Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
01:40:53 (3679): wrapper (7.7.26015): starting
01:40:53 (3679): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 01:40:53] Arguments: --nthreads 8
[2025-10-13 01:40:53] Threads: 8
[2025-10-13 01:40:53] Checking for CVMFS
[2025-10-13 01:40:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 01:40:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 01:40:54] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 01:40:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 01:40:54] 2.11.2.0 8814 53894 114148 151650 1 57 18309826 18432000 1833 130560 0 49219631 99.974 2419422 39846 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 01:40:54] CVMFS is ok
[2025-10-13 01:40:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 01:40:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 01:40:54] Further information can be found at the LHC@home message board.
[2025-10-13 01:40:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 01:40:54] Checking for apptainer binary...
[2025-10-13 01:40:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 01:40:54] Running /usr/bin/apptainer --version
[2025-10-13 01:40:54] apptainer version 1.3.2-1.el7
[2025-10-13 01:40:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 01:40:55] c-206-19.aglt2.org
[2025-10-13 01:40:55] apptainer works
[2025-10-13 01:40:55] Set ATHENA_PROC_NUMBER=8
[2025-10-13 01:40:55] Set ATHENA_CORE_NUMBER=8
[2025-10-13 01:40:55] Starting ATLAS job with PandaID=6841069275
[2025-10-13 01:40:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 04:36:28]  *** The last 200 lines of the pilot log: ***
[2025-10-13 04:36:28] 2025-10-13 08:35:46,246 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 04:36:28] 2025-10-13 08:35:46,246 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 04:36:28] 2025-10-13 08:35:46,250 | INFO     | fitting pss+swap vs Time
[2025-10-13 04:36:28] 2025-10-13 08:35:46,250 | INFO     | sum of square deviations: 1577789583.0
[2025-10-13 04:36:28] 2025-10-13 08:35:46,251 | INFO     | sum of deviations: -25957654428.5
[2025-10-13 04:36:28] 2025-10-13 08:35:46,251 | INFO     | mean x: 1760339305.5
[2025-10-13 04:36:28] 2025-10-13 08:35:46,251 | INFO     | mean y: 2517292.0872093025
[2025-10-13 04:36:28] 2025-10-13 08:35:46,251 | INFO     | -- intersect: 28963463581.383812
[2025-10-13 04:36:28] 2025-10-13 08:35:46,252 | INFO     | intersect: 28963463581.383812
[2025-10-13 04:36:28] 2025-10-13 08:35:46,252 | INFO     | chi2: 2.3863896909153777
[2025-10-13 04:36:28] 2025-10-13 08:35:46,252 | INFO     | sum of square deviations: 1444149868.0
[2025-10-13 04:36:28] 2025-10-13 08:35:46,253 | INFO     | sum of deviations: -13487851093.0
[2025-10-13 04:36:28] 2025-10-13 08:35:46,253 | INFO     | mean x: 1760339153.0
[2025-10-13 04:36:28] 2025-10-13 08:35:46,253 | INFO     | mean y: 2531218.0359281437
[2025-10-13 04:36:28] 2025-10-13 08:35:46,253 | INFO     | -- intersect: 16443478861.318712
[2025-10-13 04:36:28] 2025-10-13 08:35:46,253 | INFO     | intersect: 16443478861.318712
[2025-10-13 04:36:28] 2025-10-13 08:35:46,254 | INFO     | chi2: 1.6174992561876957
[2025-10-13 04:36:28] 2025-10-13 08:35:46,254 | INFO     | current chi2=1.6174992561876957 (change=32.21981881897709 %)
[2025-10-13 04:36:28] 2025-10-13 08:35:46,254 | INFO     | sum of square deviations: 1318277740.5
[2025-10-13 04:36:28] 2025-10-13 08:35:46,255 | INFO     | sum of deviations: -12540101016.500002
[2025-10-13 04:36:28] 2025-10-13 08:35:46,255 | INFO     | mean x: 1760339000.5
[2025-10-13 04:36:28] 2025-10-13 08:35:46,255 | INFO     | mean y: 2532366.62345679
[2025-10-13 04:36:28] 2025-10-13 08:35:46,255 | INFO     | -- intersect: 16747735756.906027
[2025-10-13 04:36:28] 2025-10-13 08:35:46,255 | INFO     | intersect: 16747735756.906027
[2025-10-13 04:36:28] 2025-10-13 08:35:46,255 | INFO     | chi2: 1.6167680305801533
[2025-10-13 04:36:28] 2025-10-13 08:35:46,256 | INFO     | current chi2=1.6167680305801533 (change=0.04520716808648788 %)
[2025-10-13 04:36:28] 2025-10-13 08:35:46,256 | INFO     | right removable region: 161
[2025-10-13 04:36:28] 2025-10-13 08:35:46,256 | INFO     | sum of square deviations: 1444149868.0
[2025-10-13 04:36:28] 2025-10-13 08:35:46,257 | INFO     | sum of deviations: -51294011291.0
[2025-10-13 04:36:28] 2025-10-13 08:35:46,257 | INFO     | mean x: 1760339458.0
[2025-10-13 04:36:28] 2025-10-13 08:35:46,257 | INFO     | mean y: 2545815.3053892218
[2025-10-13 04:36:28] 2025-10-13 08:35:46,257 | INFO     | -- intersect: 62527131410.908424
[2025-10-13 04:36:28] 2025-10-13 08:35:46,257 | INFO     | intersect: 62527131410.908424
[2025-10-13 04:36:28] 2025-10-13 08:35:46,257 | INFO     | chi2: 0.9667219633316311
[2025-10-13 04:36:28] 2025-10-13 08:35:46,257 | INFO     | current chi2=0.9667219633316311 (change=59.490188588569815 %)
[2025-10-13 04:36:28] 2025-10-13 08:35:46,258 | INFO     | sum of square deviations: 1318277740.5
[2025-10-13 04:36:28] 2025-10-13 08:35:46,258 | INFO     | sum of deviations: -50513316973.499985
[2025-10-13 04:36:28] 2025-10-13 08:35:46,259 | INFO     | mean x: 1760339610.5
[2025-10-13 04:36:28] 2025-10-13 08:35:46,259 | INFO     | mean y: 2544803.388888889
[2025-10-13 04:36:28] 2025-10-13 08:35:46,259 | INFO     | -- intersect: 67454637783.78614
[2025-10-13 04:36:28] 2025-10-13 08:35:46,259 | INFO     | intersect: 67454637783.78614
[2025-10-13 04:36:28] 2025-10-13 08:35:46,259 | INFO     | chi2: 0.9433978382939169
[2025-10-13 04:36:28] 2025-10-13 08:35:46,259 | INFO     | current chi2=0.9433978382939169 (change=2.4127025062440755 %)
[2025-10-13 04:36:28] 2025-10-13 08:35:46,259 | INFO     | left removable region: 20
[2025-10-13 04:36:28] 2025-10-13 08:35:46,260 | INFO     | sum of square deviations: 869188390.0
[2025-10-13 04:36:28] 2025-10-13 08:35:46,260 | INFO     | sum of deviations: -28260794858.999992
[2025-10-13 04:36:28] 2025-10-13 08:35:46,260 | INFO     | mean x: 1760339580.0
[2025-10-13 04:36:28] 2025-10-13 08:35:46,260 | INFO     | mean y: 2550933.9574468085
[2025-10-13 04:36:28] 2025-10-13 08:35:46,261 | INFO     | -- intersect: 57238239220.772
[2025-10-13 04:36:28] 2025-10-13 08:35:46,261 | INFO     | intersect: 57238239220.772
[2025-10-13 04:36:28] 2025-10-13 08:35:46,261 | INFO     | chi2: 0.13445963859052346
[2025-10-13 04:36:28] 2025-10-13 08:35:46,261 | INFO     | -- intersect: 57238239220.772
[2025-10-13 04:36:28] 2025-10-13 08:35:46,261 | INFO     | current memory leak: -32.51 B/s (using 141 data points, chi2=0.13)
[2025-10-13 04:36:28] 2025-10-13 08:35:46,261 | INFO     | could have reported an average CPU frequency of 2562 MHz (9 samples)
[2025-10-13 04:36:28] 2025-10-13 08:35:46,262 | INFO     | ..............................
[2025-10-13 04:36:28] 2025-10-13 08:35:46,262 | INFO     | . Timing measurements:
[2025-10-13 04:36:28] 2025-10-13 08:35:46,262 | INFO     | . get job = 0 s
[2025-10-13 04:36:28] 2025-10-13 08:35:46,262 | INFO     | . initial setup = 2 s
[2025-10-13 04:36:28] 2025-10-13 08:35:46,262 | INFO     | . payload setup = 4 s
[2025-10-13 04:36:28] 2025-10-13 08:35:46,262 | INFO     | . stage-in = 0 s
[2025-10-13 04:36:28] 2025-10-13 08:35:46,262 | INFO     | . payload execution = 10452 s
[2025-10-13 04:36:28] 2025-10-13 08:35:46,262 | INFO     | . stage-out = 0 s
[2025-10-13 04:36:28] 2025-10-13 08:35:46,262 | INFO     | . log creation = 0 s
[2025-10-13 04:36:28] 2025-10-13 08:35:46,263 | INFO     | ..............................
[2025-10-13 04:36:28] 2025-10-13 08:35:46,405 | INFO     | 
[2025-10-13 04:36:28] 2025-10-13 08:35:46,405 | INFO     | job summary report
[2025-10-13 04:36:28] 2025-10-13 08:35:46,405 | INFO     | --------------------------------------------------
[2025-10-13 04:36:28] 2025-10-13 08:35:46,406 | INFO     | PanDA job id: 6841069275
[2025-10-13 04:36:28] 2025-10-13 08:35:46,406 | INFO     | task id: 46676269
[2025-10-13 04:36:28] 2025-10-13 08:35:46,406 | INFO     | errors: (none)
[2025-10-13 04:36:28] 2025-10-13 08:35:46,406 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 04:36:28] 2025-10-13 08:35:46,406 | INFO     | pilot state: finished 
[2025-10-13 04:36:28] 2025-10-13 08:35:46,406 | INFO     | transexitcode: 0
[2025-10-13 04:36:28] 2025-10-13 08:35:46,407 | INFO     | exeerrorcode: 0
[2025-10-13 04:36:28] 2025-10-13 08:35:46,407 | INFO     | exeerrordiag: 
[2025-10-13 04:36:28] 2025-10-13 08:35:46,407 | INFO     | exitcode: 0
[2025-10-13 04:36:28] 2025-10-13 08:35:46,407 | INFO     | exitmsg: OK
[2025-10-13 04:36:28] 2025-10-13 08:35:46,407 | INFO     | cpuconsumptiontime: 79266 s
[2025-10-13 04:36:28] 2025-10-13 08:35:46,407 | INFO     | nevents: 400
[2025-10-13 04:36:28] 2025-10-13 08:35:46,408 | INFO     | neventsw: 0
[2025-10-13 04:36:28] 2025-10-13 08:35:46,408 | INFO     | pid: 13843
[2025-10-13 04:36:28] 2025-10-13 08:35:46,408 | INFO     | pgrp: 13843
[2025-10-13 04:36:28] 2025-10-13 08:35:46,408 | INFO     | corecount: 8
[2025-10-13 04:36:28] 2025-10-13 08:35:46,408 | INFO     | event service: False
[2025-10-13 04:36:28] 2025-10-13 08:35:46,408 | INFO     | sizes: {0: 2348686, 1: 2348885, 4: 2349147, 11: 2349175, 10460: 2377977, 10461: 2386975, 10462: 2387159, 10466: 2387417}
[2025-10-13 04:36:28] 2025-10-13 08:35:46,409 | INFO     | --------------------------------------------------
[2025-10-13 04:36:28] 2025-10-13 08:35:46,409 | INFO     | 
[2025-10-13 04:36:28] 2025-10-13 08:35:46,409 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 04:36:28] 2025-10-13 08:35:46,427 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 04:36:28] 2025-10-13 08:35:46,428 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 04:36:28] 2025-10-13 08:35:46,428 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 04:36:28] 2025-10-13 08:35:46,428 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 04:36:28] 2025-10-13 08:35:46,428 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 04:36:28] 2025-10-13 08:35:46,428 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 04:36:28] 2025-10-13 08:35:46,428 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 04:36:28] 2025-10-13 08:35:46,429 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 04:36:28] 2025-10-13 08:35:46,429 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 04:36:28] 2025-10-13 08:35:46,429 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 04:36:28] 2025-10-13 08:35:46,429 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 04:36:28] 2025-10-13 08:35:46,429 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 04:36:28] 2025-10-13 08:35:46,430 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 04:36:28] 2025-10-13 08:35:46,430 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 04:36:28] 2025-10-13 08:35:46,430 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 04:36:28] 2025-10-13 08:35:46,430 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 04:36:28] 2025-10-13 08:35:46,430 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 04:36:28] 2025-10-13 08:35:46,430 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 04:36:28] 2025-10-13 08:35:46,431 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 04:36:28] 2025-10-13 08:35:46,431 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 04:36:28] 2025-10-13 08:35:46,431 | INFO     | job 6841069275 has completed (purged errors)
[2025-10-13 04:36:28] 2025-10-13 08:35:46,431 | INFO     | overall cleanup function is called
[2025-10-13 04:36:28] 2025-10-13 08:35:47,439 | INFO     | --- collectZombieJob: --- 10, [13843]
[2025-10-13 04:36:28] 2025-10-13 08:35:47,440 | INFO     | zombie collector waiting for pid 13843
[2025-10-13 04:36:28] 2025-10-13 08:35:47,440 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 04:36:28] 2025-10-13 08:35:47,440 | INFO     | collected zombie processes
[2025-10-13 04:36:28] 2025-10-13 08:35:47,440 | INFO     | will attempt to kill all subprocesses of pid=13843
[2025-10-13 04:36:28] 2025-10-13 08:35:47,602 | INFO     | process IDs to be killed: [13843] (in reverse order)
[2025-10-13 04:36:28] 2025-10-13 08:35:47,644 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 04:36:28] 2025-10-13 08:35:47,645 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 04:36:28] 2025-10-13 08:35:47,650 | INFO     | did not find any defunct processes belonging to 13843
[2025-10-13 04:36:28] 2025-10-13 08:35:47,654 | INFO     | did not find any defunct processes belonging to 13843
[2025-10-13 04:36:28] 2025-10-13 08:35:47,655 | INFO     | ready for new job
[2025-10-13 04:36:28] 2025-10-13 08:35:47,655 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 04:36:28] 2025-10-13 08:35:47,657 | INFO     | ***************************************
[2025-10-13 04:36:28] 2025-10-13 08:35:47,657 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 04:36:28] 2025-10-13 08:35:47,657 | INFO     | ***************************************
[2025-10-13 04:36:28] 2025-10-13 08:35:47,657 | INFO     | 
[2025-10-13 04:36:28] 2025-10-13 08:35:47,659 | INFO     | architecture information:
[2025-10-13 04:36:28] 2025-10-13 08:35:47,659 | INFO     | executing command: cat /etc/os-release
[2025-10-13 04:36:28] 2025-10-13 08:35:47,673 | INFO     | cat /etc/os-release:
[2025-10-13 04:36:28] NAME="CentOS Linux"
[2025-10-13 04:36:28] VERSION="7 (Core)"
[2025-10-13 04:36:28] ID="centos"
[2025-10-13 04:36:28] ID_LIKE="rhel fedora"
[2025-10-13 04:36:28] VERSION_ID="7"
[2025-10-13 04:36:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 04:36:28] ANSI_COLOR="0;31"
[2025-10-13 04:36:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 04:36:28] HOME_URL="https://www.centos.org/"
[2025-10-13 04:36:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 04:36:28] 
[2025-10-13 04:36:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 04:36:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 04:36:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 04:36:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 04:36:28] 
[2025-10-13 04:36:28] 2025-10-13 08:35:47,673 | INFO     | ***************************************
[2025-10-13 04:36:28] 2025-10-13 08:35:48,176 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 04:36:28] 2025-10-13 08:35:48,196 | INFO     | sufficient remaining disk space (28059893760 B)
[2025-10-13 04:36:28] 2025-10-13 08:35:48,196 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 04:36:28] 2025-10-13 08:35:48,197 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 04:36:28] 2025-10-13 08:35:48,197 | INFO     | update_server=False
[2025-10-13 04:36:28] 2025-10-13 08:35:48,197 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 04:36:28] 2025-10-13 08:35:48,198 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 04:36:28] 2025-10-13 08:35:48,198 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 04:36:28] 2025-10-13 08:35:48,466 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 04:36:28] 2025-10-13 08:35:48,466 | INFO     | aborting loop
[2025-10-13 04:36:28] 2025-10-13 08:35:48,713 | INFO     | all data control threads have been joined
[2025-10-13 04:36:28] 2025-10-13 08:35:48,907 | INFO     | all payload control threads have been joined
[2025-10-13 04:36:28] 2025-10-13 08:35:48,990 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 04:36:28] 2025-10-13 08:35:49,182 | INFO     | all job control threads have been joined
[2025-10-13 04:36:28] 2025-10-13 08:35:49,203 | INFO     | [job] queue monitor thread has finished
[2025-10-13 04:36:28] 2025-10-13 08:35:49,204 | INFO     | [job] retrieve thread has finished
[2025-10-13 04:36:28] 2025-10-13 08:35:49,227 | INFO     | [job] validate thread has finished
[2025-10-13 04:36:28] 2025-10-13 08:35:49,298 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 04:36:28] 2025-10-13 08:35:49,310 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 04:36:28] 2025-10-13 08:35:49,344 | INFO     | [data] copytool_in thread has finished
[2025-10-13 04:36:28] 2025-10-13 08:35:49,471 | INFO     | [job] job monitor thread has finished
[2025-10-13 04:36:28] 2025-10-13 08:35:49,570 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 04:36:28] 2025-10-13 08:35:49,718 | INFO     | [data] control thread has finished
[2025-10-13 04:36:28] 2025-10-13 08:35:49,912 | INFO     | [payload] control thread has finished
[2025-10-13 04:36:28] 2025-10-13 08:35:50,187 | INFO     | [job] control thread has finished
[2025-10-13 04:36:28] 2025-10-13 08:35:50,205 | INFO     | [data] copytool_out thread has finished
[2025-10-13 04:36:28] 2025-10-13 08:35:50,236 | INFO     | [payload] validate_post thread has finished
[2025-10-13 04:36:28] 2025-10-13 08:35:50,664 | INFO     | [payload] failed_post thread has finished
[2025-10-13 04:36:28] 2025-10-13 08:35:52,996 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 04:36:28] 2025-10-13 08:35:58,929 | INFO     | job.realtimelogging is not enabled
[2025-10-13 04:36:28] 2025-10-13 08:35:59,935 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 04:36:28] 2025-10-13 08:36:18,449 | INFO     | PID=7452 has CPU usage=5.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-13 04:36:28] 2025-10-13 08:36:18,449 | INFO     | .. there are 3 such processes running
[2025-10-13 04:36:28] 2025-10-13 08:36:18,450 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 04:36:28] 2025-10-13 08:36:18,450 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 04:36:28] 2025-10-13 08:36:18,450 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 04:36:28] 2025-10-13 08:36:22,536 | INFO     | [monitor] cgroup control has ended
[2025-10-13 04:36:28] 2025-10-13 08:36:22,866 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139883448166208)>', '<ExcThread(monitor, started 139883150550784)>']
[2025-10-13 04:36:28] 2025-10-13 08:36:23,476 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 04:36:28] 2025-10-13 08:36:23,476 | INFO     | [monitor] control thread has ended
[2025-10-13 04:36:28] 2025-10-13 08:36:27,891 | INFO     | all workflow threads have been joined
[2025-10-13 04:36:28] 2025-10-13 08:36:27,902 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 04:36:28] 2025-10-13 08:36:27,903 | INFO     | traces error code: 0
[2025-10-13 04:36:28] 2025-10-13 08:36:27,903 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 04:36:28] 2025-10-13 08:36:28,033 [wrapper] ==== pilot stdout END ====
[2025-10-13 04:36:28] 2025-10-13 08:36:28,036 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 04:36:28] 2025-10-13 08:36:28,038 [wrapper] pilotpid: 7452
[2025-10-13 04:36:28] 2025-10-13 08:36:28,040 [wrapper] Pilot exit status: 0
[2025-10-13 04:36:28] 2025-10-13 08:36:28,051 [wrapper] pandaids: 6841069275
[2025-10-13 04:36:28] 2025-10-13 08:36:28,090 [wrapper] cleanup supervisor_pilot 15659 7453
[2025-10-13 04:36:28] 2025-10-13 08:36:28,092 [wrapper] Test setup, not cleaning
[2025-10-13 04:36:28] 2025-10-13 08:36:28,095 [wrapper] apfmon messages muted
[2025-10-13 04:36:28] 2025-10-13 08:36:28,097 [wrapper] ==== wrapper stdout END ====
[2025-10-13 04:36:28] 2025-10-13 08:36:28,099 [wrapper] ==== wrapper stderr END ====
[2025-10-13 04:36:28]  *** Error codes and diagnostics ***
[2025-10-13 04:36:28]     "exeErrorCode": 0,
[2025-10-13 04:36:28]     "exeErrorDiag": "",
[2025-10-13 04:36:28]     "pilotErrorCode": 0,
[2025-10-13 04:36:28]     "pilotErrorDiag": "",
[2025-10-13 04:36:28]  *** Listing of results directory ***
[2025-10-13 04:36:28] total 410872
[2025-10-13 04:36:28] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 20:11 pilot3.tar.gz
[2025-10-13 04:36:28] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 20:44 queuedata.json
[2025-10-13 04:36:28] -rwx------ 1 boincer umatlas     36292 Oct 12 20:45 runpilot2-wrapper.sh
[2025-10-13 04:36:28] -rw-r--r-- 1 boincer umatlas       100 Oct 13 01:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 04:36:28] -rwxr-xr-x 1 boincer umatlas      7986 Oct 13 01:40 run_atlas
[2025-10-13 04:36:28] -rw-r--r-- 1 boincer umatlas       105 Oct 13 01:40 job.xml
[2025-10-13 04:36:28] -rw-r--r-- 2 boincer umatlas 221476906 Oct 13 01:40 EVNT.46676267._004703.pool.root.1
[2025-10-13 04:36:28] drwxrwx--x 2 boincer umatlas      4096 Oct 13 01:40 shared
[2025-10-13 04:36:28] -rw-r--r-- 2 boincer umatlas    569681 Oct 13 01:40 input.tar.gz
[2025-10-13 04:36:28] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 01:40 start_atlas.sh
[2025-10-13 04:36:28] -rw-r--r-- 1 boincer umatlas         0 Oct 13 01:40 boinc_lockfile
[2025-10-13 04:36:28] -rw-r--r-- 1 boincer umatlas      2550 Oct 13 01:40 pandaJob.out
[2025-10-13 04:36:28] -rw------- 1 boincer umatlas    973230 Oct 13 01:41 agis_schedconf.cvmfs.json
[2025-10-13 04:36:28] -rw------- 1 boincer umatlas   1560580 Oct 13 01:41 agis_ddmendpoints.agis.ALL.json
[2025-10-13 04:36:28] drwx------ 5 boincer umatlas      4096 Oct 13 01:41 pilot3
[2025-10-13 04:36:28] -rw------- 1 boincer umatlas 191603541 Oct 13 04:35 HITS.46676269._093407.pool.root.1
[2025-10-13 04:36:28] -rw-r--r-- 1 boincer umatlas       530 Oct 13 04:35 boinc_task_state.xml
[2025-10-13 04:36:28] -rw------- 1 boincer umatlas      1056 Oct 13 04:35 memory_monitor_summary.json
[2025-10-13 04:36:28] -rw------- 1 boincer umatlas        95 Oct 13 04:35 pilot_heartbeat.json
[2025-10-13 04:36:28] -rw------- 1 boincer umatlas    405270 Oct 13 04:35 log.46676269._093407.job.log.tgz.1
[2025-10-13 04:36:28] -rw------- 1 boincer umatlas      7865 Oct 13 04:35 heartbeat.json
[2025-10-13 04:36:28] -rw-r--r-- 1 boincer umatlas      5953 Oct 13 04:36 init_data.xml
[2025-10-13 04:36:28] -rw-r--r-- 1 boincer umatlas      8192 Oct 13 04:36 boinc_mmap_file
[2025-10-13 04:36:28] -rw-r--r-- 1 boincer umatlas        28 Oct 13 04:36 wrapper_checkpoint.txt
[2025-10-13 04:36:28] -rw------- 1 boincer umatlas      4892 Oct 13 04:36 pilotlog.txt
[2025-10-13 04:36:28] -rw------- 1 boincer umatlas   1470526 Oct 13 04:36 log.46676269._093407.job.log.1
[2025-10-13 04:36:28] -rw------- 1 boincer umatlas       357 Oct 13 04:36 output.list
[2025-10-13 04:36:28] -rw-r--r-- 1 boincer umatlas       620 Oct 13 04:36 runtime_log
[2025-10-13 04:36:28] -rw------- 1 boincer umatlas   1894400 Oct 13 04:36 result.tar.gz
[2025-10-13 04:36:28] -rw------- 1 boincer umatlas       662 Oct 13 04:36 Y3yLDmSsLS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmbEmNDmgkyvpm.diag
[2025-10-13 04:36:28] -rw-r--r-- 1 boincer umatlas      8704 Oct 13 04:36 runtime_log.err
[2025-10-13 04:36:28] -rw-r--r-- 1 boincer umatlas     20860 Oct 13 04:36 stderr.txt
[2025-10-13 04:36:28] HITS file was successfully produced:
[2025-10-13 04:36:28] -rw------- 1 boincer umatlas 191603541 Oct 13 04:35 shared/HITS.pool.root.1
[2025-10-13 04:36:28]  *** Contents of shared directory: ***
[2025-10-13 04:36:28] total 405836
[2025-10-13 04:36:28] -rw-r--r-- 2 boincer umatlas 221476906 Oct 13 01:40 ATLAS.root_0
[2025-10-13 04:36:28] -rw-r--r-- 2 boincer umatlas    569681 Oct 13 01:40 input.tar.gz
[2025-10-13 04:36:28] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 01:40 start_atlas.sh
[2025-10-13 04:36:28] -rw------- 1 boincer umatlas 191603541 Oct 13 04:35 HITS.pool.root.1
[2025-10-13 04:36:28] -rw------- 1 boincer umatlas   1894400 Oct 13 04:36 result.tar.gz
04:36:29 (3679): run_atlas exited; CPU time 79384.769512
04:36:29 (3679): called boinc_finish(0)

</stderr_txt>
]]>

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