Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
01:32:23 (4077): wrapper (7.7.26015): starting
01:32:23 (4077): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 01:32:23] Arguments: --nthreads 8
[2025-10-13 01:32:23] Threads: 8
[2025-10-13 01:32:23] Checking for CVMFS
[2025-10-13 01:32:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 01:32:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 01:32:24] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 01:32:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 01:32:24] 2.11.2.0 2790 6665 73560 151650 3 57 12970879 20275200 1 130560 0 4305585 99.989 229924 34199 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 01:32:24] CVMFS is ok
[2025-10-13 01:32:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 01:32:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 01:32:24] Further information can be found at the LHC@home message board.
[2025-10-13 01:32:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 01:32:24] Checking for apptainer binary...
[2025-10-13 01:32:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 01:32:24] Running /usr/bin/apptainer --version
[2025-10-13 01:32:24] apptainer version 1.3.2-1.el7
[2025-10-13 01:32:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 01:32:25] c-204-12.aglt2.org
[2025-10-13 01:32:25] apptainer works
[2025-10-13 01:32:25] Set ATHENA_PROC_NUMBER=8
[2025-10-13 01:32:25] Set ATHENA_CORE_NUMBER=8
[2025-10-13 01:32:25] Starting ATLAS job with PandaID=6842158992
[2025-10-13 01:32:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 03:35:00]  *** The last 200 lines of the pilot log: ***
[2025-10-13 03:35:00] 2025-10-13 07:33:57,184 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 03:35:00] 2025-10-13 07:33:57,185 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 03:35:00] 2025-10-13 07:33:57,188 | INFO     | fitting pss+swap vs Time
[2025-10-13 03:35:00] 2025-10-13 07:33:57,188 | INFO     | sum of square deviations: 522502820.0
[2025-10-13 03:35:00] 2025-10-13 07:33:57,189 | INFO     | sum of deviations: -5716418824.000005
[2025-10-13 03:35:00] 2025-10-13 07:33:57,189 | INFO     | mean x: 1760337193.0
[2025-10-13 03:35:00] 2025-10-13 07:33:57,189 | INFO     | mean y: 2625972.1848739497
[2025-10-13 03:35:00] 2025-10-13 07:33:57,189 | INFO     | -- intersect: 19261516606.789547
[2025-10-13 03:35:00] 2025-10-13 07:33:57,189 | INFO     | intersect: 19261516606.789547
[2025-10-13 03:35:00] 2025-10-13 07:33:57,190 | INFO     | chi2: 1.661819257081242
[2025-10-13 03:35:00] 2025-10-13 07:33:57,190 | INFO     | sum of square deviations: 459366752.5
[2025-10-13 03:35:00] 2025-10-13 07:33:57,190 | INFO     | sum of deviations: -4094172745.9999986
[2025-10-13 03:35:00] 2025-10-13 07:33:57,191 | INFO     | mean x: 1760337040.5
[2025-10-13 03:35:00] 2025-10-13 07:33:57,191 | INFO     | mean y: 2629893.543859649
[2025-10-13 03:35:00] 2025-10-13 07:33:57,191 | INFO     | -- intersect: 15691888847.889704
[2025-10-13 03:35:00] 2025-10-13 07:33:57,191 | INFO     | intersect: 15691888847.889704
[2025-10-13 03:35:00] 2025-10-13 07:33:57,191 | INFO     | chi2: 1.6643865345505688
[2025-10-13 03:35:00] 2025-10-13 07:33:57,192 | INFO     | current chi2=1.6643865345505688 (change=-0.15448596219999913 %)
[2025-10-13 03:35:00] 2025-10-13 07:33:57,192 | INFO     | right removable region: 113
[2025-10-13 03:35:00] 2025-10-13 07:33:57,192 | INFO     | sum of square deviations: 459366752.5
[2025-10-13 03:35:00] 2025-10-13 07:33:57,193 | INFO     | sum of deviations: -24898197461.5
[2025-10-13 03:35:00] 2025-10-13 07:33:57,193 | INFO     | mean x: 1760337345.5
[2025-10-13 03:35:00] 2025-10-13 07:33:57,193 | INFO     | mean y: 2671468.535087719
[2025-10-13 03:35:00] 2025-10-13 07:33:57,193 | INFO     | -- intersect: 95414946276.36798
[2025-10-13 03:35:00] 2025-10-13 07:33:57,193 | INFO     | intersect: 95414946276.36798
[2025-10-13 03:35:00] 2025-10-13 07:33:57,193 | INFO     | chi2: 0.12329561841885381
[2025-10-13 03:35:00] 2025-10-13 07:33:57,194 | INFO     | current chi2=0.12329561841885381 (change=92.58068421740366 %)
[2025-10-13 03:35:00] 2025-10-13 07:33:57,194 | INFO     | sum of square deviations: 401533110.0
[2025-10-13 03:35:00] 2025-10-13 07:33:57,195 | INFO     | sum of deviations: -24882492798.000008
[2025-10-13 03:35:00] 2025-10-13 07:33:57,195 | INFO     | mean x: 1760337498.0
[2025-10-13 03:35:00] 2025-10-13 07:33:57,195 | INFO     | mean y: 2671316.8348623854
[2025-10-13 03:35:00] 2025-10-13 07:33:57,195 | INFO     | -- intersect: 109088532545.15138
[2025-10-13 03:35:00] 2025-10-13 07:33:57,195 | INFO     | intersect: 109088532545.15138
[2025-10-13 03:35:00] 2025-10-13 07:33:57,195 | INFO     | chi2: 0.09031743727572833
[2025-10-13 03:35:00] 2025-10-13 07:33:57,196 | INFO     | current chi2=0.09031743727572833 (change=26.747245008410292 %)
[2025-10-13 03:35:00] 2025-10-13 07:33:57,196 | INFO     | sum of square deviations: 348769330.0
[2025-10-13 03:35:00] 2025-10-13 07:33:57,196 | INFO     | sum of deviations: -23182873740.500004
[2025-10-13 03:35:00] 2025-10-13 07:33:57,196 | INFO     | mean x: 1760337650.5
[2025-10-13 03:35:00] 2025-10-13 07:33:57,197 | INFO     | mean y: 2666388.5096153845
[2025-10-13 03:35:00] 2025-10-13 07:33:57,197 | INFO     | -- intersect: 117013200233.8736
[2025-10-13 03:35:00] 2025-10-13 07:33:57,197 | INFO     | intersect: 117013200233.8736
[2025-10-13 03:35:00] 2025-10-13 07:33:57,197 | INFO     | chi2: 0.0835496450543206
[2025-10-13 03:35:00] 2025-10-13 07:33:57,197 | INFO     | current chi2=0.0835496450543206 (change=7.493339520635948 %)
[2025-10-13 03:35:00] 2025-10-13 07:33:57,197 | INFO     | left removable region: 30
[2025-10-13 03:35:00] 2025-10-13 07:33:57,198 | INFO     | sum of square deviations: 177275882.0
[2025-10-13 03:35:00] 2025-10-13 07:33:57,198 | INFO     | sum of deviations: -14456162653.0
[2025-10-13 03:35:00] 2025-10-13 07:33:57,198 | INFO     | mean x: 1760337925.0
[2025-10-13 03:35:00] 2025-10-13 07:33:57,198 | INFO     | mean y: 2649005.0
[2025-10-13 03:35:00] 2025-10-13 07:33:57,198 | INFO     | -- intersect: 143551399579.22934
[2025-10-13 03:35:00] 2025-10-13 07:33:57,198 | INFO     | intersect: 143551399579.22934
[2025-10-13 03:35:00] 2025-10-13 07:33:57,199 | INFO     | chi2: 0.07108262222425464
[2025-10-13 03:35:00] 2025-10-13 07:33:57,199 | INFO     | -- intersect: 143551399579.22934
[2025-10-13 03:35:00] 2025-10-13 07:33:57,199 | INFO     | current memory leak: -81.55 B/s (using 83 data points, chi2=0.07)
[2025-10-13 03:35:00] 2025-10-13 07:33:57,199 | INFO     | could have reported an average CPU frequency of 1957 MHz (7 samples)
[2025-10-13 03:35:00] 2025-10-13 07:33:57,199 | INFO     | ..............................
[2025-10-13 03:35:00] 2025-10-13 07:33:57,200 | INFO     | . Timing measurements:
[2025-10-13 03:35:00] 2025-10-13 07:33:57,200 | INFO     | . get job = 0 s
[2025-10-13 03:35:00] 2025-10-13 07:33:57,200 | INFO     | . initial setup = 3 s
[2025-10-13 03:35:00] 2025-10-13 07:33:57,200 | INFO     | . payload setup = 8 s
[2025-10-13 03:35:00] 2025-10-13 07:33:57,200 | INFO     | . stage-in = 0 s
[2025-10-13 03:35:00] 2025-10-13 07:33:57,200 | INFO     | . payload execution = 7235 s
[2025-10-13 03:35:00] 2025-10-13 07:33:57,200 | INFO     | . stage-out = 0 s
[2025-10-13 03:35:00] 2025-10-13 07:33:57,200 | INFO     | . log creation = 0 s
[2025-10-13 03:35:00] 2025-10-13 07:33:57,200 | INFO     | ..............................
[2025-10-13 03:35:00] 2025-10-13 07:33:57,292 | INFO     | 
[2025-10-13 03:35:00] 2025-10-13 07:33:57,292 | INFO     | job summary report
[2025-10-13 03:35:00] 2025-10-13 07:33:57,293 | INFO     | --------------------------------------------------
[2025-10-13 03:35:00] 2025-10-13 07:33:57,293 | INFO     | PanDA job id: 6842158992
[2025-10-13 03:35:00] 2025-10-13 07:33:57,293 | INFO     | task id: 46676269
[2025-10-13 03:35:00] 2025-10-13 07:33:57,293 | INFO     | errors: (none)
[2025-10-13 03:35:00] 2025-10-13 07:33:57,293 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 03:35:00] 2025-10-13 07:33:57,293 | INFO     | pilot state: finished 
[2025-10-13 03:35:00] 2025-10-13 07:33:57,294 | INFO     | transexitcode: 0
[2025-10-13 03:35:00] 2025-10-13 07:33:57,294 | INFO     | exeerrorcode: 0
[2025-10-13 03:35:00] 2025-10-13 07:33:57,294 | INFO     | exeerrordiag: 
[2025-10-13 03:35:00] 2025-10-13 07:33:57,294 | INFO     | exitcode: 0
[2025-10-13 03:35:00] 2025-10-13 07:33:57,294 | INFO     | exitmsg: OK
[2025-10-13 03:35:00] 2025-10-13 07:33:57,295 | INFO     | cpuconsumptiontime: 53691 s
[2025-10-13 03:35:00] 2025-10-13 07:33:57,295 | INFO     | nevents: 400
[2025-10-13 03:35:00] 2025-10-13 07:33:57,295 | INFO     | neventsw: 0
[2025-10-13 03:35:00] 2025-10-13 07:33:57,295 | INFO     | pid: 14232
[2025-10-13 03:35:00] 2025-10-13 07:33:57,295 | INFO     | pgrp: 14232
[2025-10-13 03:35:00] 2025-10-13 07:33:57,295 | INFO     | corecount: 8
[2025-10-13 03:35:00] 2025-10-13 07:33:57,295 | INFO     | event service: False
[2025-10-13 03:35:00] 2025-10-13 07:33:57,296 | INFO     | sizes: {0: 2348807, 6: 2349069, 11: 2349097, 7247: 2376379, 7248: 2385433, 7257: 2385571}
[2025-10-13 03:35:00] 2025-10-13 07:33:57,296 | INFO     | --------------------------------------------------
[2025-10-13 03:35:00] 2025-10-13 07:33:57,296 | INFO     | 
[2025-10-13 03:35:00] 2025-10-13 07:33:57,296 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 03:35:00] 2025-10-13 07:33:57,323 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 03:35:00] 2025-10-13 07:33:57,323 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 03:35:00] 2025-10-13 07:33:57,324 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 03:35:00] 2025-10-13 07:33:57,324 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 03:35:00] 2025-10-13 07:33:57,324 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 03:35:00] 2025-10-13 07:33:57,324 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 03:35:00] 2025-10-13 07:33:57,324 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 03:35:00] 2025-10-13 07:33:57,325 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 03:35:00] 2025-10-13 07:33:57,325 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 03:35:00] 2025-10-13 07:33:57,325 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 03:35:00] 2025-10-13 07:33:57,325 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 03:35:00] 2025-10-13 07:33:57,325 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 03:35:00] 2025-10-13 07:33:57,325 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 03:35:00] 2025-10-13 07:33:57,326 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 03:35:00] 2025-10-13 07:33:57,326 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 03:35:00] 2025-10-13 07:33:57,326 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 03:35:00] 2025-10-13 07:33:57,326 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 03:35:00] 2025-10-13 07:33:57,326 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 03:35:00] 2025-10-13 07:33:57,327 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 03:35:00] 2025-10-13 07:33:57,327 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 03:35:00] 2025-10-13 07:33:57,327 | INFO     | job 6842158992 has completed (purged errors)
[2025-10-13 03:35:00] 2025-10-13 07:33:57,327 | INFO     | overall cleanup function is called
[2025-10-13 03:35:00] 2025-10-13 07:33:58,335 | INFO     | --- collectZombieJob: --- 10, [14232]
[2025-10-13 03:35:00] 2025-10-13 07:33:58,335 | INFO     | zombie collector waiting for pid 14232
[2025-10-13 03:35:00] 2025-10-13 07:33:58,347 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 03:35:00] 2025-10-13 07:33:58,347 | INFO     | collected zombie processes
[2025-10-13 03:35:00] 2025-10-13 07:33:58,347 | INFO     | will attempt to kill all subprocesses of pid=14232
[2025-10-13 03:35:00] 2025-10-13 07:33:58,438 | INFO     | process IDs to be killed: [14232] (in reverse order)
[2025-10-13 03:35:00] 2025-10-13 07:33:58,495 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 03:35:00] 2025-10-13 07:33:58,495 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 03:35:00] 2025-10-13 07:33:58,499 | INFO     | did not find any defunct processes belonging to 14232
[2025-10-13 03:35:00] 2025-10-13 07:33:58,503 | INFO     | did not find any defunct processes belonging to 14232
[2025-10-13 03:35:00] 2025-10-13 07:33:58,504 | INFO     | ready for new job
[2025-10-13 03:35:00] 2025-10-13 07:33:58,504 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 03:35:00] 2025-10-13 07:33:58,506 | INFO     | ***************************************
[2025-10-13 03:35:00] 2025-10-13 07:33:58,506 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 03:35:00] 2025-10-13 07:33:58,506 | INFO     | ***************************************
[2025-10-13 03:35:00] 2025-10-13 07:33:58,506 | INFO     | 
[2025-10-13 03:35:00] 2025-10-13 07:33:58,507 | INFO     | architecture information:
[2025-10-13 03:35:00] 2025-10-13 07:33:58,507 | INFO     | executing command: cat /etc/os-release
[2025-10-13 03:35:00] 2025-10-13 07:33:58,524 | INFO     | cat /etc/os-release:
[2025-10-13 03:35:00] NAME="CentOS Linux"
[2025-10-13 03:35:00] VERSION="7 (Core)"
[2025-10-13 03:35:00] ID="centos"
[2025-10-13 03:35:00] ID_LIKE="rhel fedora"
[2025-10-13 03:35:00] VERSION_ID="7"
[2025-10-13 03:35:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 03:35:00] ANSI_COLOR="0;31"
[2025-10-13 03:35:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 03:35:00] HOME_URL="https://www.centos.org/"
[2025-10-13 03:35:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 03:35:00] 
[2025-10-13 03:35:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 03:35:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 03:35:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 03:35:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 03:35:00] 
[2025-10-13 03:35:00] 2025-10-13 07:33:58,524 | INFO     | ***************************************
[2025-10-13 03:35:00] 2025-10-13 07:33:59,028 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 03:35:00] 2025-10-13 07:33:59,047 | INFO     | sufficient remaining disk space (18587058176 B)
[2025-10-13 03:35:00] 2025-10-13 07:33:59,048 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 03:35:00] 2025-10-13 07:33:59,048 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 03:35:00] 2025-10-13 07:33:59,048 | INFO     | update_server=False
[2025-10-13 03:35:00] 2025-10-13 07:33:59,049 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 03:35:00] 2025-10-13 07:33:59,049 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 03:35:00] 2025-10-13 07:33:59,049 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 03:35:00] 2025-10-13 07:33:59,050 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 03:35:00] 2025-10-13 07:33:59,395 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 03:35:00] 2025-10-13 07:33:59,395 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 03:35:00] 2025-10-13 07:33:59,396 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 03:35:00] 2025-10-13 07:33:59,396 | INFO     | will abort loop
[2025-10-13 03:35:00] 2025-10-13 07:33:59,507 | INFO     | all payload control threads have been joined
[2025-10-13 03:35:00] 2025-10-13 07:33:59,544 | INFO     | all data control threads have been joined
[2025-10-13 03:35:00] 2025-10-13 07:34:00,054 | INFO     | [job] retrieve thread has finished
[2025-10-13 03:35:00] 2025-10-13 07:34:00,056 | INFO     | [job] queue monitor thread has finished
[2025-10-13 03:35:00] 2025-10-13 07:34:00,075 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 03:35:00] 2025-10-13 07:34:00,148 | INFO     | [payload] failed_post thread has finished
[2025-10-13 03:35:00] 2025-10-13 07:34:00,401 | INFO     | [job] job monitor thread has finished
[2025-10-13 03:35:00] 2025-10-13 07:34:00,512 | INFO     | [payload] control thread has finished
[2025-10-13 03:35:00] 2025-10-13 07:34:00,549 | INFO     | [data] control thread has finished
[2025-10-13 03:35:00] 2025-10-13 07:34:00,584 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 03:35:00] 2025-10-13 07:34:00,646 | INFO     | all job control threads have been joined
[2025-10-13 03:35:00] 2025-10-13 07:34:00,768 | INFO     | [job] validate thread has finished
[2025-10-13 03:35:00] 2025-10-13 07:34:00,920 | INFO     | [payload] validate_post thread has finished
[2025-10-13 03:35:00] 2025-10-13 07:34:01,055 | INFO     | [data] copytool_out thread has finished
[2025-10-13 03:35:00] 2025-10-13 07:34:01,120 | INFO     | [data] copytool_in thread has finished
[2025-10-13 03:35:00] 2025-10-13 07:34:01,172 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 03:35:00] 2025-10-13 07:34:01,232 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 03:35:00] 2025-10-13 07:34:01,651 | INFO     | [job] control thread has finished
[2025-10-13 03:35:00] 2025-10-13 07:34:03,056 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 03:35:00] 2025-10-13 07:34:28,593 | INFO     | PID=7764 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-13 03:35:00] 2025-10-13 07:34:28,595 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 03:35:00] 2025-10-13 07:34:28,595 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 03:35:00] 2025-10-13 07:34:28,595 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 03:35:00] 2025-10-13 07:34:54,497 | INFO     | [monitor] cgroup control has ended
[2025-10-13 03:35:00] 2025-10-13 07:34:54,677 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139773211772736)>', '<ExcThread(monitor, started 139772093773568)>']
[2025-10-13 03:35:00] 2025-10-13 07:34:54,714 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 03:35:00] 2025-10-13 07:34:54,714 | INFO     | [monitor] control thread has ended
[2025-10-13 03:35:00] 2025-10-13 07:34:59,703 | INFO     | all workflow threads have been joined
[2025-10-13 03:35:00] 2025-10-13 07:34:59,707 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 03:35:00] 2025-10-13 07:34:59,708 | INFO     | traces error code: 0
[2025-10-13 03:35:00] 2025-10-13 07:34:59,708 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 03:35:00] 2025-10-13 07:34:59,828 [wrapper] ==== pilot stdout END ====
[2025-10-13 03:35:00] 2025-10-13 07:34:59,833 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 03:35:00] 2025-10-13 07:34:59,837 [wrapper] pilotpid: 7764
[2025-10-13 03:35:00] 2025-10-13 07:34:59,842 [wrapper] Pilot exit status: 0
[2025-10-13 03:35:00] 2025-10-13 07:34:59,860 [wrapper] pandaids: 6842158992
[2025-10-13 03:35:00] 2025-10-13 07:34:59,913 [wrapper] cleanup supervisor_pilot  4620 7765
[2025-10-13 03:35:00] 2025-10-13 07:34:59,918 [wrapper] Test setup, not cleaning
[2025-10-13 03:35:00] 2025-10-13 07:34:59,923 [wrapper] apfmon messages muted
[2025-10-13 03:35:00] 2025-10-13 07:34:59,927 [wrapper] ==== wrapper stdout END ====
[2025-10-13 03:35:00] 2025-10-13 07:34:59,932 [wrapper] ==== wrapper stderr END ====
[2025-10-13 03:35:00]  *** Error codes and diagnostics ***
[2025-10-13 03:35:00]     "exeErrorCode": 0,
[2025-10-13 03:35:00]     "exeErrorDiag": "",
[2025-10-13 03:35:00]     "pilotErrorCode": 0,
[2025-10-13 03:35:00]     "pilotErrorDiag": "",
[2025-10-13 03:35:00]  *** Listing of results directory ***
[2025-10-13 03:35:00] total 407088
[2025-10-13 03:35:00] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 23:15 pilot3.tar.gz
[2025-10-13 03:35:00] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 23:29 queuedata.json
[2025-10-13 03:35:00] -rwx------ 1 boincer umatlas     36292 Oct 12 23:30 runpilot2-wrapper.sh
[2025-10-13 03:35:00] -rw-r--r-- 1 boincer umatlas       100 Oct 13 01:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 03:35:00] -rwxr-xr-x 1 boincer umatlas      7986 Oct 13 01:32 run_atlas
[2025-10-13 03:35:00] -rw-r--r-- 1 boincer umatlas       105 Oct 13 01:32 job.xml
[2025-10-13 03:35:00] -rw-r--r-- 2 boincer umatlas 221723457 Oct 13 01:32 EVNT.46676267._003720.pool.root.1
[2025-10-13 03:35:00] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 01:32 start_atlas.sh
[2025-10-13 03:35:00] drwxrwx--x 2 boincer umatlas      4096 Oct 13 01:32 shared
[2025-10-13 03:35:00] -rw-r--r-- 2 boincer umatlas    569688 Oct 13 01:32 input.tar.gz
[2025-10-13 03:35:00] -rw-r--r-- 1 boincer umatlas         0 Oct 13 01:32 boinc_lockfile
[2025-10-13 03:35:00] -rw-r--r-- 1 boincer umatlas      2550 Oct 13 01:32 pandaJob.out
[2025-10-13 03:35:00] -rw------- 1 boincer umatlas    973230 Oct 13 01:32 agis_schedconf.cvmfs.json
[2025-10-13 03:35:00] -rw------- 1 boincer umatlas   1560580 Oct 13 01:32 agis_ddmendpoints.agis.ALL.json
[2025-10-13 03:35:00] drwx------ 5 boincer umatlas      4096 Oct 13 01:32 pilot3
[2025-10-13 03:35:00] -rw-r--r-- 1 boincer umatlas      5910 Oct 13 03:29 init_data.xml
[2025-10-13 03:35:00] -rw------- 1 boincer umatlas 188446233 Oct 13 03:33 HITS.46676269._095906.pool.root.1
[2025-10-13 03:35:00] -rw-r--r-- 1 boincer umatlas       529 Oct 13 03:33 boinc_task_state.xml
[2025-10-13 03:35:00] -rw------- 1 boincer umatlas      1051 Oct 13 03:33 memory_monitor_summary.json
[2025-10-13 03:35:00] -rw------- 1 boincer umatlas    376998 Oct 13 03:33 log.46676269._095906.job.log.tgz.1
[2025-10-13 03:35:00] -rw------- 1 boincer umatlas      7852 Oct 13 03:33 heartbeat.json
[2025-10-13 03:35:00] -rw------- 1 boincer umatlas        95 Oct 13 03:34 pilot_heartbeat.json
[2025-10-13 03:35:00] -rw-r--r-- 1 boincer umatlas        27 Oct 13 03:34 wrapper_checkpoint.txt
[2025-10-13 03:35:00] -rw-r--r-- 1 boincer umatlas      8192 Oct 13 03:34 boinc_mmap_file
[2025-10-13 03:35:00] -rw------- 1 boincer umatlas      4931 Oct 13 03:34 pilotlog.txt
[2025-10-13 03:35:00] -rw------- 1 boincer umatlas   1021651 Oct 13 03:34 log.46676269._095906.job.log.1
[2025-10-13 03:35:00] -rw------- 1 boincer umatlas       357 Oct 13 03:34 output.list
[2025-10-13 03:35:00] -rw-r--r-- 1 boincer umatlas       620 Oct 13 03:35 runtime_log
[2025-10-13 03:35:00] -rw------- 1 boincer umatlas   1413120 Oct 13 03:35 result.tar.gz
[2025-10-13 03:35:00] -rw-r--r-- 1 boincer umatlas      8703 Oct 13 03:35 runtime_log.err
[2025-10-13 03:35:00] -rw------- 1 boincer umatlas       659 Oct 13 03:35 BF2KDm6ROS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmxdVMDmcavbzm.diag
[2025-10-13 03:35:00] -rw-r--r-- 1 boincer umatlas     20860 Oct 13 03:35 stderr.txt
[2025-10-13 03:35:00] HITS file was successfully produced:
[2025-10-13 03:35:00] -rw------- 1 boincer umatlas 188446233 Oct 13 03:33 shared/HITS.pool.root.1
[2025-10-13 03:35:00]  *** Contents of shared directory: ***
[2025-10-13 03:35:00] total 402516
[2025-10-13 03:35:00] -rw-r--r-- 2 boincer umatlas 221723457 Oct 13 01:32 ATLAS.root_0
[2025-10-13 03:35:00] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 01:32 start_atlas.sh
[2025-10-13 03:35:00] -rw-r--r-- 2 boincer umatlas    569688 Oct 13 01:32 input.tar.gz
[2025-10-13 03:35:00] -rw------- 1 boincer umatlas 188446233 Oct 13 03:33 HITS.pool.root.1
[2025-10-13 03:35:00] -rw------- 1 boincer umatlas   1413120 Oct 13 03:35 result.tar.gz
03:35:01 (4077): run_atlas exited; CPU time 53701.838903
03:35:01 (4077): called boinc_finish(0)

</stderr_txt>
]]>

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