Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:30:45 (2484): wrapper (7.7.26015): starting
16:30:45 (2484): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 16:30:45] Arguments: --nthreads 8
[2025-10-13 16:30:45] Threads: 8
[2025-10-13 16:30:45] Checking for CVMFS
[2025-10-13 16:30:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 16:30:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 16:30:47] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 16:30:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 16:30:48] 2.11.2.0 3881 159348 138124 151664 0 60 16030830 25165825 4632 130560 0 99059287 99.929 28488908 3093 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-13 16:30:48] CVMFS is ok
[2025-10-13 16:30:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 16:30:48] Checking for apptainer binary...
[2025-10-13 16:30:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 16:30:48] Running /usr/bin/apptainer --version
[2025-10-13 16:30:48] apptainer version 1.3.2-1.el7
[2025-10-13 16:30:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 16:30:57] cg-vwn428.simple-grid.lan
[2025-10-13 16:30:57] apptainer works
[2025-10-13 16:30:57] Set ATHENA_PROC_NUMBER=8
[2025-10-13 16:30:57] Set ATHENA_CORE_NUMBER=8
[2025-10-13 16:30:57] Starting ATLAS job with PandaID=6840853835
[2025-10-13 16:30:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 20:44:05]  *** The last 200 lines of the pilot log: ***
[2025-10-13 20:44:05] 2025-10-13 18:43:14,052 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 20:44:05] 2025-10-13 18:43:14,052 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 20:44:05] 2025-10-13 18:43:14,057 | INFO     | fitting pss+swap vs Time
[2025-10-13 20:44:05] 2025-10-13 18:43:14,063 | INFO     | sum of square deviations: 4075741535.0
[2025-10-13 20:44:05] 2025-10-13 18:43:14,065 | INFO     | sum of deviations: 71650965633.99997
[2025-10-13 20:44:05] 2025-10-13 18:43:14,065 | INFO     | mean x: 1760373716.5
[2025-10-13 20:44:05] 2025-10-13 18:43:14,066 | INFO     | mean y: 2444724.7711864407
[2025-10-13 20:44:05] 2025-10-13 18:43:14,066 | INFO     | -- intersect: -30944678781.66046
[2025-10-13 20:44:05] 2025-10-13 18:43:14,066 | INFO     | intersect: -30944678781.66046
[2025-10-13 20:44:05] 2025-10-13 18:43:14,066 | INFO     | chi2: 6.001049591841536
[2025-10-13 20:44:05] 2025-10-13 18:43:14,067 | INFO     | sum of square deviations: 3822136780.0
[2025-10-13 20:44:05] 2025-10-13 18:43:14,068 | INFO     | sum of deviations: 85309310080.0
[2025-10-13 20:44:05] 2025-10-13 18:43:14,069 | INFO     | mean x: 1760373564.0
[2025-10-13 20:44:05] 2025-10-13 18:43:14,069 | INFO     | mean y: 2452777.6233766233
[2025-10-13 20:44:05] 2025-10-13 18:43:14,069 | INFO     | -- intersect: -39288724611.352936
[2025-10-13 20:44:05] 2025-10-13 18:43:14,069 | INFO     | intersect: -39288724611.352936
[2025-10-13 20:44:05] 2025-10-13 18:43:14,069 | INFO     | chi2: 5.282968194732578
[2025-10-13 20:44:05] 2025-10-13 18:43:14,069 | INFO     | current chi2=5.282968194732578 (change=11.965930061387828 %)
[2025-10-13 20:44:05] 2025-10-13 18:43:14,069 | INFO     | right removable region: 230
[2025-10-13 20:44:05] 2025-10-13 18:43:14,070 | INFO     | sum of square deviations: 3822136780.0
[2025-10-13 20:44:05] 2025-10-13 18:43:14,072 | INFO     | sum of deviations: -5793753892.000004
[2025-10-13 20:44:05] 2025-10-13 18:43:14,072 | INFO     | mean x: 1760373869.0
[2025-10-13 20:44:05] 2025-10-13 18:43:14,072 | INFO     | mean y: 2491241.0476190476
[2025-10-13 20:44:05] 2025-10-13 18:43:14,072 | INFO     | -- intersect: 2670939164.801372
[2025-10-13 20:44:05] 2025-10-13 18:43:14,072 | INFO     | intersect: 2670939164.801372
[2025-10-13 20:44:05] 2025-10-13 18:43:14,073 | INFO     | chi2: 1.7359527346936756
[2025-10-13 20:44:05] 2025-10-13 18:43:14,073 | INFO     | current chi2=1.7359527346936756 (change=71.0725147638554 %)
[2025-10-13 20:44:05] 2025-10-13 18:43:14,073 | INFO     | sum of square deviations: 3579276412.5
[2025-10-13 20:44:05] 2025-10-13 18:43:14,075 | INFO     | sum of deviations: -34409537549.50001
[2025-10-13 20:44:05] 2025-10-13 18:43:14,075 | INFO     | mean x: 1760374021.5
[2025-10-13 20:44:05] 2025-10-13 18:43:14,075 | INFO     | mean y: 2509070.0840707966
[2025-10-13 20:44:05] 2025-10-13 18:43:14,075 | INFO     | -- intersect: 16925945265.854153
[2025-10-13 20:44:05] 2025-10-13 18:43:14,075 | INFO     | intersect: 16925945265.854153
[2025-10-13 20:44:05] 2025-10-13 18:43:14,076 | INFO     | chi2: 0.9241701874335321
[2025-10-13 20:44:05] 2025-10-13 18:43:14,076 | INFO     | current chi2=0.9241701874335321 (change=46.76294066286257 %)
[2025-10-13 20:44:05] 2025-10-13 18:43:14,076 | INFO     | sum of square deviations: 3346927870.0
[2025-10-13 20:44:05] 2025-10-13 18:43:14,078 | INFO     | sum of deviations: -37538187320.0
[2025-10-13 20:44:05] 2025-10-13 18:43:14,078 | INFO     | mean x: 1760374174.0
[2025-10-13 20:44:05] 2025-10-13 18:43:14,078 | INFO     | mean y: 2511123.1583710406
[2025-10-13 20:44:05] 2025-10-13 18:43:14,078 | INFO     | -- intersect: 19746365207.7408
[2025-10-13 20:44:05] 2025-10-13 18:43:14,078 | INFO     | intersect: 19746365207.7408
[2025-10-13 20:44:05] 2025-10-13 18:43:14,079 | INFO     | chi2: 0.9078350579069384
[2025-10-13 20:44:05] 2025-10-13 18:43:14,079 | INFO     | current chi2=0.9078350579069384 (change=1.7675456045554934 %)
[2025-10-13 20:44:05] 2025-10-13 18:43:14,079 | INFO     | left removable region: 30
[2025-10-13 20:44:05] 2025-10-13 18:43:14,079 | INFO     | sum of square deviations: 2480604650.0
[2025-10-13 20:44:05] 2025-10-13 18:43:14,087 | INFO     | sum of deviations: -529160970.0
[2025-10-13 20:44:05] 2025-10-13 18:43:14,087 | INFO     | mean x: 1760374448.5
[2025-10-13 20:44:05] 2025-10-13 18:43:14,087 | INFO     | mean y: 2504555.69
[2025-10-13 20:44:05] 2025-10-13 18:43:14,088 | INFO     | -- intersect: 378026487.70422685
[2025-10-13 20:44:05] 2025-10-13 18:43:14,088 | INFO     | intersect: 378026487.70422685
[2025-10-13 20:44:05] 2025-10-13 18:43:14,088 | INFO     | chi2: 0.02531020322716366
[2025-10-13 20:44:05] 2025-10-13 18:43:14,088 | INFO     | -- intersect: 378026487.70422685
[2025-10-13 20:44:05] 2025-10-13 18:43:14,088 | INFO     | current memory leak: -0.21 B/s (using 200 data points, chi2=0.03)
[2025-10-13 20:44:05] 2025-10-13 18:43:14,089 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2025-10-13 20:44:05] 2025-10-13 18:43:14,089 | INFO     | ..............................
[2025-10-13 20:44:05] 2025-10-13 18:43:14,089 | INFO     | . Timing measurements:
[2025-10-13 20:44:05] 2025-10-13 18:43:14,089 | INFO     | . get job = 0 s
[2025-10-13 20:44:05] 2025-10-13 18:43:14,089 | INFO     | . initial setup = 7 s
[2025-10-13 20:44:05] 2025-10-13 18:43:14,090 | INFO     | . payload setup = 131 s
[2025-10-13 20:44:05] 2025-10-13 18:43:14,090 | INFO     | . stage-in = 0 s
[2025-10-13 20:44:05] 2025-10-13 18:43:14,090 | INFO     | . payload execution = 14506 s
[2025-10-13 20:44:05] 2025-10-13 18:43:14,090 | INFO     | . stage-out = 3 s
[2025-10-13 20:44:05] 2025-10-13 18:43:14,090 | INFO     | . log creation = 1 s
[2025-10-13 20:44:05] 2025-10-13 18:43:14,090 | INFO     | ..............................
[2025-10-13 20:44:05] 2025-10-13 18:43:14,235 | INFO     | 
[2025-10-13 20:44:05] 2025-10-13 18:43:14,235 | INFO     | job summary report
[2025-10-13 20:44:05] 2025-10-13 18:43:14,235 | INFO     | --------------------------------------------------
[2025-10-13 20:44:05] 2025-10-13 18:43:14,235 | INFO     | PanDA job id: 6840853835
[2025-10-13 20:44:05] 2025-10-13 18:43:14,235 | INFO     | task id: 46676269
[2025-10-13 20:44:05] 2025-10-13 18:43:14,236 | INFO     | errors: (none)
[2025-10-13 20:44:05] 2025-10-13 18:43:14,236 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 20:44:05] 2025-10-13 18:43:14,236 | INFO     | pilot state: finished 
[2025-10-13 20:44:05] 2025-10-13 18:43:14,236 | INFO     | transexitcode: 0
[2025-10-13 20:44:05] 2025-10-13 18:43:14,236 | INFO     | exeerrorcode: 0
[2025-10-13 20:44:05] 2025-10-13 18:43:14,236 | INFO     | exeerrordiag: 
[2025-10-13 20:44:05] 2025-10-13 18:43:14,236 | INFO     | exitcode: 0
[2025-10-13 20:44:05] 2025-10-13 18:43:14,236 | INFO     | exitmsg: OK
[2025-10-13 20:44:05] 2025-10-13 18:43:14,236 | INFO     | cpuconsumptiontime: 52380 s
[2025-10-13 20:44:05] 2025-10-13 18:43:14,236 | INFO     | nevents: 400
[2025-10-13 20:44:05] 2025-10-13 18:43:14,237 | INFO     | neventsw: 0
[2025-10-13 20:44:05] 2025-10-13 18:43:14,237 | INFO     | pid: 12813
[2025-10-13 20:44:05] 2025-10-13 18:43:14,237 | INFO     | pgrp: 12813
[2025-10-13 20:44:05] 2025-10-13 18:43:14,237 | INFO     | corecount: 8
[2025-10-13 20:44:05] 2025-10-13 18:43:14,237 | INFO     | event service: False
[2025-10-13 20:44:05] 2025-10-13 18:43:14,237 | INFO     | sizes: {0: 2348686, 1: 2348885, 12: 2348885, 22: 2348913, 33: 2348941, 44: 2348997, 54: 2349153, 65: 2349181, 76: 2349209, 87: 2349265, 91: 2349555, 97: 2349863, 1
[2025-10-13 20:44:05] 2025-10-13 18:43:14,237 | INFO     | --------------------------------------------------
[2025-10-13 20:44:05] 2025-10-13 18:43:14,237 | INFO     | 
[2025-10-13 20:44:05] 2025-10-13 18:43:14,237 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2025-10-13 20:44:05] 2025-10-13 18:43:14,760 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 20:44:05] 2025-10-13 18:43:14,760 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 20:44:05] 2025-10-13 18:43:14,760 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 20:44:05] 2025-10-13 18:43:14,760 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 20:44:05] 2025-10-13 18:43:14,760 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 20:44:05] 2025-10-13 18:43:14,761 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 20:44:05] 2025-10-13 18:43:14,761 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 20:44:05] 2025-10-13 18:43:14,761 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 20:44:05] 2025-10-13 18:43:14,761 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 20:44:05] 2025-10-13 18:43:14,761 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 20:44:05] 2025-10-13 18:43:14,761 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 20:44:05] 2025-10-13 18:43:14,761 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 20:44:05] 2025-10-13 18:43:14,761 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 20:44:05] 2025-10-13 18:43:14,761 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 20:44:05] 2025-10-13 18:43:14,761 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 20:44:05] 2025-10-13 18:43:14,762 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 20:44:05] 2025-10-13 18:43:14,762 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 20:44:05] 2025-10-13 18:43:14,762 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 20:44:05] 2025-10-13 18:43:14,762 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 20:44:05] 2025-10-13 18:43:14,762 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 20:44:05] 2025-10-13 18:43:14,762 | INFO     | job 6840853835 has completed (purged errors)
[2025-10-13 20:44:05] 2025-10-13 18:43:14,762 | INFO     | overall cleanup function is called
[2025-10-13 20:44:05] 2025-10-13 18:43:15,772 | INFO     | --- collectZombieJob: --- 10, [12813]
[2025-10-13 20:44:05] 2025-10-13 18:43:15,772 | INFO     | zombie collector waiting for pid 12813
[2025-10-13 20:44:05] 2025-10-13 18:43:15,772 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 20:44:05] 2025-10-13 18:43:15,772 | INFO     | collected zombie processes
[2025-10-13 20:44:05] 2025-10-13 18:43:15,772 | INFO     | will attempt to kill all subprocesses of pid=12813
[2025-10-13 20:44:05] 2025-10-13 18:43:15,884 | INFO     | process IDs to be killed: [12813] (in reverse order)
[2025-10-13 20:44:05] 2025-10-13 18:43:16,825 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 20:44:05] 2025-10-13 18:43:16,826 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 20:44:05] 2025-10-13 18:43:16,829 | INFO     | did not find any defunct processes belonging to 12813
[2025-10-13 20:44:05] 2025-10-13 18:43:16,832 | INFO     | did not find any defunct processes belonging to 12813
[2025-10-13 20:44:05] 2025-10-13 18:43:16,832 | INFO     | ready for new job
[2025-10-13 20:44:05] 2025-10-13 18:43:16,833 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 20:44:05] 2025-10-13 18:43:16,835 | INFO     | ***************************************
[2025-10-13 20:44:05] 2025-10-13 18:43:16,835 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 20:44:05] 2025-10-13 18:43:16,835 | INFO     | ***************************************
[2025-10-13 20:44:05] 2025-10-13 18:43:16,835 | INFO     | 
[2025-10-13 20:44:05] 2025-10-13 18:43:16,836 | INFO     | pilot is running in a VM
[2025-10-13 20:44:05] 2025-10-13 18:43:16,836 | INFO     | architecture information:
[2025-10-13 20:44:05] 2025-10-13 18:43:16,849 | INFO     | executing command: cat /etc/os-release
[2025-10-13 20:44:05] 2025-10-13 18:43:17,113 | INFO     | cat /etc/os-release:
[2025-10-13 20:44:05] NAME="CentOS Linux"
[2025-10-13 20:44:05] VERSION="7 (Core)"
[2025-10-13 20:44:05] ID="centos"
[2025-10-13 20:44:05] ID_LIKE="rhel fedora"
[2025-10-13 20:44:05] VERSION_ID="7"
[2025-10-13 20:44:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 20:44:05] ANSI_COLOR="0;31"
[2025-10-13 20:44:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 20:44:05] HOME_URL="https://www.centos.org/"
[2025-10-13 20:44:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 20:44:05] 
[2025-10-13 20:44:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 20:44:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 20:44:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 20:44:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 20:44:05] 
[2025-10-13 20:44:05] 2025-10-13 18:43:17,114 | INFO     | ***************************************
[2025-10-13 20:44:05] 2025-10-13 18:43:17,617 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2025-10-13 20:44:05] 2025-10-13 18:43:17,793 | INFO     | sufficient remaining disk space (496172531712 B)
[2025-10-13 20:44:05] 2025-10-13 18:43:17,794 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 20:44:05] 2025-10-13 18:43:17,794 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 20:44:05] 2025-10-13 18:43:17,794 | INFO     | update_server=False
[2025-10-13 20:44:05] 2025-10-13 18:43:17,794 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 20:44:05] 2025-10-13 18:43:17,795 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 20:44:05] 2025-10-13 18:43:17,795 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 20:44:05] 2025-10-13 18:43:17,795 | INFO     | aborting loop
[2025-10-13 20:44:05] 2025-10-13 18:43:18,388 | INFO     | all data control threads have been joined
[2025-10-13 20:44:05] 2025-10-13 18:43:18,409 | INFO     | all payload control threads have been joined
[2025-10-13 20:44:05] 2025-10-13 18:43:18,665 | INFO     | all job control threads have been joined
[2025-10-13 20:44:05] 2025-10-13 18:43:18,800 | INFO     | [job] retrieve thread has finished
[2025-10-13 20:44:05] 2025-10-13 18:43:18,801 | INFO     | [job] job monitor thread has finished
[2025-10-13 20:44:05] 2025-10-13 18:43:18,875 | INFO     | [job] validate thread has finished
[2025-10-13 20:44:05] 2025-10-13 18:43:18,941 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 20:44:05] 2025-10-13 18:43:19,019 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 20:44:05] 2025-10-13 18:43:19,117 | INFO     | [payload] validate_post thread has finished
[2025-10-13 20:44:05] 2025-10-13 18:43:19,250 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 20:44:05] 2025-10-13 18:43:19,348 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 20:44:05] 2025-10-13 18:43:19,394 | INFO     | [data] control thread has finished
[2025-10-13 20:44:05] 2025-10-13 18:43:19,415 | INFO     | [payload] control thread has finished
[2025-10-13 20:44:05] 2025-10-13 18:43:19,470 | INFO     | [data] copytool_in thread has finished
[2025-10-13 20:44:05] 2025-10-13 18:43:19,673 | INFO     | [job] control thread has finished
[2025-10-13 20:44:05] 2025-10-13 18:43:19,802 | INFO     | [data] copytool_out thread has finished
[2025-10-13 20:44:05] 2025-10-13 18:43:20,000 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 20:44:05] 2025-10-13 18:43:20,076 | INFO     | [payload] failed_post thread has finished
[2025-10-13 20:44:05] 2025-10-13 18:43:20,256 | INFO     | [job] queue monitor thread has finished
[2025-10-13 20:44:05] 2025-10-13 18:43:20,325 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 20:44:05] 2025-10-13 18:43:24,337 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 20:44:05] 2025-10-13 18:43:46,427 | INFO     | PID=6289 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-13 20:44:05] 2025-10-13 18:43:46,427 | INFO     | .. there are 9 such processes running
[2025-10-13 20:44:05] 2025-10-13 18:43:46,427 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 20:44:05] 2025-10-13 18:43:46,428 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 20:44:05] 2025-10-13 18:43:46,428 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 20:44:05] 2025-10-13 18:43:56,124 | INFO     | [monitor] cgroup control has ended
[2025-10-13 20:44:05] 2025-10-13 18:43:56,425 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140222566500160)>', '<ExcThread(monitor, started 140222134208256)>']
[2025-10-13 20:44:05] 2025-10-13 18:43:56,488 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 20:44:05] 2025-10-13 18:43:56,488 | INFO     | [monitor] control thread has ended
[2025-10-13 20:44:05] 2025-10-13 18:44:01,451 | INFO     | all workflow threads have been joined
[2025-10-13 20:44:05] 2025-10-13 18:44:01,451 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 20:44:05] 2025-10-13 18:44:01,451 | INFO     | traces error code: 0
[2025-10-13 20:44:05] 2025-10-13 18:44:01,452 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 20:44:05] 2025-10-13 18:44:01,903 [wrapper] ==== pilot stdout END ====
[2025-10-13 20:44:05] 2025-10-13 18:44:01,968 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 20:44:05] 2025-10-13 18:44:02,077 [wrapper] pilotpid: 6289
[2025-10-13 20:44:05] 2025-10-13 18:44:02,171 [wrapper] Pilot exit status: 0
[2025-10-13 20:44:05] 2025-10-13 18:44:02,430 [wrapper] pandaids: 6840853835
[2025-10-13 20:44:05] 2025-10-13 18:44:03,319 [wrapper] cleanup supervisor_pilot  5168 6290
[2025-10-13 20:44:05] 2025-10-13 18:44:03,451 [wrapper] Test setup, not cleaning
[2025-10-13 20:44:05] 2025-10-13 18:44:03,558 [wrapper] apfmon messages muted
[2025-10-13 20:44:05] 2025-10-13 18:44:03,665 [wrapper] ==== wrapper stdout END ====
[2025-10-13 20:44:05] 2025-10-13 18:44:03,739 [wrapper] ==== wrapper stderr END ====
[2025-10-13 20:44:05]  *** Error codes and diagnostics ***
[2025-10-13 20:44:05]     "exeErrorCode": 0,
[2025-10-13 20:44:05]     "exeErrorDiag": "",
[2025-10-13 20:44:05]     "pilotErrorCode": 0,
[2025-10-13 20:44:05]     "pilotErrorDiag": "",
[2025-10-13 20:44:05]  *** Listing of results directory ***
[2025-10-13 20:44:05] total 408496
[2025-10-13 20:44:05] -rw-r--r--. 1 boinc boinc    557409 Oct 12 23:57 pilot3.tar.gz
[2025-10-13 20:44:05] -rw-r--r--. 1 boinc boinc      5112 Oct 13 00:47 queuedata.json
[2025-10-13 20:44:05] -rwx------. 1 boinc boinc     36292 Oct 13 00:47 runpilot2-wrapper.sh
[2025-10-13 20:44:05] -rw-r--r--. 1 boinc boinc       100 Oct 13 16:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 20:44:05] -rwxr-xr-x. 1 boinc boinc      7986 Oct 13 16:30 run_atlas
[2025-10-13 20:44:05] -rw-r--r--. 1 boinc boinc       105 Oct 13 16:30 job.xml
[2025-10-13 20:44:05] -rw-r--r--. 1 boinc boinc      6390 Oct 13 16:30 init_data.xml
[2025-10-13 20:44:05] -rw-r--r--. 2 boinc boinc 220910684 Oct 13 16:30 EVNT.46676267._004630.pool.root.1
[2025-10-13 20:44:05] -rw-r--r--. 2 boinc boinc     15120 Oct 13 16:30 start_atlas.sh
[2025-10-13 20:44:05] drwxrwx--x. 2 boinc boinc        68 Oct 13 16:30 shared
[2025-10-13 20:44:05] -rw-r--r--. 2 boinc boinc    569679 Oct 13 16:30 input.tar.gz
[2025-10-13 20:44:05] -rw-r--r--. 1 boinc boinc         0 Oct 13 16:30 boinc_lockfile
[2025-10-13 20:44:05] -rw-r--r--. 1 boinc boinc      2550 Oct 13 16:30 pandaJob.out
[2025-10-13 20:44:05] -rw-------. 1 boinc boinc    972791 Oct 13 16:34 agis_schedconf.cvmfs.json
[2025-10-13 20:44:05] drwx------. 5 boinc boinc      4096 Oct 13 16:34 pilot3
[2025-10-13 20:44:05] -rw-------. 1 boinc boinc 188603829 Oct 13 20:40 HITS.46676269._091458.pool.root.1
[2025-10-13 20:44:05] -rw-r--r--. 1 boinc boinc       531 Oct 13 20:40 boinc_task_state.xml
[2025-10-13 20:44:05] -rw-------. 1 boinc boinc      1018 Oct 13 20:41 memory_monitor_summary.json
[2025-10-13 20:44:05] -rw-------. 1 boinc boinc   1560580 Oct 13 20:41 agis_ddmendpoints.agis.ALL.json
[2025-10-13 20:44:05] -rw-------. 1 boinc boinc    452387 Oct 13 20:41 log.46676269._091458.job.log.tgz.1
[2025-10-13 20:44:05] -rw-------. 1 boinc boinc        95 Oct 13 20:43 pilot_heartbeat.json
[2025-10-13 20:44:05] -rw-------. 1 boinc boinc      7779 Oct 13 20:43 heartbeat.json
[2025-10-13 20:44:05] -rw-r--r--. 1 boinc boinc        28 Oct 13 20:43 wrapper_checkpoint.txt
[2025-10-13 20:44:05] -rw-r--r--. 1 boinc boinc      8192 Oct 13 20:43 boinc_mmap_file
[2025-10-13 20:44:05] -rw-------. 1 boinc boinc      4883 Oct 13 20:44 pilotlog.txt
[2025-10-13 20:44:05] -rw-------. 1 boinc boinc   1995407 Oct 13 20:44 log.46676269._091458.job.log.1
[2025-10-13 20:44:05] -rw-------. 1 boinc boinc       357 Oct 13 20:44 output.list
[2025-10-13 20:44:05] -rw-r--r--. 1 boinc boinc       620 Oct 13 20:44 runtime_log
[2025-10-13 20:44:05] -rw-------. 1 boinc boinc   2467840 Oct 13 20:44 result.tar.gz
[2025-10-13 20:44:05] -rw-r--r--. 1 boinc boinc      8703 Oct 13 20:44 runtime_log.err
[2025-10-13 20:44:05] -rw-------. 1 boinc boinc       656 Oct 13 20:44 GohLDmw1JS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmRvlNDmfhYQNm.diag
[2025-10-13 20:44:05] -rw-r--r--. 1 boinc boinc     20592 Oct 13 20:44 stderr.txt
[2025-10-13 20:44:05] HITS file was successfully produced:
[2025-10-13 20:44:05] -rw-------. 1 boinc boinc 188603829 Oct 13 20:40 shared/HITS.pool.root.1
[2025-10-13 20:44:05]  *** Contents of shared directory: ***
[2025-10-13 20:44:05] total 402908
[2025-10-13 20:44:05] -rw-r--r--. 2 boinc boinc 220910684 Oct 13 16:30 ATLAS.root_0
[2025-10-13 20:44:05] -rw-r--r--. 2 boinc boinc     15120 Oct 13 16:30 start_atlas.sh
[2025-10-13 20:44:05] -rw-r--r--. 2 boinc boinc    569679 Oct 13 16:30 input.tar.gz
[2025-10-13 20:44:05] -rw-------. 1 boinc boinc 188603829 Oct 13 20:40 HITS.pool.root.1
[2025-10-13 20:44:05] -rw-------. 1 boinc boinc   2467840 Oct 13 20:44 result.tar.gz
20:44:07 (2484): run_atlas exited; CPU time 52588.849902
20:44:07 (2484): called boinc_finish(0)

</stderr_txt>
]]>

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