Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
17:19:07 (3139462): wrapper (7.7.26015): starting
17:19:07 (3139462): wrapper: running run_atlas (--nthreads 3)
[2025-10-13 17:19:07] Arguments: --nthreads 3
[2025-10-13 17:19:07] Threads: 3
[2025-10-13 17:19:07] Checking for CVMFS
[2025-10-13 17:19:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 17:19:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 17:19:08] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 17:19:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 17:19:08] 2.9.2.0 1484052 5838 69196 151666 0 56 29070444 36864000 0 130560 0 4335101 99.990 206409 972 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 17:19:08] CVMFS is ok
[2025-10-13 17:19:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 17:19:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 17:19:08] Further information can be found at the LHC@home message board.
[2025-10-13 17:19:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 17:19:08] Checking for apptainer binary...
[2025-10-13 17:19:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 17:19:08] Running /usr/bin/apptainer --version
[2025-10-13 17:19:08] apptainer version 1.4.1-1.1
[2025-10-13 17:19:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 17:19:08] magicA244b
[2025-10-13 17:19:08] apptainer works
[2025-10-13 17:19:08] Set ATHENA_PROC_NUMBER=3
[2025-10-13 17:19:08] Set ATHENA_CORE_NUMBER=3
[2025-10-13 17:19:08] Starting ATLAS job with PandaID=6841069623
[2025-10-13 17:19:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 18:49:33]  *** The last 200 lines of the pilot log: ***
[2025-10-13 18:49:33] 2025-10-13 16:49:13,424 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 18:49:33] 2025-10-13 16:49:13,424 | INFO     | ***************************************
[2025-10-13 18:49:33] 2025-10-13 16:49:13,424 | INFO     | 
[2025-10-13 18:49:33] 2025-10-13 16:49:13,424 | INFO     | architecture information:
[2025-10-13 18:49:33] 2025-10-13 16:49:13,425 | INFO     | executing command: cat /etc/os-release
[2025-10-13 18:49:33] 2025-10-13 16:49:13,433 | INFO     | cat /etc/os-release:
[2025-10-13 18:49:33] NAME="CentOS Linux"
[2025-10-13 18:49:33] VERSION="7 (Core)"
[2025-10-13 18:49:33] ID="centos"
[2025-10-13 18:49:33] ID_LIKE="rhel fedora"
[2025-10-13 18:49:33] VERSION_ID="7"
[2025-10-13 18:49:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 18:49:33] ANSI_COLOR="0;31"
[2025-10-13 18:49:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 18:49:33] HOME_URL="https://www.centos.org/"
[2025-10-13 18:49:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 18:49:33] 
[2025-10-13 18:49:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 18:49:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 18:49:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 18:49:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 18:49:33] 
[2025-10-13 18:49:33] 2025-10-13 16:49:13,434 | INFO     | ***************************************
[2025-10-13 18:49:33] 2025-10-13 16:49:13,937 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-13 18:49:33] 2025-10-13 16:49:13,951 | INFO     | sufficient remaining disk space (332088213504 B)
[2025-10-13 18:49:33] 2025-10-13 16:49:13,952 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 18:49:33] 2025-10-13 16:49:13,952 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 18:49:33] 2025-10-13 16:49:13,952 | INFO     | update_server=False
[2025-10-13 18:49:33] 2025-10-13 16:49:13,952 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 18:49:33] 2025-10-13 16:49:13,952 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 18:49:33] 2025-10-13 16:49:13,952 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 18:49:33] 2025-10-13 16:49:13,952 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-13 18:49:33] 2025-10-13 16:49:13,952 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 18:49:33] 2025-10-13 16:49:13,952 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 18:49:33] 2025-10-13 16:49:13,952 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 18:49:33] 2025-10-13 16:49:14,089 | INFO     | all data control threads have been joined
[2025-10-13 18:49:33] 2025-10-13 16:49:14,320 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 18:49:33] 2025-10-13 16:49:14,320 | INFO     | aborting loop
[2025-10-13 18:49:33] 2025-10-13 16:49:14,713 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 18:49:33] 2025-10-13 16:49:14,958 | INFO     | [job] retrieve thread has finished
[2025-10-13 18:49:33] 2025-10-13 16:49:14,958 | INFO     | [job] queue monitor thread has finished
[2025-10-13 18:49:33] 2025-10-13 16:49:15,095 | INFO     | [data] control thread has finished
[2025-10-13 18:49:33] 2025-10-13 16:49:15,327 | INFO     | [job] job monitor thread has finished
[2025-10-13 18:49:33] 2025-10-13 16:49:15,394 | INFO     | all payload control threads have been joined
[2025-10-13 18:49:33] 2025-10-13 16:49:15,581 | INFO     | all job control threads have been joined
[2025-10-13 18:49:33] 2025-10-13 16:49:15,622 | INFO     | [payload] validate_post thread has finished
[2025-10-13 18:49:33] 2025-10-13 16:49:16,091 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 18:49:33] 2025-10-13 16:49:16,118 | INFO     | [job] validate thread has finished
[2025-10-13 18:49:33] 2025-10-13 16:49:16,156 | INFO     | [payload] failed_post thread has finished
[2025-10-13 18:49:33] 2025-10-13 16:49:16,163 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 18:49:33] 2025-10-13 16:49:16,332 | INFO     | [data] copytool_in thread has finished
[2025-10-13 18:49:33] 2025-10-13 16:49:16,399 | INFO     | [payload] control thread has finished
[2025-10-13 18:49:33] 2025-10-13 16:49:16,406 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 18:49:33] 2025-10-13 16:49:16,587 | INFO     | [job] control thread has finished
[2025-10-13 18:49:33] 2025-10-13 16:49:16,720 | INFO     | [data] copytool_out thread has finished
[2025-10-13 18:49:33] 2025-10-13 16:49:17,959 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 18:49:33] 2025-10-13 16:49:18,023 [wrapper] supervise_pilot (15 min periods counter: 7)
[2025-10-13 18:49:33] 2025-10-13 16:49:24,401 | INFO     | job.realtimelogging is not enabled
[2025-10-13 18:49:33] 2025-10-13 16:49:25,407 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 18:49:33] 2025-10-13 16:49:27,017 | INFO     | [monitor] cgroup control has ended
[2025-10-13 18:49:33] 2025-10-13 16:49:28,596 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139661448410944)>', '<ExcThread(monitor, started 139660516910848)>']
[2025-10-13 18:49:33] 2025-10-13 16:49:29,030 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 18:49:33] 2025-10-13 16:49:29,030 | INFO     | [monitor] control thread has ended
[2025-10-13 18:49:33] 2025-10-13 16:49:33,622 | INFO     | all workflow threads have been joined
[2025-10-13 18:49:33] 2025-10-13 16:49:33,623 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 18:49:33] 2025-10-13 16:49:33,623 | INFO     | traces error code: 0
[2025-10-13 18:49:33] 2025-10-13 16:49:33,624 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 18:49:33] 2025-10-13 16:49:33,669 [wrapper] ==== pilot stdout END ====
[2025-10-13 18:49:33] 2025-10-13 16:49:33,672 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 18:49:33] 2025-10-13 16:49:33,675 [wrapper] pilotpid: 3143190
[2025-10-13 18:49:33] 2025-10-13 16:49:33,677 [wrapper] Pilot exit status: 0
[2025-10-13 18:49:33] 2025-10-13 16:49:33,685 [wrapper] pandaids: 6841069623
[2025-10-13 18:49:33] 2025-10-13 16:49:33,701 [wrapper] cleanup supervisor_pilot 3164518 3143191
[2025-10-13 18:49:33] 2025-10-13 16:49:33,704 [wrapper] Test setup, not cleaning
[2025-10-13 18:49:33] 2025-10-13 16:49:33,707 [wrapper] apfmon messages muted
[2025-10-13 18:49:33] 2025-10-13 16:49:33,709 [wrapper] ==== wrapper stdout END ====
[2025-10-13 18:49:33] 2025-10-13 16:49:33,712 [wrapper] ==== wrapper stderr END ====
[2025-10-13 18:49:33]  *** Error codes and diagnostics ***
[2025-10-13 18:49:33]     "exeErrorCode": 0,
[2025-10-13 18:49:33]     "exeErrorDiag": "",
[2025-10-13 18:49:33]     "pilotErrorCode": 0,
[2025-10-13 18:49:33]     "pilotErrorDiag": "",
[2025-10-13 18:49:33]  *** Listing of results directory ***
[2025-10-13 18:49:33] total 413112
[2025-10-13 18:49:33] -rw-r--r-- 1 boinc boinc    557409 Oct 13 02:48 pilot3.tar.gz
[2025-10-13 18:49:33] -rw-r--r-- 1 boinc boinc      5112 Oct 13 02:56 queuedata.json
[2025-10-13 18:49:33] -rwx------ 1 boinc boinc     36292 Oct 13 02:56 runpilot2-wrapper.sh
[2025-10-13 18:49:33] -rw-r--r-- 1 boinc boinc       100 Oct 13 17:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 18:49:33] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 17:19 run_atlas
[2025-10-13 18:49:33] -rw-r--r-- 1 boinc boinc       105 Oct 13 17:19 job.xml
[2025-10-13 18:49:33] -rw-r--r-- 2 boinc boinc 221696383 Oct 13 17:19 EVNT.46676267._004713.pool.root.1
[2025-10-13 18:49:33] -rw-r--r-- 2 boinc boinc    569682 Oct 13 17:19 input.tar.gz
[2025-10-13 18:49:33] -rw-r--r-- 2 boinc boinc     15120 Oct 13 17:19 start_atlas.sh
[2025-10-13 18:49:33] drwxrwx--x 2 boinc boinc      4096 Oct 13 17:19 shared
[2025-10-13 18:49:33] -rw-r--r-- 1 boinc boinc         0 Oct 13 17:19 boinc_setup_complete
[2025-10-13 18:49:33] -rw-r--r-- 1 boinc boinc      6200 Oct 13 17:19 init_data.xml
[2025-10-13 18:49:33] -rw-r--r-- 1 boinc boinc         0 Oct 13 17:19 boinc_lockfile
[2025-10-13 18:49:33] -rw-r--r-- 1 boinc boinc      2550 Oct 13 17:19 pandaJob.out
[2025-10-13 18:49:33] -rw------- 1 boinc boinc    972783 Oct 13 17:19 agis_schedconf.cvmfs.json
[2025-10-13 18:49:33] -rw------- 1 boinc boinc   1560580 Oct 13 17:19 agis_ddmendpoints.agis.ALL.json
[2025-10-13 18:49:33] drwx------ 5 boinc boinc      4096 Oct 13 17:19 pilot3
[2025-10-13 18:49:33] -rw------- 1 boinc boinc 195345600 Oct 13 18:48 HITS.46676269._093663.pool.root.1
[2025-10-13 18:49:33] -rw------- 1 boinc boinc        95 Oct 13 18:48 pilot_heartbeat.json
[2025-10-13 18:49:33] -rw-r--r-- 1 boinc boinc       529 Oct 13 18:48 boinc_task_state.xml
[2025-10-13 18:49:33] -rw------- 1 boinc boinc      1016 Oct 13 18:48 memory_monitor_summary.json
[2025-10-13 18:49:33] -rw------- 1 boinc boinc    260515 Oct 13 18:48 log.46676269._093663.job.log.tgz.1
[2025-10-13 18:49:33] -rw------- 1 boinc boinc      7762 Oct 13 18:49 heartbeat.json
[2025-10-13 18:49:33] -rw-r--r-- 1 boinc boinc        27 Oct 13 18:49 wrapper_checkpoint.txt
[2025-10-13 18:49:33] -rw-r--r-- 1 boinc boinc      8192 Oct 13 18:49 boinc_mmap_file
[2025-10-13 18:49:33] -rw------- 1 boinc boinc      4628 Oct 13 18:49 pilotlog.txt
[2025-10-13 18:49:33] -rw------- 1 boinc boinc    787176 Oct 13 18:49 log.46676269._093663.job.log.1
[2025-10-13 18:49:33] -rw------- 1 boinc boinc       357 Oct 13 18:49 output.list
[2025-10-13 18:49:33] -rw-r--r-- 1 boinc boinc       620 Oct 13 18:49 runtime_log
[2025-10-13 18:49:33] -rw------- 1 boinc boinc   1064960 Oct 13 18:49 result.tar.gz
[2025-10-13 18:49:33] -rw-r--r-- 1 boinc boinc      8797 Oct 13 18:49 runtime_log.err
[2025-10-13 18:49:33] -rw------- 1 boinc boinc       662 Oct 13 18:49 rDRLDmm2LS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm9GmNDmcMyNOn.diag
[2025-10-13 18:49:33] -rw-r--r-- 1 boinc boinc      9347 Oct 13 18:49 stderr.txt
[2025-10-13 18:49:33] HITS file was successfully produced:
[2025-10-13 18:49:33] -rw------- 1 boinc boinc 195345600 Oct 13 18:48 shared/HITS.pool.root.1
[2025-10-13 18:49:33]  *** Contents of shared directory: ***
[2025-10-13 18:49:33] total 408896
[2025-10-13 18:49:33] -rw-r--r-- 2 boinc boinc 221696383 Oct 13 17:19 ATLAS.root_0
[2025-10-13 18:49:33] -rw-r--r-- 2 boinc boinc    569682 Oct 13 17:19 input.tar.gz
[2025-10-13 18:49:33] -rw-r--r-- 2 boinc boinc     15120 Oct 13 17:19 start_atlas.sh
[2025-10-13 18:49:33] -rw------- 1 boinc boinc 195345600 Oct 13 18:48 HITS.pool.root.1
[2025-10-13 18:49:33] -rw------- 1 boinc boinc   1064960 Oct 13 18:49 result.tar.gz
18:49:35 (3139462): run_atlas exited; CPU time 15453.440295
18:49:35 (3139462): called boinc_finish(0)

</stderr_txt>
]]>

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