Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
03:12:24 (2935318): wrapper (7.7.26015): starting
03:12:24 (2935318): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 03:12:24] Arguments: --nthreads 8
[2025-10-13 03:12:24] Threads: 8
[2025-10-13 03:12:24] Checking for CVMFS
[2025-10-13 03:12:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 03:12:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 03:12:24] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 03:12:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 03:12:25] 2.13.2.0 5032 6804 156068 151652 1 295 32756687 40960001 35508 16776704 0 31649044 99.742 20048829 26217 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 03:12:25] CVMFS is ok
[2025-10-13 03:12:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 03:12:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 03:12:25] Further information can be found at the LHC@home message board.
[2025-10-13 03:12:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 03:12:25] Checking for apptainer binary...
[2025-10-13 03:12:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 03:12:25] Running /usr/bin/apptainer --version
[2025-10-13 03:12:25] apptainer version 1.4.3-1.el9
[2025-10-13 03:12:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 03:12:25] c-212-10.aglt2.org
[2025-10-13 03:12:25] apptainer works
[2025-10-13 03:12:25] Set ATHENA_PROC_NUMBER=8
[2025-10-13 03:12:25] Set ATHENA_CORE_NUMBER=8
[2025-10-13 03:12:25] Starting ATLAS job with PandaID=6841069259
[2025-10-13 03:12:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 08:48:07]  *** The last 200 lines of the pilot log: ***
[2025-10-13 08:48:07] 2025-10-13 12:47:09,521 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 08:48:07] 2025-10-13 12:47:09,522 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 08:48:07] 2025-10-13 12:47:09,522 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 08:48:07] 2025-10-13 12:47:09,527 | INFO     | fitting pss+swap vs Time
[2025-10-13 08:48:07] 2025-10-13 12:47:09,528 | INFO     | sum of square deviations: 10842405226.422003
[2025-10-13 08:48:07] 2025-10-13 12:47:09,530 | INFO     | sum of deviations: 44513087190.22014
[2025-10-13 08:48:07] 2025-10-13 12:47:09,530 | INFO     | mean x: 1760349637.2568808
[2025-10-13 08:48:07] 2025-10-13 12:47:09,530 | INFO     | mean y: 2468822.5688073393
[2025-10-13 08:48:07] 2025-10-13 12:47:09,530 | INFO     | -- intersect: -7224580457.74538
[2025-10-13 08:48:07] 2025-10-13 12:47:09,530 | INFO     | intersect: -7224580457.74538
[2025-10-13 08:48:07] 2025-10-13 12:47:09,531 | INFO     | chi2: 5.2382307098038945
[2025-10-13 08:48:07] 2025-10-13 12:47:09,531 | INFO     | sum of square deviations: 10352605267.617987
[2025-10-13 08:48:07] 2025-10-13 12:47:09,534 | INFO     | sum of deviations: 84384272851.0311
[2025-10-13 08:48:07] 2025-10-13 12:47:09,534 | INFO     | mean x: 1760349484.7546585
[2025-10-13 08:48:07] 2025-10-13 12:47:09,534 | INFO     | mean y: 2481119.645962733
[2025-10-13 08:48:07] 2025-10-13 12:47:09,534 | INFO     | -- intersect: -14346159381.440945
[2025-10-13 08:48:07] 2025-10-13 12:47:09,534 | INFO     | intersect: -14346159381.440945
[2025-10-13 08:48:07] 2025-10-13 12:47:09,534 | INFO     | chi2: 3.8956304004027484
[2025-10-13 08:48:07] 2025-10-13 12:47:09,534 | INFO     | current chi2=3.8956304004027484 (change=25.630797568505905 %)
[2025-10-13 08:48:07] 2025-10-13 12:47:09,535 | INFO     | sum of square deviations: 9877801854.302824
[2025-10-13 08:48:07] 2025-10-13 12:47:09,537 | INFO     | sum of deviations: 83162791017.49213
[2025-10-13 08:48:07] 2025-10-13 12:47:09,537 | INFO     | mean x: 1760349332.2555206
[2025-10-13 08:48:07] 2025-10-13 12:47:09,537 | INFO     | mean y: 2480727.2902208203
[2025-10-13 08:48:07] 2025-10-13 12:47:09,538 | INFO     | -- intersect: -14818181379.064644
[2025-10-13 08:48:07] 2025-10-13 12:47:09,538 | INFO     | intersect: -14818181379.064644
[2025-10-13 08:48:07] 2025-10-13 12:47:09,538 | INFO     | chi2: 3.89792939464578
[2025-10-13 08:48:07] 2025-10-13 12:47:09,538 | INFO     | current chi2=3.89792939464578 (change=-0.05901469099311662 %)
[2025-10-13 08:48:07] 2025-10-13 12:47:09,538 | INFO     | right removable region: 316
[2025-10-13 08:48:07] 2025-10-13 12:47:09,539 | INFO     | sum of square deviations: 10352593678.586927
[2025-10-13 08:48:07] 2025-10-13 12:47:09,541 | INFO     | sum of deviations: -49556787900.23914
[2025-10-13 08:48:07] 2025-10-13 12:47:09,541 | INFO     | mean x: 1760349789.7608695
[2025-10-13 08:48:07] 2025-10-13 12:47:09,541 | INFO     | mean y: 2498078.854037267
[2025-10-13 08:48:07] 2025-10-13 12:47:09,541 | INFO     | -- intersect: 8429109213.206737
[2025-10-13 08:48:07] 2025-10-13 12:47:09,541 | INFO     | intersect: 8429109213.206737
[2025-10-13 08:48:07] 2025-10-13 12:47:09,542 | INFO     | chi2: 2.104405781441548
[2025-10-13 08:48:07] 2025-10-13 12:47:09,542 | INFO     | current chi2=2.104405781441548 (change=59.82601954696395 %)
[2025-10-13 08:48:07] 2025-10-13 12:47:09,542 | INFO     | sum of square deviations: 9877759155.741247
[2025-10-13 08:48:07] 2025-10-13 12:47:09,544 | INFO     | sum of deviations: -79221748510.05676
[2025-10-13 08:48:07] 2025-10-13 12:47:09,544 | INFO     | mean x: 1760349942.2649841
[2025-10-13 08:48:07] 2025-10-13 12:47:09,545 | INFO     | mean y: 2507574.643533123
[2025-10-13 08:48:07] 2025-10-13 12:47:09,545 | INFO     | -- intersect: 14120891938.64702
[2025-10-13 08:48:07] 2025-10-13 12:47:09,545 | INFO     | intersect: 14120891938.64702
[2025-10-13 08:48:07] 2025-10-13 12:47:09,545 | INFO     | chi2: 1.7139019312720931
[2025-10-13 08:48:07] 2025-10-13 12:47:09,545 | INFO     | current chi2=1.7139019312720931 (change=18.55649008443392 %)
[2025-10-13 08:48:07] 2025-10-13 12:47:09,545 | INFO     | left removable region: 20
[2025-10-13 08:48:07] 2025-10-13 12:47:09,546 | INFO     | sum of square deviations: 8041811225.834457
[2025-10-13 08:48:07] 2025-10-13 12:47:09,548 | INFO     | sum of deviations: -52853803952.79724
[2025-10-13 08:48:07] 2025-10-13 12:47:09,548 | INFO     | mean x: 1760349911.7736487
[2025-10-13 08:48:07] 2025-10-13 12:47:09,548 | INFO     | mean y: 2526576.256756757
[2025-10-13 08:48:07] 2025-10-13 12:47:09,551 | INFO     | -- intersect: 11572207399.690155
[2025-10-13 08:48:07] 2025-10-13 12:47:09,551 | INFO     | intersect: 11572207399.690155
[2025-10-13 08:48:07] 2025-10-13 12:47:09,551 | INFO     | chi2: 0.2387094527299355
[2025-10-13 08:48:07] 2025-10-13 12:47:09,551 | INFO     | -- intersect: 11572207399.690155
[2025-10-13 08:48:07] 2025-10-13 12:47:09,551 | INFO     | current memory leak: -6.57 B/s (using 296 data points, chi2=0.24)
[2025-10-13 08:48:07] 2025-10-13 12:47:09,552 | INFO     | could have reported an average CPU frequency of 3006 MHz (14 samples)
[2025-10-13 08:48:07] 2025-10-13 12:47:09,552 | INFO     | ..............................
[2025-10-13 08:48:07] 2025-10-13 12:47:09,552 | INFO     | . Timing measurements:
[2025-10-13 08:48:07] 2025-10-13 12:47:09,552 | INFO     | . get job = 0 s
[2025-10-13 08:48:07] 2025-10-13 12:47:09,552 | INFO     | . initial setup = 6 s
[2025-10-13 08:48:07] 2025-10-13 12:47:09,552 | INFO     | . payload setup = 19 s
[2025-10-13 08:48:07] 2025-10-13 12:47:09,552 | INFO     | . stage-in = 0 s
[2025-10-13 08:48:07] 2025-10-13 12:47:09,553 | INFO     | . payload execution = 19916 s
[2025-10-13 08:48:07] 2025-10-13 12:47:09,553 | INFO     | . stage-out = 4 s
[2025-10-13 08:48:07] 2025-10-13 12:47:09,553 | INFO     | . log creation = 0 s
[2025-10-13 08:48:07] 2025-10-13 12:47:09,553 | INFO     | ..............................
[2025-10-13 08:48:07] 2025-10-13 12:47:09,657 | INFO     | 
[2025-10-13 08:48:07] 2025-10-13 12:47:09,657 | INFO     | job summary report
[2025-10-13 08:48:07] 2025-10-13 12:47:09,658 | INFO     | --------------------------------------------------
[2025-10-13 08:48:07] 2025-10-13 12:47:09,658 | INFO     | PanDA job id: 6841069259
[2025-10-13 08:48:07] 2025-10-13 12:47:09,658 | INFO     | task id: 46676269
[2025-10-13 08:48:07] 2025-10-13 12:47:09,658 | INFO     | errors: (none)
[2025-10-13 08:48:07] 2025-10-13 12:47:09,658 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 08:48:07] 2025-10-13 12:47:09,658 | INFO     | pilot state: finished 
[2025-10-13 08:48:07] 2025-10-13 12:47:09,658 | INFO     | transexitcode: 0
[2025-10-13 08:48:07] 2025-10-13 12:47:09,658 | INFO     | exeerrorcode: 0
[2025-10-13 08:48:07] 2025-10-13 12:47:09,658 | INFO     | exeerrordiag: 
[2025-10-13 08:48:07] 2025-10-13 12:47:09,658 | INFO     | exitcode: 0
[2025-10-13 08:48:07] 2025-10-13 12:47:09,658 | INFO     | exitmsg: OK
[2025-10-13 08:48:07] 2025-10-13 12:47:09,658 | INFO     | cpuconsumptiontime: 36451 s
[2025-10-13 08:48:07] 2025-10-13 12:47:09,658 | INFO     | nevents: 400
[2025-10-13 08:48:07] 2025-10-13 12:47:09,659 | INFO     | neventsw: 0
[2025-10-13 08:48:07] 2025-10-13 12:47:09,659 | INFO     | pid: 2946122
[2025-10-13 08:48:07] 2025-10-13 12:47:09,659 | INFO     | pgrp: 2946122
[2025-10-13 08:48:07] 2025-10-13 12:47:09,659 | INFO     | corecount: 8
[2025-10-13 08:48:07] 2025-10-13 12:47:09,659 | INFO     | event service: False
[2025-10-13 08:48:07] 2025-10-13 12:47:09,659 | INFO     | sizes: {0: 2348630, 1: 2348885, 12: 2348885, 23: 2348913, 30: 2349203, 34: 2349231, 19941: 2382680, 19942: 2382679, 19948: 2391733, 19951: 2391789, 19973: 2391983}
[2025-10-13 08:48:07] 2025-10-13 12:47:09,659 | INFO     | --------------------------------------------------
[2025-10-13 08:48:07] 2025-10-13 12:47:09,659 | INFO     | 
[2025-10-13 08:48:07] 2025-10-13 12:47:09,659 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 08:48:07] 2025-10-13 12:47:09,759 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 08:48:07] 2025-10-13 12:47:09,760 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 08:48:07] 2025-10-13 12:47:09,760 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 08:48:07] 2025-10-13 12:47:09,760 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 08:48:07] 2025-10-13 12:47:09,760 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 08:48:07] 2025-10-13 12:47:09,760 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 08:48:07] 2025-10-13 12:47:09,760 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 08:48:07] 2025-10-13 12:47:09,760 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 08:48:07] 2025-10-13 12:47:09,760 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 08:48:07] 2025-10-13 12:47:09,760 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 08:48:07] 2025-10-13 12:47:09,761 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 08:48:07] 2025-10-13 12:47:09,761 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 08:48:07] 2025-10-13 12:47:09,761 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 08:48:07] 2025-10-13 12:47:09,761 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 08:48:07] 2025-10-13 12:47:09,761 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 08:48:07] 2025-10-13 12:47:09,761 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 08:48:07] 2025-10-13 12:47:09,761 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 08:48:07] 2025-10-13 12:47:09,761 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 08:48:07] 2025-10-13 12:47:09,761 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 08:48:07] 2025-10-13 12:47:09,761 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 08:48:07] 2025-10-13 12:47:09,762 | INFO     | job 6841069259 has completed (purged errors)
[2025-10-13 08:48:07] 2025-10-13 12:47:09,762 | INFO     | overall cleanup function is called
[2025-10-13 08:48:07] 2025-10-13 12:47:10,774 | INFO     | --- collectZombieJob: --- 10, [2946122]
[2025-10-13 08:48:07] 2025-10-13 12:47:10,774 | INFO     | zombie collector waiting for pid 2946122
[2025-10-13 08:48:07] 2025-10-13 12:47:10,775 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 08:48:07] 2025-10-13 12:47:10,775 | INFO     | collected zombie processes
[2025-10-13 08:48:07] 2025-10-13 12:47:10,775 | INFO     | will attempt to kill all subprocesses of pid=2946122
[2025-10-13 08:48:07] 2025-10-13 12:47:12,341 | INFO     | process IDs to be killed: [2946122] (in reverse order)
[2025-10-13 08:48:07] 2025-10-13 12:47:12,785 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 08:48:07] 2025-10-13 12:47:12,786 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 08:48:07] 2025-10-13 12:47:12,803 | INFO     | did not find any defunct processes belonging to 2946122
[2025-10-13 08:48:07] 2025-10-13 12:47:12,821 | INFO     | did not find any defunct processes belonging to 2946122
[2025-10-13 08:48:07] 2025-10-13 12:47:12,822 | INFO     | ready for new job
[2025-10-13 08:48:07] 2025-10-13 12:47:12,822 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 08:48:07] 2025-10-13 12:47:12,825 | INFO     | ***************************************
[2025-10-13 08:48:07] 2025-10-13 12:47:12,825 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 08:48:07] 2025-10-13 12:47:12,826 | INFO     | ***************************************
[2025-10-13 08:48:07] 2025-10-13 12:47:12,826 | INFO     | 
[2025-10-13 08:48:07] 2025-10-13 12:47:12,851 | INFO     | architecture information:
[2025-10-13 08:48:07] 2025-10-13 12:47:12,865 | INFO     | executing command: cat /etc/os-release
[2025-10-13 08:48:07] 2025-10-13 12:47:12,980 | INFO     | cat /etc/os-release:
[2025-10-13 08:48:07] NAME="CentOS Linux"
[2025-10-13 08:48:07] VERSION="7 (Core)"
[2025-10-13 08:48:07] ID="centos"
[2025-10-13 08:48:07] ID_LIKE="rhel fedora"
[2025-10-13 08:48:07] VERSION_ID="7"
[2025-10-13 08:48:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 08:48:07] ANSI_COLOR="0;31"
[2025-10-13 08:48:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 08:48:07] HOME_URL="https://www.centos.org/"
[2025-10-13 08:48:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 08:48:07] 
[2025-10-13 08:48:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 08:48:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 08:48:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 08:48:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 08:48:07] 
[2025-10-13 08:48:07] 2025-10-13 12:47:12,980 | INFO     | ***************************************
[2025-10-13 08:48:07] 2025-10-13 12:47:13,483 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 08:48:07] 2025-10-13 12:47:13,643 | INFO     | sufficient remaining disk space (128025886720 B)
[2025-10-13 08:48:07] 2025-10-13 12:47:13,643 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 08:48:07] 2025-10-13 12:47:13,643 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 08:48:07] 2025-10-13 12:47:13,643 | INFO     | update_server=False
[2025-10-13 08:48:07] 2025-10-13 12:47:13,643 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 08:48:07] 2025-10-13 12:47:13,643 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 08:48:07] 2025-10-13 12:47:13,864 | INFO     | all payload control threads have been joined
[2025-10-13 08:48:07] 2025-10-13 12:47:13,888 | INFO     | all data control threads have been joined
[2025-10-13 08:48:07] 2025-10-13 12:47:14,313 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 08:48:07] 2025-10-13 12:47:14,314 | INFO     | aborting loop
[2025-10-13 08:48:07] 2025-10-13 12:47:14,539 | INFO     | all job control threads have been joined
[2025-10-13 08:48:07] 2025-10-13 12:47:14,648 | INFO     | [job] retrieve thread has finished
[2025-10-13 08:48:07] 2025-10-13 12:47:14,663 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 08:48:07] 2025-10-13 12:47:14,870 | INFO     | [payload] control thread has finished
[2025-10-13 08:48:07] 2025-10-13 12:47:14,894 | INFO     | [data] control thread has finished
[2025-10-13 08:48:07] 2025-10-13 12:47:15,260 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 08:48:07] 2025-10-13 12:47:15,264 | INFO     | [data] copytool_in thread has finished
[2025-10-13 08:48:07] 2025-10-13 12:47:15,319 | INFO     | [job] job monitor thread has finished
[2025-10-13 08:48:07] 2025-10-13 12:47:15,395 | INFO     | [payload] failed_post thread has finished
[2025-10-13 08:48:07] 2025-10-13 12:47:15,410 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 08:48:07] 2025-10-13 12:47:15,545 | INFO     | [job] control thread has finished
[2025-10-13 08:48:07] 2025-10-13 12:47:15,654 | INFO     | [data] copytool_out thread has finished
[2025-10-13 08:48:07] 2025-10-13 12:47:15,669 | INFO     | [job] queue monitor thread has finished
[2025-10-13 08:48:07] 2025-10-13 12:47:15,810 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 08:48:07] 2025-10-13 12:47:15,880 | INFO     | [job] validate thread has finished
[2025-10-13 08:48:07] 2025-10-13 12:47:15,957 | INFO     | [payload] validate_post thread has finished
[2025-10-13 08:48:07] 2025-10-13 12:47:16,082 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 08:48:07] 2025-10-13 12:47:16,715 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 08:48:07] 2025-10-13 12:47:20,735 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 08:48:07] 2025-10-13 12:47:45,170 | INFO     | PID=2939340 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 08:48:07] 2025-10-13 12:47:45,170 | INFO     | .. there are 29 such processes running
[2025-10-13 08:48:07] 2025-10-13 12:47:45,170 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 08:48:07] 2025-10-13 12:47:45,170 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 08:48:07] 2025-10-13 12:47:45,170 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 08:48:07] 2025-10-13 12:48:01,677 | INFO     | [monitor] cgroup control has ended
[2025-10-13 08:48:07] 2025-10-13 12:48:01,959 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140288483108672)>', '<ExcThread(monitor, started 140288211261184)>']
[2025-10-13 08:48:07] 2025-10-13 12:48:02,290 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 08:48:07] 2025-10-13 12:48:02,290 | INFO     | [monitor] control thread has ended
[2025-10-13 08:48:07] 2025-10-13 12:48:06,985 | INFO     | all workflow threads have been joined
[2025-10-13 08:48:07] 2025-10-13 12:48:06,985 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 08:48:07] 2025-10-13 12:48:06,986 | INFO     | traces error code: 0
[2025-10-13 08:48:07] 2025-10-13 12:48:07,002 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 08:48:07] 2025-10-13 12:48:07,457 [wrapper] ==== pilot stdout END ====
[2025-10-13 08:48:07] 2025-10-13 12:48:07,459 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 08:48:07] 2025-10-13 12:48:07,462 [wrapper] pilotpid: 2939340
[2025-10-13 08:48:07] 2025-10-13 12:48:07,464 [wrapper] Pilot exit status: 0
[2025-10-13 08:48:07] 2025-10-13 12:48:07,482 [wrapper] pandaids: 6841069259
[2025-10-13 08:48:07] 2025-10-13 12:48:07,575 [wrapper] cleanup supervisor_pilot 3875737 2939341
[2025-10-13 08:48:07] 2025-10-13 12:48:07,578 [wrapper] Test setup, not cleaning
[2025-10-13 08:48:07] 2025-10-13 12:48:07,581 [wrapper] apfmon messages muted
[2025-10-13 08:48:07] 2025-10-13 12:48:07,584 [wrapper] ==== wrapper stdout END ====
[2025-10-13 08:48:07] 2025-10-13 12:48:07,587 [wrapper] ==== wrapper stderr END ====
[2025-10-13 08:48:07]  *** Error codes and diagnostics ***
[2025-10-13 08:48:07]     "exeErrorCode": 0,
[2025-10-13 08:48:07]     "exeErrorDiag": "",
[2025-10-13 08:48:07]     "pilotErrorCode": 0,
[2025-10-13 08:48:07]     "pilotErrorDiag": "",
[2025-10-13 08:48:07]  *** Listing of results directory ***
[2025-10-13 08:48:07] total 416720
[2025-10-13 08:48:07] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 20:11 pilot3.tar.gz
[2025-10-13 08:48:07] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 20:43 queuedata.json
[2025-10-13 08:48:07] -rwx------. 1 boincer umatlas     36292 Oct 12 20:44 runpilot2-wrapper.sh
[2025-10-13 08:48:07] -rw-r--r--. 1 boincer umatlas       100 Oct 13 03:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 08:48:07] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 03:12 run_atlas
[2025-10-13 08:48:07] -rw-r--r--. 1 boincer umatlas       105 Oct 13 03:12 job.xml
[2025-10-13 08:48:07] -rw-r--r--. 2 boincer umatlas 223337953 Oct 13 03:12 EVNT.46676267._004702.pool.root.1
[2025-10-13 08:48:07] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 03:12 start_atlas.sh
[2025-10-13 08:48:07] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 03:12 shared
[2025-10-13 08:48:07] -rw-r--r--. 2 boincer umatlas    569679 Oct 13 03:12 input.tar.gz
[2025-10-13 08:48:07] -rw-r--r--. 1 boincer umatlas         0 Oct 13 03:12 boinc_lockfile
[2025-10-13 08:48:07] -rw-r--r--. 1 boincer umatlas      2550 Oct 13 03:12 pandaJob.out
[2025-10-13 08:48:07] -rw-------. 1 boincer umatlas    972849 Oct 13 03:13 agis_schedconf.cvmfs.json
[2025-10-13 08:48:07] drwx------. 5 boincer umatlas      4096 Oct 13 03:13 pilot3
[2025-10-13 08:48:07] -rw-r--r--. 1 boincer umatlas      6946 Oct 13 08:39 init_data.xml
[2025-10-13 08:48:07] -rw-------. 1 boincer umatlas 193046501 Oct 13 08:44 HITS.46676269._093391.pool.root.1
[2025-10-13 08:48:07] -rw-r--r--. 1 boincer umatlas       530 Oct 13 08:44 boinc_task_state.xml
[2025-10-13 08:48:07] -rw-------. 1 boincer umatlas      1050 Oct 13 08:46 memory_monitor_summary.json
[2025-10-13 08:48:07] -rw-------. 1 boincer umatlas   1560580 Oct 13 08:46 agis_ddmendpoints.agis.ALL.json
[2025-10-13 08:48:07] -rw-------. 1 boincer umatlas    541172 Oct 13 08:46 log.46676269._093391.job.log.tgz.1
[2025-10-13 08:48:07] -rw-------. 1 boincer umatlas        95 Oct 13 08:46 pilot_heartbeat.json
[2025-10-13 08:48:07] -rw-------. 1 boincer umatlas      7811 Oct 13 08:47 heartbeat.json
[2025-10-13 08:48:07] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 08:48 boinc_mmap_file
[2025-10-13 08:48:07] -rw-------. 1 boincer umatlas      4825 Oct 13 08:48 pilotlog.txt
[2025-10-13 08:48:07] -rw-r--r--. 1 boincer umatlas        28 Oct 13 08:48 wrapper_checkpoint.txt
[2025-10-13 08:48:07] -rw-------. 1 boincer umatlas   2675396 Oct 13 08:48 log.46676269._093391.job.log.1
[2025-10-13 08:48:07] -rw-------. 1 boincer umatlas       357 Oct 13 08:48 output.list
[2025-10-13 08:48:07] -rw-r--r--. 1 boincer umatlas       620 Oct 13 08:48 runtime_log
[2025-10-13 08:48:07] -rw-------. 1 boincer umatlas   3235840 Oct 13 08:48 result.tar.gz
[2025-10-13 08:48:07] -rw-r--r--. 1 boincer umatlas      8704 Oct 13 08:48 runtime_log.err
[2025-10-13 08:48:07] -rw-------. 1 boincer umatlas       661 Oct 13 08:48 ksoLDmuqLS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmUPVMDmObFcnm.diag
[2025-10-13 08:48:07] -rw-r--r--. 1 boincer umatlas     21021 Oct 13 08:48 stderr.txt
[2025-10-13 08:48:07] HITS file was successfully produced:
[2025-10-13 08:48:07] -rw-------. 1 boincer umatlas 193046501 Oct 13 08:44 shared/HITS.pool.root.1
[2025-10-13 08:48:07]  *** Contents of shared directory: ***
[2025-10-13 08:48:07] total 410372
[2025-10-13 08:48:07] -rw-r--r--. 2 boincer umatlas 223337953 Oct 13 03:12 ATLAS.root_0
[2025-10-13 08:48:07] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 03:12 start_atlas.sh
[2025-10-13 08:48:07] -rw-r--r--. 2 boincer umatlas    569679 Oct 13 03:12 input.tar.gz
[2025-10-13 08:48:07] -rw-------. 1 boincer umatlas 193046501 Oct 13 08:44 HITS.pool.root.1
[2025-10-13 08:48:07] -rw-------. 1 boincer umatlas   3235840 Oct 13 08:48 result.tar.gz
08:48:09 (2935318): run_atlas exited; CPU time 37174.012775
08:48:09 (2935318): called boinc_finish(0)

</stderr_txt>
]]>

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