Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
01:37:38 (14255): wrapper (7.7.26015): starting
01:37:38 (14255): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 01:37:38] Arguments: --nthreads 8
[2025-10-13 01:37:38] Threads: 8
[2025-10-13 01:37:38] Checking for CVMFS
[2025-10-13 01:37:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 01:37:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 01:37:38] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 01:37:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 01:37:38] 2.11.2.0 2913 9530 74180 151650 1 56 16520523 20275200 1 130560 0 6261562 99.989 320216 39987 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 01:37:38] CVMFS is ok
[2025-10-13 01:37:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 01:37:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 01:37:38] Further information can be found at the LHC@home message board.
[2025-10-13 01:37:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 01:37:38] Checking for apptainer binary...
[2025-10-13 01:37:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 01:37:38] Running /usr/bin/apptainer --version
[2025-10-13 01:37:38] apptainer version 1.3.2-1.el7
[2025-10-13 01:37:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 01:37:40] c-115-15.aglt2.org
[2025-10-13 01:37:40] apptainer works
[2025-10-13 01:37:40] Set ATHENA_PROC_NUMBER=8
[2025-10-13 01:37:40] Set ATHENA_CORE_NUMBER=8
[2025-10-13 01:37:40] Starting ATLAS job with PandaID=6841069146
[2025-10-13 01:37:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 03:33:14]  *** The last 200 lines of the pilot log: ***
[2025-10-13 03:33:14] 2025-10-13 07:32:08,884 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 03:33:14] 2025-10-13 07:32:08,884 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 03:33:14] 2025-10-13 07:32:08,885 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 03:33:14] 2025-10-13 07:32:08,885 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 03:33:14] 2025-10-13 07:32:08,888 | INFO     | fitting pss+swap vs Time
[2025-10-13 03:33:14] 2025-10-13 07:32:08,888 | INFO     | sum of square deviations: 435610028.0
[2025-10-13 03:33:14] 2025-10-13 07:32:08,889 | INFO     | sum of deviations: -2589058196.999998
[2025-10-13 03:33:14] 2025-10-13 07:32:08,889 | INFO     | mean x: 1760337293.5
[2025-10-13 03:33:14] 2025-10-13 07:32:08,889 | INFO     | mean y: 2607377.2321428573
[2025-10-13 03:33:14] 2025-10-13 07:32:08,889 | INFO     | -- intersect: 10465212474.149164
[2025-10-13 03:33:14] 2025-10-13 07:32:08,889 | INFO     | intersect: 10465212474.149164
[2025-10-13 03:33:14] 2025-10-13 07:32:08,890 | INFO     | chi2: 1.6096347090296443
[2025-10-13 03:33:14] 2025-10-13 07:32:08,890 | INFO     | sum of square deviations: 379832238.0
[2025-10-13 03:33:14] 2025-10-13 07:32:08,890 | INFO     | sum of deviations: -1369229668.000002
[2025-10-13 03:33:14] 2025-10-13 07:32:08,891 | INFO     | mean x: 1760337141.0
[2025-10-13 03:33:14] 2025-10-13 07:32:08,891 | INFO     | mean y: 2610714.6074766354
[2025-10-13 03:33:14] 2025-10-13 07:32:08,891 | INFO     | -- intersect: 6348322315.6841135
[2025-10-13 03:33:14] 2025-10-13 07:32:08,891 | INFO     | intersect: 6348322315.6841135
[2025-10-13 03:33:14] 2025-10-13 07:32:08,891 | INFO     | chi2: 1.6122326522715138
[2025-10-13 03:33:14] 2025-10-13 07:32:08,891 | INFO     | current chi2=1.6122326522715138 (change=-0.16139955402897657 %)
[2025-10-13 03:33:14] 2025-10-13 07:32:08,891 | INFO     | right removable region: 106
[2025-10-13 03:33:14] 2025-10-13 07:32:08,892 | INFO     | sum of square deviations: 379832238.0
[2025-10-13 03:33:14] 2025-10-13 07:32:08,892 | INFO     | sum of deviations: -19552455294.0
[2025-10-13 03:33:14] 2025-10-13 07:32:08,892 | INFO     | mean x: 1760337446.0
[2025-10-13 03:33:14] 2025-10-13 07:32:08,892 | INFO     | mean y: 2652824.4392523365
[2025-10-13 03:33:14] 2025-10-13 07:32:08,892 | INFO     | -- intersect: 90618761126.62381
[2025-10-13 03:33:14] 2025-10-13 07:32:08,893 | INFO     | intersect: 90618761126.62381
[2025-10-13 03:33:14] 2025-10-13 07:32:08,893 | INFO     | chi2: 0.15357176352497803
[2025-10-13 03:33:14] 2025-10-13 07:32:08,893 | INFO     | current chi2=0.15357176352497803 (change=90.45921645057234 %)
[2025-10-13 03:33:14] 2025-10-13 07:32:08,893 | INFO     | sum of square deviations: 329031285.5
[2025-10-13 03:33:14] 2025-10-13 07:32:08,894 | INFO     | sum of deviations: -21283800177.000004
[2025-10-13 03:33:14] 2025-10-13 07:32:08,894 | INFO     | mean x: 1760337598.5
[2025-10-13 03:33:14] 2025-10-13 07:32:08,894 | INFO     | mean y: 2657869.254901961
[2025-10-13 03:33:14] 2025-10-13 07:32:08,894 | INFO     | -- intersect: 113872296841.72902
[2025-10-13 03:33:14] 2025-10-13 07:32:08,894 | INFO     | intersect: 113872296841.72902
[2025-10-13 03:33:14] 2025-10-13 07:32:08,894 | INFO     | chi2: 0.08671614704770457
[2025-10-13 03:33:14] 2025-10-13 07:32:08,894 | INFO     | current chi2=0.08671614704770457 (change=43.53379484790482 %)
[2025-10-13 03:33:14] 2025-10-13 07:32:08,895 | INFO     | sum of square deviations: 282974608.0
[2025-10-13 03:33:14] 2025-10-13 07:32:08,895 | INFO     | sum of deviations: -19607240980.000004
[2025-10-13 03:33:14] 2025-10-13 07:32:08,895 | INFO     | mean x: 1760337751.0
[2025-10-13 03:33:14] 2025-10-13 07:32:08,895 | INFO     | mean y: 2652294.649484536
[2025-10-13 03:33:14] 2025-10-13 07:32:08,895 | INFO     | -- intersect: 121976022039.71243
[2025-10-13 03:33:14] 2025-10-13 07:32:08,895 | INFO     | intersect: 121976022039.71243
[2025-10-13 03:33:14] 2025-10-13 07:32:08,896 | INFO     | chi2: 0.08126569770328944
[2025-10-13 03:33:14] 2025-10-13 07:32:08,896 | INFO     | current chi2=0.08126569770328944 (change=6.285391510091785 %)
[2025-10-13 03:33:14] 2025-10-13 07:32:08,896 | INFO     | left removable region: 30
[2025-10-13 03:33:14] 2025-10-13 07:32:08,896 | INFO     | sum of square deviations: 136095575.0
[2025-10-13 03:33:14] 2025-10-13 07:32:08,896 | INFO     | sum of deviations: -11635583287.000002
[2025-10-13 03:33:14] 2025-10-13 07:32:08,896 | INFO     | mean x: 1760338025.5
[2025-10-13 03:33:14] 2025-10-13 07:32:08,897 | INFO     | mean y: 2631804.763157895
[2025-10-13 03:33:14] 2025-10-13 07:32:08,897 | INFO     | -- intersect: 150503922599.69446
[2025-10-13 03:33:14] 2025-10-13 07:32:08,897 | INFO     | intersect: 150503922599.69446
[2025-10-13 03:33:14] 2025-10-13 07:32:08,897 | INFO     | chi2: 0.06924561829790032
[2025-10-13 03:33:14] 2025-10-13 07:32:08,897 | INFO     | -- intersect: 150503922599.69446
[2025-10-13 03:33:14] 2025-10-13 07:32:08,897 | INFO     | current memory leak: -85.50 B/s (using 76 data points, chi2=0.07)
[2025-10-13 03:33:14] 2025-10-13 07:32:08,898 | INFO     | could have reported an average CPU frequency of 2088 MHz (7 samples)
[2025-10-13 03:33:14] 2025-10-13 07:32:08,898 | INFO     | ..............................
[2025-10-13 03:33:14] 2025-10-13 07:32:08,898 | INFO     | . Timing measurements:
[2025-10-13 03:33:14] 2025-10-13 07:32:08,898 | INFO     | . get job = 0 s
[2025-10-13 03:33:14] 2025-10-13 07:32:08,898 | INFO     | . initial setup = 2 s
[2025-10-13 03:33:14] 2025-10-13 07:32:08,898 | INFO     | . payload setup = 8 s
[2025-10-13 03:33:14] 2025-10-13 07:32:08,898 | INFO     | . stage-in = 0 s
[2025-10-13 03:33:14] 2025-10-13 07:32:08,898 | INFO     | . payload execution = 6811 s
[2025-10-13 03:33:14] 2025-10-13 07:32:08,898 | INFO     | . stage-out = 0 s
[2025-10-13 03:33:14] 2025-10-13 07:32:08,899 | INFO     | . log creation = 0 s
[2025-10-13 03:33:14] 2025-10-13 07:32:08,899 | INFO     | ..............................
[2025-10-13 03:33:14] 2025-10-13 07:32:08,991 | INFO     | 
[2025-10-13 03:33:14] 2025-10-13 07:32:08,991 | INFO     | job summary report
[2025-10-13 03:33:14] 2025-10-13 07:32:08,991 | INFO     | --------------------------------------------------
[2025-10-13 03:33:14] 2025-10-13 07:32:08,991 | INFO     | PanDA job id: 6841069146
[2025-10-13 03:33:14] 2025-10-13 07:32:08,992 | INFO     | task id: 46676269
[2025-10-13 03:33:14] 2025-10-13 07:32:08,992 | INFO     | errors: (none)
[2025-10-13 03:33:14] 2025-10-13 07:32:08,992 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 03:33:14] 2025-10-13 07:32:08,992 | INFO     | pilot state: finished 
[2025-10-13 03:33:14] 2025-10-13 07:32:08,992 | INFO     | transexitcode: 0
[2025-10-13 03:33:14] 2025-10-13 07:32:08,992 | INFO     | exeerrorcode: 0
[2025-10-13 03:33:14] 2025-10-13 07:32:08,993 | INFO     | exeerrordiag: 
[2025-10-13 03:33:14] 2025-10-13 07:32:08,993 | INFO     | exitcode: 0
[2025-10-13 03:33:14] 2025-10-13 07:32:08,993 | INFO     | exitmsg: OK
[2025-10-13 03:33:14] 2025-10-13 07:32:08,993 | INFO     | cpuconsumptiontime: 50092 s
[2025-10-13 03:33:14] 2025-10-13 07:32:08,993 | INFO     | nevents: 400
[2025-10-13 03:33:14] 2025-10-13 07:32:08,993 | INFO     | neventsw: 0
[2025-10-13 03:33:14] 2025-10-13 07:32:08,994 | INFO     | pid: 24399
[2025-10-13 03:33:14] 2025-10-13 07:32:08,994 | INFO     | pgrp: 24399
[2025-10-13 03:33:14] 2025-10-13 07:32:08,994 | INFO     | corecount: 8
[2025-10-13 03:33:14] 2025-10-13 07:32:08,994 | INFO     | event service: False
[2025-10-13 03:33:14] 2025-10-13 07:32:08,994 | INFO     | sizes: {0: 2348857, 6: 2349119, 11: 2349147, 6823: 2376285, 6824: 2385283, 6828: 2385339, 6835: 2385661}
[2025-10-13 03:33:14] 2025-10-13 07:32:08,995 | INFO     | --------------------------------------------------
[2025-10-13 03:33:14] 2025-10-13 07:32:08,995 | INFO     | 
[2025-10-13 03:33:14] 2025-10-13 07:32:08,995 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 03:33:14] 2025-10-13 07:32:09,022 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 03:33:14] 2025-10-13 07:32:09,023 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 03:33:14] 2025-10-13 07:32:09,023 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 03:33:14] 2025-10-13 07:32:09,023 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 03:33:14] 2025-10-13 07:32:09,023 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 03:33:14] 2025-10-13 07:32:09,023 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 03:33:14] 2025-10-13 07:32:09,024 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 03:33:14] 2025-10-13 07:32:09,024 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 03:33:14] 2025-10-13 07:32:09,024 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 03:33:14] 2025-10-13 07:32:09,024 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 03:33:14] 2025-10-13 07:32:09,024 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 03:33:14] 2025-10-13 07:32:09,025 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 03:33:14] 2025-10-13 07:32:09,025 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 03:33:14] 2025-10-13 07:32:09,025 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 03:33:14] 2025-10-13 07:32:09,025 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 03:33:14] 2025-10-13 07:32:09,025 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 03:33:14] 2025-10-13 07:32:09,025 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 03:33:14] 2025-10-13 07:32:09,026 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 03:33:14] 2025-10-13 07:32:09,026 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 03:33:14] 2025-10-13 07:32:09,026 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 03:33:14] 2025-10-13 07:32:09,026 | INFO     | job 6841069146 has completed (purged errors)
[2025-10-13 03:33:14] 2025-10-13 07:32:09,027 | INFO     | overall cleanup function is called
[2025-10-13 03:33:14] 2025-10-13 07:32:10,034 | INFO     | --- collectZombieJob: --- 10, [24399]
[2025-10-13 03:33:14] 2025-10-13 07:32:10,034 | INFO     | zombie collector waiting for pid 24399
[2025-10-13 03:33:14] 2025-10-13 07:32:10,035 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 03:33:14] 2025-10-13 07:32:10,035 | INFO     | collected zombie processes
[2025-10-13 03:33:14] 2025-10-13 07:32:10,035 | INFO     | will attempt to kill all subprocesses of pid=24399
[2025-10-13 03:33:14] 2025-10-13 07:32:10,116 | INFO     | process IDs to be killed: [24399] (in reverse order)
[2025-10-13 03:33:14] 2025-10-13 07:32:10,172 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 03:33:14] 2025-10-13 07:32:10,173 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 03:33:14] 2025-10-13 07:32:10,177 | INFO     | did not find any defunct processes belonging to 24399
[2025-10-13 03:33:14] 2025-10-13 07:32:10,179 | INFO     | did not find any defunct processes belonging to 24399
[2025-10-13 03:33:14] 2025-10-13 07:32:10,179 | INFO     | ready for new job
[2025-10-13 03:33:14] 2025-10-13 07:32:10,180 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 03:33:14] 2025-10-13 07:32:10,182 | INFO     | ***************************************
[2025-10-13 03:33:14] 2025-10-13 07:32:10,182 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 03:33:14] 2025-10-13 07:32:10,182 | INFO     | ***************************************
[2025-10-13 03:33:14] 2025-10-13 07:32:10,182 | INFO     | 
[2025-10-13 03:33:14] 2025-10-13 07:32:10,183 | INFO     | architecture information:
[2025-10-13 03:33:14] 2025-10-13 07:32:10,183 | INFO     | executing command: cat /etc/os-release
[2025-10-13 03:33:14] 2025-10-13 07:32:10,201 | INFO     | cat /etc/os-release:
[2025-10-13 03:33:14] NAME="CentOS Linux"
[2025-10-13 03:33:14] VERSION="7 (Core)"
[2025-10-13 03:33:14] ID="centos"
[2025-10-13 03:33:14] ID_LIKE="rhel fedora"
[2025-10-13 03:33:14] VERSION_ID="7"
[2025-10-13 03:33:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 03:33:14] ANSI_COLOR="0;31"
[2025-10-13 03:33:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 03:33:14] HOME_URL="https://www.centos.org/"
[2025-10-13 03:33:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 03:33:14] 
[2025-10-13 03:33:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 03:33:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 03:33:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 03:33:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 03:33:14] 
[2025-10-13 03:33:14] 2025-10-13 07:32:10,201 | INFO     | ***************************************
[2025-10-13 03:33:14] 2025-10-13 07:32:10,705 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 03:33:14] 2025-10-13 07:32:10,726 | INFO     | sufficient remaining disk space (18587058176 B)
[2025-10-13 03:33:14] 2025-10-13 07:32:10,726 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 03:33:14] 2025-10-13 07:32:10,727 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 03:33:14] 2025-10-13 07:32:10,727 | INFO     | update_server=False
[2025-10-13 03:33:14] 2025-10-13 07:32:10,727 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 03:33:14] 2025-10-13 07:32:10,727 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 03:33:14] 2025-10-13 07:32:10,728 | INFO     | aborting loop
[2025-10-13 03:33:14] 2025-10-13 07:32:10,728 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 03:33:14] 2025-10-13 07:32:10,933 | INFO     | all payload control threads have been joined
[2025-10-13 03:33:14] 2025-10-13 07:32:11,166 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 03:33:14] 2025-10-13 07:32:11,277 | INFO     | all data control threads have been joined
[2025-10-13 03:33:14] 2025-10-13 07:32:11,471 | INFO     | all job control threads have been joined
[2025-10-13 03:33:14] 2025-10-13 07:32:11,733 | INFO     | [job] retrieve thread has finished
[2025-10-13 03:33:14] 2025-10-13 07:32:11,733 | INFO     | [job] job monitor thread has finished
[2025-10-13 03:33:14] 2025-10-13 07:32:11,734 | INFO     | [job] queue monitor thread has finished
[2025-10-13 03:33:14] 2025-10-13 07:32:11,886 | INFO     | [data] copytool_in thread has finished
[2025-10-13 03:33:14] 2025-10-13 07:32:11,939 | INFO     | [payload] control thread has finished
[2025-10-13 03:33:14] 2025-10-13 07:32:12,088 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 03:33:14] 2025-10-13 07:32:12,092 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 03:33:14] 2025-10-13 07:32:12,122 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 03:33:14] 2025-10-13 07:32:12,155 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 03:33:14] 2025-10-13 07:32:12,280 | INFO     | [data] control thread has finished
[2025-10-13 03:33:14] 2025-10-13 07:32:12,448 | INFO     | [payload] failed_post thread has finished
[2025-10-13 03:33:14] 2025-10-13 07:32:12,476 | INFO     | [job] control thread has finished
[2025-10-13 03:33:14] 2025-10-13 07:32:12,486 | INFO     | [payload] validate_post thread has finished
[2025-10-13 03:33:14] 2025-10-13 07:32:13,024 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 03:33:14] 2025-10-13 07:32:13,172 | INFO     | [data] copytool_out thread has finished
[2025-10-13 03:33:14] 2025-10-13 07:32:13,188 | INFO     | [job] validate thread has finished
[2025-10-13 03:33:14] 2025-10-13 07:32:16,128 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 03:33:14] 2025-10-13 07:32:41,762 | INFO     | PID=17935 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-13 03:33:14] 2025-10-13 07:32:41,763 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 03:33:14] 2025-10-13 07:32:41,763 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 03:33:14] 2025-10-13 07:32:41,763 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 03:33:14] 2025-10-13 07:33:07,995 | INFO     | [monitor] cgroup control has ended
[2025-10-13 03:33:14] 2025-10-13 07:33:09,001 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140256653817664)>', '<ExcThread(monitor, started 140255747356416)>']
[2025-10-13 03:33:14] 2025-10-13 07:33:09,883 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 03:33:14] 2025-10-13 07:33:09,883 | INFO     | [monitor] control thread has ended
[2025-10-13 03:33:14] 2025-10-13 07:33:14,005 | INFO     | all workflow threads have been joined
[2025-10-13 03:33:14] 2025-10-13 07:33:14,005 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 03:33:14] 2025-10-13 07:33:14,006 | INFO     | traces error code: 0
[2025-10-13 03:33:14] 2025-10-13 07:33:14,007 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 03:33:14] 2025-10-13 07:33:14,128 [wrapper] ==== pilot stdout END ====
[2025-10-13 03:33:14] 2025-10-13 07:33:14,133 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 03:33:14] 2025-10-13 07:33:14,138 [wrapper] pilotpid: 17935
[2025-10-13 03:33:14] 2025-10-13 07:33:14,142 [wrapper] Pilot exit status: 0
[2025-10-13 03:33:14] 2025-10-13 07:33:14,160 [wrapper] pandaids: 6841069146
[2025-10-13 03:33:14] 2025-10-13 07:33:14,214 [wrapper] cleanup supervisor_pilot  4234 17936
[2025-10-13 03:33:14] 2025-10-13 07:33:14,219 [wrapper] Test setup, not cleaning
[2025-10-13 03:33:14] 2025-10-13 07:33:14,223 [wrapper] apfmon messages muted
[2025-10-13 03:33:14] 2025-10-13 07:33:14,228 [wrapper] ==== wrapper stdout END ====
[2025-10-13 03:33:14] 2025-10-13 07:33:14,233 [wrapper] ==== wrapper stderr END ====
[2025-10-13 03:33:14]  *** Error codes and diagnostics ***
[2025-10-13 03:33:14]     "exeErrorCode": 0,
[2025-10-13 03:33:14]     "exeErrorDiag": "",
[2025-10-13 03:33:14]     "pilotErrorCode": 0,
[2025-10-13 03:33:14]     "pilotErrorDiag": "",
[2025-10-13 03:33:14]  *** Listing of results directory ***
[2025-10-13 03:33:14] total 413228
[2025-10-13 03:33:14] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 20:11 pilot3.tar.gz
[2025-10-13 03:33:14] -rwx------ 1 boincer umatlas     36292 Oct 12 20:43 runpilot2-wrapper.sh
[2025-10-13 03:33:14] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 20:43 queuedata.json
[2025-10-13 03:33:14] -rw-r--r-- 1 boincer umatlas       100 Oct 13 01:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 03:33:14] -rwxr-xr-x 1 boincer umatlas      7986 Oct 13 01:37 run_atlas
[2025-10-13 03:33:14] -rw-r--r-- 1 boincer umatlas       105 Oct 13 01:37 job.xml
[2025-10-13 03:33:14] -rw-r--r-- 2 boincer umatlas 219903792 Oct 13 01:37 EVNT.46676267._004701.pool.root.1
[2025-10-13 03:33:14] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 01:37 start_atlas.sh
[2025-10-13 03:33:14] drwxrwx--x 2 boincer umatlas      4096 Oct 13 01:37 shared
[2025-10-13 03:33:14] -rw-r--r-- 2 boincer umatlas    569677 Oct 13 01:37 input.tar.gz
[2025-10-13 03:33:14] -rw-r--r-- 1 boincer umatlas         0 Oct 13 01:37 boinc_lockfile
[2025-10-13 03:33:14] -rw-r--r-- 1 boincer umatlas      2550 Oct 13 01:37 pandaJob.out
[2025-10-13 03:33:14] -rw------- 1 boincer umatlas    973230 Oct 13 01:37 agis_schedconf.cvmfs.json
[2025-10-13 03:33:14] -rw------- 1 boincer umatlas   1560580 Oct 13 01:37 agis_ddmendpoints.agis.ALL.json
[2025-10-13 03:33:14] drwx------ 5 boincer umatlas      4096 Oct 13 01:37 pilot3
[2025-10-13 03:33:14] -rw-r--r-- 1 boincer umatlas      5910 Oct 13 03:28 init_data.xml
[2025-10-13 03:33:14] -rw------- 1 boincer umatlas 196701282 Oct 13 03:31 HITS.46676269._093355.pool.root.1
[2025-10-13 03:33:14] -rw-r--r-- 1 boincer umatlas       530 Oct 13 03:31 boinc_task_state.xml
[2025-10-13 03:33:14] -rw------- 1 boincer umatlas      1050 Oct 13 03:31 memory_monitor_summary.json
[2025-10-13 03:33:14] -rw------- 1 boincer umatlas    347150 Oct 13 03:31 log.46676269._093355.job.log.tgz.1
[2025-10-13 03:33:14] -rw------- 1 boincer umatlas      7852 Oct 13 03:32 heartbeat.json
[2025-10-13 03:33:14] -rw------- 1 boincer umatlas        95 Oct 13 03:32 pilot_heartbeat.json
[2025-10-13 03:33:14] -rw-r--r-- 1 boincer umatlas      8192 Oct 13 03:32 boinc_mmap_file
[2025-10-13 03:33:14] -rw-r--r-- 1 boincer umatlas        27 Oct 13 03:32 wrapper_checkpoint.txt
[2025-10-13 03:33:14] -rw------- 1 boincer umatlas      4746 Oct 13 03:33 pilotlog.txt
[2025-10-13 03:33:14] -rw------- 1 boincer umatlas    971258 Oct 13 03:33 log.46676269._093355.job.log.1
[2025-10-13 03:33:14] -rw------- 1 boincer umatlas       357 Oct 13 03:33 output.list
[2025-10-13 03:33:14] -rw-r--r-- 1 boincer umatlas       620 Oct 13 03:33 runtime_log
[2025-10-13 03:33:14] -rw------- 1 boincer umatlas   1341440 Oct 13 03:33 result.tar.gz
[2025-10-13 03:33:14] -rw------- 1 boincer umatlas       659 Oct 13 03:33 vOAMDmUqLS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmEEmNDmHOB4cm.diag
[2025-10-13 03:33:14] -rw-r--r-- 1 boincer umatlas      8703 Oct 13 03:33 runtime_log.err
[2025-10-13 03:33:14] -rw-r--r-- 1 boincer umatlas     20872 Oct 13 03:33 stderr.txt
[2025-10-13 03:33:14] HITS file was successfully produced:
[2025-10-13 03:33:14] -rw------- 1 boincer umatlas 196701282 Oct 13 03:31 shared/HITS.pool.root.1
[2025-10-13 03:33:14]  *** Contents of shared directory: ***
[2025-10-13 03:33:14] total 408736
[2025-10-13 03:33:14] -rw-r--r-- 2 boincer umatlas 219903792 Oct 13 01:37 ATLAS.root_0
[2025-10-13 03:33:14] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 01:37 start_atlas.sh
[2025-10-13 03:33:14] -rw-r--r-- 2 boincer umatlas    569677 Oct 13 01:37 input.tar.gz
[2025-10-13 03:33:14] -rw------- 1 boincer umatlas 196701282 Oct 13 03:31 HITS.pool.root.1
[2025-10-13 03:33:14] -rw------- 1 boincer umatlas   1341440 Oct 13 03:33 result.tar.gz
03:33:15 (14255): run_atlas exited; CPU time 50103.149864
03:33:15 (14255): called boinc_finish(0)

</stderr_txt>
]]>

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