Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
17:28:53 (159853): wrapper (7.7.26015): starting
17:28:53 (159853): wrapper: running run_atlas (--nthreads 3)
[2025-10-13 17:28:53] Arguments: --nthreads 3
[2025-10-13 17:28:53] Threads: 3
[2025-10-13 17:28:53] Checking for CVMFS
[2025-10-13 17:28:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 17:28:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 17:28:53] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 17:28:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 17:28:54] 2.9.2.0 2646070 6028 70948 151666 3 57 29141945 36864001 0 130560 0 4472092 99.991 205278 893 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 17:28:54] CVMFS is ok
[2025-10-13 17:28:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 17:28:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 17:28:54] Further information can be found at the LHC@home message board.
[2025-10-13 17:28:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 17:28:54] Checking for apptainer binary...
[2025-10-13 17:28:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 17:28:54] Running /usr/bin/apptainer --version
[2025-10-13 17:28:54] apptainer version 1.4.1-1.1
[2025-10-13 17:28:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 17:28:54] cosA133a
[2025-10-13 17:28:54] apptainer works
[2025-10-13 17:28:54] Set ATHENA_PROC_NUMBER=3
[2025-10-13 17:28:54] Set ATHENA_CORE_NUMBER=3
[2025-10-13 17:28:54] Starting ATLAS job with PandaID=6830226547
[2025-10-13 17:28:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 18:49:40]  *** The last 200 lines of the pilot log: ***
[2025-10-13 18:49:40]  workdir=None
[2025-10-13 18:49:40] ]
[2025-10-13 18:49:40] 2025-10-13 16:48:13,015 | INFO     | transferring file log.46376905._067138.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6830226547/log.46376905._067138.job.log.tgz.1 to /local/data/boinc/
[2025-10-13 18:49:40] 2025-10-13 16:48:13,015 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6830226547/log.46376905._067138.job.log.tgz.1 /local/data/boinc/slots/0/log.46376905._0671
[2025-10-13 18:49:40] 2025-10-13 16:48:13,027 | INFO     | adding to output.list: log.46376905._067138.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d4/67/log.46376905._067138.job.log.tg
[2025-10-13 18:49:40] 2025-10-13 16:48:13,027 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 18:49:40] 2025-10-13 16:48:13,028 | INFO     | summary of transferred files:
[2025-10-13 18:49:40] 2025-10-13 16:48:13,028 | INFO     |  -- lfn=log.46376905._067138.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 18:49:40] 2025-10-13 16:48:13,028 | INFO     | stage-out finished correctly
[2025-10-13 18:49:40] 2025-10-13 16:48:13,074 | INFO     | monitor loop #366: job 0:6830226547 is in state 'finished'
[2025-10-13 18:49:40] 2025-10-13 16:48:13,074 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 18:49:40] 2025-10-13 16:48:14,137 | INFO     | time since job start (4747s) is within the limit (172800.0s)
[2025-10-13 18:49:40] 2025-10-13 16:48:14,895 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 18:49:40] 2025-10-13 16:48:15,503 | INFO     | job 6830226547 has state=finished
[2025-10-13 18:49:40] 2025-10-13 16:48:15,503 | INFO     | preparing for final server update for job 6830226547 in state='finished'
[2025-10-13 18:49:40] 2025-10-13 16:48:15,504 | INFO     | this job has now completed (state=finished)
[2025-10-13 18:49:40] 2025-10-13 16:48:15,504 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 18:49:40] 2025-10-13 16:48:15,505 | INFO     | log transfer has been attempted: DONE
[2025-10-13 18:49:40] 2025-10-13 16:48:15,505 | INFO     | job 6830226547 has finished - writing final server update
[2025-10-13 18:49:40] 2025-10-13 16:48:15,505 | INFO     | total number of processed events: 400 (read)
[2025-10-13 18:49:40] 2025-10-13 16:48:15,507 | INFO     | executing command: lscpu
[2025-10-13 18:49:40] 2025-10-13 16:48:15,523 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 18:49:40] 2025-10-13 16:48:15,578 | INFO     | monitor loop #367: job 0:6830226547 is in state 'finished'
[2025-10-13 18:49:40] 2025-10-13 16:48:15,578 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 18:49:40] 2025-10-13 16:48:16,143 | INFO     | time since job start (4749s) is within the limit (172800.0s)
[2025-10-13 18:49:40] 2025-10-13 16:48:18,083 | INFO     | monitor loop #368: job 0:6830226547 is in state 'finished'
[2025-10-13 18:49:40] 2025-10-13 16:48:18,084 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 18:49:40] 2025-10-13 16:48:18,149 | INFO     | time since job start (4751s) is within the limit (172800.0s)
[2025-10-13 18:49:40] 2025-10-13 16:48:19,270 | INFO     | PID=163580 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-13 18:49:40] 2025-10-13 16:48:20,270 | INFO     | time since job start (4753s) is within the limit (172800.0s)
[2025-10-13 18:49:40] 2025-10-13 16:48:20,587 | INFO     | monitor loop #369: job 0:6830226547 is in state 'finished'
[2025-10-13 18:49:40] 2025-10-13 16:48:20,587 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 18:49:40] 2025-10-13 16:48:22,276 | INFO     | time since job start (4755s) is within the limit (172800.0s)
[2025-10-13 18:49:40] 2025-10-13 16:48:23,090 | INFO     | monitor loop #370: job 0:6830226547 is in state 'finished'
[2025-10-13 18:49:40] 2025-10-13 16:48:23,091 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 18:49:40] 2025-10-13 16:48:23,491 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 18:49:40] 2025-10-13 16:48:23,492 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 4366.558749999999
[2025-10-13 18:49:40] 2025-10-13 16:48:23,493 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6830226547/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 18:49:40] 2025-10-13 16:48:23,493 | INFO     | extracted standard info from prmon json
[2025-10-13 18:49:40] 2025-10-13 16:48:23,493 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 18:49:40] 2025-10-13 16:48:23,493 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 18:49:40] 2025-10-13 16:48:23,493 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 18:49:40] 2025-10-13 16:48:23,493 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 18:49:40] 2025-10-13 16:48:23,494 | INFO     | fitting pss+swap vs Time
[2025-10-13 18:49:40] 2025-10-13 16:48:23,494 | INFO     | sum of square deviations: 110960220.0
[2025-10-13 18:49:40] 2025-10-13 16:48:23,494 | INFO     | sum of deviations: -10659277188.999998
[2025-10-13 18:49:40] 2025-10-13 16:48:23,494 | INFO     | mean x: 1760371812.0
[2025-10-13 18:49:40] 2025-10-13 16:48:23,494 | INFO     | mean y: 2497618.563380282
[2025-10-13 18:49:40] 2025-10-13 16:48:23,494 | INFO     | -- intersect: 169110769932.82333
[2025-10-13 18:49:40] 2025-10-13 16:48:23,494 | INFO     | intersect: 169110769932.82333
[2025-10-13 18:49:40] 2025-10-13 16:48:23,494 | INFO     | chi2: 0.07235850431932736
[2025-10-13 18:49:40] 2025-10-13 16:48:23,495 | INFO     | -- intersect: 169110769932.82333
[2025-10-13 18:49:40] 2025-10-13 16:48:23,495 | INFO     | current memory leak: -96.06 B/s (using 71 data points, chi2=0.07)
[2025-10-13 18:49:40] 2025-10-13 16:48:23,495 | INFO     | could have reported an average CPU frequency of 4321 MHz (6 samples)
[2025-10-13 18:49:40] 2025-10-13 16:48:23,495 | INFO     | ..............................
[2025-10-13 18:49:40] 2025-10-13 16:48:23,495 | INFO     | . Timing measurements:
[2025-10-13 18:49:40] 2025-10-13 16:48:23,495 | INFO     | . get job = 0 s
[2025-10-13 18:49:40] 2025-10-13 16:48:23,495 | INFO     | . initial setup = 1 s
[2025-10-13 18:49:40] 2025-10-13 16:48:23,495 | INFO     | . payload setup = 6 s
[2025-10-13 18:49:40] 2025-10-13 16:48:23,495 | INFO     | . stage-in = 0 s
[2025-10-13 18:49:40] 2025-10-13 16:48:23,495 | INFO     | . payload execution = 4719 s
[2025-10-13 18:49:40] 2025-10-13 16:48:23,495 | INFO     | . stage-out = 0 s
[2025-10-13 18:49:40] 2025-10-13 16:48:23,495 | INFO     | . log creation = 0 s
[2025-10-13 18:49:40] 2025-10-13 16:48:23,495 | INFO     | ..............................
[2025-10-13 18:49:40] 2025-10-13 16:48:23,693 | INFO     | 
[2025-10-13 18:49:40] 2025-10-13 16:48:23,693 | INFO     | job summary report
[2025-10-13 18:49:40] 2025-10-13 16:48:23,693 | INFO     | --------------------------------------------------
[2025-10-13 18:49:40] 2025-10-13 16:48:23,693 | INFO     | PanDA job id: 6830226547
[2025-10-13 18:49:40] 2025-10-13 16:48:23,693 | INFO     | task id: 46376905
[2025-10-13 18:49:40] 2025-10-13 16:48:23,694 | INFO     | errors: (none)
[2025-10-13 18:49:40] 2025-10-13 16:48:23,694 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 18:49:40] 2025-10-13 16:48:23,694 | INFO     | pilot state: finished 
[2025-10-13 18:49:40] 2025-10-13 16:48:23,694 | INFO     | transexitcode: 0
[2025-10-13 18:49:40] 2025-10-13 16:48:23,694 | INFO     | exeerrorcode: 0
[2025-10-13 18:49:40] 2025-10-13 16:48:23,694 | INFO     | exeerrordiag: 
[2025-10-13 18:49:40] 2025-10-13 16:48:23,694 | INFO     | exitcode: 0
[2025-10-13 18:49:40] 2025-10-13 16:48:23,695 | INFO     | exitmsg: OK
[2025-10-13 18:49:40] 2025-10-13 16:48:23,695 | INFO     | cpuconsumptiontime: 13516 s
[2025-10-13 18:49:40] 2025-10-13 16:48:23,695 | INFO     | nevents: 400
[2025-10-13 18:49:40] 2025-10-13 16:48:23,695 | INFO     | neventsw: 0
[2025-10-13 18:49:40] 2025-10-13 16:48:23,695 | INFO     | pid: 170028
[2025-10-13 18:49:40] 2025-10-13 16:48:23,695 | INFO     | pgrp: 170028
[2025-10-13 18:49:40] 2025-10-13 16:48:23,695 | INFO     | corecount: 3
[2025-10-13 18:49:40] 2025-10-13 16:48:23,695 | INFO     | event service: False
[2025-10-13 18:49:40] 2025-10-13 16:48:23,696 | INFO     | sizes: {0: 2348768, 4: 2349030, 10: 2349058, 4729: 2375356, 4730: 2384360, 4731: 2384416, 4740: 2384738}
[2025-10-13 18:49:40] 2025-10-13 16:48:23,696 | INFO     | --------------------------------------------------
[2025-10-13 18:49:40] 2025-10-13 16:48:23,696 | INFO     | 
[2025-10-13 18:49:40] 2025-10-13 16:48:23,696 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-10-13 18:49:40] 2025-10-13 16:48:23,709 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 18:49:40] 2025-10-13 16:48:23,709 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 18:49:40] 2025-10-13 16:48:23,709 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 18:49:40] 2025-10-13 16:48:23,709 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 18:49:40] 2025-10-13 16:48:23,709 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 18:49:40] 2025-10-13 16:48:23,709 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 18:49:40] 2025-10-13 16:48:23,709 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 18:49:40] 2025-10-13 16:48:23,709 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 18:49:40] 2025-10-13 16:48:23,709 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 18:49:40] 2025-10-13 16:48:23,709 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 18:49:40] 2025-10-13 16:48:23,709 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 18:49:40] 2025-10-13 16:48:23,709 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 18:49:40] 2025-10-13 16:48:23,709 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 18:49:40] 2025-10-13 16:48:23,709 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 18:49:40] 2025-10-13 16:48:23,709 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 18:49:40] 2025-10-13 16:48:23,710 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 18:49:40] 2025-10-13 16:48:23,710 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 18:49:40] 2025-10-13 16:48:23,710 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 18:49:40] 2025-10-13 16:48:23,710 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 18:49:40] 2025-10-13 16:48:23,710 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 18:49:40] 2025-10-13 16:48:23,710 | INFO     | job 6830226547 has completed (purged errors)
[2025-10-13 18:49:40] 2025-10-13 16:48:23,710 | INFO     | overall cleanup function is called
[2025-10-13 18:49:40] 2025-10-13 16:48:24,716 | INFO     | --- collectZombieJob: --- 10, [170028]
[2025-10-13 18:49:40] 2025-10-13 16:48:24,717 | INFO     | zombie collector waiting for pid 170028
[2025-10-13 18:49:40] 2025-10-13 16:48:24,717 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 18:49:40] 2025-10-13 16:48:24,717 | INFO     | collected zombie processes
[2025-10-13 18:49:40] 2025-10-13 16:48:24,717 | INFO     | will attempt to kill all subprocesses of pid=170028
[2025-10-13 18:49:40] 2025-10-13 16:48:24,755 | INFO     | process IDs to be killed: [170028] (in reverse order)
[2025-10-13 18:49:40] 2025-10-13 16:48:24,780 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 18:49:40] 2025-10-13 16:48:24,780 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 18:49:40] 2025-10-13 16:48:24,782 | INFO     | did not find any defunct processes belonging to 170028
[2025-10-13 18:49:40] 2025-10-13 16:48:24,782 | INFO     | did not find any defunct processes belonging to 170028
[2025-10-13 18:49:40] 2025-10-13 16:48:24,783 | INFO     | ready for new job
[2025-10-13 18:49:40] 2025-10-13 16:48:24,783 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 18:49:40] 2025-10-13 16:48:24,783 | INFO     | ***************************************
[2025-10-13 18:49:40] 2025-10-13 16:48:24,783 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-13 18:49:40] 2025-10-13 16:48:24,783 | INFO     | ***************************************
[2025-10-13 18:49:40] 2025-10-13 16:48:24,783 | INFO     | 
[2025-10-13 18:49:40] 2025-10-13 16:48:24,784 | INFO     | architecture information:
[2025-10-13 18:49:40] 2025-10-13 16:48:24,784 | INFO     | executing command: cat /etc/os-release
[2025-10-13 18:49:40] 2025-10-13 16:48:24,793 | INFO     | cat /etc/os-release:
[2025-10-13 18:49:40] NAME="CentOS Linux"
[2025-10-13 18:49:40] VERSION="7 (Core)"
[2025-10-13 18:49:40] ID="centos"
[2025-10-13 18:49:40] ID_LIKE="rhel fedora"
[2025-10-13 18:49:40] VERSION_ID="7"
[2025-10-13 18:49:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 18:49:40] ANSI_COLOR="0;31"
[2025-10-13 18:49:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 18:49:40] HOME_URL="https://www.centos.org/"
[2025-10-13 18:49:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 18:49:40] 
[2025-10-13 18:49:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 18:49:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 18:49:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 18:49:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 18:49:40] 
[2025-10-13 18:49:40] 2025-10-13 16:48:24,794 | INFO     | ***************************************
[2025-10-13 18:49:40] 2025-10-13 16:48:25,297 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-13 18:49:40] 2025-10-13 16:48:25,310 | INFO     | sufficient remaining disk space (331811389440 B)
[2025-10-13 18:49:40] 2025-10-13 16:48:25,310 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 18:49:40] 2025-10-13 16:48:25,311 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 18:49:40] 2025-10-13 16:48:25,311 | INFO     | update_server=False
[2025-10-13 18:49:40] 2025-10-13 16:48:25,311 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 18:49:40] 2025-10-13 16:48:25,311 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 18:49:40] 2025-10-13 16:48:25,436 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 18:49:40] 2025-10-13 16:48:25,595 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 18:49:40] 2025-10-13 16:48:25,595 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 18:49:40] 2025-10-13 16:48:25,595 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 18:49:40] 2025-10-13 16:48:25,595 | INFO     | will abort loop
[2025-10-13 18:49:40] 2025-10-13 16:48:25,805 | INFO     | all payload control threads have been joined
[2025-10-13 18:49:40] 2025-10-13 16:48:26,076 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 18:49:40] 2025-10-13 16:48:26,085 | INFO     | all data control threads have been joined
[2025-10-13 18:49:40] 2025-10-13 16:48:26,316 | INFO     | [job] retrieve thread has finished
[2025-10-13 18:49:40] 2025-10-13 16:48:26,317 | INFO     | [job] queue monitor thread has finished
[2025-10-13 18:49:40] 2025-10-13 16:48:26,381 | INFO     | [data] copytool_in thread has finished
[2025-10-13 18:49:40] 2025-10-13 16:48:26,392 | INFO     | [job] validate thread has finished
[2025-10-13 18:49:40] 2025-10-13 16:48:26,596 | INFO     | all job control threads have been joined
[2025-10-13 18:49:40] 2025-10-13 16:48:26,601 | INFO     | [job] job monitor thread has finished
[2025-10-13 18:49:40] 2025-10-13 16:48:26,661 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 18:49:40] 2025-10-13 16:48:26,708 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 18:49:40] 2025-10-13 16:48:26,736 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 18:49:40] 2025-10-13 16:48:26,811 | INFO     | [payload] control thread has finished
[2025-10-13 18:49:40] 2025-10-13 16:48:27,036 | INFO     | [payload] failed_post thread has finished
[2025-10-13 18:49:40] 2025-10-13 16:48:27,084 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 18:49:40] 2025-10-13 16:48:27,090 | INFO     | [data] control thread has finished
[2025-10-13 18:49:40] 2025-10-13 16:48:27,602 | INFO     | [job] control thread has finished
[2025-10-13 18:49:40] 2025-10-13 16:48:27,641 | INFO     | [payload] validate_post thread has finished
[2025-10-13 18:49:40] 2025-10-13 16:48:28,083 | INFO     | [data] copytool_out thread has finished
[2025-10-13 18:49:40] 2025-10-13 16:48:29,443 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 18:49:40] 2025-10-13 16:48:55,393 | INFO     | PID=163580 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-13 18:49:40] 2025-10-13 16:48:55,394 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 18:49:40] 2025-10-13 16:48:55,394 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 18:49:40] 2025-10-13 16:48:55,394 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 18:49:40] 2025-10-13 16:49:13,128 | INFO     | [monitor] cgroup control has ended
[2025-10-13 18:49:40] 2025-10-13 16:49:14,102 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140665628653376)>', '<ExcThread(monitor, started 140664985601792)>']
[2025-10-13 18:49:40] 2025-10-13 16:49:14,495 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 18:49:40] 2025-10-13 16:49:14,495 | INFO     | [monitor] control thread has ended
[2025-10-13 18:49:40] 2025-10-13 16:49:19,128 | INFO     | all workflow threads have been joined
[2025-10-13 18:49:40] 2025-10-13 16:49:19,128 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 18:49:40] 2025-10-13 16:49:19,129 | INFO     | traces error code: 0
[2025-10-13 18:49:40] 2025-10-13 16:49:19,129 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 18:49:40] 2025-10-13 16:49:19,175 [wrapper] ==== pilot stdout END ====
[2025-10-13 18:49:40] 2025-10-13 16:49:19,178 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 18:49:40] 2025-10-13 16:49:19,181 [wrapper] pilotpid: 163580
[2025-10-13 18:49:40] 2025-10-13 16:49:19,184 [wrapper] Pilot exit status: 0
[2025-10-13 18:49:40] 2025-10-13 16:49:19,191 [wrapper] pandaids: 6830226547
[2025-10-13 18:49:40] 2025-10-13 16:49:19,208 [wrapper] cleanup supervisor_pilot  182306 163581
[2025-10-13 18:49:40] 2025-10-13 16:49:19,211 [wrapper] Test setup, not cleaning
[2025-10-13 18:49:40] 2025-10-13 16:49:19,214 [wrapper] apfmon messages muted
[2025-10-13 18:49:40] 2025-10-13 16:49:19,216 [wrapper] ==== wrapper stdout END ====
[2025-10-13 18:49:40] 2025-10-13 16:49:19,219 [wrapper] ==== wrapper stderr END ====
[2025-10-13 18:49:40]  *** Error codes and diagnostics ***
[2025-10-13 18:49:40]     "exeErrorCode": 0,
[2025-10-13 18:49:40]     "exeErrorDiag": "",
[2025-10-13 18:49:40]     "pilotErrorCode": 0,
[2025-10-13 18:49:40]     "pilotErrorDiag": "",
[2025-10-13 18:49:40]  *** Listing of results directory ***
[2025-10-13 18:49:40] total 388840
[2025-10-13 18:49:40] -rw-r--r-- 1 boinc boinc    552446 Oct  4 22:24 pilot3.tar.gz
[2025-10-13 18:49:40] -rwx------ 1 boinc boinc     36292 Oct  4 22:25 runpilot2-wrapper.sh
[2025-10-13 18:49:40] -rw-r--r-- 1 boinc boinc      5112 Oct  4 22:25 queuedata.json
[2025-10-13 18:49:40] -rw-r--r-- 1 boinc boinc       100 Oct 13 17:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 18:49:40] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 17:28 run_atlas
[2025-10-13 18:49:40] -rw-r--r-- 1 boinc boinc       105 Oct 13 17:28 job.xml
[2025-10-13 18:49:40] -rw-r--r-- 2 boinc boinc 216027905 Oct 13 17:28 EVNT.46376901._002433.pool.root.1
[2025-10-13 18:49:40] -rw-r--r-- 2 boinc boinc    565601 Oct 13 17:28 input.tar.gz
[2025-10-13 18:49:40] -rw-r--r-- 2 boinc boinc     15120 Oct 13 17:28 start_atlas.sh
[2025-10-13 18:49:40] drwxrwx--x 2 boinc boinc      4096 Oct 13 17:28 shared
[2025-10-13 18:49:40] -rw-r--r-- 1 boinc boinc         0 Oct 13 17:28 boinc_setup_complete
[2025-10-13 18:49:40] -rw-r--r-- 1 boinc boinc      6200 Oct 13 17:28 init_data.xml
[2025-10-13 18:49:40] -rw-r--r-- 1 boinc boinc         0 Oct 13 17:28 boinc_lockfile
[2025-10-13 18:49:40] -rw-r--r-- 1 boinc boinc      2518 Oct 13 17:28 pandaJob.out
[2025-10-13 18:49:40] -rw------- 1 boinc boinc    972783 Oct 13 17:29 agis_schedconf.cvmfs.json
[2025-10-13 18:49:40] -rw------- 1 boinc boinc   1560580 Oct 13 17:29 agis_ddmendpoints.agis.ALL.json
[2025-10-13 18:49:40] drwx------ 4 boinc boinc      4096 Oct 13 17:29 pilot3
[2025-10-13 18:49:40] -rw-r--r-- 1 boinc boinc       529 Oct 13 18:47 boinc_task_state.xml
[2025-10-13 18:49:40] -rw------- 1 boinc boinc 176365887 Oct 13 18:47 HITS.46376905._067138.pool.root.1
[2025-10-13 18:49:40] -rw------- 1 boinc boinc      1026 Oct 13 18:48 memory_monitor_summary.json
[2025-10-13 18:49:40] -rw------- 1 boinc boinc    243935 Oct 13 18:48 log.46376905._067138.job.log.tgz.1
[2025-10-13 18:49:40] -rw------- 1 boinc boinc      7760 Oct 13 18:48 heartbeat.json
[2025-10-13 18:49:40] -rw------- 1 boinc boinc        95 Oct 13 18:48 pilot_heartbeat.json
[2025-10-13 18:49:40] -rw------- 1 boinc boinc      4937 Oct 13 18:49 pilotlog.txt
[2025-10-13 18:49:40] -rw------- 1 boinc boinc    697512 Oct 13 18:49 log.46376905._067138.job.log.1
[2025-10-13 18:49:40] -rw------- 1 boinc boinc       357 Oct 13 18:49 output.list
[2025-10-13 18:49:40] -rw-r--r-- 1 boinc boinc       620 Oct 13 18:49 runtime_log
[2025-10-13 18:49:40] -rw------- 1 boinc boinc    962560 Oct 13 18:49 result.tar.gz
[2025-10-13 18:49:40] -rw-r--r-- 1 boinc boinc      8787 Oct 13 18:49 runtime_log.err
[2025-10-13 18:49:40] -rw------- 1 boinc boinc       660 Oct 13 18:49 6pZMDmQ0NP8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmhYMNDmEW8Ixm.diag
[2025-10-13 18:49:40] -rw-r--r-- 1 boinc boinc      8192 Oct 13 18:49 boinc_mmap_file
[2025-10-13 18:49:40] -rw-r--r-- 1 boinc boinc        27 Oct 13 18:49 wrapper_checkpoint.txt
[2025-10-13 18:49:40] -rw-r--r-- 1 boinc boinc     22375 Oct 13 18:49 stderr.txt
[2025-10-13 18:49:40] HITS file was successfully produced:
[2025-10-13 18:49:40] -rw------- 1 boinc boinc 176365887 Oct 13 18:47 shared/HITS.pool.root.1
[2025-10-13 18:49:40]  *** Contents of shared directory: ***
[2025-10-13 18:49:40] total 384724
[2025-10-13 18:49:40] -rw-r--r-- 2 boinc boinc 216027905 Oct 13 17:28 ATLAS.root_0
[2025-10-13 18:49:40] -rw-r--r-- 2 boinc boinc    565601 Oct 13 17:28 input.tar.gz
[2025-10-13 18:49:40] -rw-r--r-- 2 boinc boinc     15120 Oct 13 17:28 start_atlas.sh
[2025-10-13 18:49:40] -rw------- 1 boinc boinc 176365887 Oct 13 18:47 HITS.pool.root.1
[2025-10-13 18:49:40] -rw------- 1 boinc boinc    962560 Oct 13 18:49 result.tar.gz
18:49:42 (159853): run_atlas exited; CPU time 13539.929330
18:49:42 (159853): called boinc_finish(0)

</stderr_txt>
]]>

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