Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
02:41:45 (2819684): wrapper (7.7.26015): starting
02:41:45 (2819684): wrapper: running run_atlas (--nthreads 9)
[2025-10-13 02:41:45] Arguments: --nthreads 9
[2025-10-13 02:41:45] Threads: 9
[2025-10-13 02:41:45] Checking for CVMFS
[2025-10-13 02:41:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 02:41:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 02:41:45] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 02:41:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 02:41:45] 2.13.2.0 5242 6747 130200 151651 1 65 39112229 40960000 22180 16776704 0 23969657 99.744 14312721 32304 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 02:41:45] CVMFS is ok
[2025-10-13 02:41:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 02:41:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 02:41:45] Further information can be found at the LHC@home message board.
[2025-10-13 02:41:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 02:41:45] Checking for apptainer binary...
[2025-10-13 02:41:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 02:41:45] Running /usr/bin/apptainer --version
[2025-10-13 02:41:45] apptainer version 1.4.3-1.el9
[2025-10-13 02:41:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 02:41:46] c-212-1.aglt2.org
[2025-10-13 02:41:46] apptainer works
[2025-10-13 02:41:46] Set ATHENA_PROC_NUMBER=9
[2025-10-13 02:41:46] Set ATHENA_CORE_NUMBER=9
[2025-10-13 02:41:46] Starting ATLAS job with PandaID=6841069239
[2025-10-13 02:41:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 04:16:36]  *** The last 200 lines of the pilot log: ***
[2025-10-13 04:16:36] 2025-10-13 08:15:57,003 | INFO     | adding to output.list: log.46676269._093371.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/47/97/log.46676269._093371.job.log.tg
[2025-10-13 04:16:36] 2025-10-13 08:15:57,004 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 04:16:36] 2025-10-13 08:15:57,004 | INFO     | summary of transferred files:
[2025-10-13 04:16:36] 2025-10-13 08:15:57,004 | INFO     |  -- lfn=log.46676269._093371.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 04:16:36] 2025-10-13 08:15:57,004 | INFO     | stage-out finished correctly
[2025-10-13 04:16:36] 2025-10-13 08:15:57,148 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 04:16:36] 2025-10-13 08:15:57,640 | INFO     | job 6841069239 has state=finished
[2025-10-13 04:16:36] 2025-10-13 08:15:57,640 | INFO     | preparing for final server update for job 6841069239 in state='finished'
[2025-10-13 04:16:36] 2025-10-13 08:15:57,642 | INFO     | this job has now completed (state=finished)
[2025-10-13 04:16:36] 2025-10-13 08:15:57,642 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 04:16:36] 2025-10-13 08:15:57,643 | INFO     | log transfer has been attempted: DONE
[2025-10-13 04:16:36] 2025-10-13 08:15:57,643 | INFO     | job 6841069239 has finished - writing final server update
[2025-10-13 04:16:36] 2025-10-13 08:15:57,643 | INFO     | total number of processed events: 400 (read)
[2025-10-13 04:16:36] 2025-10-13 08:15:57,644 | INFO     | executing command: lscpu
[2025-10-13 04:16:36] 2025-10-13 08:15:57,706 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 04:16:36] 2025-10-13 08:15:58,298 | INFO     | time since job start (5633s) is within the limit (172800.0s)
[2025-10-13 04:16:36] 2025-10-13 08:15:58,588 | WARNING  | process 2829919 can no longer be monitored (due to stat problems) - aborting
[2025-10-13 04:16:36] 2025-10-13 08:15:58,589 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6841069239/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 04:16:36] 2025-10-13 08:15:58,589 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6841069239/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 04:16:36] 2025-10-13 08:15:58,590 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2025-10-13 04:16:36] 2025-10-13 08:15:58,590 | WARNING  | maxPSS not found in memory monitor output
[2025-10-13 04:16:36] 2025-10-13 08:15:58,591 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 3844796 B
[2025-10-13 04:16:36] 2025-10-13 08:15:58,591 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15791 B
[2025-10-13 04:16:36] 2025-10-13 08:15:58,591 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-10-13 04:16:36] 2025-10-13 08:16:00,305 | INFO     | time since job start (5635s) is within the limit (172800.0s)
[2025-10-13 04:16:36] 2025-10-13 08:16:02,312 | INFO     | time since job start (5637s) is within the limit (172800.0s)
[2025-10-13 04:16:36] 2025-10-13 08:16:02,800 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 04:16:36] 2025-10-13 08:16:02,814 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2973.544739583334
[2025-10-13 04:16:36] 2025-10-13 08:16:02,822 | INFO     | sufficient remaining disk space (125911957504 B)
[2025-10-13 04:16:36] 2025-10-13 08:16:02,822 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-10-13 04:16:36] 2025-10-13 08:16:02,832 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6841069239/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 04:16:36] 2025-10-13 08:16:02,833 | INFO     | extracted standard info from prmon json
[2025-10-13 04:16:36] 2025-10-13 08:16:02,833 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 04:16:36] 2025-10-13 08:16:02,833 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 04:16:36] 2025-10-13 08:16:02,833 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 04:16:36] 2025-10-13 08:16:02,833 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 04:16:36] 2025-10-13 08:16:02,835 | INFO     | fitting pss+swap vs Time
[2025-10-13 04:16:36] 2025-10-13 08:16:02,836 | INFO     | sum of square deviations: 190403570.0
[2025-10-13 04:16:36] 2025-10-13 08:16:02,836 | INFO     | sum of deviations: -17849098126.0
[2025-10-13 04:16:36] 2025-10-13 08:16:02,836 | INFO     | mean x: 1760340628.0
[2025-10-13 04:16:36] 2025-10-13 08:16:02,836 | INFO     | mean y: 2682340.811764706
[2025-10-13 04:16:36] 2025-10-13 08:16:02,836 | INFO     | -- intersect: 165023183817.52496
[2025-10-13 04:16:36] 2025-10-13 08:16:02,837 | INFO     | intersect: 165023183817.52496
[2025-10-13 04:16:36] 2025-10-13 08:16:02,837 | INFO     | chi2: 0.1439221046007416
[2025-10-13 04:16:36] 2025-10-13 08:16:02,837 | INFO     | -- intersect: 165023183817.52496
[2025-10-13 04:16:36] 2025-10-13 08:16:02,837 | INFO     | current memory leak: -93.74 B/s (using 85 data points, chi2=0.14)
[2025-10-13 04:16:36] 2025-10-13 08:16:02,837 | INFO     | could have reported an average CPU frequency of 3021 MHz (7 samples)
[2025-10-13 04:16:36] 2025-10-13 08:16:02,838 | INFO     | ..............................
[2025-10-13 04:16:36] 2025-10-13 08:16:02,838 | INFO     | . Timing measurements:
[2025-10-13 04:16:36] 2025-10-13 08:16:02,838 | INFO     | . get job = 0 s
[2025-10-13 04:16:36] 2025-10-13 08:16:02,838 | INFO     | . initial setup = 3 s
[2025-10-13 04:16:36] 2025-10-13 08:16:02,838 | INFO     | . payload setup = 9 s
[2025-10-13 04:16:36] 2025-10-13 08:16:02,838 | INFO     | . stage-in = 0 s
[2025-10-13 04:16:36] 2025-10-13 08:16:02,838 | INFO     | . payload execution = 5599 s
[2025-10-13 04:16:36] 2025-10-13 08:16:02,838 | INFO     | . stage-out = 0 s
[2025-10-13 04:16:36] 2025-10-13 08:16:02,838 | INFO     | . log creation = 0 s
[2025-10-13 04:16:36] 2025-10-13 08:16:02,838 | INFO     | ..............................
[2025-10-13 04:16:36] 2025-10-13 08:16:02,929 | INFO     | size of work directory /tmp/boinchome/slots/4/PanDA_Pilot-6841069239: 4149955 B (within 2537553920 B limit)
[2025-10-13 04:16:36] 2025-10-13 08:16:02,929 | INFO     | pfn file=/tmp/boinchome/slots/4/PanDA_Pilot-6841069239/HITS.46676269._093371.pool.root.1 does not exist (skip from workdir size calculation)
[2025-10-13 04:16:36] 2025-10-13 08:16:02,929 | INFO     | total size of present files: 0 B (workdir size: 4149955 B)
[2025-10-13 04:16:36] 2025-10-13 08:16:02,929 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/4/PanDA_Pilot-6841069239/HITS.46676269._093371.pool.root.1 since it does not exist
[2025-10-13 04:16:36] 2025-10-13 08:16:03,083 | INFO     | 
[2025-10-13 04:16:36] 2025-10-13 08:16:03,083 | INFO     | job summary report
[2025-10-13 04:16:36] 2025-10-13 08:16:03,084 | INFO     | --------------------------------------------------
[2025-10-13 04:16:36] 2025-10-13 08:16:03,084 | INFO     | PanDA job id: 6841069239
[2025-10-13 04:16:36] 2025-10-13 08:16:03,084 | INFO     | task id: 46676269
[2025-10-13 04:16:36] 2025-10-13 08:16:03,084 | INFO     | errors: (none)
[2025-10-13 04:16:36] 2025-10-13 08:16:03,084 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 04:16:36] 2025-10-13 08:16:03,084 | INFO     | pilot state: finished 
[2025-10-13 04:16:36] 2025-10-13 08:16:03,085 | INFO     | transexitcode: 0
[2025-10-13 04:16:36] 2025-10-13 08:16:03,085 | INFO     | exeerrorcode: 0
[2025-10-13 04:16:36] 2025-10-13 08:16:03,085 | INFO     | exeerrordiag: 
[2025-10-13 04:16:36] 2025-10-13 08:16:03,085 | INFO     | exitcode: 0
[2025-10-13 04:16:36] 2025-10-13 08:16:03,085 | INFO     | exitmsg: OK
[2025-10-13 04:16:36] 2025-10-13 08:16:03,085 | INFO     | cpuconsumptiontime: 35176 s
[2025-10-13 04:16:36] 2025-10-13 08:16:03,086 | INFO     | nevents: 400
[2025-10-13 04:16:36] 2025-10-13 08:16:03,086 | INFO     | neventsw: 0
[2025-10-13 04:16:36] 2025-10-13 08:16:03,086 | INFO     | pid: 2829919
[2025-10-13 04:16:36] 2025-10-13 08:16:03,086 | INFO     | pgrp: 2829919
[2025-10-13 04:16:36] 2025-10-13 08:16:03,086 | INFO     | corecount: 9
[2025-10-13 04:16:36] 2025-10-13 08:16:03,086 | INFO     | event service: False
[2025-10-13 04:16:36] 2025-10-13 08:16:03,087 | INFO     | sizes: {0: 2348685, 1: 2348884, 10: 2349146, 12: 2349174, 5612: 2375691, 5613: 2384873, 5619: 2385011}
[2025-10-13 04:16:36] 2025-10-13 08:16:03,087 | INFO     | --------------------------------------------------
[2025-10-13 04:16:36] 2025-10-13 08:16:03,087 | INFO     | 
[2025-10-13 04:16:36] 2025-10-13 08:16:03,087 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-10-13 04:16:36] 2025-10-13 08:16:03,104 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 04:16:36] 2025-10-13 08:16:03,104 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 04:16:36] 2025-10-13 08:16:03,105 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 04:16:36] 2025-10-13 08:16:03,106 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 04:16:36] 2025-10-13 08:16:03,106 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 04:16:36] 2025-10-13 08:16:03,106 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 04:16:36] 2025-10-13 08:16:03,106 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 04:16:36] 2025-10-13 08:16:03,106 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 04:16:36] 2025-10-13 08:16:03,107 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 04:16:36] 2025-10-13 08:16:03,107 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 04:16:36] 2025-10-13 08:16:03,107 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 04:16:36] 2025-10-13 08:16:03,107 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 04:16:36] 2025-10-13 08:16:03,107 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 04:16:36] 2025-10-13 08:16:03,107 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 04:16:36] 2025-10-13 08:16:03,108 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 04:16:36] 2025-10-13 08:16:03,108 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 04:16:36] 2025-10-13 08:16:03,108 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 04:16:36] 2025-10-13 08:16:03,108 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 04:16:36] 2025-10-13 08:16:03,108 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 04:16:36] 2025-10-13 08:16:03,108 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 04:16:36] 2025-10-13 08:16:03,108 | INFO     | job 6841069239 has completed (purged errors)
[2025-10-13 04:16:36] 2025-10-13 08:16:03,109 | INFO     | overall cleanup function is called
[2025-10-13 04:16:36] 2025-10-13 08:16:03,325 | INFO     | number of running child processes to parent process 2829919: 1
[2025-10-13 04:16:36] 2025-10-13 08:16:03,325 | INFO     | maximum number of monitored processes: 6
[2025-10-13 04:16:36] 2025-10-13 08:16:03,325 | INFO     | aborting job monitoring since job object (job id=6841069239) has expired
[2025-10-13 04:16:36] 2025-10-13 08:16:04,119 | INFO     | --- collectZombieJob: --- 10, [2829919]
[2025-10-13 04:16:36] 2025-10-13 08:16:04,120 | INFO     | zombie collector waiting for pid 2829919
[2025-10-13 04:16:36] 2025-10-13 08:16:04,120 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 04:16:36] 2025-10-13 08:16:04,120 | INFO     | collected zombie processes
[2025-10-13 04:16:36] 2025-10-13 08:16:04,120 | INFO     | will attempt to kill all subprocesses of pid=2829919
[2025-10-13 04:16:36] 2025-10-13 08:16:04,552 | INFO     | process IDs to be killed: [2829919] (in reverse order)
[2025-10-13 04:16:36] 2025-10-13 08:16:04,683 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 04:16:36] 2025-10-13 08:16:04,684 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 04:16:36] 2025-10-13 08:16:04,701 | INFO     | did not find any defunct processes belonging to 2829919
[2025-10-13 04:16:36] 2025-10-13 08:16:04,717 | INFO     | did not find any defunct processes belonging to 2829919
[2025-10-13 04:16:36] 2025-10-13 08:16:04,718 | INFO     | ready for new job
[2025-10-13 04:16:36] 2025-10-13 08:16:04,718 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 04:16:36] 2025-10-13 08:16:04,720 | INFO     | ***************************************
[2025-10-13 04:16:36] 2025-10-13 08:16:04,720 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 04:16:36] 2025-10-13 08:16:04,720 | INFO     | ***************************************
[2025-10-13 04:16:36] 2025-10-13 08:16:04,720 | INFO     | 
[2025-10-13 04:16:36] 2025-10-13 08:16:04,726 | INFO     | architecture information:
[2025-10-13 04:16:36] 2025-10-13 08:16:04,727 | INFO     | executing command: cat /etc/os-release
[2025-10-13 04:16:36] 2025-10-13 08:16:04,743 | INFO     | cat /etc/os-release:
[2025-10-13 04:16:36] NAME="CentOS Linux"
[2025-10-13 04:16:36] VERSION="7 (Core)"
[2025-10-13 04:16:36] ID="centos"
[2025-10-13 04:16:36] ID_LIKE="rhel fedora"
[2025-10-13 04:16:36] VERSION_ID="7"
[2025-10-13 04:16:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 04:16:36] ANSI_COLOR="0;31"
[2025-10-13 04:16:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 04:16:36] HOME_URL="https://www.centos.org/"
[2025-10-13 04:16:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 04:16:36] 
[2025-10-13 04:16:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 04:16:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 04:16:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 04:16:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 04:16:36] 
[2025-10-13 04:16:36] 2025-10-13 08:16:04,743 | INFO     | ***************************************
[2025-10-13 04:16:36] 2025-10-13 08:16:05,245 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-10-13 04:16:36] 2025-10-13 08:16:05,264 | INFO     | sufficient remaining disk space (125916151808 B)
[2025-10-13 04:16:36] 2025-10-13 08:16:05,264 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 04:16:36] 2025-10-13 08:16:05,265 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 04:16:36] 2025-10-13 08:16:05,265 | INFO     | update_server=False
[2025-10-13 04:16:36] 2025-10-13 08:16:05,265 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 04:16:36] 2025-10-13 08:16:05,265 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 04:16:36] 2025-10-13 08:16:05,266 | INFO     | aborting loop
[2025-10-13 04:16:36] 2025-10-13 08:16:05,268 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 04:16:36] 2025-10-13 08:16:05,491 | INFO     | all data control threads have been joined
[2025-10-13 04:16:36] 2025-10-13 08:16:05,736 | INFO     | all job control threads have been joined
[2025-10-13 04:16:36] 2025-10-13 08:16:06,270 | INFO     | [job] retrieve thread has finished
[2025-10-13 04:16:36] 2025-10-13 08:16:06,272 | INFO     | [job] job monitor thread has finished
[2025-10-13 04:16:36] 2025-10-13 08:16:06,297 | INFO     | all payload control threads have been joined
[2025-10-13 04:16:36] 2025-10-13 08:16:06,310 | INFO     | [payload] failed_post thread has finished
[2025-10-13 04:16:36] 2025-10-13 08:16:06,496 | INFO     | [data] control thread has finished
[2025-10-13 04:16:36] 2025-10-13 08:16:06,544 | INFO     | [data] copytool_in thread has finished
[2025-10-13 04:16:36] 2025-10-13 08:16:06,740 | INFO     | [job] control thread has finished
[2025-10-13 04:16:36] 2025-10-13 08:16:06,891 | INFO     | [payload] validate_post thread has finished
[2025-10-13 04:16:36] 2025-10-13 08:16:06,974 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 04:16:36] 2025-10-13 08:16:07,242 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 04:16:36] 2025-10-13 08:16:07,274 | INFO     | [data] copytool_out thread has finished
[2025-10-13 04:16:36] 2025-10-13 08:16:07,302 | INFO     | [payload] control thread has finished
[2025-10-13 04:16:36] 2025-10-13 08:16:07,664 | INFO     | [job] validate thread has finished
[2025-10-13 04:16:36] 2025-10-13 08:16:07,724 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 04:16:36] 2025-10-13 08:16:07,741 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 04:16:36] 2025-10-13 08:16:07,941 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 04:16:36] 2025-10-13 08:16:08,947 | INFO     | [job] queue monitor thread has finished
[2025-10-13 04:16:36] 2025-10-13 08:16:11,750 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 04:16:36] 2025-10-13 08:16:13,395 | INFO     | [monitor] cgroup control has ended
[2025-10-13 04:16:36] 2025-10-13 08:16:16,034 | INFO     | job.realtimelogging is not enabled
[2025-10-13 04:16:36] 2025-10-13 08:16:17,039 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 04:16:36] 2025-10-13 08:16:17,084 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140525605930816)>', '<ExcThread(monitor, started 140525105551104)>']
[2025-10-13 04:16:36] 2025-10-13 08:16:22,088 | INFO     | all workflow threads have been joined
[2025-10-13 04:16:36] 2025-10-13 08:16:22,088 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 04:16:36] 2025-10-13 08:16:22,089 | INFO     | traces error code: 0
[2025-10-13 04:16:36] 2025-10-13 08:16:22,089 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 04:16:36] 2025-10-13 08:16:35,834 | INFO     | PID=2823393 has CPU usage=6.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 04:16:36] 2025-10-13 08:16:35,834 | INFO     | .. there are 25 such processes running
[2025-10-13 04:16:36] 2025-10-13 08:16:35,834 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 04:16:36] 2025-10-13 08:16:35,835 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 04:16:36] 2025-10-13 08:16:35,835 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 04:16:36] 2025-10-13 08:16:35,835 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 04:16:36] 2025-10-13 08:16:35,835 | INFO     | [monitor] control thread has ended
[2025-10-13 04:16:36] 2025-10-13 08:16:36,062 [wrapper] ==== pilot stdout END ====
[2025-10-13 04:16:36] 2025-10-13 08:16:36,069 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 04:16:36] 2025-10-13 08:16:36,073 [wrapper] pilotpid: 2823393
[2025-10-13 04:16:36] 2025-10-13 08:16:36,076 [wrapper] Pilot exit status: 0
[2025-10-13 04:16:36] 2025-10-13 08:16:36,089 [wrapper] pandaids: 6841069239
[2025-10-13 04:16:36] 2025-10-13 08:16:36,189 [wrapper] cleanup supervisor_pilot 3105837 2823394
[2025-10-13 04:16:36] 2025-10-13 08:16:36,193 [wrapper] Test setup, not cleaning
[2025-10-13 04:16:36] 2025-10-13 08:16:36,196 [wrapper] apfmon messages muted
[2025-10-13 04:16:36] 2025-10-13 08:16:36,199 [wrapper] ==== wrapper stdout END ====
[2025-10-13 04:16:36] 2025-10-13 08:16:36,203 [wrapper] ==== wrapper stderr END ====
[2025-10-13 04:16:36]  *** Error codes and diagnostics ***
[2025-10-13 04:16:36]     "exeErrorCode": 0,
[2025-10-13 04:16:36]     "exeErrorDiag": "",
[2025-10-13 04:16:36]     "pilotErrorCode": 0,
[2025-10-13 04:16:36]     "pilotErrorDiag": "",
[2025-10-13 04:16:36]  *** Listing of results directory ***
[2025-10-13 04:16:36] total 409412
[2025-10-13 04:16:36] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 20:11 pilot3.tar.gz
[2025-10-13 04:16:36] -rwx------. 1 boincer umatlas     36292 Oct 12 20:40 runpilot2-wrapper.sh
[2025-10-13 04:16:36] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 20:40 queuedata.json
[2025-10-13 04:16:36] -rw-r--r--. 1 boincer umatlas       100 Oct 13 02:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 04:16:36] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 02:41 run_atlas
[2025-10-13 04:16:36] -rw-r--r--. 1 boincer umatlas       105 Oct 13 02:41 job.xml
[2025-10-13 04:16:36] -rw-r--r--. 2 boincer umatlas 219903792 Oct 13 02:41 EVNT.46676267._004701.pool.root.1
[2025-10-13 04:16:36] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 02:41 start_atlas.sh
[2025-10-13 04:16:36] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 02:41 shared
[2025-10-13 04:16:36] -rw-r--r--. 2 boincer umatlas    569679 Oct 13 02:41 input.tar.gz
[2025-10-13 04:16:36] -rw-r--r--. 1 boincer umatlas         0 Oct 13 02:41 boinc_lockfile
[2025-10-13 04:16:36] -rw-r--r--. 1 boincer umatlas      2549 Oct 13 02:41 pandaJob.out
[2025-10-13 04:16:36] -rw-------. 1 boincer umatlas    973230 Oct 13 02:42 agis_schedconf.cvmfs.json
[2025-10-13 04:16:36] -rw-------. 1 boincer umatlas   1560580 Oct 13 02:42 agis_ddmendpoints.agis.ALL.json
[2025-10-13 04:16:36] drwx------. 5 boincer umatlas      4096 Oct 13 02:42 pilot3
[2025-10-13 04:16:36] -rw-r--r--. 1 boincer umatlas      6946 Oct 13 04:10 init_data.xml
[2025-10-13 04:16:36] -rw-------. 1 boincer umatlas 193081772 Oct 13 04:15 HITS.46676269._093371.pool.root.1
[2025-10-13 04:16:36] -rw-r--r--. 1 boincer umatlas       529 Oct 13 04:15 boinc_task_state.xml
[2025-10-13 04:16:36] -rw-------. 1 boincer umatlas        95 Oct 13 04:15 pilot_heartbeat.json
[2025-10-13 04:16:36] -rw-------. 1 boincer umatlas      1032 Oct 13 04:15 memory_monitor_summary.json
[2025-10-13 04:16:36] -rw-------. 1 boincer umatlas    367454 Oct 13 04:15 log.46676269._093371.job.log.tgz.1
[2025-10-13 04:16:36] -rw-------. 1 boincer umatlas      7778 Oct 13 04:16 heartbeat.json
[2025-10-13 04:16:36] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 04:16 boinc_mmap_file
[2025-10-13 04:16:36] -rw-r--r--. 1 boincer umatlas        27 Oct 13 04:16 wrapper_checkpoint.txt
[2025-10-13 04:16:36] -rw-------. 1 boincer umatlas       823 Oct 13 04:16 pilotlog.txt
[2025-10-13 04:16:36] -rw-------. 1 boincer umatlas    806438 Oct 13 04:16 log.46676269._093371.job.log.1
[2025-10-13 04:16:36] -rw-------. 1 boincer umatlas       357 Oct 13 04:16 output.list
[2025-10-13 04:16:36] -rw-r--r--. 1 boincer umatlas       620 Oct 13 04:16 runtime_log
[2025-10-13 04:16:36] -rw-------. 1 boincer umatlas   1198080 Oct 13 04:16 result.tar.gz
[2025-10-13 04:16:36] -rw-r--r--. 1 boincer umatlas      8698 Oct 13 04:16 runtime_log.err
[2025-10-13 04:16:36] -rw-------. 1 boincer umatlas       652 Oct 13 04:16 3bFODmZnLS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmzDmNDm0ylt2m.diag
[2025-10-13 04:16:36] -rw-r--r--. 1 boincer umatlas     22504 Oct 13 04:16 stderr.txt
[2025-10-13 04:16:36] HITS file was successfully produced:
[2025-10-13 04:16:36] -rw-------. 1 boincer umatlas 193081772 Oct 13 04:15 shared/HITS.pool.root.1
[2025-10-13 04:16:36]  *** Contents of shared directory: ***
[2025-10-13 04:16:36] total 405068
[2025-10-13 04:16:36] -rw-r--r--. 2 boincer umatlas 219903792 Oct 13 02:41 ATLAS.root_0
[2025-10-13 04:16:36] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 02:41 start_atlas.sh
[2025-10-13 04:16:36] -rw-r--r--. 2 boincer umatlas    569679 Oct 13 02:41 input.tar.gz
[2025-10-13 04:16:36] -rw-------. 1 boincer umatlas 193081772 Oct 13 04:15 HITS.pool.root.1
[2025-10-13 04:16:36] -rw-------. 1 boincer umatlas   1198080 Oct 13 04:16 result.tar.gz
04:16:37 (2819684): run_atlas exited; CPU time 35314.969434
04:16:37 (2819684): called boinc_finish(0)

</stderr_txt>
]]>

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