Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
01:39:10 (29580): wrapper (7.7.26015): starting
01:39:10 (29580): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 01:39:10] Arguments: --nthreads 8
[2025-10-13 01:39:10] Threads: 8
[2025-10-13 01:39:10] Checking for CVMFS
[2025-10-13 01:39:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 01:39:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 01:39:10] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 01:39:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 01:39:10] 2.11.2.0 3101 199669 79100 151650 1 57 13227672 20275201 1 130560 1 69523151 99.977 9068647 26103 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 01:39:10] CVMFS is ok
[2025-10-13 01:39:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 01:39:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 01:39:10] Further information can be found at the LHC@home message board.
[2025-10-13 01:39:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 01:39:10] Checking for apptainer binary...
[2025-10-13 01:39:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 01:39:10] Running /usr/bin/apptainer --version
[2025-10-13 01:39:10] apptainer version 1.3.2-1.el7
[2025-10-13 01:39:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 01:39:12] c-204-29.aglt2.org
[2025-10-13 01:39:12] apptainer works
[2025-10-13 01:39:12] Set ATHENA_PROC_NUMBER=8
[2025-10-13 01:39:12] Set ATHENA_CORE_NUMBER=8
[2025-10-13 01:39:12] Starting ATLAS job with PandaID=6841069721
[2025-10-13 01:39:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 03:44:47]  *** The last 200 lines of the pilot log: ***
[2025-10-13 03:44:48] 2025-10-13 07:43:47,756 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 03:44:48] 2025-10-13 07:43:47,756 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 03:44:48] 2025-10-13 07:43:47,756 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 03:44:48] 2025-10-13 07:43:47,757 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 03:44:48] 2025-10-13 07:43:47,759 | INFO     | fitting pss+swap vs Time
[2025-10-13 03:44:48] 2025-10-13 07:43:47,759 | INFO     | sum of square deviations: 563026370.5
[2025-10-13 03:44:48] 2025-10-13 07:43:47,760 | INFO     | sum of deviations: -6311486146.000022
[2025-10-13 03:44:48] 2025-10-13 07:43:47,760 | INFO     | mean x: 1760337691.5
[2025-10-13 03:44:48] 2025-10-13 07:43:47,760 | INFO     | mean y: 2573041.6721311477
[2025-10-13 03:44:48] 2025-10-13 07:43:47,760 | INFO     | -- intersect: 19735835166.352505
[2025-10-13 03:44:48] 2025-10-13 07:43:47,760 | INFO     | intersect: 19735835166.352505
[2025-10-13 03:44:48] 2025-10-13 07:43:47,761 | INFO     | chi2: 1.621067560713213
[2025-10-13 03:44:48] 2025-10-13 07:43:47,761 | INFO     | sum of square deviations: 496597218.0
[2025-10-13 03:44:48] 2025-10-13 07:43:47,761 | INFO     | sum of deviations: -5054772808.000002
[2025-10-13 03:44:48] 2025-10-13 07:43:47,762 | INFO     | mean x: 1760337539.0
[2025-10-13 03:44:48] 2025-10-13 07:43:47,762 | INFO     | mean y: 2575931.7264957265
[2025-10-13 03:44:48] 2025-10-13 07:43:47,762 | INFO     | -- intersect: 17920731737.905098
[2025-10-13 03:44:48] 2025-10-13 07:43:47,762 | INFO     | intersect: 17920731737.905098
[2025-10-13 03:44:48] 2025-10-13 07:43:47,762 | INFO     | chi2: 1.6229632821557096
[2025-10-13 03:44:48] 2025-10-13 07:43:47,762 | INFO     | current chi2=1.6229632821557096 (change=-0.11694277823081974 %)
[2025-10-13 03:44:48] 2025-10-13 07:43:47,762 | INFO     | right removable region: 116
[2025-10-13 03:44:48] 2025-10-13 07:43:47,763 | INFO     | sum of square deviations: 496597218.0
[2025-10-13 03:44:48] 2025-10-13 07:43:47,763 | INFO     | sum of deviations: -24883828881.000004
[2025-10-13 03:44:48] 2025-10-13 07:43:47,763 | INFO     | mean x: 1760337844.0
[2025-10-13 03:44:48] 2025-10-13 07:43:47,763 | INFO     | mean y: 2614898.418803419
[2025-10-13 03:44:48] 2025-10-13 07:43:47,764 | INFO     | -- intersect: 88210812800.25337
[2025-10-13 03:44:48] 2025-10-13 07:43:47,764 | INFO     | intersect: 88210812800.25337
[2025-10-13 03:44:48] 2025-10-13 07:43:47,764 | INFO     | chi2: 0.1394834116210863
[2025-10-13 03:44:48] 2025-10-13 07:43:47,764 | INFO     | current chi2=0.1394834116210863 (change=91.39558307121274 %)
[2025-10-13 03:44:48] 2025-10-13 07:43:47,764 | INFO     | sum of square deviations: 435610028.0
[2025-10-13 03:44:48] 2025-10-13 07:43:47,765 | INFO     | sum of deviations: -25302944173.499992
[2025-10-13 03:44:48] 2025-10-13 07:43:47,765 | INFO     | mean x: 1760337996.5
[2025-10-13 03:44:48] 2025-10-13 07:43:47,765 | INFO     | mean y: 2615807.3660714286
[2025-10-13 03:44:48] 2025-10-13 07:43:47,765 | INFO     | -- intersect: 102254013132.70572
[2025-10-13 03:44:48] 2025-10-13 07:43:47,765 | INFO     | intersect: 102254013132.70572
[2025-10-13 03:44:48] 2025-10-13 07:43:47,766 | INFO     | chi2: 0.0968821523514486
[2025-10-13 03:44:48] 2025-10-13 07:43:47,766 | INFO     | current chi2=0.0968821523514486 (change=30.542168975165414 %)
[2025-10-13 03:44:48] 2025-10-13 07:43:47,766 | INFO     | sum of square deviations: 379832238.0
[2025-10-13 03:44:48] 2025-10-13 07:43:47,766 | INFO     | sum of deviations: -23074908102.00002
[2025-10-13 03:44:48] 2025-10-13 07:43:47,767 | INFO     | mean x: 1760338149.0
[2025-10-13 03:44:48] 2025-10-13 07:43:47,767 | INFO     | mean y: 2609703.355140187
[2025-10-13 03:44:48] 2025-10-13 07:43:47,767 | INFO     | -- intersect: 106943614054.38606
[2025-10-13 03:44:48] 2025-10-13 07:43:47,767 | INFO     | intersect: 106943614054.38606
[2025-10-13 03:44:48] 2025-10-13 07:43:47,767 | INFO     | chi2: 0.09428702970081393
[2025-10-13 03:44:48] 2025-10-13 07:43:47,767 | INFO     | current chi2=0.09428702970081393 (change=2.678638518703258 %)
[2025-10-13 03:44:48] 2025-10-13 07:43:47,767 | INFO     | left removable region: 30
[2025-10-13 03:44:48] 2025-10-13 07:43:47,768 | INFO     | sum of square deviations: 197203697.5
[2025-10-13 03:44:48] 2025-10-13 07:43:47,768 | INFO     | sum of deviations: -13681760119.5
[2025-10-13 03:44:48] 2025-10-13 07:43:47,768 | INFO     | mean x: 1760338423.5
[2025-10-13 03:44:48] 2025-10-13 07:43:47,768 | INFO     | mean y: 2588064.6395348837
[2025-10-13 03:44:48] 2025-10-13 07:43:47,768 | INFO     | -- intersect: 122132793252.4292
[2025-10-13 03:44:48] 2025-10-13 07:43:47,769 | INFO     | intersect: 122132793252.4292
[2025-10-13 03:44:48] 2025-10-13 07:43:47,769 | INFO     | chi2: 0.08463452420551122
[2025-10-13 03:44:48] 2025-10-13 07:43:47,769 | INFO     | -- intersect: 122132793252.4292
[2025-10-13 03:44:48] 2025-10-13 07:43:47,769 | INFO     | current memory leak: -69.38 B/s (using 86 data points, chi2=0.08)
[2025-10-13 03:44:48] 2025-10-13 07:43:47,770 | INFO     | could have reported an average CPU frequency of 1951 MHz (8 samples)
[2025-10-13 03:44:48] 2025-10-13 07:43:47,770 | INFO     | ..............................
[2025-10-13 03:44:48] 2025-10-13 07:43:47,770 | INFO     | . Timing measurements:
[2025-10-13 03:44:48] 2025-10-13 07:43:47,770 | INFO     | . get job = 0 s
[2025-10-13 03:44:48] 2025-10-13 07:43:47,770 | INFO     | . initial setup = 2 s
[2025-10-13 03:44:48] 2025-10-13 07:43:47,770 | INFO     | . payload setup = 8 s
[2025-10-13 03:44:48] 2025-10-13 07:43:47,770 | INFO     | . stage-in = 0 s
[2025-10-13 03:44:48] 2025-10-13 07:43:47,771 | INFO     | . payload execution = 7416 s
[2025-10-13 03:44:48] 2025-10-13 07:43:47,771 | INFO     | . stage-out = 0 s
[2025-10-13 03:44:48] 2025-10-13 07:43:47,771 | INFO     | . log creation = 0 s
[2025-10-13 03:44:48] 2025-10-13 07:43:47,771 | INFO     | ..............................
[2025-10-13 03:44:48] 2025-10-13 07:43:47,864 | INFO     | 
[2025-10-13 03:44:48] 2025-10-13 07:43:47,864 | INFO     | job summary report
[2025-10-13 03:44:48] 2025-10-13 07:43:47,864 | INFO     | --------------------------------------------------
[2025-10-13 03:44:48] 2025-10-13 07:43:47,864 | INFO     | PanDA job id: 6841069721
[2025-10-13 03:44:48] 2025-10-13 07:43:47,865 | INFO     | task id: 46676269
[2025-10-13 03:44:48] 2025-10-13 07:43:47,865 | INFO     | errors: (none)
[2025-10-13 03:44:48] 2025-10-13 07:43:47,865 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 03:44:48] 2025-10-13 07:43:47,865 | INFO     | pilot state: finished 
[2025-10-13 03:44:48] 2025-10-13 07:43:47,865 | INFO     | transexitcode: 0
[2025-10-13 03:44:48] 2025-10-13 07:43:47,865 | INFO     | exeerrorcode: 0
[2025-10-13 03:44:48] 2025-10-13 07:43:47,865 | INFO     | exeerrordiag: 
[2025-10-13 03:44:48] 2025-10-13 07:43:47,865 | INFO     | exitcode: 0
[2025-10-13 03:44:48] 2025-10-13 07:43:47,865 | INFO     | exitmsg: OK
[2025-10-13 03:44:48] 2025-10-13 07:43:47,866 | INFO     | cpuconsumptiontime: 54408 s
[2025-10-13 03:44:48] 2025-10-13 07:43:47,866 | INFO     | nevents: 400
[2025-10-13 03:44:48] 2025-10-13 07:43:47,866 | INFO     | neventsw: 0
[2025-10-13 03:44:48] 2025-10-13 07:43:47,866 | INFO     | pid: 7326
[2025-10-13 03:44:48] 2025-10-13 07:43:47,866 | INFO     | pgrp: 7326
[2025-10-13 03:44:48] 2025-10-13 07:43:47,866 | INFO     | corecount: 8
[2025-10-13 03:44:48] 2025-10-13 07:43:47,866 | INFO     | event service: False
[2025-10-13 03:44:48] 2025-10-13 07:43:47,866 | INFO     | sizes: {0: 2348856, 6: 2349118, 11: 2349146, 7428: 2376536, 7429: 2376535, 7430: 2385589, 7431: 2385773, 7440: 2385967}
[2025-10-13 03:44:48] 2025-10-13 07:43:47,866 | INFO     | --------------------------------------------------
[2025-10-13 03:44:48] 2025-10-13 07:43:47,867 | INFO     | 
[2025-10-13 03:44:48] 2025-10-13 07:43:47,867 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 03:44:48] 2025-10-13 07:43:47,896 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 03:44:48] 2025-10-13 07:43:47,896 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 03:44:48] 2025-10-13 07:43:47,896 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 03:44:48] 2025-10-13 07:43:47,896 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 03:44:48] 2025-10-13 07:43:47,897 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 03:44:48] 2025-10-13 07:43:47,897 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 03:44:48] 2025-10-13 07:43:47,897 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 03:44:48] 2025-10-13 07:43:47,897 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 03:44:48] 2025-10-13 07:43:47,897 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 03:44:48] 2025-10-13 07:43:47,897 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 03:44:48] 2025-10-13 07:43:47,898 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 03:44:48] 2025-10-13 07:43:47,898 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 03:44:48] 2025-10-13 07:43:47,898 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 03:44:48] 2025-10-13 07:43:47,898 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 03:44:48] 2025-10-13 07:43:47,898 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 03:44:48] 2025-10-13 07:43:47,898 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 03:44:48] 2025-10-13 07:43:47,899 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 03:44:48] 2025-10-13 07:43:47,899 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 03:44:48] 2025-10-13 07:43:47,899 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 03:44:48] 2025-10-13 07:43:47,899 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 03:44:48] 2025-10-13 07:43:47,899 | INFO     | job 6841069721 has completed (purged errors)
[2025-10-13 03:44:48] 2025-10-13 07:43:47,900 | INFO     | overall cleanup function is called
[2025-10-13 03:44:48] 2025-10-13 07:43:48,908 | INFO     | --- collectZombieJob: --- 10, [7326]
[2025-10-13 03:44:48] 2025-10-13 07:43:48,908 | INFO     | zombie collector waiting for pid 7326
[2025-10-13 03:44:48] 2025-10-13 07:43:48,908 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 03:44:48] 2025-10-13 07:43:48,909 | INFO     | collected zombie processes
[2025-10-13 03:44:48] 2025-10-13 07:43:48,909 | INFO     | will attempt to kill all subprocesses of pid=7326
[2025-10-13 03:44:48] 2025-10-13 07:43:48,998 | INFO     | process IDs to be killed: [7326] (in reverse order)
[2025-10-13 03:44:48] 2025-10-13 07:43:49,054 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 03:44:48] 2025-10-13 07:43:49,054 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 03:44:48] 2025-10-13 07:43:49,057 | INFO     | did not find any defunct processes belonging to 7326
[2025-10-13 03:44:48] 2025-10-13 07:43:49,060 | INFO     | did not find any defunct processes belonging to 7326
[2025-10-13 03:44:48] 2025-10-13 07:43:49,060 | INFO     | ready for new job
[2025-10-13 03:44:48] 2025-10-13 07:43:49,060 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 03:44:48] 2025-10-13 07:43:49,062 | INFO     | ***************************************
[2025-10-13 03:44:48] 2025-10-13 07:43:49,062 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 03:44:48] 2025-10-13 07:43:49,062 | INFO     | ***************************************
[2025-10-13 03:44:48] 2025-10-13 07:43:49,062 | INFO     | 
[2025-10-13 03:44:48] 2025-10-13 07:43:49,062 | INFO     | architecture information:
[2025-10-13 03:44:48] 2025-10-13 07:43:49,063 | INFO     | executing command: cat /etc/os-release
[2025-10-13 03:44:48] 2025-10-13 07:43:49,081 | INFO     | cat /etc/os-release:
[2025-10-13 03:44:48] NAME="CentOS Linux"
[2025-10-13 03:44:48] VERSION="7 (Core)"
[2025-10-13 03:44:48] ID="centos"
[2025-10-13 03:44:48] ID_LIKE="rhel fedora"
[2025-10-13 03:44:48] VERSION_ID="7"
[2025-10-13 03:44:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 03:44:48] ANSI_COLOR="0;31"
[2025-10-13 03:44:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 03:44:48] HOME_URL="https://www.centos.org/"
[2025-10-13 03:44:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 03:44:48] 
[2025-10-13 03:44:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 03:44:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 03:44:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 03:44:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 03:44:48] 
[2025-10-13 03:44:48] 2025-10-13 07:43:49,082 | INFO     | ***************************************
[2025-10-13 03:44:48] 2025-10-13 07:43:49,585 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 03:44:48] 2025-10-13 07:43:49,605 | INFO     | sufficient remaining disk space (18587058176 B)
[2025-10-13 03:44:48] 2025-10-13 07:43:49,606 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 03:44:48] 2025-10-13 07:43:49,606 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 03:44:48] 2025-10-13 07:43:49,607 | INFO     | update_server=False
[2025-10-13 03:44:48] 2025-10-13 07:43:49,607 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 03:44:48] 2025-10-13 07:43:49,607 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 03:44:48] 2025-10-13 07:43:49,607 | INFO     | aborting loop
[2025-10-13 03:44:48] 2025-10-13 07:43:49,608 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 03:44:48] 2025-10-13 07:43:49,608 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 03:44:48] 2025-10-13 07:43:49,980 | INFO     | all data control threads have been joined
[2025-10-13 03:44:48] 2025-10-13 07:43:50,428 | INFO     | all payload control threads have been joined
[2025-10-13 03:44:48] 2025-10-13 07:43:50,521 | INFO     | all job control threads have been joined
[2025-10-13 03:44:48] 2025-10-13 07:43:50,613 | INFO     | [job] job monitor thread has finished
[2025-10-13 03:44:48] 2025-10-13 07:43:50,613 | INFO     | [job] retrieve thread has finished
[2025-10-13 03:44:48] 2025-10-13 07:43:50,614 | INFO     | [job] queue monitor thread has finished
[2025-10-13 03:44:48] 2025-10-13 07:43:50,832 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 03:44:48] 2025-10-13 07:43:50,854 | INFO     | [job] validate thread has finished
[2025-10-13 03:44:48] 2025-10-13 07:43:50,887 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 03:44:48] 2025-10-13 07:43:50,895 | INFO     | [data] copytool_in thread has finished
[2025-10-13 03:44:48] 2025-10-13 07:43:50,986 | INFO     | [data] control thread has finished
[2025-10-13 03:44:48] 2025-10-13 07:43:51,073 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 03:44:48] 2025-10-13 07:43:51,434 | INFO     | [payload] control thread has finished
[2025-10-13 03:44:48] 2025-10-13 07:43:51,527 | INFO     | [job] control thread has finished
[2025-10-13 03:44:48] 2025-10-13 07:43:51,552 | INFO     | [payload] failed_post thread has finished
[2025-10-13 03:44:48] 2025-10-13 07:43:51,556 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 03:44:48] 2025-10-13 07:43:52,099 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 03:44:48] 2025-10-13 07:43:52,153 | INFO     | [payload] validate_post thread has finished
[2025-10-13 03:44:48] 2025-10-13 07:43:53,079 | INFO     | [data] copytool_out thread has finished
[2025-10-13 03:44:48] 2025-10-13 07:43:53,614 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 03:44:48] 2025-10-13 07:44:19,105 | INFO     | PID=796 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j
[2025-10-13 03:44:48] 2025-10-13 07:44:19,106 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 03:44:48] 2025-10-13 07:44:19,106 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 03:44:48] 2025-10-13 07:44:19,106 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 03:44:48] 2025-10-13 07:44:41,953 | INFO     | [monitor] cgroup control has ended
[2025-10-13 03:44:48] 2025-10-13 07:44:42,595 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140552337147712)>', '<ExcThread(monitor, started 140551387080448)>']
[2025-10-13 03:44:48] 2025-10-13 07:44:43,218 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 03:44:48] 2025-10-13 07:44:43,219 | INFO     | [monitor] control thread has ended
[2025-10-13 03:44:48] 2025-10-13 07:44:47,611 | INFO     | all workflow threads have been joined
[2025-10-13 03:44:48] 2025-10-13 07:44:47,611 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 03:44:48] 2025-10-13 07:44:47,612 | INFO     | traces error code: 0
[2025-10-13 03:44:48] 2025-10-13 07:44:47,614 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 03:44:48] 2025-10-13 07:44:47,744 [wrapper] ==== pilot stdout END ====
[2025-10-13 03:44:48] 2025-10-13 07:44:47,750 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 03:44:48] 2025-10-13 07:44:47,755 [wrapper] pilotpid: 796
[2025-10-13 03:44:48] 2025-10-13 07:44:47,760 [wrapper] Pilot exit status: 0
[2025-10-13 03:44:48] 2025-10-13 07:44:47,779 [wrapper] pandaids: 6841069721
[2025-10-13 03:44:48] 2025-10-13 07:44:47,828 [wrapper] cleanup supervisor_pilot 32243 797
[2025-10-13 03:44:48] 2025-10-13 07:44:47,834 [wrapper] Test setup, not cleaning
[2025-10-13 03:44:48] 2025-10-13 07:44:47,839 [wrapper] apfmon messages muted
[2025-10-13 03:44:48] 2025-10-13 07:44:47,844 [wrapper] ==== wrapper stdout END ====
[2025-10-13 03:44:48] 2025-10-13 07:44:47,850 [wrapper] ==== wrapper stderr END ====
[2025-10-13 03:44:48]  *** Error codes and diagnostics ***
[2025-10-13 03:44:48]     "exeErrorCode": 0,
[2025-10-13 03:44:48]     "exeErrorDiag": "",
[2025-10-13 03:44:48]     "pilotErrorCode": 0,
[2025-10-13 03:44:48]     "pilotErrorDiag": "",
[2025-10-13 03:44:48]  *** Listing of results directory ***
[2025-10-13 03:44:48] total 407460
[2025-10-13 03:44:48] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 20:48 pilot3.tar.gz
[2025-10-13 03:44:48] -rwx------ 1 boincer umatlas     36292 Oct 12 21:02 runpilot2-wrapper.sh
[2025-10-13 03:44:48] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 21:02 queuedata.json
[2025-10-13 03:44:48] -rw-r--r-- 1 boincer umatlas       100 Oct 13 01:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 03:44:48] -rwxr-xr-x 1 boincer umatlas      7986 Oct 13 01:39 run_atlas
[2025-10-13 03:44:48] -rw-r--r-- 1 boincer umatlas       105 Oct 13 01:39 job.xml
[2025-10-13 03:44:48] -rw-r--r-- 2 boincer umatlas 219446352 Oct 13 01:39 EVNT.46676267._004717.pool.root.1
[2025-10-13 03:44:48] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 01:39 start_atlas.sh
[2025-10-13 03:44:48] drwxrwx--x 2 boincer umatlas      4096 Oct 13 01:39 shared
[2025-10-13 03:44:48] -rw-r--r-- 2 boincer umatlas    569678 Oct 13 01:39 input.tar.gz
[2025-10-13 03:44:48] -rw-r--r-- 1 boincer umatlas         0 Oct 13 01:39 boinc_lockfile
[2025-10-13 03:44:48] -rw-r--r-- 1 boincer umatlas      2549 Oct 13 01:39 pandaJob.out
[2025-10-13 03:44:48] -rw------- 1 boincer umatlas    973230 Oct 13 01:39 agis_schedconf.cvmfs.json
[2025-10-13 03:44:48] -rw------- 1 boincer umatlas   1560580 Oct 13 01:39 agis_ddmendpoints.agis.ALL.json
[2025-10-13 03:44:48] drwx------ 5 boincer umatlas      4096 Oct 13 01:39 pilot3
[2025-10-13 03:44:48] -rw-r--r-- 1 boincer umatlas      5910 Oct 13 03:37 init_data.xml
[2025-10-13 03:44:48] -rw------- 1 boincer umatlas 191068668 Oct 13 03:43 HITS.46676269._093761.pool.root.1
[2025-10-13 03:44:48] -rw-r--r-- 1 boincer umatlas       529 Oct 13 03:43 boinc_task_state.xml
[2025-10-13 03:44:48] -rw------- 1 boincer umatlas      1050 Oct 13 03:43 memory_monitor_summary.json
[2025-10-13 03:44:48] -rw------- 1 boincer umatlas    363785 Oct 13 03:43 log.46676269._093761.job.log.tgz.1
[2025-10-13 03:44:48] -rw------- 1 boincer umatlas      7851 Oct 13 03:43 heartbeat.json
[2025-10-13 03:44:48] -rw------- 1 boincer umatlas        95 Oct 13 03:44 pilot_heartbeat.json
[2025-10-13 03:44:48] -rw-r--r-- 1 boincer umatlas      8192 Oct 13 03:44 boinc_mmap_file
[2025-10-13 03:44:48] -rw-r--r-- 1 boincer umatlas        27 Oct 13 03:44 wrapper_checkpoint.txt
[2025-10-13 03:44:48] -rw------- 1 boincer umatlas      4744 Oct 13 03:44 pilotlog.txt
[2025-10-13 03:44:48] -rw------- 1 boincer umatlas   1051590 Oct 13 03:44 log.46676269._093761.job.log.1
[2025-10-13 03:44:48] -rw------- 1 boincer umatlas       357 Oct 13 03:44 output.list
[2025-10-13 03:44:48] -rw-r--r-- 1 boincer umatlas       620 Oct 13 03:44 runtime_log
[2025-10-13 03:44:48] -rw------- 1 boincer umatlas   1433600 Oct 13 03:44 result.tar.gz
[2025-10-13 03:44:48] -rw-r--r-- 1 boincer umatlas      8703 Oct 13 03:44 runtime_log.err
[2025-10-13 03:44:48] -rw------- 1 boincer umatlas       659 Oct 13 03:44 m49MDmn8LS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmwImNDmf3zdtn.diag
[2025-10-13 03:44:48] -rw-r--r-- 1 boincer umatlas     20872 Oct 13 03:44 stderr.txt
[2025-10-13 03:44:48] HITS file was successfully produced:
[2025-10-13 03:44:48] -rw------- 1 boincer umatlas 191068668 Oct 13 03:43 shared/HITS.pool.root.1
[2025-10-13 03:44:48]  *** Contents of shared directory: ***
[2025-10-13 03:44:48] total 402876
[2025-10-13 03:44:48] -rw-r--r-- 2 boincer umatlas 219446352 Oct 13 01:39 ATLAS.root_0
[2025-10-13 03:44:48] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 01:39 start_atlas.sh
[2025-10-13 03:44:48] -rw-r--r-- 2 boincer umatlas    569678 Oct 13 01:39 input.tar.gz
[2025-10-13 03:44:48] -rw------- 1 boincer umatlas 191068668 Oct 13 03:43 HITS.pool.root.1
[2025-10-13 03:44:48] -rw------- 1 boincer umatlas   1433600 Oct 13 03:44 result.tar.gz
03:44:49 (29580): run_atlas exited; CPU time 54338.011868
03:44:49 (29580): called boinc_finish(0)

</stderr_txt>
]]>

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