Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
01:25:05 (1419): wrapper (7.7.26015): starting
01:25:05 (1419): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 01:25:05] Arguments: --nthreads 8
[2025-10-13 01:25:05] Threads: 8
[2025-10-13 01:25:05] Checking for CVMFS
[2025-10-13 01:25:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 01:25:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 01:25:05] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 01:25:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 01:25:05] 2.11.2.0 11495 53917 128620 151650 1 57 17722351 18432000 1833 130560 0 49852179 99.976 2423674 27985 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 01:25:05] CVMFS is ok
[2025-10-13 01:25:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 01:25:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 01:25:05] Further information can be found at the LHC@home message board.
[2025-10-13 01:25:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 01:25:05] Checking for apptainer binary...
[2025-10-13 01:25:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 01:25:05] Running /usr/bin/apptainer --version
[2025-10-13 01:25:05] apptainer version 1.3.2-1.el7
[2025-10-13 01:25:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 01:25:06] c-206-31.aglt2.org
[2025-10-13 01:25:06] apptainer works
[2025-10-13 01:25:06] Set ATHENA_PROC_NUMBER=8
[2025-10-13 01:25:06] Set ATHENA_CORE_NUMBER=8
[2025-10-13 01:25:06] Starting ATLAS job with PandaID=6841069054
[2025-10-13 01:25:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
04:13:58 (9533): wrapper (7.7.26015): starting
04:13:58 (9533): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 04:13:58] Arguments: --nthreads 8
[2025-10-13 04:13:58] Threads: 8
[2025-10-13 04:13:58] This job has been restarted, cleaning up previous attempt
[2025-10-13 04:13:58] Checking for CVMFS
[2025-10-13 04:13:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 04:13:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 04:13:58] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 04:13:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 04:13:58] 2.11.2.0 11495 54086 127476 151653 0 188 17733375 18432001 1 130560 0 50118884 99.977 2427710 27995 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 04:13:58] CVMFS is ok
[2025-10-13 04:13:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 04:13:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 04:13:58] Further information can be found at the LHC@home message board.
[2025-10-13 04:13:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 04:13:58] Checking for apptainer binary...
[2025-10-13 04:13:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 04:13:58] Running /usr/bin/apptainer --version
[2025-10-13 04:13:59] apptainer version 1.3.2-1.el7
[2025-10-13 04:13:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 04:14:00] c-206-31.aglt2.org
[2025-10-13 04:14:00] apptainer works
[2025-10-13 04:14:00] Set ATHENA_PROC_NUMBER=8
[2025-10-13 04:14:00] Set ATHENA_CORE_NUMBER=8
[2025-10-13 04:14:00] Starting ATLAS job with PandaID=6841069054
[2025-10-13 04:14:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 07:20:54]  *** The last 200 lines of the pilot log: ***
[2025-10-13 07:20:54] 2025-10-13 11:20:21,598 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 07:20:54] 2025-10-13 11:20:21,935 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-13 07:20:54] 2025-10-13 11:20:21,941 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 1662.5416666666667
[2025-10-13 07:20:54] 2025-10-13 11:20:21,944 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6841069054/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 07:20:54] 2025-10-13 11:20:21,944 | INFO     | extracted standard info from prmon json
[2025-10-13 07:20:54] 2025-10-13 11:20:21,944 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 07:20:54] 2025-10-13 11:20:21,944 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 07:20:54] 2025-10-13 11:20:21,945 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 07:20:54] 2025-10-13 11:20:21,945 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 07:20:54] 2025-10-13 11:20:21,948 | INFO     | fitting pss+swap vs Time
[2025-10-13 07:20:54] 2025-10-13 11:20:21,948 | INFO     | sum of square deviations: 1900284932.0
[2025-10-13 07:20:54] 2025-10-13 11:20:21,949 | INFO     | sum of deviations: 16747472103.000017
[2025-10-13 07:20:54] 2025-10-13 11:20:21,949 | INFO     | mean x: 1760348829.0
[2025-10-13 07:20:54] 2025-10-13 11:20:21,949 | INFO     | mean y: 2488329.1912568305
[2025-10-13 07:20:54] 2025-10-13 11:20:21,949 | INFO     | -- intersect: -15511707678.350546
[2025-10-13 07:20:54] 2025-10-13 11:20:21,949 | INFO     | intersect: -15511707678.350546
[2025-10-13 07:20:54] 2025-10-13 11:20:21,950 | INFO     | chi2: 1.49210324247524
[2025-10-13 07:20:54] 2025-10-13 11:20:21,950 | INFO     | sum of square deviations: 1748737904.5
[2025-10-13 07:20:54] 2025-10-13 11:20:21,951 | INFO     | sum of deviations: 16150570114.500008
[2025-10-13 07:20:54] 2025-10-13 11:20:21,951 | INFO     | mean x: 1760348676.5
[2025-10-13 07:20:54] 2025-10-13 11:20:21,951 | INFO     | mean y: 2487729.353932584
[2025-10-13 07:20:54] 2025-10-13 11:20:21,951 | INFO     | -- intersect: -16255314341.854357
[2025-10-13 07:20:54] 2025-10-13 11:20:21,951 | INFO     | intersect: -16255314341.854357
[2025-10-13 07:20:54] 2025-10-13 11:20:21,952 | INFO     | chi2: 1.493177885201704
[2025-10-13 07:20:54] 2025-10-13 11:20:21,952 | INFO     | current chi2=1.493177885201704 (change=-0.0720220086567958 %)
[2025-10-13 07:20:54] 2025-10-13 11:20:21,952 | INFO     | right removable region: 177
[2025-10-13 07:20:54] 2025-10-13 11:20:21,952 | INFO     | sum of square deviations: 1748737904.5
[2025-10-13 07:20:54] 2025-10-13 11:20:21,953 | INFO     | sum of deviations: -12118393437.500002
[2025-10-13 07:20:54] 2025-10-13 11:20:21,953 | INFO     | mean x: 1760348981.5
[2025-10-13 07:20:54] 2025-10-13 11:20:21,953 | INFO     | mean y: 2517050.7921348317
[2025-10-13 07:20:54] 2025-10-13 11:20:21,953 | INFO     | -- intersect: 12201372860.015783
[2025-10-13 07:20:54] 2025-10-13 11:20:21,954 | INFO     | intersect: 12201372860.015783
[2025-10-13 07:20:54] 2025-10-13 11:20:21,954 | INFO     | chi2: 0.022636503361863236
[2025-10-13 07:20:54] 2025-10-13 11:20:21,954 | INFO     | current chi2=0.022636503361863236 (change=98.48291306409122 %)
[2025-10-13 07:20:54] 2025-10-13 11:20:21,954 | INFO     | sum of square deviations: 1605470102.0
[2025-10-13 07:20:54] 2025-10-13 11:20:21,955 | INFO     | sum of deviations: -12228320531.000002
[2025-10-13 07:20:54] 2025-10-13 11:20:21,955 | INFO     | mean x: 1760349134.0
[2025-10-13 07:20:54] 2025-10-13 11:20:21,955 | INFO     | mean y: 2517159.450867052
[2025-10-13 07:20:54] 2025-10-13 11:20:21,955 | INFO     | -- intersect: 13410498678.511427
[2025-10-13 07:20:54] 2025-10-13 11:20:21,956 | INFO     | intersect: 13410498678.511427
[2025-10-13 07:20:54] 2025-10-13 11:20:21,956 | INFO     | chi2: 0.020953169015333267
[2025-10-13 07:20:54] 2025-10-13 11:20:21,956 | INFO     | current chi2=0.020953169015333267 (change=7.436370890064057 %)
[2025-10-13 07:20:54] 2025-10-13 11:20:21,956 | INFO     | left removable region: 20
[2025-10-13 07:20:54] 2025-10-13 11:20:21,956 | INFO     | sum of square deviations: 1199940638.0
[2025-10-13 07:20:54] 2025-10-13 11:20:21,957 | INFO     | sum of deviations: -9988232293.0
[2025-10-13 07:20:54] 2025-10-13 11:20:21,957 | INFO     | mean x: 1760349256.0
[2025-10-13 07:20:54] 2025-10-13 11:20:21,957 | INFO     | mean y: 2514980.286624204
[2025-10-13 07:20:54] 2025-10-13 11:20:21,957 | INFO     | -- intersect: 14655554246.498829
[2025-10-13 07:20:54] 2025-10-13 11:20:21,958 | INFO     | intersect: 14655554246.498829
[2025-10-13 07:20:54] 2025-10-13 11:20:21,958 | INFO     | chi2: 0.01973505573251051
[2025-10-13 07:20:54] 2025-10-13 11:20:21,958 | INFO     | -- intersect: 14655554246.498829
[2025-10-13 07:20:54] 2025-10-13 11:20:21,958 | INFO     | current memory leak: -8.32 B/s (using 157 data points, chi2=0.02)
[2025-10-13 07:20:54] 2025-10-13 11:20:21,958 | INFO     | could have reported an average CPU frequency of 2224 MHz (10 samples)
[2025-10-13 07:20:54] 2025-10-13 11:20:21,958 | INFO     | ..............................
[2025-10-13 07:20:54] 2025-10-13 11:20:21,959 | INFO     | . Timing measurements:
[2025-10-13 07:20:54] 2025-10-13 11:20:21,959 | INFO     | . get job = 0 s
[2025-10-13 07:20:54] 2025-10-13 11:20:21,959 | INFO     | . initial setup = 1 s
[2025-10-13 07:20:54] 2025-10-13 11:20:21,959 | INFO     | . payload setup = 6 s
[2025-10-13 07:20:54] 2025-10-13 11:20:21,959 | INFO     | . stage-in = 0 s
[2025-10-13 07:20:54] 2025-10-13 11:20:21,959 | INFO     | . payload execution = 11136 s
[2025-10-13 07:20:54] 2025-10-13 11:20:21,959 | INFO     | . stage-out = 1 s
[2025-10-13 07:20:54] 2025-10-13 11:20:21,959 | INFO     | . log creation = 0 s
[2025-10-13 07:20:54] 2025-10-13 11:20:21,959 | INFO     | ..............................
[2025-10-13 07:20:54] 2025-10-13 11:20:22,041 | INFO     | 
[2025-10-13 07:20:54] 2025-10-13 11:20:22,041 | INFO     | job summary report
[2025-10-13 07:20:54] 2025-10-13 11:20:22,041 | INFO     | --------------------------------------------------
[2025-10-13 07:20:54] 2025-10-13 11:20:22,041 | INFO     | PanDA job id: 6841069054
[2025-10-13 07:20:54] 2025-10-13 11:20:22,041 | INFO     | task id: 46676269
[2025-10-13 07:20:54] 2025-10-13 11:20:22,041 | INFO     | errors: (none)
[2025-10-13 07:20:54] 2025-10-13 11:20:22,042 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 07:20:54] 2025-10-13 11:20:22,042 | INFO     | pilot state: finished 
[2025-10-13 07:20:54] 2025-10-13 11:20:22,042 | INFO     | transexitcode: 0
[2025-10-13 07:20:54] 2025-10-13 11:20:22,042 | INFO     | exeerrorcode: 0
[2025-10-13 07:20:54] 2025-10-13 11:20:22,042 | INFO     | exeerrordiag: 
[2025-10-13 07:20:54] 2025-10-13 11:20:22,042 | INFO     | exitcode: 0
[2025-10-13 07:20:54] 2025-10-13 11:20:22,043 | INFO     | exitmsg: OK
[2025-10-13 07:20:54] 2025-10-13 11:20:22,043 | INFO     | cpuconsumptiontime: 85114 s
[2025-10-13 07:20:54] 2025-10-13 11:20:22,043 | INFO     | nevents: 400
[2025-10-13 07:20:54] 2025-10-13 11:20:22,043 | INFO     | neventsw: 0
[2025-10-13 07:20:54] 2025-10-13 11:20:22,043 | INFO     | pid: 7622
[2025-10-13 07:20:54] 2025-10-13 11:20:22,043 | INFO     | pgrp: 7622
[2025-10-13 07:20:54] 2025-10-13 11:20:22,043 | INFO     | corecount: 8
[2025-10-13 07:20:54] 2025-10-13 11:20:22,044 | INFO     | event service: False
[2025-10-13 07:20:54] 2025-10-13 11:20:22,044 | INFO     | sizes: {0: 2348686, 1: 2348885, 5: 2349147, 11: 2349203, 11145: 2378333, 11146: 2378332, 11148: 2387514, 11149: 2387570, 11154: 2387764}
[2025-10-13 07:20:54] 2025-10-13 11:20:22,044 | INFO     | --------------------------------------------------
[2025-10-13 07:20:54] 2025-10-13 11:20:22,044 | INFO     | 
[2025-10-13 07:20:54] 2025-10-13 11:20:22,044 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-13 07:20:54] 2025-10-13 11:20:22,066 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 07:20:54] 2025-10-13 11:20:22,066 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 07:20:54] 2025-10-13 11:20:22,066 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 07:20:54] 2025-10-13 11:20:22,067 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 07:20:54] 2025-10-13 11:20:22,067 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 07:20:54] 2025-10-13 11:20:22,067 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 07:20:54] 2025-10-13 11:20:22,067 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 07:20:54] 2025-10-13 11:20:22,067 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 07:20:54] 2025-10-13 11:20:22,067 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 07:20:54] 2025-10-13 11:20:22,068 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 07:20:54] 2025-10-13 11:20:22,068 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 07:20:54] 2025-10-13 11:20:22,068 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 07:20:54] 2025-10-13 11:20:22,068 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 07:20:54] 2025-10-13 11:20:22,068 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 07:20:54] 2025-10-13 11:20:22,068 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 07:20:54] 2025-10-13 11:20:22,069 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 07:20:54] 2025-10-13 11:20:22,069 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 07:20:54] 2025-10-13 11:20:22,069 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 07:20:54] 2025-10-13 11:20:22,069 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 07:20:54] 2025-10-13 11:20:22,069 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 07:20:54] 2025-10-13 11:20:22,070 | INFO     | job 6841069054 has completed (purged errors)
[2025-10-13 07:20:54] 2025-10-13 11:20:22,070 | INFO     | overall cleanup function is called
[2025-10-13 07:20:54] 2025-10-13 11:20:23,078 | INFO     | --- collectZombieJob: --- 10, [7622]
[2025-10-13 07:20:54] 2025-10-13 11:20:23,078 | INFO     | zombie collector waiting for pid 7622
[2025-10-13 07:20:54] 2025-10-13 11:20:23,078 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 07:20:54] 2025-10-13 11:20:23,078 | INFO     | collected zombie processes
[2025-10-13 07:20:54] 2025-10-13 11:20:23,078 | INFO     | will attempt to kill all subprocesses of pid=7622
[2025-10-13 07:20:54] 2025-10-13 11:20:23,173 | INFO     | process IDs to be killed: [7622] (in reverse order)
[2025-10-13 07:20:54] 2025-10-13 11:20:23,224 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 07:20:54] 2025-10-13 11:20:23,224 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 07:20:54] 2025-10-13 11:20:23,229 | INFO     | did not find any defunct processes belonging to 7622
[2025-10-13 07:20:54] 2025-10-13 11:20:23,232 | INFO     | did not find any defunct processes belonging to 7622
[2025-10-13 07:20:54] 2025-10-13 11:20:23,232 | INFO     | ready for new job
[2025-10-13 07:20:54] 2025-10-13 11:20:23,232 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 07:20:54] 2025-10-13 11:20:23,234 | INFO     | ***************************************
[2025-10-13 07:20:54] 2025-10-13 11:20:23,234 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 07:20:54] 2025-10-13 11:20:23,234 | INFO     | ***************************************
[2025-10-13 07:20:54] 2025-10-13 11:20:23,234 | INFO     | 
[2025-10-13 07:20:54] 2025-10-13 11:20:23,235 | INFO     | architecture information:
[2025-10-13 07:20:54] 2025-10-13 11:20:23,235 | INFO     | executing command: cat /etc/os-release
[2025-10-13 07:20:54] 2025-10-13 11:20:23,249 | INFO     | cat /etc/os-release:
[2025-10-13 07:20:54] NAME="CentOS Linux"
[2025-10-13 07:20:54] VERSION="7 (Core)"
[2025-10-13 07:20:54] ID="centos"
[2025-10-13 07:20:54] ID_LIKE="rhel fedora"
[2025-10-13 07:20:54] VERSION_ID="7"
[2025-10-13 07:20:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 07:20:54] ANSI_COLOR="0;31"
[2025-10-13 07:20:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 07:20:54] HOME_URL="https://www.centos.org/"
[2025-10-13 07:20:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 07:20:54] 
[2025-10-13 07:20:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 07:20:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 07:20:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 07:20:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 07:20:54] 
[2025-10-13 07:20:54] 2025-10-13 11:20:23,249 | INFO     | ***************************************
[2025-10-13 07:20:54] 2025-10-13 11:20:23,752 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-13 07:20:54] 2025-10-13 11:20:23,768 | INFO     | sufficient remaining disk space (28719448064 B)
[2025-10-13 07:20:54] 2025-10-13 11:20:23,768 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 07:20:54] 2025-10-13 11:20:23,769 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 07:20:54] 2025-10-13 11:20:23,769 | INFO     | update_server=False
[2025-10-13 07:20:54] 2025-10-13 11:20:23,769 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 07:20:54] 2025-10-13 11:20:23,769 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 07:20:54] 2025-10-13 11:20:23,770 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 07:20:54] 2025-10-13 11:20:24,056 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 07:20:54] 2025-10-13 11:20:24,129 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 07:20:54] 2025-10-13 11:20:24,129 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 07:20:54] 2025-10-13 11:20:24,129 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 07:20:54] 2025-10-13 11:20:24,130 | INFO     | will abort loop
[2025-10-13 07:20:54] 2025-10-13 11:20:24,328 | INFO     | all data control threads have been joined
[2025-10-13 07:20:54] 2025-10-13 11:20:24,772 | INFO     | [job] retrieve thread has finished
[2025-10-13 07:20:54] 2025-10-13 11:20:24,775 | INFO     | [job] queue monitor thread has finished
[2025-10-13 07:20:54] 2025-10-13 11:20:24,853 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 07:20:54] 2025-10-13 11:20:25,070 | INFO     | all job control threads have been joined
[2025-10-13 07:20:54] 2025-10-13 11:20:25,135 | INFO     | [job] job monitor thread has finished
[2025-10-13 07:20:54] 2025-10-13 11:20:25,218 | INFO     | all payload control threads have been joined
[2025-10-13 07:20:54] 2025-10-13 11:20:25,333 | INFO     | [data] control thread has finished
[2025-10-13 07:20:54] 2025-10-13 11:20:25,640 | INFO     | [payload] validate_post thread has finished
[2025-10-13 07:20:54] 2025-10-13 11:20:25,861 | INFO     | [payload] failed_post thread has finished
[2025-10-13 07:20:54] 2025-10-13 11:20:25,887 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 07:20:54] 2025-10-13 11:20:25,894 | INFO     | [data] copytool_in thread has finished
[2025-10-13 07:20:54] 2025-10-13 11:20:25,897 | INFO     | [job] validate thread has finished
[2025-10-13 07:20:54] 2025-10-13 11:20:25,898 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 07:20:54] 2025-10-13 11:20:26,062 | INFO     | [data] copytool_out thread has finished
[2025-10-13 07:20:54] 2025-10-13 11:20:26,075 | INFO     | [job] control thread has finished
[2025-10-13 07:20:54] 2025-10-13 11:20:26,222 | INFO     | [payload] control thread has finished
[2025-10-13 07:20:54] 2025-10-13 11:20:27,776 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 07:20:54] 2025-10-13 11:20:29,593 | INFO     | [monitor] cgroup control has ended
[2025-10-13 07:20:54] 2025-10-13 11:20:33,820 | INFO     | job.realtimelogging is not enabled
[2025-10-13 07:20:54] 2025-10-13 11:20:34,825 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 07:20:54] 2025-10-13 11:20:36,867 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140240564193088)>', '<ExcThread(monitor, started 140239976773376)>']
[2025-10-13 07:20:54] 2025-10-13 11:20:41,886 | INFO     | all workflow threads have been joined
[2025-10-13 07:20:54] 2025-10-13 11:20:41,886 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 07:20:54] 2025-10-13 11:20:41,887 | INFO     | traces error code: 0
[2025-10-13 07:20:54] 2025-10-13 11:20:41,887 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 07:20:54] 2025-10-13 11:20:53,935 | INFO     | PID=20713 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-13 07:20:54] 2025-10-13 11:20:53,936 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 07:20:54] 2025-10-13 11:20:53,936 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 07:20:54] 2025-10-13 11:20:53,936 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 07:20:54] 2025-10-13 11:20:53,936 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 07:20:54] 2025-10-13 11:20:53,936 | INFO     | [monitor] control thread has ended
[2025-10-13 07:20:54] 2025-10-13 11:20:54,022 [wrapper] ==== pilot stdout END ====
[2025-10-13 07:20:54] 2025-10-13 11:20:54,026 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 07:20:54] 2025-10-13 11:20:54,029 [wrapper] pilotpid: 20713
[2025-10-13 07:20:54] 2025-10-13 11:20:54,033 [wrapper] Pilot exit status: 0
[2025-10-13 07:20:54] 2025-10-13 11:20:54,045 [wrapper] pandaids: 6841069054 6841069054
[2025-10-13 07:20:54] 2025-10-13 11:20:54,084 [wrapper] cleanup supervisor_pilot  7798 20714
[2025-10-13 07:20:54] 2025-10-13 11:20:54,088 [wrapper] Test setup, not cleaning
[2025-10-13 07:20:54] 2025-10-13 11:20:54,092 [wrapper] apfmon messages muted
[2025-10-13 07:20:54] 2025-10-13 11:20:54,095 [wrapper] ==== wrapper stdout END ====
[2025-10-13 07:20:54] 2025-10-13 11:20:54,099 [wrapper] ==== wrapper stderr END ====
[2025-10-13 07:20:54]  *** Error codes and diagnostics ***
[2025-10-13 07:20:54]     "exeErrorCode": 0,
[2025-10-13 07:20:54]     "exeErrorDiag": "",
[2025-10-13 07:20:54]     "pilotErrorCode": 0,
[2025-10-13 07:20:54]     "pilotErrorDiag": "",
[2025-10-13 07:20:54]  *** Listing of results directory ***
[2025-10-13 07:20:54] total 632352
[2025-10-13 07:20:54] drwx------ 5 boincer umatlas      4096 Oct  7 03:00 pilot3
[2025-10-13 07:20:54] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 20:11 pilot3.tar.gz
[2025-10-13 07:20:54] -rwx------ 1 boincer umatlas     36292 Oct 12 20:37 runpilot2-wrapper.sh
[2025-10-13 07:20:54] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 20:37 queuedata.json
[2025-10-13 07:20:54] -rw-r--r-- 1 boincer umatlas       100 Oct 13 01:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 07:20:54] -rwxr-xr-x 1 boincer umatlas      7986 Oct 13 01:25 run_atlas
[2025-10-13 07:20:54] -rw-r--r-- 1 boincer umatlas       105 Oct 13 01:25 job.xml
[2025-10-13 07:20:54] -rw-r--r-- 3 boincer umatlas 219991849 Oct 13 01:25 EVNT.46676267._004697.pool.root.1
[2025-10-13 07:20:54] -rw-r--r-- 3 boincer umatlas 219991849 Oct 13 01:25 ATLAS.root_0
[2025-10-13 07:20:54] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 01:25 start_atlas.sh
[2025-10-13 07:20:54] drwxrwx--x 2 boincer umatlas      4096 Oct 13 01:25 shared
[2025-10-13 07:20:54] -rw-r--r-- 2 boincer umatlas    569676 Oct 13 01:25 input.tar.gz
[2025-10-13 07:20:54] -rw-r--r-- 1 boincer umatlas         0 Oct 13 01:25 boinc_lockfile
[2025-10-13 07:20:54] -rw-r--r-- 1 boincer umatlas      2550 Oct 13 04:14 pandaJob.out
[2025-10-13 07:20:54] -rw------- 1 boincer umatlas    972849 Oct 13 04:14 agis_schedconf.cvmfs.json
[2025-10-13 07:20:54] -rw-r--r-- 1 boincer umatlas      5952 Oct 13 07:18 init_data.xml
[2025-10-13 07:20:54] -rw------- 1 boincer umatlas 199688958 Oct 13 07:19 HITS.46676269._093263.pool.root.1
[2025-10-13 07:20:54] -rw-r--r-- 1 boincer umatlas       531 Oct 13 07:19 boinc_task_state.xml
[2025-10-13 07:20:54] -rw------- 1 boincer umatlas      1054 Oct 13 07:20 memory_monitor_summary.json
[2025-10-13 07:20:54] -rw------- 1 boincer umatlas        96 Oct 13 07:20 pilot_heartbeat.json
[2025-10-13 07:20:54] -rw------- 1 boincer umatlas   1560580 Oct 13 07:20 agis_ddmendpoints.agis.ALL.json
[2025-10-13 07:20:54] -rw------- 1 boincer umatlas    419827 Oct 13 07:20 log.46676269._093263.job.log.tgz.1
[2025-10-13 07:20:54] -rw-r--r-- 1 boincer umatlas      8192 Oct 13 07:20 boinc_mmap_file
[2025-10-13 07:20:54] -rw-r--r-- 1 boincer umatlas        29 Oct 13 07:20 wrapper_checkpoint.txt
[2025-10-13 07:20:54] -rw------- 1 boincer umatlas      7859 Oct 13 07:20 heartbeat.json
[2025-10-13 07:20:54] -rw------- 1 boincer umatlas       745 Oct 13 07:20 pilotlog.txt
[2025-10-13 07:20:54] -rw------- 1 boincer umatlas   1562242 Oct 13 07:20 log.46676269._093263.job.log.1
[2025-10-13 07:20:54] -rw------- 1 boincer umatlas       357 Oct 13 07:20 output.list
[2025-10-13 07:20:54] -rw-r--r-- 1 boincer umatlas       620 Oct 13 07:20 runtime_log
[2025-10-13 07:20:54] -rw------- 1 boincer umatlas   1996800 Oct 13 07:20 result.tar.gz
[2025-10-13 07:20:54] -rw-r--r-- 1 boincer umatlas      8789 Oct 13 07:20 runtime_log.err
[2025-10-13 07:20:54] -rw------- 1 boincer umatlas       787 Oct 13 07:20 LEqLDmekLS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm3CmNDmaSk92n.diag
[2025-10-13 07:20:54] -rw-r--r-- 1 boincer umatlas     23274 Oct 13 07:20 stderr.txt
[2025-10-13 07:20:54] HITS file was successfully produced:
[2025-10-13 07:20:54] -rw------- 1 boincer umatlas 199688958 Oct 13 07:19 shared/HITS.pool.root.1
[2025-10-13 07:20:54]  *** Contents of shared directory: ***
[2025-10-13 07:20:54] total 412380
[2025-10-13 07:20:54] -rw-r--r-- 3 boincer umatlas 219991849 Oct 13 01:25 ATLAS.root_0
[2025-10-13 07:20:54] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 01:25 start_atlas.sh
[2025-10-13 07:20:54] -rw-r--r-- 2 boincer umatlas    569676 Oct 13 01:25 input.tar.gz
[2025-10-13 07:20:54] -rw------- 1 boincer umatlas 199688958 Oct 13 07:19 HITS.pool.root.1
[2025-10-13 07:20:54] -rw------- 1 boincer umatlas   1996800 Oct 13 07:20 result.tar.gz
07:20:55 (9533): run_atlas exited; CPU time 85230.720594
07:20:55 (9533): called boinc_finish(0)

</stderr_txt>
]]>

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