Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-13 08:33:08 (103612): vboxwrapper version 26210
2025-10-13 08:33:08 (103612): BOINC client version: 8.2.4
2025-10-13 08:33:08 (103612): Detected: VirtualBox VboxManage Interface (Version: 7.2.2)
2025-10-13 08:33:08 (103612): Successfully copied 'init_data.xml' to the shared directory.
2025-10-13 08:33:08 (103612): Create VM. (boinc_c567f60dfc513945, slot#0)
2025-10-13 08:33:08 (103612): Setting Memory Size for VM. (4100MB)
2025-10-13 08:33:09 (103612): Setting CPU Count for VM. (1)
2025-10-13 08:33:09 (103612): Setting Chipset Options for VM.
2025-10-13 08:33:09 (103612): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-13 08:33:09 (103612): Setting Boot Options for VM.
2025-10-13 08:33:09 (103612): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-13 08:33:09 (103612): Enabling VM Network Access.
2025-10-13 08:33:09 (103612): Disabling USB Support for VM.
2025-10-13 08:33:09 (103612): Disabling COM Port Support for VM.
2025-10-13 08:33:09 (103612): Disabling LPT Port Support for VM.
2025-10-13 08:33:09 (103612): Disabling Audio Support for VM.
2025-10-13 08:33:09 (103612): Disabling Clipboard Support for VM.
2025-10-13 08:33:09 (103612): Disabling Drag and Drop Support for VM.
2025-10-13 08:33:09 (103612): Adding storage controller(s) to VM.
2025-10-13 08:33:09 (103612): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-13 08:33:10 (103612): Adding VirtualBox Guest Additions to VM.
2025-10-13 08:33:10 (103612): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-13 08:33:10 (103612): forwarding host port 42817 to guest port 80
2025-10-13 08:33:10 (103612): Enabling remote desktop for VM.
2025-10-13 08:33:10 (103612): Enabling shared directory for VM.
2025-10-13 08:33:11 (103612): Starting VM using VBoxManage interface. (boinc_c567f60dfc513945, slot#0)
2025-10-13 08:33:12 (103612): Successfully started VM. (PID = '104226')
2025-10-13 08:33:12 (103612): Reporting VM Process ID to BOINC.
2025-10-13 08:33:12 (103612): Guest Log: BIOS: VirtualBox 7.2.2
2025-10-13 08:33:12 (103612): Guest Log: CPUID EDX: 0x178bfbff
2025-10-13 08:33:12 (103612): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-10-13 08:33:12 (103612): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-13 08:33:12 (103612): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-13 08:33:12 (103612): Detected: Web Application Enabled (http://localhost:42817)
2025-10-13 08:33:12 (103612): Detected: Remote Desktop Enabled (localhost:59259)
2025-10-13 08:33:12 (103612): Preference change detected
2025-10-13 08:33:12 (103612): Setting CPU throttle for VM. (20%)
2025-10-13 08:33:12 (103612): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 180 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-13 08:33:14 (103612): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-13 08:33:14 (103612): Guest Log: BIOS: Booting from Hard Disk...
2025-10-13 08:33:23 (103612): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-13 08:33:23 (103612): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-13 08:33:23 (103612): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-13 08:33:23 (103612): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-13 08:33:23 (103612): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-13 08:33:23 (103612): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-13 08:33:23 (103612): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-13 08:33:23 (103612): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-13 08:33:23 (103612): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-13 08:33:23 (103612): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-13 08:33:23 (103612): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-13 08:33:23 (103612): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-13 08:33:23 (103612): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-13 08:33:23 (103612): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-13 08:33:23 (103612): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-13 08:33:23 (103612): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-13 08:33:23 (103612): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-13 08:33:23 (103612): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-13 08:33:23 (103612): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-13 08:33:23 (103612): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-13 08:33:23 (103612): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-13 08:33:23 (103612): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-13 08:33:23 (103612): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-13 08:33:23 (103612): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-13 08:33:23 (103612): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-13 08:33:23 (103612): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-13 08:33:23 (103612): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-13 08:33:23 (103612): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-13 08:33:23 (103612): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-13 08:33:23 (103612): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-13 08:33:23 (103612): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-13 08:33:23 (103612): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-13 08:33:36 (103612): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-13 08:33:36 (103612): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-10-13 08:34:13 (103612): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-13 08:34:13 (103612): Guest Log: 00:00:00.000276 main     Log opened 2025-10-13T06:34:11.962626000Z
2025-10-13 08:34:13 (103612): Guest Log: 00:00:00.000497 main     OS Product: Linux
2025-10-13 08:34:13 (103612): Guest Log: 00:00:00.000567 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-13 08:34:13 (103612): Guest Log: 00:00:00.000614 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-13 08:34:13 (103612): Guest Log: 00:00:00.000660 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-13 08:34:13 (103612): Guest Log: 00:00:00.000662 main     Process ID: 1263
2025-10-13 08:34:13 (103612): Guest Log: 00:00:00.000663 main     Package type: LINUX_64BITS_GENERIC
2025-10-13 08:34:13 (103612): Guest Log: 00:00:00.002987 main     5.2.32 r132073 started. Verbose level = 0
2025-10-13 08:34:14 (103612): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-13 08:34:14 (103612): Guest Log: [INFO] Mounting shared directory
2025-10-13 08:34:14 (103612): Guest Log: [INFO] Checking for init_data.xml
2025-10-13 08:34:19 (103612): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-13 08:34:19 (103612): Guest Log: [INFO] Detected branch: prod
2025-10-13 08:34:19 (103612): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-13 08:34:19 (103612): Guest Log: Copying input files
2025-10-13 08:34:26 (103612): Guest Log: Copied input files into RunAtlas.
2025-10-13 08:34:26 (103612): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-10-13 08:34:26 (103612): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-10-13 08:34:26 (103612): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-10-13 08:34:26 (103612): Guest Log: Further information can be found at the LHC@home message board.
2025-10-13 08:34:36 (103612): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-13 08:34:36 (103612): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-13 08:34:36 (103612): Guest Log: 2.6.3.0 1533 0 30064 151651 3 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-10-13 08:34:38 (103612): Guest Log: copied the webapp to /var/www
2025-10-13 08:34:38 (103612): Guest Log: core_number=1
2025-10-13 08:34:39 (103612): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-13 08:34:39 (103612): Guest Log:  *** Starting ATLAS job. (PandaID=6841069077 taskID=46676269) ***
2025-10-13 10:12:13 (103612): Status Report: Elapsed Time: '6000.000000'
2025-10-13 10:12:13 (103612): Status Report: CPU Time: '283.000000'
2025-10-13 10:28:00 (103612): Guest Log:  *** Job finished ***
2025-10-13 10:28:00 (103612): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-13 10:28:00 (103612): Guest Log: 2025-10-13 08:27:22,791 | INFO     | [job] control thread has finished
2025-10-13 10:28:00 (103612): Guest Log: 2025-10-13 08:27:25,981 | INFO     | [data] queue_monitor thread has finished
2025-10-13 10:28:00 (103612): Guest Log: 2025-10-13 08:27:53,119 | INFO     | [monitor] cgroup control has ended
2025-10-13 10:28:00 (103612): Guest Log: 2025-10-13 08:27:54,447 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140230130313024)>', '<ExcThread(monitor, started 140229826549504)>']
2025-10-13 10:28:00 (103612): Guest Log: 2025-10-13 08:27:55,294 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-13 10:28:00 (103612): Guest Log: 2025-10-13 08:27:55,295 | INFO     | [monitor] control thread has ended
2025-10-13 10:28:00 (103612): Guest Log: 2025-10-13 08:27:59,453 | INFO     | all workflow threads have been joined
2025-10-13 10:28:00 (103612): Guest Log: 2025-10-13 08:27:59,454 | INFO     | end of generic workflow (traces error code: 0)
2025-10-13 10:28:00 (103612): Guest Log: 2025-10-13 08:27:59,454 | INFO     | traces error code: 0
2025-10-13 10:28:00 (103612): Guest Log: 2025-10-13 08:27:59,454 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-13 10:28:00 (103612): Guest Log: 2025-10-13 08:27:59,487 [wrapper] ==== pilot stdout END ====
2025-10-13 10:28:00 (103612): Guest Log: 2025-10-13 08:27:59,489 [wrapper] ==== wrapper stdout RESUME ====
2025-10-13 10:28:00 (103612): Guest Log: 2025-10-13 08:27:59,491 [wrapper] pilotpid: 5878
2025-10-13 10:28:00 (103612): Guest Log: 2025-10-13 08:27:59,492 [wrapper] Pilot exit status: 0
2025-10-13 10:28:00 (103612): Guest Log: 2025-10-13 08:27:59,629 [wrapper] pandaids: 6841069077
2025-10-13 10:28:00 (103612): Guest Log: 2025-10-13 08:27:59,698 [wrapper] cleanup supervisor_pilot  4580 5879
2025-10-13 10:28:00 (103612): Guest Log: 2025-10-13 08:27:59,700 [wrapper] Test setup, not cleaning
2025-10-13 10:28:00 (103612): Guest Log: 2025-10-13 08:27:59,701 [wrapper] apfmon messages muted
2025-10-13 10:28:00 (103612): Guest Log: 2025-10-13 08:27:59,703 [wrapper] ==== wrapper stdout END ====
2025-10-13 10:28:00 (103612): Guest Log: 2025-10-13 08:27:59,704 [wrapper] ==== wrapper stderr END ====
2025-10-13 10:28:00 (103612): Guest Log:  *** Error codes and diagnostics ***
2025-10-13 10:28:00 (103612): Guest Log:     "exeErrorCode": 65,
2025-10-13 10:28:00 (103612): Guest Log:     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1); Logfile error in log.EVNTtoHITS: \"GeoModelSvc                                                      FATAL in sysInitialize(): standard std::exception is caught\"",
2025-10-13 10:28:00 (103612): Guest Log:     "pilotErrorCode": 1305,
2025-10-13 10:28:00 (103612): Guest Log:     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1); Logfile error in log.EVNTtoHITS: \"GeoModelSvc                                                      FATAL in sysInitia",
2025-10-13 10:28:00 (103612): Guest Log:  *** Listing of results directory ***
2025-10-13 10:28:01 (103612): Guest Log: total 5884
2025-10-13 10:28:01 (103612): Guest Log: -rw-r--r--. 1 atlas atlas  557409 Oct 13 00:11 pilot3.tar.gz
2025-10-13 10:28:01 (103612): Guest Log: -rw-r--r--. 1 atlas atlas    5112 Oct 13 00:39 queuedata.json
2025-10-13 10:28:01 (103612): Guest Log: -rwx------. 1 atlas atlas   36292 Oct 13 00:39 runpilot2-wrapper.sh
2025-10-13 10:28:01 (103612): Guest Log: -rw-r--r--. 1 atlas atlas  569676 Oct 13 06:34 input.tar.gz
2025-10-13 10:28:01 (103612): Guest Log: -rw-r--r--. 1 atlas atlas   15120 Oct 13 06:34 start_atlas.sh
2025-10-13 10:28:01 (103612): Guest Log: -rw-r--r--. 1 atlas atlas    6205 Oct 13 06:34 init_data.xml
2025-10-13 10:28:01 (103612): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 Oct 13 06:34 EVNT.46676267._004698.pool.root.1 -> /data/./ATLAS.root_0
2025-10-13 10:28:01 (103612): Guest Log: -rw-r--r--. 1 atlas atlas    2550 Oct 13 06:34 pandaJob.out
2025-10-13 10:28:01 (103612): Guest Log: -rw-------. 1 atlas atlas  973230 Oct 13 06:35 agis_schedconf.cvmfs.json
2025-10-13 10:28:01 (103612): Guest Log: -rw-------. 1 atlas atlas 1560580 Oct 13 06:35 agis_ddmendpoints.agis.ALL.json
2025-10-13 10:28:01 (103612): Guest Log: drwx------. 5 atlas atlas    4096 Oct 13 06:35 pilot3
2025-10-13 10:28:01 (103612): Guest Log: -rw-------. 1 atlas atlas    1009 Oct 13 08:25 memory_monitor_summary.json
2025-10-13 10:28:01 (103612): Guest Log: -rw-------. 1 atlas atlas  129670 Oct 13 08:25 log.46676269._093286.job.log.tgz.1
2025-10-13 10:28:01 (103612): Guest Log: -rw-------. 1 atlas atlas      95 Oct 13 08:27 pilot_heartbeat.json
2025-10-13 10:28:01 (103612): Guest Log: -rw-------. 1 atlas atlas   10679 Oct 13 08:27 heartbeat.json
2025-10-13 10:28:01 (103612): Guest Log: -rw-------. 1 atlas atlas    4612 Oct 13 08:27 pilotlog.txt
2025-10-13 10:28:01 (103612): Guest Log: -rw-------. 1 atlas atlas  968005 Oct 13 08:27 log.46676269._093286.job.log.1
2025-10-13 10:28:01 (103612): Guest Log: -rw-r--r--. 1 atlas atlas    8381 Oct 13 08:27 runtime_log.err
2025-10-13 10:28:01 (103612): Guest Log: -rw-r--r--. 1 atlas atlas     620 Oct 13 08:27 runtime_log
2025-10-13 10:28:01 (103612): Guest Log: -rw-------. 1 atlas atlas 1116160 Oct 13 08:27 result.tar.gz
2025-10-13 10:28:01 (103612): Guest Log: -rw-------. 1 atlas atlas     188 Oct 13 08:27 output.list
2025-10-13 10:28:01 (103612): Guest Log: -rw-------. 1 atlas atlas     650 Oct 13 08:27 KPuNDm1lLS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmhDmNDm1O4dCo.diag
2025-10-13 10:28:01 (103612): Guest Log: Looking for outputfile HITS.46676269._093286.pool.root.1
2025-10-13 10:28:01 (103612): Guest Log: No HITS file was produced
2025-10-13 10:28:01 (103612): Guest Log: Successfully finished the ATLAS job!
2025-10-13 10:28:01 (103612): Guest Log: Copying the results back to the shared directory!
2025-10-13 10:28:01 (103612): Guest Log:  *** Contents of shared directory: ***
2025-10-13 10:28:02 (103612): Guest Log: total 217808
2025-10-13 10:28:02 (103612): Guest Log: -rw-r--r--. 1 root root 221311513 Oct 13 06:33 ATLAS.root_0
2025-10-13 10:28:02 (103612): Guest Log: -rw-r--r--. 1 root root      6205 Oct 13 06:33 init_data.xml
2025-10-13 10:28:02 (103612): Guest Log: -rw-r--r--. 1 root root    569676 Oct 13 06:33 input.tar.gz
2025-10-13 10:28:02 (103612): Guest Log: -rw-r--r--. 1 root root   1116160 Oct 13 08:28 result.tar.gz
2025-10-13 10:28:02 (103612): Guest Log: -rw-r--r--. 1 root root     15120 Oct 13 06:33 start_atlas.sh
2025-10-13 10:28:02 (103612): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-13 10:28:02 (103612): VM Completion File Detected.
2025-10-13 10:28:02 (103612): Powering off VM.
2025-10-13 10:28:02 (103612): Successfully stopped VM.
2025-10-13 10:28:02 (103612): Deregistering VM. (boinc_c567f60dfc513945, slot#0)
2025-10-13 10:28:02 (103612): Removing network bandwidth throttle group from VM.
2025-10-13 10:28:02 (103612): Removing VM from VirtualBox.
2025-10-13 10:28:07 (103612): called boinc_finish(0)

</stderr_txt>
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