Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
01:36:09 (4124140): wrapper (7.7.26015): starting
01:36:09 (4124140): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 01:36:09] Arguments: --nthreads 8
[2025-10-13 01:36:09] Threads: 8
[2025-10-13 01:36:09] Checking for CVMFS
[2025-10-13 01:36:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 01:36:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 01:36:11] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 01:36:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 01:36:12] 2.13.2.0 558603 130290 523064 151650 3 544 32715590 32935937 39402 16776704 0 263696010 99.634 249463333 19917 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-13 01:36:12] CVMFS is ok
[2025-10-13 01:36:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 01:36:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 01:36:12] Further information can be found at the LHC@home message board.
[2025-10-13 01:36:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 01:36:12] Checking for apptainer binary...
[2025-10-13 01:36:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 01:36:12] Running /usr/bin/apptainer --version
[2025-10-13 01:36:12] apptainer version 1.4.3-1.el9
[2025-10-13 01:36:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 01:36:12] c6-6-8-3.aglt2.org
[2025-10-13 01:36:12] apptainer works
[2025-10-13 01:36:12] Set ATHENA_PROC_NUMBER=8
[2025-10-13 01:36:12] Set ATHENA_CORE_NUMBER=8
[2025-10-13 01:36:12] Starting ATLAS job with PandaID=6840851769
[2025-10-13 01:36:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 05:59:12]  *** The last 200 lines of the pilot log: ***
[2025-10-13 05:59:12] 2025-10-13 09:58:06,256 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 05:59:12] 2025-10-13 09:58:06,256 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 05:59:12] 2025-10-13 09:58:06,269 | INFO     | fitting pss+swap vs Time
[2025-10-13 05:59:12] 2025-10-13 09:58:06,270 | INFO     | sum of square deviations: 5021800417.723319
[2025-10-13 05:59:12] 2025-10-13 09:58:06,271 | INFO     | sum of deviations: 84056856053.58102
[2025-10-13 05:59:12] 2025-10-13 09:58:06,271 | INFO     | mean x: 1760341695.7312253
[2025-10-13 05:59:12] 2025-10-13 09:58:06,271 | INFO     | mean y: 2107610.9644268774
[2025-10-13 05:59:12] 2025-10-13 09:58:06,272 | INFO     | -- intersect: -29463178982.460045
[2025-10-13 05:59:12] 2025-10-13 09:58:06,272 | INFO     | intersect: -29463178982.460045
[2025-10-13 05:59:12] 2025-10-13 09:58:06,272 | INFO     | chi2: 3.434704397909947
[2025-10-13 05:59:12] 2025-10-13 09:58:06,272 | INFO     | sum of square deviations: 4729934812.435481
[2025-10-13 05:59:12] 2025-10-13 09:58:06,278 | INFO     | sum of deviations: 81913729735.27425
[2025-10-13 05:59:12] 2025-10-13 09:58:06,278 | INFO     | mean x: 1760341543.233871
[2025-10-13 05:59:12] 2025-10-13 09:58:06,279 | INFO     | mean y: 2106486.443548387
[2025-10-13 05:59:12] 2025-10-13 09:58:06,279 | INFO     | -- intersect: -30483755820.81881
[2025-10-13 05:59:12] 2025-10-13 09:58:06,279 | INFO     | intersect: -30483755820.81881
[2025-10-13 05:59:12] 2025-10-13 09:58:06,279 | INFO     | chi2: 3.435960015146561
[2025-10-13 05:59:12] 2025-10-13 09:58:06,279 | INFO     | current chi2=3.435960015146561 (change=-0.03655677726962129 %)
[2025-10-13 05:59:12] 2025-10-13 09:58:06,279 | INFO     | right removable region: 247
[2025-10-13 05:59:12] 2025-10-13 09:58:06,280 | INFO     | sum of square deviations: 4729899250.96368
[2025-10-13 05:59:12] 2025-10-13 09:58:06,281 | INFO     | sum of deviations: 29497701936.717743
[2025-10-13 05:59:12] 2025-10-13 09:58:06,281 | INFO     | mean x: 1760341848.237903
[2025-10-13 05:59:12] 2025-10-13 09:58:06,281 | INFO     | mean y: 2136004.0725806453
[2025-10-13 05:59:12] 2025-10-13 09:58:06,281 | INFO     | -- intersect: -10976118793.949377
[2025-10-13 05:59:12] 2025-10-13 09:58:06,282 | INFO     | intersect: -10976118793.949377
[2025-10-13 05:59:12] 2025-10-13 09:58:06,282 | INFO     | chi2: 0.7745445481197517
[2025-10-13 05:59:12] 2025-10-13 09:58:06,282 | INFO     | current chi2=0.7745445481197517 (change=77.44945537115015 %)
[2025-10-13 05:59:12] 2025-10-13 09:58:06,282 | INFO     | sum of square deviations: 4449503293.185199
[2025-10-13 05:59:12] 2025-10-13 09:58:06,288 | INFO     | sum of deviations: 8315714863.765439
[2025-10-13 05:59:12] 2025-10-13 09:58:06,288 | INFO     | mean x: 1760342000.7530863
[2025-10-13 05:59:12] 2025-10-13 09:58:06,288 | INFO     | mean y: 2147482.3127572015
[2025-10-13 05:59:12] 2025-10-13 09:58:06,288 | INFO     | -- intersect: -3287770779.663399
[2025-10-13 05:59:12] 2025-10-13 09:58:06,289 | INFO     | intersect: -3287770779.663399
[2025-10-13 05:59:12] 2025-10-13 09:58:06,289 | INFO     | chi2: 0.38353084709613006
[2025-10-13 05:59:12] 2025-10-13 09:58:06,289 | INFO     | current chi2=0.38353084709613006 (change=50.4830486474701 %)
[2025-10-13 05:59:12] 2025-10-13 09:58:06,289 | INFO     | sum of square deviations: 4180439397.84875
[2025-10-13 05:59:12] 2025-10-13 09:58:06,297 | INFO     | sum of deviations: -1572919215.9747858
[2025-10-13 05:59:12] 2025-10-13 09:58:06,297 | INFO     | mean x: 1760342153.2605042
[2025-10-13 05:59:12] 2025-10-13 09:58:06,297 | INFO     | mean y: 2153088.7899159663
[2025-10-13 05:59:12] 2025-10-13 09:58:06,297 | INFO     | -- intersect: 664493990.3178126
[2025-10-13 05:59:12] 2025-10-13 09:58:06,298 | INFO     | intersect: 664493990.3178126
[2025-10-13 05:59:12] 2025-10-13 09:58:06,298 | INFO     | chi2: 0.2999900468416193
[2025-10-13 05:59:12] 2025-10-13 09:58:06,298 | INFO     | current chi2=0.2999900468416193 (change=21.78202897812068 %)
[2025-10-13 05:59:12] 2025-10-13 09:58:06,298 | INFO     | left removable region: 30
[2025-10-13 05:59:12] 2025-10-13 09:58:06,298 | INFO     | sum of square deviations: 3168742512.0276585
[2025-10-13 05:59:12] 2025-10-13 09:58:06,300 | INFO     | sum of deviations: 4481350917.156684
[2025-10-13 05:59:12] 2025-10-13 09:58:06,300 | INFO     | mean x: 1760342427.737327
[2025-10-13 05:59:12] 2025-10-13 09:58:06,300 | INFO     | mean y: 2148245.5115207373
[2025-10-13 05:59:12] 2025-10-13 09:58:06,300 | INFO     | -- intersect: -2487392044.7162757
[2025-10-13 05:59:12] 2025-10-13 09:58:06,300 | INFO     | intersect: -2487392044.7162757
[2025-10-13 05:59:12] 2025-10-13 09:58:06,305 | INFO     | chi2: 0.2521733498833954
[2025-10-13 05:59:12] 2025-10-13 09:58:06,305 | INFO     | -- intersect: -2487392044.7162757
[2025-10-13 05:59:12] 2025-10-13 09:58:06,305 | INFO     | current memory leak: 1.41 B/s (using 217 data points, chi2=0.25)
[2025-10-13 05:59:12] 2025-10-13 09:58:06,306 | INFO     | could have reported an average CPU frequency of 2633 MHz (12 samples)
[2025-10-13 05:59:12] 2025-10-13 09:58:06,306 | INFO     | ..............................
[2025-10-13 05:59:12] 2025-10-13 09:58:06,306 | INFO     | . Timing measurements:
[2025-10-13 05:59:12] 2025-10-13 09:58:06,306 | INFO     | . get job = 0 s
[2025-10-13 05:59:12] 2025-10-13 09:58:06,306 | INFO     | . initial setup = 4 s
[2025-10-13 05:59:12] 2025-10-13 09:58:06,307 | INFO     | . payload setup = 42 s
[2025-10-13 05:59:12] 2025-10-13 09:58:06,307 | INFO     | . stage-in = 0 s
[2025-10-13 05:59:12] 2025-10-13 09:58:06,307 | INFO     | . payload execution = 15461 s
[2025-10-13 05:59:12] 2025-10-13 09:58:06,307 | INFO     | . stage-out = 6 s
[2025-10-13 05:59:12] 2025-10-13 09:58:06,307 | INFO     | . log creation = 1 s
[2025-10-13 05:59:12] 2025-10-13 09:58:06,307 | INFO     | ..............................
[2025-10-13 05:59:12] 2025-10-13 09:58:06,423 | INFO     | time since job start (15630s) is within the limit (172800.0s)
[2025-10-13 05:59:12] 2025-10-13 09:58:06,512 | INFO     | 
[2025-10-13 05:59:12] 2025-10-13 09:58:06,512 | INFO     | job summary report
[2025-10-13 05:59:12] 2025-10-13 09:58:06,512 | INFO     | --------------------------------------------------
[2025-10-13 05:59:12] 2025-10-13 09:58:06,512 | INFO     | PanDA job id: 6840851769
[2025-10-13 05:59:12] 2025-10-13 09:58:06,513 | INFO     | task id: 46676269
[2025-10-13 05:59:12] 2025-10-13 09:58:06,513 | INFO     | errors: (none)
[2025-10-13 05:59:12] 2025-10-13 09:58:06,513 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 05:59:12] 2025-10-13 09:58:06,513 | INFO     | pilot state: finished 
[2025-10-13 05:59:12] 2025-10-13 09:58:06,513 | INFO     | transexitcode: 0
[2025-10-13 05:59:12] 2025-10-13 09:58:06,513 | INFO     | exeerrorcode: 0
[2025-10-13 05:59:12] 2025-10-13 09:58:06,513 | INFO     | exeerrordiag: 
[2025-10-13 05:59:12] 2025-10-13 09:58:06,513 | INFO     | exitcode: 0
[2025-10-13 05:59:12] 2025-10-13 09:58:06,513 | INFO     | exitmsg: OK
[2025-10-13 05:59:12] 2025-10-13 09:58:06,513 | INFO     | cpuconsumptiontime: 43854 s
[2025-10-13 05:59:12] 2025-10-13 09:58:06,513 | INFO     | nevents: 400
[2025-10-13 05:59:12] 2025-10-13 09:58:06,513 | INFO     | neventsw: 0
[2025-10-13 05:59:12] 2025-10-13 09:58:06,513 | INFO     | pid: 4154097
[2025-10-13 05:59:12] 2025-10-13 09:58:06,513 | INFO     | pgrp: 4154097
[2025-10-13 05:59:12] 2025-10-13 09:58:06,513 | INFO     | corecount: 8
[2025-10-13 05:59:12] 2025-10-13 09:58:06,513 | INFO     | event service: False
[2025-10-13 05:59:12] 2025-10-13 09:58:06,514 | INFO     | sizes: {0: 2348686, 1: 2348686, 2: 2348885, 3: 2348913, 4: 2348941, 15: 2348969, 26: 2349125, 37: 2349125, 38: 2349415, 48: 2349443, 15509: 2380687, 15516: 2389741
[2025-10-13 05:59:12] 2025-10-13 09:58:06,514 | INFO     | --------------------------------------------------
[2025-10-13 05:59:12] 2025-10-13 09:58:06,514 | INFO     | 
[2025-10-13 05:59:12] 2025-10-13 09:58:06,514 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-13 05:59:12] 2025-10-13 09:58:06,785 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 05:59:12] 2025-10-13 09:58:06,785 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 05:59:12] 2025-10-13 09:58:06,785 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 05:59:12] 2025-10-13 09:58:06,785 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 05:59:12] 2025-10-13 09:58:06,785 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 05:59:12] 2025-10-13 09:58:06,786 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 05:59:12] 2025-10-13 09:58:06,786 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 05:59:12] 2025-10-13 09:58:06,786 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 05:59:12] 2025-10-13 09:58:06,786 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 05:59:12] 2025-10-13 09:58:06,786 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 05:59:12] 2025-10-13 09:58:06,786 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 05:59:12] 2025-10-13 09:58:06,786 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 05:59:12] 2025-10-13 09:58:06,786 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 05:59:12] 2025-10-13 09:58:06,786 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 05:59:12] 2025-10-13 09:58:06,786 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 05:59:12] 2025-10-13 09:58:06,786 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 05:59:12] 2025-10-13 09:58:06,786 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 05:59:12] 2025-10-13 09:58:06,786 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 05:59:12] 2025-10-13 09:58:06,787 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 05:59:12] 2025-10-13 09:58:06,787 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 05:59:12] 2025-10-13 09:58:06,787 | INFO     | job 6840851769 has completed (purged errors)
[2025-10-13 05:59:12] 2025-10-13 09:58:06,787 | INFO     | overall cleanup function is called
[2025-10-13 05:59:12] 2025-10-13 09:58:07,798 | INFO     | --- collectZombieJob: --- 10, [4154097]
[2025-10-13 05:59:12] 2025-10-13 09:58:07,798 | INFO     | zombie collector waiting for pid 4154097
[2025-10-13 05:59:12] 2025-10-13 09:58:07,798 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 05:59:12] 2025-10-13 09:58:07,798 | INFO     | collected zombie processes
[2025-10-13 05:59:12] 2025-10-13 09:58:07,798 | INFO     | will attempt to kill all subprocesses of pid=4154097
[2025-10-13 05:59:12] 2025-10-13 09:58:09,375 | INFO     | process IDs to be killed: [4154097] (in reverse order)
[2025-10-13 05:59:12] 2025-10-13 09:58:09,764 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 05:59:12] 2025-10-13 09:58:09,764 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 05:59:12] 2025-10-13 09:58:09,785 | INFO     | did not find any defunct processes belonging to 4154097
[2025-10-13 05:59:12] 2025-10-13 09:58:09,816 | INFO     | did not find any defunct processes belonging to 4154097
[2025-10-13 05:59:12] 2025-10-13 09:58:09,817 | INFO     | ready for new job
[2025-10-13 05:59:12] 2025-10-13 09:58:09,817 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 05:59:12] 2025-10-13 09:58:09,819 | INFO     | ***************************************
[2025-10-13 05:59:12] 2025-10-13 09:58:09,819 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 05:59:12] 2025-10-13 09:58:09,819 | INFO     | ***************************************
[2025-10-13 05:59:12] 2025-10-13 09:58:09,819 | INFO     | 
[2025-10-13 05:59:12] 2025-10-13 09:58:09,840 | INFO     | architecture information:
[2025-10-13 05:59:12] 2025-10-13 09:58:09,841 | INFO     | executing command: cat /etc/os-release
[2025-10-13 05:59:12] 2025-10-13 09:58:09,915 | INFO     | cat /etc/os-release:
[2025-10-13 05:59:12] NAME="CentOS Linux"
[2025-10-13 05:59:12] VERSION="7 (Core)"
[2025-10-13 05:59:12] ID="centos"
[2025-10-13 05:59:12] ID_LIKE="rhel fedora"
[2025-10-13 05:59:12] VERSION_ID="7"
[2025-10-13 05:59:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 05:59:12] ANSI_COLOR="0;31"
[2025-10-13 05:59:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 05:59:12] HOME_URL="https://www.centos.org/"
[2025-10-13 05:59:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 05:59:12] 
[2025-10-13 05:59:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 05:59:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 05:59:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 05:59:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 05:59:12] 
[2025-10-13 05:59:12] 2025-10-13 09:58:09,915 | INFO     | ***************************************
[2025-10-13 05:59:12] 2025-10-13 09:58:10,419 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-13 05:59:12] 2025-10-13 09:58:10,572 | INFO     | sufficient remaining disk space (94262788096 B)
[2025-10-13 05:59:12] 2025-10-13 09:58:10,572 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 05:59:12] 2025-10-13 09:58:10,573 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 05:59:12] 2025-10-13 09:58:10,573 | INFO     | update_server=False
[2025-10-13 05:59:12] 2025-10-13 09:58:10,573 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 05:59:12] 2025-10-13 09:58:10,574 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 05:59:12] 2025-10-13 09:58:10,574 | INFO     | aborting loop
[2025-10-13 05:59:12] 2025-10-13 09:58:10,590 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 05:59:12] 2025-10-13 09:58:10,627 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 05:59:12] 2025-10-13 09:58:11,225 | INFO     | all data control threads have been joined
[2025-10-13 05:59:12] 2025-10-13 09:58:11,302 | INFO     | all payload control threads have been joined
[2025-10-13 05:59:12] 2025-10-13 09:58:11,553 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 05:59:12] 2025-10-13 09:58:11,579 | INFO     | [job] job monitor thread has finished
[2025-10-13 05:59:12] 2025-10-13 09:58:11,588 | INFO     | [job] retrieve thread has finished
[2025-10-13 05:59:12] 2025-10-13 09:58:11,800 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 05:59:12] 2025-10-13 09:58:11,934 | INFO     | all job control threads have been joined
[2025-10-13 05:59:12] 2025-10-13 09:58:11,941 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 05:59:12] 2025-10-13 09:58:12,231 | INFO     | [data] control thread has finished
[2025-10-13 05:59:12] 2025-10-13 09:58:12,308 | INFO     | [payload] control thread has finished
[2025-10-13 05:59:12] 2025-10-13 09:58:12,478 | INFO     | [data] copytool_in thread has finished
[2025-10-13 05:59:12] 2025-10-13 09:58:12,559 | INFO     | [job] queue monitor thread has finished
[2025-10-13 05:59:12] 2025-10-13 09:58:12,597 | INFO     | [data] copytool_out thread has finished
[2025-10-13 05:59:12] 2025-10-13 09:58:12,870 | INFO     | [job] validate thread has finished
[2025-10-13 05:59:12] 2025-10-13 09:58:12,874 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 05:59:12] 2025-10-13 09:58:12,881 | INFO     | [payload] validate_post thread has finished
[2025-10-13 05:59:12] 2025-10-13 09:58:12,940 | INFO     | [job] control thread has finished
[2025-10-13 05:59:12] 2025-10-13 09:58:12,968 | INFO     | [payload] failed_post thread has finished
[2025-10-13 05:59:12] 2025-10-13 09:58:13,038 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 05:59:12] 2025-10-13 09:58:14,636 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 05:59:12] 2025-10-13 09:58:40,208 | INFO     | PID=4138053 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 05:59:12] 2025-10-13 09:58:40,208 | INFO     | .. there are 48 such processes running
[2025-10-13 05:59:12] 2025-10-13 09:58:40,208 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 05:59:12] 2025-10-13 09:58:40,208 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 05:59:12] 2025-10-13 09:58:40,208 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 05:59:12] 2025-10-13 09:59:04,272 | INFO     | [monitor] cgroup control has ended
[2025-10-13 05:59:12] 2025-10-13 09:59:05,800 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140457300870976)>', '<ExcThread(monitor, started 140456805512960)>']
[2025-10-13 05:59:12] 2025-10-13 09:59:06,372 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 05:59:12] 2025-10-13 09:59:06,372 | INFO     | [monitor] control thread has ended
[2025-10-13 05:59:12] 2025-10-13 09:59:10,844 | INFO     | all workflow threads have been joined
[2025-10-13 05:59:12] 2025-10-13 09:59:10,844 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 05:59:12] 2025-10-13 09:59:10,844 | INFO     | traces error code: 0
[2025-10-13 05:59:12] 2025-10-13 09:59:10,844 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 05:59:12] 2025-10-13 09:59:11,313 [wrapper] ==== pilot stdout END ====
[2025-10-13 05:59:12] 2025-10-13 09:59:11,328 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 05:59:12] 2025-10-13 09:59:11,336 [wrapper] pilotpid: 4138053
[2025-10-13 05:59:12] 2025-10-13 09:59:11,356 [wrapper] Pilot exit status: 0
[2025-10-13 05:59:12] 2025-10-13 09:59:11,441 [wrapper] pandaids: 6840851769
[2025-10-13 05:59:12] 2025-10-13 09:59:11,622 [wrapper] cleanup supervisor_pilot  969087 4138054
[2025-10-13 05:59:12] 2025-10-13 09:59:11,662 [wrapper] Test setup, not cleaning
[2025-10-13 05:59:12] 2025-10-13 09:59:11,698 [wrapper] apfmon messages muted
[2025-10-13 05:59:12] 2025-10-13 09:59:11,712 [wrapper] ==== wrapper stdout END ====
[2025-10-13 05:59:12] 2025-10-13 09:59:11,738 [wrapper] ==== wrapper stderr END ====
[2025-10-13 05:59:12]  *** Error codes and diagnostics ***
[2025-10-13 05:59:12]     "exeErrorCode": 0,
[2025-10-13 05:59:12]     "exeErrorDiag": "",
[2025-10-13 05:59:12]     "pilotErrorCode": 0,
[2025-10-13 05:59:12]     "pilotErrorDiag": "",
[2025-10-13 05:59:12]  *** Listing of results directory ***
[2025-10-13 05:59:12] total 415624
[2025-10-13 05:59:12] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 17:57 pilot3.tar.gz
[2025-10-13 05:59:12] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 18:20 queuedata.json
[2025-10-13 05:59:12] -rwx------. 1 boincer umatlas     36292 Oct 12 18:21 runpilot2-wrapper.sh
[2025-10-13 05:59:12] -rw-r--r--. 1 boincer umatlas       100 Oct 13 01:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 05:59:12] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 01:36 run_atlas
[2025-10-13 05:59:12] -rw-r--r--. 1 boincer umatlas       105 Oct 13 01:36 job.xml
[2025-10-13 05:59:12] -rw-r--r--. 2 boincer umatlas 222834113 Oct 13 01:36 EVNT.46676267._004609.pool.root.1
[2025-10-13 05:59:12] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 01:36 start_atlas.sh
[2025-10-13 05:59:12] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 01:36 shared
[2025-10-13 05:59:12] -rw-r--r--. 2 boincer umatlas    569680 Oct 13 01:36 input.tar.gz
[2025-10-13 05:59:12] -rw-r--r--. 1 boincer umatlas         0 Oct 13 01:36 boinc_lockfile
[2025-10-13 05:59:12] -rw-r--r--. 1 boincer umatlas      2550 Oct 13 01:36 pandaJob.out
[2025-10-13 05:59:12] -rw-------. 1 boincer umatlas    973230 Oct 13 01:37 agis_schedconf.cvmfs.json
[2025-10-13 05:59:12] drwx------. 5 boincer umatlas      4096 Oct 13 01:37 pilot3
[2025-10-13 05:59:12] -rw-------. 1 boincer umatlas 194183737 Oct 13 05:56 HITS.46676269._090948.pool.root.1
[2025-10-13 05:59:12] -rw-r--r--. 1 boincer umatlas       530 Oct 13 05:56 boinc_task_state.xml
[2025-10-13 05:59:12] -rw-------. 1 boincer umatlas      1046 Oct 13 05:57 memory_monitor_summary.json
[2025-10-13 05:59:12] -rw-------. 1 boincer umatlas   1560580 Oct 13 05:57 agis_ddmendpoints.agis.ALL.json
[2025-10-13 05:59:12] -rw-------. 1 boincer umatlas    475430 Oct 13 05:57 log.46676269._090948.job.log.tgz.1
[2025-10-13 05:59:12] -rw-------. 1 boincer umatlas        95 Oct 13 05:57 pilot_heartbeat.json
[2025-10-13 05:59:12] -rw-------. 1 boincer umatlas      7836 Oct 13 05:58 heartbeat.json
[2025-10-13 05:59:12] -rw-r--r--. 1 boincer umatlas      6859 Oct 13 05:58 init_data.xml
[2025-10-13 05:59:12] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 05:59 boinc_mmap_file
[2025-10-13 05:59:12] -rw-r--r--. 1 boincer umatlas        28 Oct 13 05:59 wrapper_checkpoint.txt
[2025-10-13 05:59:12] -rw-------. 1 boincer umatlas      4824 Oct 13 05:59 pilotlog.txt
[2025-10-13 05:59:12] -rw-------. 1 boincer umatlas   1864631 Oct 13 05:59 log.46676269._090948.job.log.1
[2025-10-13 05:59:12] -rw-------. 1 boincer umatlas       357 Oct 13 05:59 output.list
[2025-10-13 05:59:12] -rw-r--r--. 1 boincer umatlas       620 Oct 13 05:59 runtime_log
[2025-10-13 05:59:12] -rw-------. 1 boincer umatlas   2355200 Oct 13 05:59 result.tar.gz
[2025-10-13 05:59:12] -rw-r--r--. 1 boincer umatlas      8704 Oct 13 05:59 runtime_log.err
[2025-10-13 05:59:12] -rw-------. 1 boincer umatlas       655 Oct 13 05:59 jBuLDmhcJS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmJAVMDm13fWHn.diag
[2025-10-13 05:59:12] -rw-r--r--. 1 boincer umatlas     21054 Oct 13 05:59 stderr.txt
[2025-10-13 05:59:12] HITS file was successfully produced:
[2025-10-13 05:59:12] -rw-------. 1 boincer umatlas 194183737 Oct 13 05:56 shared/HITS.pool.root.1
[2025-10-13 05:59:12]  *** Contents of shared directory: ***
[2025-10-13 05:59:12] total 410132
[2025-10-13 05:59:12] -rw-r--r--. 2 boincer umatlas 222834113 Oct 13 01:36 ATLAS.root_0
[2025-10-13 05:59:12] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 01:36 start_atlas.sh
[2025-10-13 05:59:12] -rw-r--r--. 2 boincer umatlas    569680 Oct 13 01:36 input.tar.gz
[2025-10-13 05:59:12] -rw-------. 1 boincer umatlas 194183737 Oct 13 05:56 HITS.pool.root.1
[2025-10-13 05:59:12] -rw-------. 1 boincer umatlas   2355200 Oct 13 05:59 result.tar.gz
05:59:14 (4124140): run_atlas exited; CPU time 44627.264721
05:59:14 (4124140): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN