}
[2025-10-13 12:32:38] 2025-10-13 10:31:45,203 | INFO     | --------------------------------------------------
[2025-10-13 12:32:38] 2025-10-13 10:31:45,203 | INFO     | 
[2025-10-13 12:32:38] 2025-10-13 10:31:45,203 | INFO     | executing command: ls -lF /scratch/.boinc/slots/6
[2025-10-13 12:32:38] 2025-10-13 10:31:45,231 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 12:32:38] 2025-10-13 10:31:45,231 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 12:32:38] 2025-10-13 10:31:45,231 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 12:32:38] 2025-10-13 10:31:45,231 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 12:32:38] 2025-10-13 10:31:45,231 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 12:32:38] 2025-10-13 10:31:45,232 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 12:32:38] 2025-10-13 10:31:45,232 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 12:32:38] 2025-10-13 10:31:45,232 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 12:32:38] 2025-10-13 10:31:45,232 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 12:32:38] 2025-10-13 10:31:45,232 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 12:32:38] 2025-10-13 10:31:45,232 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 12:32:38] 2025-10-13 10:31:45,232 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 12:32:38] 2025-10-13 10:31:45,232 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 12:32:38] 2025-10-13 10:31:45,232 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 12:32:38] 2025-10-13 10:31:45,232 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 12:32:38] 2025-10-13 10:31:45,232 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 12:32:38] 2025-10-13 10:31:45,232 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 12:32:38] 2025-10-13 10:31:45,233 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 12:32:38] 2025-10-13 10:31:45,233 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 12:32:38] 2025-10-13 10:31:45,233 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 12:32:38] 2025-10-13 10:31:45,233 | INFO     | job 6841069395 has completed (purged errors)
[2025-10-13 12:32:38] 2025-10-13 10:31:45,233 | INFO     | overall cleanup function is called
[2025-10-13 12:32:38] 2025-10-13 10:31:46,241 | INFO     | --- collectZombieJob: --- 10, [457084]
[2025-10-13 12:32:38] 2025-10-13 10:31:46,306 | INFO     | zombie collector waiting for pid 457084
[2025-10-13 12:32:38] 2025-10-13 10:31:46,306 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 12:32:38] 2025-10-13 10:31:46,306 | INFO     | collected zombie processes
[2025-10-13 12:32:38] 2025-10-13 10:31:46,306 | INFO     | will attempt to kill all subprocesses of pid=457084
[2025-10-13 12:32:38] 2025-10-13 10:31:46,636 | INFO     | process IDs to be killed: [457084] (in reverse order)
[2025-10-13 12:32:38] 2025-10-13 10:31:46,743 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 12:32:38] 2025-10-13 10:31:46,743 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 12:32:38] 2025-10-13 10:31:46,755 | INFO     | did not find any defunct processes belonging to 457084
[2025-10-13 12:32:38] 2025-10-13 10:31:46,764 | INFO     | did not find any defunct processes belonging to 457084
[2025-10-13 12:32:38] 2025-10-13 10:31:46,765 | INFO     | ready for new job
[2025-10-13 12:32:38] 2025-10-13 10:31:46,765 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 12:32:38] 2025-10-13 10:31:46,766 | INFO     | ***************************************
[2025-10-13 12:32:38] 2025-10-13 10:31:46,767 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 12:32:38] 2025-10-13 10:31:46,767 | INFO     | ***************************************
[2025-10-13 12:32:38] 2025-10-13 10:31:46,767 | INFO     | 
[2025-10-13 12:32:38] 2025-10-13 10:31:46,773 | INFO     | architecture information:
[2025-10-13 12:32:38] 2025-10-13 10:31:46,773 | INFO     | executing command: cat /etc/os-release
[2025-10-13 12:32:38] 2025-10-13 10:31:46,793 | INFO     | cat /etc/os-release:
[2025-10-13 12:32:38] NAME="CentOS Linux"
[2025-10-13 12:32:38] VERSION="7 (Core)"
[2025-10-13 12:32:38] ID="centos"
[2025-10-13 12:32:38] ID_LIKE="rhel fedora"
[2025-10-13 12:32:38] VERSION_ID="7"
[2025-10-13 12:32:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 12:32:38] ANSI_COLOR="0;31"
[2025-10-13 12:32:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 12:32:38] HOME_URL="https://www.centos.org/"
[2025-10-13 12:32:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 12:32:38] 
[2025-10-13 12:32:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 12:32:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 12:32:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 12:32:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 12:32:38] 
[2025-10-13 12:32:38] 2025-10-13 10:31:46,793 | INFO     | ***************************************
[2025-10-13 12:32:38] 2025-10-13 10:31:47,296 | INFO     | executing command: df -mP /scratch/.boinc/slots/6
[2025-10-13 12:32:38] 2025-10-13 10:31:47,317 | INFO     | sufficient remaining disk space (1681439850496 B)
[2025-10-13 12:32:38] 2025-10-13 10:31:47,318 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 12:32:38] 2025-10-13 10:31:47,318 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 12:32:38] 2025-10-13 10:31:47,318 | INFO     | update_server=False
[2025-10-13 12:32:38] 2025-10-13 10:31:47,318 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 12:32:38] 2025-10-13 10:31:47,318 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 12:32:38] 2025-10-13 10:31:47,319 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 12:32:38] 2025-10-13 10:31:47,320 | INFO     | aborting loop
[2025-10-13 12:32:38] 2025-10-13 10:31:47,611 | INFO     | all data control threads have been joined
[2025-10-13 12:32:38] 2025-10-13 10:31:48,001 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 12:32:38] 2025-10-13 10:31:48,235 | INFO     | all job control threads have been joined
[2025-10-13 12:32:38] 2025-10-13 10:31:48,324 | INFO     | [job] retrieve thread has finished
[2025-10-13 12:32:38] 2025-10-13 10:31:48,325 | INFO     | [job] job monitor thread has finished
[2025-10-13 12:32:38] 2025-10-13 10:31:48,616 | INFO     | [data] control thread has finished
[2025-10-13 12:32:38] 2025-10-13 10:31:48,624 | INFO     | all payload control threads have been joined
[2025-10-13 12:32:38] 2025-10-13 10:31:48,883 | INFO     | [data] copytool_in thread has finished
[2025-10-13 12:32:38] 2025-10-13 10:31:48,884 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 12:32:38] 2025-10-13 10:31:48,981 | INFO     | [payload] validate_post thread has finished
[2025-10-13 12:32:38] 2025-10-13 10:31:49,209 | INFO     | [job] validate thread has finished
[2025-10-13 12:32:38] 2025-10-13 10:31:49,240 | INFO     | [job] control thread has finished
[2025-10-13 12:32:38] 2025-10-13 10:31:49,325 | INFO     | [data] copytool_out thread has finished
[2025-10-13 12:32:38] 2025-10-13 10:31:49,388 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 12:32:38] 2025-10-13 10:31:49,630 | INFO     | [payload] control thread has finished
[2025-10-13 12:32:38] 2025-10-13 10:31:49,711 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 12:32:38] 2025-10-13 10:31:49,737 | INFO     | [payload] failed_post thread has finished
[2025-10-13 12:32:38] 2025-10-13 10:31:50,053 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 12:32:38] 2025-10-13 10:31:51,059 | INFO     | [job] queue monitor thread has finished
[2025-10-13 12:32:38] 2025-10-13 10:31:52,007 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 12:32:38] 2025-10-13 10:31:57,445 | INFO     | job.realtimelogging is not enabled
[2025-10-13 12:32:38] 2025-10-13 10:31:58,451 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 12:32:38] 2025-10-13 10:32:17,872 | INFO     | PID=450004 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-13 12:32:38] 2025-10-13 10:32:17,872 | INFO     | .. there are 8 such processes running
[2025-10-13 12:32:38] 2025-10-13 10:32:17,872 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 12:32:38] 2025-10-13 10:32:17,872 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 12:32:38] 2025-10-13 10:32:17,872 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 12:32:38] 2025-10-13 10:32:31,646 | INFO     | [monitor] cgroup control has ended
[2025-10-13 12:32:38] 2025-10-13 10:32:32,720 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140662142191424)>', '<ExcThread(monitor, started 140661521118976)>']
[2025-10-13 12:32:38] 2025-10-13 10:32:32,935 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 12:32:38] 2025-10-13 10:32:32,935 | INFO     | [monitor] control thread has ended
[2025-10-13 12:32:38] 2025-10-13 10:32:37,746 | INFO     | all workflow threads have been joined
[2025-10-13 12:32:38] 2025-10-13 10:32:37,746 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 12:32:38] 2025-10-13 10:32:37,746 | INFO     | traces error code: 0
[2025-10-13 12:32:38] 2025-10-13 10:32:37,747 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 12:32:38] 2025-10-13 10:32:37,864 [wrapper] ==== pilot stdout END ====
[2025-10-13 12:32:38] 2025-10-13 10:32:37,868 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 12:32:38] 2025-10-13 10:32:37,871 [wrapper] pilotpid: 450004
[2025-10-13 12:32:38] 2025-10-13 10:32:37,875 [wrapper] Pilot exit status: 0
[2025-10-13 12:32:38] 2025-10-13 10:32:37,890 [wrapper] pandaids: 6841069395
[2025-10-13 12:32:38] 2025-10-13 10:32:37,975 [wrapper] cleanup supervisor_pilot  618955 450005
[2025-10-13 12:32:38] 2025-10-13 10:32:37,979 [wrapper] Test setup, not cleaning
[2025-10-13 12:32:38] 2025-10-13 10:32:37,983 [wrapper] apfmon messages muted
[2025-10-13 12:32:38] 2025-10-13 10:32:37,987 [wrapper] ==== wrapper stdout END ====
[2025-10-13 12:32:38] 2025-10-13 10:32:37,990 [wrapper] ==== wrapper stderr END ====
[2025-10-13 12:32:38]  *** Error codes and diagnostics ***
[2025-10-13 12:32:38]     "exeErrorCode": 0,
[2025-10-13 12:32:38]     "exeErrorDiag": "",
[2025-10-13 12:32:38]     "pilotErrorCode": 0,
[2025-10-13 12:32:38]     "pilotErrorDiag": "",
[2025-10-13 12:32:38]  *** Listing of results directory ***
[2025-10-13 12:32:38] total 416972
[2025-10-13 12:32:38] -rw-r--r-- 1 boinc boinc    557409 Oct 13 02:48 pilot3.tar.gz
[2025-10-13 12:32:38] -rw-r--r-- 1 boinc boinc      5112 Oct 13 02:53 queuedata.json
[2025-10-13 12:32:38] -rwx------ 1 boinc boinc     36292 Oct 13 02:53 runpilot2-wrapper.sh
[2025-10-13 12:32:38] -rw-r--r-- 1 boinc boinc       100 Oct 13 11:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 12:32:38] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 11:34 run_atlas
[2025-10-13 12:32:38] -rw-r--r-- 1 boinc boinc       105 Oct 13 11:34 job.xml
[2025-10-13 12:32:38] -rw-r--r-- 2 boinc boinc 221647353 Oct 13 11:34 EVNT.46676267._004708.pool.root.1
[2025-10-13 12:32:38] -rw-r--r-- 1 boinc boinc      6665 Oct 13 11:34 init_data.xml
[2025-10-13 12:32:38] -rw-r--r-- 2 boinc boinc     15120 Oct 13 11:34 start_atlas.sh
[2025-10-13 12:32:38] drwxrwx--x 2 boinc boinc      4096 Oct 13 11:34 shared
[2025-10-13 12:32:38] -rw-r--r-- 2 boinc boinc    569681 Oct 13 11:34 input.tar.gz
[2025-10-13 12:32:38] -rw-r--r-- 1 boinc boinc         0 Oct 13 11:34 boinc_lockfile
[2025-10-13 12:32:38] -rw-r--r-- 1 boinc boinc      2549 Oct 13 11:34 pandaJob.out
[2025-10-13 12:32:38] -rw------- 1 boinc boinc    972849 Oct 13 11:34 agis_schedconf.cvmfs.json
[2025-10-13 12:32:38] -rw------- 1 boinc boinc   1560580 Oct 13 11:34 agis_ddmendpoints.agis.ALL.json
[2025-10-13 12:32:38] drwx------ 5 boinc boinc      4096 Oct 13 11:34 pilot3
[2025-10-13 12:32:38] -rw------- 1 boinc boinc 199686644 Oct 13 12:31 HITS.46676269._093527.pool.root.1
[2025-10-13 12:32:38] -rw-r--r-- 1 boinc boinc       529 Oct 13 12:31 boinc_task_state.xml
[2025-10-13 12:32:38] -rw------- 1 boinc boinc      1022 Oct 13 12:31 memory_monitor_summary.json
[2025-10-13 12:32:38] -rw------- 1 boinc boinc    352887 Oct 13 12:31 log.46676269._093527.job.log.tgz.1
[2025-10-13 12:32:38] -rw------- 1 boinc boinc        95 Oct 13 12:31 pilot_heartbeat.json
[2025-10-13 12:32:38] -rw------- 1 boinc boinc      7781 Oct 13 12:31 heartbeat.json
[2025-10-13 12:32:38] -rw-r--r-- 1 boinc boinc        27 Oct 13 12:32 wrapper_checkpoint.txt
[2025-10-13 12:32:38] -rw-r--r-- 1 boinc boinc      8192 Oct 13 12:32 boinc_mmap_file
[2025-10-13 12:32:38] -rw------- 1 boinc boinc      4897 Oct 13 12:32 pilotlog.txt
[2025-10-13 12:32:38] -rw------- 1 boinc boinc    514148 Oct 13 12:32 log.46676269._093527.job.log.1
[2025-10-13 12:32:38] -rw------- 1 boinc boinc       357 Oct 13 12:32 output.list
[2025-10-13 12:32:38] -rw-r--r-- 1 boinc boinc       620 Oct 13 12:32 runtime_log
[2025-10-13 12:32:38] -rw------- 1 boinc boinc    890880 Oct 13 12:32 result.tar.gz
[2025-10-13 12:32:38] -rw-r--r-- 1 boinc boinc      8764 Oct 13 12:32 runtime_log.err
[2025-10-13 12:32:38] -rw------- 1 boinc boinc       663 Oct 13 12:32 01XNDmqzLS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmTGmNDmDbb3gm.diag
[2025-10-13 12:32:38] -rw-r--r-- 1 boinc boinc     22350 Oct 13 12:32 stderr.txt
[2025-10-13 12:32:38] HITS file was successfully produced:
[2025-10-13 12:32:38] -rw------- 1 boinc boinc 199686644 Oct 13 12:31 shared/HITS.pool.root.1
[2025-10-13 12:32:38]  *** Contents of shared directory: ***
[2025-10-13 12:32:38] total 412920
[2025-10-13 12:32:38] -rw-r--r-- 2 boinc boinc 221647353 Oct 13 11:34 ATLAS.root_0
[2025-10-13 12:32:38] -rw-r--r-- 2 boinc boinc     15120 Oct 13 11:34 start_atlas.sh
[2025-10-13 12:32:38] -rw-r--r-- 2 boinc boinc    569681 Oct 13 11:34 input.tar.gz
[2025-10-13 12:32:38] -rw------- 1 boinc boinc 199686644 Oct 13 12:31 HITS.pool.root.1
[2025-10-13 12:32:38] -rw------- 1 boinc boinc    890880 Oct 13 12:32 result.tar.gz
12:32:39 (445924): run_atlas exited; CPU time 36187.716302
12:32:39 (445924): called boinc_finish(0)

</stderr_txt>
]]>

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