Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
01:55:03 (28002): wrapper (7.7.26015): starting
01:55:03 (28002): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 01:55:03] Arguments: --nthreads 8
[2025-10-13 01:55:03] Threads: 8
[2025-10-13 01:55:03] Checking for CVMFS
[2025-10-13 01:55:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 01:55:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 01:55:03] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 01:55:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 01:55:03] 2.11.2.0 2871 196780 90308 151650 1 56 12440183 20275200 1 130560 1 73569365 99.980 7959036 27321 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 01:55:03] CVMFS is ok
[2025-10-13 01:55:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 01:55:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 01:55:03] Further information can be found at the LHC@home message board.
[2025-10-13 01:55:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 01:55:03] Checking for apptainer binary...
[2025-10-13 01:55:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 01:55:03] Running /usr/bin/apptainer --version
[2025-10-13 01:55:03] apptainer version 1.3.2-1.el7
[2025-10-13 01:55:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 01:55:05] c-115-7.aglt2.org
[2025-10-13 01:55:05] apptainer works
[2025-10-13 01:55:05] Set ATHENA_PROC_NUMBER=8
[2025-10-13 01:55:05] Set ATHENA_CORE_NUMBER=8
[2025-10-13 01:55:05] Starting ATLAS job with PandaID=6841069720
[2025-10-13 01:55:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 03:51:40]  *** The last 200 lines of the pilot log: ***
[2025-10-13 03:51:40] 2025-10-13 07:50:33,828 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 03:51:40] 2025-10-13 07:50:33,829 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 03:51:40] 2025-10-13 07:50:33,829 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 03:51:40] 2025-10-13 07:50:33,829 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 03:51:40] 2025-10-13 07:50:33,831 | INFO     | fitting pss+swap vs Time
[2025-10-13 03:51:40] 2025-10-13 07:50:33,832 | INFO     | sum of square deviations: 447383272.0
[2025-10-13 03:51:40] 2025-10-13 07:50:33,832 | INFO     | sum of deviations: -370002698.0000002
[2025-10-13 03:51:40] 2025-10-13 07:50:33,832 | INFO     | mean x: 1760338369.0
[2025-10-13 03:51:40] 2025-10-13 07:50:33,833 | INFO     | mean y: 2563189.7168141594
[2025-10-13 03:51:40] 2025-10-13 07:50:33,833 | INFO     | -- intersect: 1458428857.2264385
[2025-10-13 03:51:40] 2025-10-13 07:50:33,833 | INFO     | intersect: 1458428857.2264385
[2025-10-13 03:51:40] 2025-10-13 07:50:33,833 | INFO     | chi2: 1.5942810354855088
[2025-10-13 03:51:40] 2025-10-13 07:50:33,833 | INFO     | sum of square deviations: 390582207.0
[2025-10-13 03:51:40] 2025-10-13 07:50:33,834 | INFO     | sum of deviations: 187532025.5000031
[2025-10-13 03:51:40] 2025-10-13 07:50:33,834 | INFO     | mean x: 1760338216.5
[2025-10-13 03:51:40] 2025-10-13 07:50:33,834 | INFO     | mean y: 2564687.5833333335
[2025-10-13 03:51:40] 2025-10-13 07:50:33,834 | INFO     | -- intersect: -842634569.8045177
[2025-10-13 03:51:40] 2025-10-13 07:50:33,834 | INFO     | intersect: -842634569.8045177
[2025-10-13 03:51:40] 2025-10-13 07:50:33,835 | INFO     | chi2: 1.596549887275299
[2025-10-13 03:51:40] 2025-10-13 07:50:33,835 | INFO     | current chi2=1.596549887275299 (change=-0.142311909838359 %)
[2025-10-13 03:51:40] 2025-10-13 07:50:33,835 | INFO     | right removable region: 107
[2025-10-13 03:51:40] 2025-10-13 07:50:33,835 | INFO     | sum of square deviations: 390582207.0
[2025-10-13 03:51:40] 2025-10-13 07:50:33,836 | INFO     | sum of deviations: -17171179414.5
[2025-10-13 03:51:40] 2025-10-13 07:50:33,836 | INFO     | mean x: 1760338521.5
[2025-10-13 03:51:40] 2025-10-13 07:50:33,836 | INFO     | mean y: 2607376.638888889
[2025-10-13 03:51:40] 2025-10-13 07:50:33,836 | INFO     | -- intersect: 77392432210.44696
[2025-10-13 03:51:40] 2025-10-13 07:50:33,836 | INFO     | intersect: 77392432210.44696
[2025-10-13 03:51:40] 2025-10-13 07:50:33,836 | INFO     | chi2: 0.13950699066743677
[2025-10-13 03:51:40] 2025-10-13 07:50:33,836 | INFO     | current chi2=0.13950699066743677 (change=91.24953583701429 %)
[2025-10-13 03:51:40] 2025-10-13 07:50:33,837 | INFO     | sum of square deviations: 338804492.0
[2025-10-13 03:51:40] 2025-10-13 07:50:33,837 | INFO     | sum of deviations: -18116337479.000008
[2025-10-13 03:51:40] 2025-10-13 07:50:33,837 | INFO     | mean x: 1760338674.0
[2025-10-13 03:51:40] 2025-10-13 07:50:33,837 | INFO     | mean y: 2610002.2718446604
[2025-10-13 03:51:40] 2025-10-13 07:50:33,837 | INFO     | -- intersect: 94130315651.22581
[2025-10-13 03:51:40] 2025-10-13 07:50:33,838 | INFO     | intersect: 94130315651.22581
[2025-10-13 03:51:40] 2025-10-13 07:50:33,838 | INFO     | chi2: 0.09550361621576686
[2025-10-13 03:51:40] 2025-10-13 07:50:33,838 | INFO     | current chi2=0.09550361621576686 (change=31.54205695438388 %)
[2025-10-13 03:51:40] 2025-10-13 07:50:33,838 | INFO     | sum of square deviations: 291817564.5
[2025-10-13 03:51:40] 2025-10-13 07:50:33,839 | INFO     | sum of deviations: -15694697899.5
[2025-10-13 03:51:40] 2025-10-13 07:50:33,839 | INFO     | mean x: 1760338826.5
[2025-10-13 03:51:40] 2025-10-13 07:50:33,839 | INFO     | mean y: 2602120.1530612246
[2025-10-13 03:51:40] 2025-10-13 07:50:33,839 | INFO     | -- intersect: 94678144115.08272
[2025-10-13 03:51:40] 2025-10-13 07:50:33,839 | INFO     | intersect: 94678144115.08272
[2025-10-13 03:51:40] 2025-10-13 07:50:33,839 | INFO     | chi2: 0.0953237947272316
[2025-10-13 03:51:40] 2025-10-13 07:50:33,839 | INFO     | current chi2=0.0953237947272316 (change=0.188287622668656 %)
[2025-10-13 03:51:40] 2025-10-13 07:50:33,839 | INFO     | left removable region: 30
[2025-10-13 03:51:40] 2025-10-13 07:50:33,840 | INFO     | sum of square deviations: 141539398.0
[2025-10-13 03:51:40] 2025-10-13 07:50:33,840 | INFO     | sum of deviations: -6407003362.0
[2025-10-13 03:51:40] 2025-10-13 07:50:33,840 | INFO     | mean x: 1760339101.0
[2025-10-13 03:51:40] 2025-10-13 07:50:33,840 | INFO     | mean y: 2569509.1428571427
[2025-10-13 03:51:40] 2025-10-13 07:50:33,840 | INFO     | -- intersect: 79687086313.19948
[2025-10-13 03:51:40] 2025-10-13 07:50:33,840 | INFO     | intersect: 79687086313.19948
[2025-10-13 03:51:40] 2025-10-13 07:50:33,841 | INFO     | chi2: 0.07650214515269989
[2025-10-13 03:51:40] 2025-10-13 07:50:33,841 | INFO     | -- intersect: 79687086313.19948
[2025-10-13 03:51:40] 2025-10-13 07:50:33,841 | INFO     | current memory leak: -45.27 B/s (using 77 data points, chi2=0.08)
[2025-10-13 03:51:40] 2025-10-13 07:50:33,841 | INFO     | could have reported an average CPU frequency of 2102 MHz (7 samples)
[2025-10-13 03:51:40] 2025-10-13 07:50:33,841 | INFO     | ..............................
[2025-10-13 03:51:40] 2025-10-13 07:50:33,841 | INFO     | . Timing measurements:
[2025-10-13 03:51:40] 2025-10-13 07:50:33,842 | INFO     | . get job = 0 s
[2025-10-13 03:51:40] 2025-10-13 07:50:33,842 | INFO     | . initial setup = 2 s
[2025-10-13 03:51:40] 2025-10-13 07:50:33,842 | INFO     | . payload setup = 8 s
[2025-10-13 03:51:40] 2025-10-13 07:50:33,842 | INFO     | . stage-in = 0 s
[2025-10-13 03:51:40] 2025-10-13 07:50:33,842 | INFO     | . payload execution = 6870 s
[2025-10-13 03:51:40] 2025-10-13 07:50:33,842 | INFO     | . stage-out = 0 s
[2025-10-13 03:51:40] 2025-10-13 07:50:33,842 | INFO     | . log creation = 0 s
[2025-10-13 03:51:40] 2025-10-13 07:50:33,842 | INFO     | ..............................
[2025-10-13 03:51:40] 2025-10-13 07:50:33,930 | INFO     | 
[2025-10-13 03:51:40] 2025-10-13 07:50:33,930 | INFO     | job summary report
[2025-10-13 03:51:40] 2025-10-13 07:50:33,931 | INFO     | --------------------------------------------------
[2025-10-13 03:51:40] 2025-10-13 07:50:33,931 | INFO     | PanDA job id: 6841069720
[2025-10-13 03:51:40] 2025-10-13 07:50:33,931 | INFO     | task id: 46676269
[2025-10-13 03:51:40] 2025-10-13 07:50:33,931 | INFO     | errors: (none)
[2025-10-13 03:51:40] 2025-10-13 07:50:33,931 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 03:51:40] 2025-10-13 07:50:33,931 | INFO     | pilot state: finished 
[2025-10-13 03:51:40] 2025-10-13 07:50:33,931 | INFO     | transexitcode: 0
[2025-10-13 03:51:40] 2025-10-13 07:50:33,931 | INFO     | exeerrorcode: 0
[2025-10-13 03:51:40] 2025-10-13 07:50:33,932 | INFO     | exeerrordiag: 
[2025-10-13 03:51:40] 2025-10-13 07:50:33,932 | INFO     | exitcode: 0
[2025-10-13 03:51:40] 2025-10-13 07:50:33,932 | INFO     | exitmsg: OK
[2025-10-13 03:51:40] 2025-10-13 07:50:33,932 | INFO     | cpuconsumptiontime: 50436 s
[2025-10-13 03:51:40] 2025-10-13 07:50:33,932 | INFO     | nevents: 400
[2025-10-13 03:51:40] 2025-10-13 07:50:33,932 | INFO     | neventsw: 0
[2025-10-13 03:51:40] 2025-10-13 07:50:33,932 | INFO     | pid: 5877
[2025-10-13 03:51:40] 2025-10-13 07:50:33,932 | INFO     | pgrp: 5877
[2025-10-13 03:51:40] 2025-10-13 07:50:33,932 | INFO     | corecount: 8
[2025-10-13 03:51:40] 2025-10-13 07:50:33,933 | INFO     | event service: False
[2025-10-13 03:51:40] 2025-10-13 07:50:33,933 | INFO     | sizes: {0: 2348806, 6: 2349068, 11: 2349096, 6882: 2376264, 6885: 2385262, 6887: 2385318, 6895: 2385640}
[2025-10-13 03:51:40] 2025-10-13 07:50:33,933 | INFO     | --------------------------------------------------
[2025-10-13 03:51:40] 2025-10-13 07:50:33,933 | INFO     | 
[2025-10-13 03:51:40] 2025-10-13 07:50:33,933 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 03:51:40] 2025-10-13 07:50:33,960 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 03:51:40] 2025-10-13 07:50:33,961 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 03:51:40] 2025-10-13 07:50:33,961 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 03:51:40] 2025-10-13 07:50:33,961 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 03:51:40] 2025-10-13 07:50:33,961 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 03:51:40] 2025-10-13 07:50:33,962 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 03:51:40] 2025-10-13 07:50:33,962 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 03:51:40] 2025-10-13 07:50:33,962 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 03:51:40] 2025-10-13 07:50:33,962 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 03:51:40] 2025-10-13 07:50:33,962 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 03:51:40] 2025-10-13 07:50:33,963 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 03:51:40] 2025-10-13 07:50:33,963 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 03:51:40] 2025-10-13 07:50:33,963 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 03:51:40] 2025-10-13 07:50:33,963 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 03:51:40] 2025-10-13 07:50:33,963 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 03:51:40] 2025-10-13 07:50:33,963 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 03:51:40] 2025-10-13 07:50:33,964 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 03:51:40] 2025-10-13 07:50:33,964 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 03:51:40] 2025-10-13 07:50:33,964 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 03:51:40] 2025-10-13 07:50:33,964 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 03:51:40] 2025-10-13 07:50:33,965 | INFO     | job 6841069720 has completed (purged errors)
[2025-10-13 03:51:40] 2025-10-13 07:50:33,965 | INFO     | overall cleanup function is called
[2025-10-13 03:51:40] 2025-10-13 07:50:34,972 | INFO     | --- collectZombieJob: --- 10, [5877]
[2025-10-13 03:51:40] 2025-10-13 07:50:34,973 | INFO     | zombie collector waiting for pid 5877
[2025-10-13 03:51:40] 2025-10-13 07:50:34,973 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 03:51:40] 2025-10-13 07:50:34,973 | INFO     | collected zombie processes
[2025-10-13 03:51:40] 2025-10-13 07:50:34,973 | INFO     | will attempt to kill all subprocesses of pid=5877
[2025-10-13 03:51:40] 2025-10-13 07:50:35,059 | INFO     | process IDs to be killed: [5877] (in reverse order)
[2025-10-13 03:51:40] 2025-10-13 07:50:35,112 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 03:51:40] 2025-10-13 07:50:35,112 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 03:51:40] 2025-10-13 07:50:35,117 | INFO     | did not find any defunct processes belonging to 5877
[2025-10-13 03:51:40] 2025-10-13 07:50:35,120 | INFO     | did not find any defunct processes belonging to 5877
[2025-10-13 03:51:40] 2025-10-13 07:50:35,120 | INFO     | ready for new job
[2025-10-13 03:51:40] 2025-10-13 07:50:35,121 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 03:51:40] 2025-10-13 07:50:35,122 | INFO     | ***************************************
[2025-10-13 03:51:40] 2025-10-13 07:50:35,122 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 03:51:40] 2025-10-13 07:50:35,122 | INFO     | ***************************************
[2025-10-13 03:51:40] 2025-10-13 07:50:35,123 | INFO     | 
[2025-10-13 03:51:40] 2025-10-13 07:50:35,123 | INFO     | architecture information:
[2025-10-13 03:51:40] 2025-10-13 07:50:35,124 | INFO     | executing command: cat /etc/os-release
[2025-10-13 03:51:40] 2025-10-13 07:50:35,142 | INFO     | cat /etc/os-release:
[2025-10-13 03:51:40] NAME="CentOS Linux"
[2025-10-13 03:51:40] VERSION="7 (Core)"
[2025-10-13 03:51:40] ID="centos"
[2025-10-13 03:51:40] ID_LIKE="rhel fedora"
[2025-10-13 03:51:40] VERSION_ID="7"
[2025-10-13 03:51:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 03:51:40] ANSI_COLOR="0;31"
[2025-10-13 03:51:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 03:51:40] HOME_URL="https://www.centos.org/"
[2025-10-13 03:51:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 03:51:40] 
[2025-10-13 03:51:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 03:51:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 03:51:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 03:51:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 03:51:40] 
[2025-10-13 03:51:40] 2025-10-13 07:50:35,142 | INFO     | ***************************************
[2025-10-13 03:51:40] 2025-10-13 07:50:35,645 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 03:51:40] 2025-10-13 07:50:35,665 | INFO     | sufficient remaining disk space (18584961024 B)
[2025-10-13 03:51:40] 2025-10-13 07:50:35,665 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 03:51:40] 2025-10-13 07:50:35,666 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 03:51:40] 2025-10-13 07:50:35,666 | INFO     | update_server=False
[2025-10-13 03:51:40] 2025-10-13 07:50:35,666 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 03:51:40] 2025-10-13 07:50:35,666 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 03:51:40] 2025-10-13 07:50:36,124 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 03:51:40] 2025-10-13 07:50:36,205 | INFO     | all data control threads have been joined
[2025-10-13 03:51:40] 2025-10-13 07:50:36,419 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 03:51:40] 2025-10-13 07:50:36,420 | INFO     | aborting loop
[2025-10-13 03:51:40] 2025-10-13 07:50:36,503 | INFO     | all job control threads have been joined
[2025-10-13 03:51:40] 2025-10-13 07:50:36,516 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 03:51:40] 2025-10-13 07:50:36,584 | INFO     | all payload control threads have been joined
[2025-10-13 03:51:40] 2025-10-13 07:50:36,670 | INFO     | [job] retrieve thread has finished
[2025-10-13 03:51:40] 2025-10-13 07:50:36,672 | INFO     | [job] queue monitor thread has finished
[2025-10-13 03:51:40] 2025-10-13 07:50:36,921 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 03:51:40] 2025-10-13 07:50:37,211 | INFO     | [data] control thread has finished
[2025-10-13 03:51:40] 2025-10-13 07:50:37,212 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 03:51:40] 2025-10-13 07:50:37,424 | INFO     | [job] job monitor thread has finished
[2025-10-13 03:51:40] 2025-10-13 07:50:37,440 | INFO     | [job] validate thread has finished
[2025-10-13 03:51:40] 2025-10-13 07:50:37,453 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 03:51:40] 2025-10-13 07:50:37,457 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 03:51:40] 2025-10-13 07:50:37,460 | INFO     | [data] copytool_in thread has finished
[2025-10-13 03:51:40] 2025-10-13 07:50:37,508 | INFO     | [job] control thread has finished
[2025-10-13 03:51:40] 2025-10-13 07:50:37,559 | INFO     | [payload] failed_post thread has finished
[2025-10-13 03:51:40] 2025-10-13 07:50:37,585 | INFO     | [payload] control thread has finished
[2025-10-13 03:51:40] 2025-10-13 07:50:38,118 | INFO     | [payload] validate_post thread has finished
[2025-10-13 03:51:40] 2025-10-13 07:50:38,519 | INFO     | [data] copytool_out thread has finished
[2025-10-13 03:51:40] 2025-10-13 07:50:40,128 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 03:51:40] 2025-10-13 07:51:05,258 | INFO     | PID=31671 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-13 03:51:40] 2025-10-13 07:51:05,259 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 03:51:40] 2025-10-13 07:51:05,259 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 03:51:40] 2025-10-13 07:51:05,259 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 03:51:40] 2025-10-13 07:51:32,928 | INFO     | [monitor] cgroup control has ended
[2025-10-13 03:51:40] 2025-10-13 07:51:34,677 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139984774522688)>', '<ExcThread(monitor, started 139983587374848)>']
[2025-10-13 03:51:40] 2025-10-13 07:51:35,386 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 03:51:40] 2025-10-13 07:51:35,386 | INFO     | [monitor] control thread has ended
[2025-10-13 03:51:40] 2025-10-13 07:51:39,684 | INFO     | all workflow threads have been joined
[2025-10-13 03:51:40] 2025-10-13 07:51:39,685 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 03:51:40] 2025-10-13 07:51:39,685 | INFO     | traces error code: 0
[2025-10-13 03:51:40] 2025-10-13 07:51:39,685 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 03:51:40] 2025-10-13 07:51:39,803 [wrapper] ==== pilot stdout END ====
[2025-10-13 03:51:40] 2025-10-13 07:51:39,808 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 03:51:40] 2025-10-13 07:51:39,812 [wrapper] pilotpid: 31671
[2025-10-13 03:51:40] 2025-10-13 07:51:39,816 [wrapper] Pilot exit status: 0
[2025-10-13 03:51:40] 2025-10-13 07:51:39,833 [wrapper] pandaids: 6841069720
[2025-10-13 03:51:40] 2025-10-13 07:51:39,884 [wrapper] cleanup supervisor_pilot 16295 31672
[2025-10-13 03:51:40] 2025-10-13 07:51:39,889 [wrapper] Test setup, not cleaning
[2025-10-13 03:51:40] 2025-10-13 07:51:39,894 [wrapper] apfmon messages muted
[2025-10-13 03:51:40] 2025-10-13 07:51:39,898 [wrapper] ==== wrapper stdout END ====
[2025-10-13 03:51:40] 2025-10-13 07:51:39,902 [wrapper] ==== wrapper stderr END ====
[2025-10-13 03:51:40]  *** Error codes and diagnostics ***
[2025-10-13 03:51:40]     "exeErrorCode": 0,
[2025-10-13 03:51:40]     "exeErrorDiag": "",
[2025-10-13 03:51:40]     "pilotErrorCode": 0,
[2025-10-13 03:51:40]     "pilotErrorDiag": "",
[2025-10-13 03:51:40]  *** Listing of results directory ***
[2025-10-13 03:51:40] total 414904
[2025-10-13 03:51:40] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 20:48 pilot3.tar.gz
[2025-10-13 03:51:40] -rwx------ 1 boincer umatlas     36292 Oct 12 21:03 runpilot2-wrapper.sh
[2025-10-13 03:51:40] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 21:03 queuedata.json
[2025-10-13 03:51:40] -rw-r--r-- 1 boincer umatlas       100 Oct 13 01:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 03:51:40] -rwxr-xr-x 1 boincer umatlas      7986 Oct 13 01:55 run_atlas
[2025-10-13 03:51:40] -rw-r--r-- 1 boincer umatlas       105 Oct 13 01:55 job.xml
[2025-10-13 03:51:40] -rw-r--r-- 2 boincer umatlas 219446352 Oct 13 01:55 EVNT.46676267._004717.pool.root.1
[2025-10-13 03:51:40] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 01:55 start_atlas.sh
[2025-10-13 03:51:40] drwxrwx--x 2 boincer umatlas      4096 Oct 13 01:55 shared
[2025-10-13 03:51:40] -rw-r--r-- 2 boincer umatlas    569678 Oct 13 01:55 input.tar.gz
[2025-10-13 03:51:40] -rw-r--r-- 1 boincer umatlas         0 Oct 13 01:55 boinc_lockfile
[2025-10-13 03:51:40] -rw-r--r-- 1 boincer umatlas      2549 Oct 13 01:55 pandaJob.out
[2025-10-13 03:51:40] -rw------- 1 boincer umatlas    973230 Oct 13 01:55 agis_schedconf.cvmfs.json
[2025-10-13 03:51:40] -rw------- 1 boincer umatlas   1560580 Oct 13 01:55 agis_ddmendpoints.agis.ALL.json
[2025-10-13 03:51:40] drwx------ 5 boincer umatlas      4096 Oct 13 01:55 pilot3
[2025-10-13 03:51:40] -rw-r--r-- 1 boincer umatlas      5908 Oct 13 03:49 init_data.xml
[2025-10-13 03:51:40] -rw------- 1 boincer umatlas 198858535 Oct 13 03:49 HITS.46676269._093760.pool.root.1
[2025-10-13 03:51:40] -rw-r--r-- 1 boincer umatlas       530 Oct 13 03:50 boinc_task_state.xml
[2025-10-13 03:51:40] -rw------- 1 boincer umatlas      1051 Oct 13 03:50 memory_monitor_summary.json
[2025-10-13 03:51:40] -rw------- 1 boincer umatlas    355595 Oct 13 03:50 log.46676269._093760.job.log.tgz.1
[2025-10-13 03:51:40] -rw------- 1 boincer umatlas      7849 Oct 13 03:50 heartbeat.json
[2025-10-13 03:51:40] -rw------- 1 boincer umatlas        95 Oct 13 03:51 pilot_heartbeat.json
[2025-10-13 03:51:40] -rw-r--r-- 1 boincer umatlas      8192 Oct 13 03:51 boinc_mmap_file
[2025-10-13 03:51:40] -rw-r--r-- 1 boincer umatlas        27 Oct 13 03:51 wrapper_checkpoint.txt
[2025-10-13 03:51:40] -rw------- 1 boincer umatlas      4746 Oct 13 03:51 pilotlog.txt
[2025-10-13 03:51:40] -rw------- 1 boincer umatlas    975035 Oct 13 03:51 log.46676269._093760.job.log.1
[2025-10-13 03:51:40] -rw------- 1 boincer umatlas       357 Oct 13 03:51 output.list
[2025-10-13 03:51:40] -rw-r--r-- 1 boincer umatlas       620 Oct 13 03:51 runtime_log
[2025-10-13 03:51:40] -rw------- 1 boincer umatlas   1351680 Oct 13 03:51 result.tar.gz
[2025-10-13 03:51:40] -rw-r--r-- 1 boincer umatlas      8698 Oct 13 03:51 runtime_log.err
[2025-10-13 03:51:40] -rw------- 1 boincer umatlas       657 Oct 13 03:51 2dXKDmm9LS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmDJmNDm9SwQmm.diag
[2025-10-13 03:51:40] -rw-r--r-- 1 boincer umatlas     20844 Oct 13 03:51 stderr.txt
[2025-10-13 03:51:40] HITS file was successfully produced:
[2025-10-13 03:51:40] -rw------- 1 boincer umatlas 198858535 Oct 13 03:49 shared/HITS.pool.root.1
[2025-10-13 03:51:40]  *** Contents of shared directory: ***
[2025-10-13 03:51:40] total 410400
[2025-10-13 03:51:40] -rw-r--r-- 2 boincer umatlas 219446352 Oct 13 01:55 ATLAS.root_0
[2025-10-13 03:51:40] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 01:55 start_atlas.sh
[2025-10-13 03:51:40] -rw-r--r-- 2 boincer umatlas    569678 Oct 13 01:55 input.tar.gz
[2025-10-13 03:51:40] -rw------- 1 boincer umatlas 198858535 Oct 13 03:49 HITS.pool.root.1
[2025-10-13 03:51:40] -rw------- 1 boincer umatlas   1351680 Oct 13 03:51 result.tar.gz
03:51:41 (28002): run_atlas exited; CPU time 50414.081136
03:51:41 (28002): called boinc_finish(0)

</stderr_txt>
]]>

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