Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
01:16:11 (20260): wrapper (7.7.26015): starting
01:16:11 (20260): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 01:16:11] Arguments: --nthreads 8
[2025-10-13 01:16:11] Threads: 8
[2025-10-13 01:16:11] Checking for CVMFS
[2025-10-13 01:16:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 01:16:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 01:16:12] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 01:16:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 01:16:12] 2.11.2.0 2756 9509 75224 151650 1 56 15523264 20275200 1 130560 0 6517099 99.990 318753 38834 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 01:16:12] CVMFS is ok
[2025-10-13 01:16:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 01:16:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 01:16:12] Further information can be found at the LHC@home message board.
[2025-10-13 01:16:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 01:16:12] Checking for apptainer binary...
[2025-10-13 01:16:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 01:16:12] Running /usr/bin/apptainer --version
[2025-10-13 01:16:12] apptainer version 1.3.2-1.el7
[2025-10-13 01:16:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 01:16:14] c-115-14.aglt2.org
[2025-10-13 01:16:14] apptainer works
[2025-10-13 01:16:14] Set ATHENA_PROC_NUMBER=8
[2025-10-13 01:16:14] Set ATHENA_CORE_NUMBER=8
[2025-10-13 01:16:14] Starting ATLAS job with PandaID=6841898364
[2025-10-13 01:16:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 03:08:47]  *** The last 200 lines of the pilot log: ***
[2025-10-13 03:08:47] 2025-10-13 07:07:49,105 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 03:08:47] 2025-10-13 07:07:49,105 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 03:08:47] 2025-10-13 07:07:49,105 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 03:08:47] 2025-10-13 07:07:49,108 | INFO     | fitting pss+swap vs Time
[2025-10-13 03:08:47] 2025-10-13 07:07:49,108 | INFO     | sum of square deviations: 401533110.0
[2025-10-13 03:08:47] 2025-10-13 07:07:49,108 | INFO     | sum of deviations: 3356018822.000019
[2025-10-13 03:08:47] 2025-10-13 07:07:49,108 | INFO     | mean x: 1760335915.0
[2025-10-13 03:08:47] 2025-10-13 07:07:49,109 | INFO     | mean y: 2674972.0642201835
[2025-10-13 03:08:47] 2025-10-13 07:07:49,109 | INFO     | -- intersect: -14710234914.203007
[2025-10-13 03:08:47] 2025-10-13 07:07:49,109 | INFO     | intersect: -14710234914.203007
[2025-10-13 03:08:47] 2025-10-13 07:07:49,109 | INFO     | chi2: 1.774870982184186
[2025-10-13 03:08:47] 2025-10-13 07:07:49,109 | INFO     | sum of square deviations: 348769330.0
[2025-10-13 03:08:47] 2025-10-13 07:07:49,110 | INFO     | sum of deviations: 5729998521.999993
[2025-10-13 03:08:47] 2025-10-13 07:07:49,110 | INFO     | mean x: 1760335762.5
[2025-10-13 03:08:47] 2025-10-13 07:07:49,110 | INFO     | mean y: 2681838.3846153845
[2025-10-13 03:08:47] 2025-10-13 07:07:49,110 | INFO     | -- intersect: -28918213577.931755
[2025-10-13 03:08:47] 2025-10-13 07:07:49,110 | INFO     | intersect: -28918213577.931755
[2025-10-13 03:08:47] 2025-10-13 07:07:49,110 | INFO     | chi2: 1.7658406803314406
[2025-10-13 03:08:47] 2025-10-13 07:07:49,111 | INFO     | current chi2=1.7658406803314406 (change=0.5087863818491469 %)
[2025-10-13 03:08:47] 2025-10-13 07:07:49,111 | INFO     | right removable region: 103
[2025-10-13 03:08:47] 2025-10-13 07:07:49,111 | INFO     | sum of square deviations: 348769330.0
[2025-10-13 03:08:47] 2025-10-13 07:07:49,111 | INFO     | sum of deviations: -15883932099.5
[2025-10-13 03:08:47] 2025-10-13 07:07:49,112 | INFO     | mean x: 1760336067.5
[2025-10-13 03:08:47] 2025-10-13 07:07:49,112 | INFO     | mean y: 2729566.125
[2025-10-13 03:08:47] 2025-10-13 07:07:49,112 | INFO     | -- intersect: 80173364319.10298
[2025-10-13 03:08:47] 2025-10-13 07:07:49,112 | INFO     | intersect: 80173364319.10298
[2025-10-13 03:08:47] 2025-10-13 07:07:49,112 | INFO     | chi2: 0.14023646697123013
[2025-10-13 03:08:47] 2025-10-13 07:07:49,112 | INFO     | current chi2=0.14023646697123013 (change=92.09877966461242 %)
[2025-10-13 03:08:47] 2025-10-13 07:07:49,112 | INFO     | sum of square deviations: 300842850.0
[2025-10-13 03:08:47] 2025-10-13 07:07:49,113 | INFO     | sum of deviations: -16699140766.000004
[2025-10-13 03:08:47] 2025-10-13 07:07:49,113 | INFO     | mean x: 1760336220.0
[2025-10-13 03:08:47] 2025-10-13 07:07:49,113 | INFO     | mean y: 2732023.494949495
[2025-10-13 03:08:47] 2025-10-13 07:07:49,113 | INFO     | -- intersect: 97715216575.70668
[2025-10-13 03:08:47] 2025-10-13 07:07:49,113 | INFO     | intersect: 97715216575.70668
[2025-10-13 03:08:47] 2025-10-13 07:07:49,114 | INFO     | chi2: 0.10299917774720418
[2025-10-13 03:08:47] 2025-10-13 07:07:49,114 | INFO     | current chi2=0.10299917774720418 (change=26.55321403074513 %)
[2025-10-13 03:08:47] 2025-10-13 07:07:49,114 | INFO     | sum of square deviations: 257521107.5
[2025-10-13 03:08:47] 2025-10-13 07:07:49,114 | INFO     | sum of deviations: -15898354512.499998
[2025-10-13 03:08:47] 2025-10-13 07:07:49,114 | INFO     | mean x: 1760336372.5
[2025-10-13 03:08:47] 2025-10-13 07:07:49,115 | INFO     | mean y: 2729199.3085106383
[2025-10-13 03:08:47] 2025-10-13 07:07:49,115 | INFO     | -- intersect: 108679070268.76144
[2025-10-13 03:08:47] 2025-10-13 07:07:49,115 | INFO     | intersect: 108679070268.76144
[2025-10-13 03:08:47] 2025-10-13 07:07:49,115 | INFO     | chi2: 0.09351776294873096
[2025-10-13 03:08:47] 2025-10-13 07:07:49,115 | INFO     | current chi2=0.09351776294873096 (change=9.205330572389535 %)
[2025-10-13 03:08:47] 2025-10-13 07:07:49,115 | INFO     | left removable region: 30
[2025-10-13 03:08:47] 2025-10-13 07:07:49,115 | INFO     | sum of square deviations: 120605052.0
[2025-10-13 03:08:47] 2025-10-13 07:07:49,116 | INFO     | sum of deviations: -10171047585.0
[2025-10-13 03:08:47] 2025-10-13 07:07:49,116 | INFO     | mean x: 1760336647.0
[2025-10-13 03:08:47] 2025-10-13 07:07:49,116 | INFO     | mean y: 2730579.01369863
[2025-10-13 03:08:47] 2025-10-13 07:07:49,116 | INFO     | -- intersect: 148458102102.3919
[2025-10-13 03:08:47] 2025-10-13 07:07:49,116 | INFO     | intersect: 148458102102.3919
[2025-10-13 03:08:47] 2025-10-13 07:07:49,116 | INFO     | chi2: 0.06795715029450412
[2025-10-13 03:08:47] 2025-10-13 07:07:49,116 | INFO     | -- intersect: 148458102102.3919
[2025-10-13 03:08:47] 2025-10-13 07:07:49,117 | INFO     | current memory leak: -84.33 B/s (using 73 data points, chi2=0.07)
[2025-10-13 03:08:47] 2025-10-13 07:07:49,117 | INFO     | could have reported an average CPU frequency of 2080 MHz (7 samples)
[2025-10-13 03:08:47] 2025-10-13 07:07:49,117 | INFO     | ..............................
[2025-10-13 03:08:47] 2025-10-13 07:07:49,117 | INFO     | . Timing measurements:
[2025-10-13 03:08:47] 2025-10-13 07:07:49,117 | INFO     | . get job = 0 s
[2025-10-13 03:08:47] 2025-10-13 07:07:49,117 | INFO     | . initial setup = 2 s
[2025-10-13 03:08:47] 2025-10-13 07:07:49,118 | INFO     | . payload setup = 7 s
[2025-10-13 03:08:47] 2025-10-13 07:07:49,118 | INFO     | . stage-in = 0 s
[2025-10-13 03:08:47] 2025-10-13 07:07:49,118 | INFO     | . payload execution = 6644 s
[2025-10-13 03:08:47] 2025-10-13 07:07:49,118 | INFO     | . stage-out = 0 s
[2025-10-13 03:08:47] 2025-10-13 07:07:49,118 | INFO     | . log creation = 0 s
[2025-10-13 03:08:47] 2025-10-13 07:07:49,118 | INFO     | ..............................
[2025-10-13 03:08:47] 2025-10-13 07:07:49,451 | INFO     | 
[2025-10-13 03:08:47] 2025-10-13 07:07:49,451 | INFO     | job summary report
[2025-10-13 03:08:47] 2025-10-13 07:07:49,451 | INFO     | --------------------------------------------------
[2025-10-13 03:08:47] 2025-10-13 07:07:49,451 | INFO     | PanDA job id: 6841898364
[2025-10-13 03:08:47] 2025-10-13 07:07:49,452 | INFO     | task id: 46676269
[2025-10-13 03:08:47] 2025-10-13 07:07:49,452 | INFO     | errors: (none)
[2025-10-13 03:08:47] 2025-10-13 07:07:49,452 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 03:08:47] 2025-10-13 07:07:49,452 | INFO     | pilot state: finished 
[2025-10-13 03:08:47] 2025-10-13 07:07:49,452 | INFO     | transexitcode: 0
[2025-10-13 03:08:47] 2025-10-13 07:07:49,453 | INFO     | exeerrorcode: 0
[2025-10-13 03:08:47] 2025-10-13 07:07:49,453 | INFO     | exeerrordiag: 
[2025-10-13 03:08:47] 2025-10-13 07:07:49,453 | INFO     | exitcode: 0
[2025-10-13 03:08:47] 2025-10-13 07:07:49,453 | INFO     | exitmsg: OK
[2025-10-13 03:08:47] 2025-10-13 07:07:49,453 | INFO     | cpuconsumptiontime: 48847 s
[2025-10-13 03:08:47] 2025-10-13 07:07:49,453 | INFO     | nevents: 400
[2025-10-13 03:08:47] 2025-10-13 07:07:49,454 | INFO     | neventsw: 0
[2025-10-13 03:08:47] 2025-10-13 07:07:49,454 | INFO     | pid: 30352
[2025-10-13 03:08:47] 2025-10-13 07:07:49,454 | INFO     | pgrp: 30352
[2025-10-13 03:08:47] 2025-10-13 07:07:49,454 | INFO     | corecount: 8
[2025-10-13 03:08:47] 2025-10-13 07:07:49,454 | INFO     | event service: False
[2025-10-13 03:08:47] 2025-10-13 07:07:49,454 | INFO     | sizes: {0: 2348636, 1: 2348835, 6: 2349097, 12: 2349125, 6653: 2376207, 6654: 2385205, 6656: 2385389, 6661: 2385583}
[2025-10-13 03:08:47] 2025-10-13 07:07:49,455 | INFO     | --------------------------------------------------
[2025-10-13 03:08:47] 2025-10-13 07:07:49,455 | INFO     | 
[2025-10-13 03:08:47] 2025-10-13 07:07:49,455 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 03:08:47] 2025-10-13 07:07:49,482 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 03:08:47] 2025-10-13 07:07:49,483 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 03:08:47] 2025-10-13 07:07:49,483 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 03:08:47] 2025-10-13 07:07:49,483 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 03:08:47] 2025-10-13 07:07:49,483 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 03:08:47] 2025-10-13 07:07:49,484 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 03:08:47] 2025-10-13 07:07:49,484 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 03:08:47] 2025-10-13 07:07:49,484 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 03:08:47] 2025-10-13 07:07:49,484 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 03:08:47] 2025-10-13 07:07:49,484 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 03:08:47] 2025-10-13 07:07:49,484 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 03:08:47] 2025-10-13 07:07:49,485 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 03:08:47] 2025-10-13 07:07:49,485 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 03:08:47] 2025-10-13 07:07:49,485 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 03:08:47] 2025-10-13 07:07:49,485 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 03:08:47] 2025-10-13 07:07:49,485 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 03:08:47] 2025-10-13 07:07:49,486 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 03:08:47] 2025-10-13 07:07:49,486 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 03:08:47] 2025-10-13 07:07:49,486 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 03:08:47] 2025-10-13 07:07:49,486 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 03:08:47] 2025-10-13 07:07:49,486 | INFO     | job 6841898364 has completed (purged errors)
[2025-10-13 03:08:47] 2025-10-13 07:07:49,487 | INFO     | overall cleanup function is called
[2025-10-13 03:08:47] 2025-10-13 07:07:50,492 | INFO     | --- collectZombieJob: --- 10, [30352]
[2025-10-13 03:08:47] 2025-10-13 07:07:50,492 | INFO     | zombie collector waiting for pid 30352
[2025-10-13 03:08:47] 2025-10-13 07:07:50,492 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 03:08:47] 2025-10-13 07:07:50,493 | INFO     | collected zombie processes
[2025-10-13 03:08:47] 2025-10-13 07:07:50,493 | INFO     | will attempt to kill all subprocesses of pid=30352
[2025-10-13 03:08:47] 2025-10-13 07:07:50,575 | INFO     | process IDs to be killed: [30352] (in reverse order)
[2025-10-13 03:08:47] 2025-10-13 07:07:50,628 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 03:08:47] 2025-10-13 07:07:50,629 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 03:08:47] 2025-10-13 07:07:50,632 | INFO     | did not find any defunct processes belonging to 30352
[2025-10-13 03:08:47] 2025-10-13 07:07:50,635 | INFO     | did not find any defunct processes belonging to 30352
[2025-10-13 03:08:47] 2025-10-13 07:07:50,635 | INFO     | ready for new job
[2025-10-13 03:08:47] 2025-10-13 07:07:50,635 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 03:08:47] 2025-10-13 07:07:50,637 | INFO     | ***************************************
[2025-10-13 03:08:47] 2025-10-13 07:07:50,637 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 03:08:47] 2025-10-13 07:07:50,637 | INFO     | ***************************************
[2025-10-13 03:08:47] 2025-10-13 07:07:50,637 | INFO     | 
[2025-10-13 03:08:47] 2025-10-13 07:07:50,637 | INFO     | architecture information:
[2025-10-13 03:08:47] 2025-10-13 07:07:50,638 | INFO     | executing command: cat /etc/os-release
[2025-10-13 03:08:47] 2025-10-13 07:07:50,657 | INFO     | cat /etc/os-release:
[2025-10-13 03:08:47] NAME="CentOS Linux"
[2025-10-13 03:08:47] VERSION="7 (Core)"
[2025-10-13 03:08:47] ID="centos"
[2025-10-13 03:08:47] ID_LIKE="rhel fedora"
[2025-10-13 03:08:47] VERSION_ID="7"
[2025-10-13 03:08:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 03:08:47] ANSI_COLOR="0;31"
[2025-10-13 03:08:47] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 03:08:47] HOME_URL="https://www.centos.org/"
[2025-10-13 03:08:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 03:08:47] 
[2025-10-13 03:08:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 03:08:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 03:08:47] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 03:08:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 03:08:47] 
[2025-10-13 03:08:47] 2025-10-13 07:07:50,657 | INFO     | ***************************************
[2025-10-13 03:08:47] 2025-10-13 07:07:51,161 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 03:08:47] 2025-10-13 07:07:51,179 | INFO     | sufficient remaining disk space (18586009600 B)
[2025-10-13 03:08:47] 2025-10-13 07:07:51,179 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 03:08:47] 2025-10-13 07:07:51,180 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 03:08:47] 2025-10-13 07:07:51,180 | INFO     | update_server=False
[2025-10-13 03:08:47] 2025-10-13 07:07:51,180 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 03:08:47] 2025-10-13 07:07:51,181 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 03:08:47] 2025-10-13 07:07:51,729 | INFO     | all data control threads have been joined
[2025-10-13 03:08:47] 2025-10-13 07:07:51,747 | INFO     | all payload control threads have been joined
[2025-10-13 03:08:47] 2025-10-13 07:07:51,947 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 03:08:47] 2025-10-13 07:07:51,947 | INFO     | aborting loop
[2025-10-13 03:08:47] 2025-10-13 07:07:52,185 | INFO     | [job] retrieve thread has finished
[2025-10-13 03:08:47] 2025-10-13 07:07:52,186 | INFO     | [job] queue monitor thread has finished
[2025-10-13 03:08:47] 2025-10-13 07:07:52,190 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 03:08:47] 2025-10-13 07:07:52,476 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 03:08:47] 2025-10-13 07:07:52,552 | INFO     | all job control threads have been joined
[2025-10-13 03:08:47] 2025-10-13 07:07:52,707 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 03:08:47] 2025-10-13 07:07:52,734 | INFO     | [data] control thread has finished
[2025-10-13 03:08:47] 2025-10-13 07:07:52,753 | INFO     | [payload] control thread has finished
[2025-10-13 03:08:47] 2025-10-13 07:07:52,912 | INFO     | [payload] validate_post thread has finished
[2025-10-13 03:08:47] 2025-10-13 07:07:52,953 | INFO     | [job] job monitor thread has finished
[2025-10-13 03:08:47] 2025-10-13 07:07:53,514 | INFO     | [payload] failed_post thread has finished
[2025-10-13 03:08:47] 2025-10-13 07:07:53,557 | INFO     | [job] control thread has finished
[2025-10-13 03:08:47] 2025-10-13 07:07:53,598 | INFO     | [job] validate thread has finished
[2025-10-13 03:08:47] 2025-10-13 07:07:53,599 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 03:08:47] 2025-10-13 07:07:53,627 | INFO     | [data] copytool_in thread has finished
[2025-10-13 03:08:47] 2025-10-13 07:07:54,196 | INFO     | [data] copytool_out thread has finished
[2025-10-13 03:08:47] 2025-10-13 07:07:54,275 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 03:08:47] 2025-10-13 07:07:58,281 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 03:08:47] 2025-10-13 07:08:02,170 | INFO     | job.realtimelogging is not enabled
[2025-10-13 03:08:47] 2025-10-13 07:08:03,176 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 03:08:47] 2025-10-13 07:08:21,997 | INFO     | PID=23929 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-13 03:08:47] 2025-10-13 07:08:21,998 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 03:08:47] 2025-10-13 07:08:21,998 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 03:08:47] 2025-10-13 07:08:21,998 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 03:08:47] 2025-10-13 07:08:41,386 | INFO     | [monitor] cgroup control has ended
[2025-10-13 03:08:47] 2025-10-13 07:08:41,932 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139999122306880)>', '<ExcThread(monitor, started 139997873170176)>']
[2025-10-13 03:08:47] 2025-10-13 07:08:42,099 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 03:08:47] 2025-10-13 07:08:42,099 | INFO     | [monitor] control thread has ended
[2025-10-13 03:08:47] 2025-10-13 07:08:46,939 | INFO     | all workflow threads have been joined
[2025-10-13 03:08:47] 2025-10-13 07:08:46,939 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 03:08:47] 2025-10-13 07:08:46,940 | INFO     | traces error code: 0
[2025-10-13 03:08:47] 2025-10-13 07:08:46,940 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 03:08:47] 2025-10-13 07:08:47,045 [wrapper] ==== pilot stdout END ====
[2025-10-13 03:08:47] 2025-10-13 07:08:47,049 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 03:08:47] 2025-10-13 07:08:47,053 [wrapper] pilotpid: 23929
[2025-10-13 03:08:47] 2025-10-13 07:08:47,058 [wrapper] Pilot exit status: 0
[2025-10-13 03:08:47] 2025-10-13 07:08:47,078 [wrapper] pandaids: 6841898364
[2025-10-13 03:08:47] 2025-10-13 07:08:47,124 [wrapper] cleanup supervisor_pilot  4488 23930
[2025-10-13 03:08:47] 2025-10-13 07:08:47,129 [wrapper] Test setup, not cleaning
[2025-10-13 03:08:47] 2025-10-13 07:08:47,134 [wrapper] apfmon messages muted
[2025-10-13 03:08:47] 2025-10-13 07:08:47,139 [wrapper] ==== wrapper stdout END ====
[2025-10-13 03:08:47] 2025-10-13 07:08:47,143 [wrapper] ==== wrapper stderr END ====
[2025-10-13 03:08:47]  *** Error codes and diagnostics ***
[2025-10-13 03:08:47]     "exeErrorCode": 0,
[2025-10-13 03:08:47]     "exeErrorDiag": "",
[2025-10-13 03:08:47]     "pilotErrorCode": 0,
[2025-10-13 03:08:47]     "pilotErrorDiag": "",
[2025-10-13 03:08:47]  *** Listing of results directory ***
[2025-10-13 03:08:47] total 413028
[2025-10-13 03:08:47] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 23:15 pilot3.tar.gz
[2025-10-13 03:08:47] -rwx------ 1 boincer umatlas     36292 Oct 12 23:17 runpilot2-wrapper.sh
[2025-10-13 03:08:47] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 23:17 queuedata.json
[2025-10-13 03:08:47] -rw-r--r-- 1 boincer umatlas       100 Oct 13 01:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 03:08:47] -rwxr-xr-x 1 boincer umatlas      7986 Oct 13 01:16 run_atlas
[2025-10-13 03:08:47] -rw-r--r-- 1 boincer umatlas       105 Oct 13 01:16 job.xml
[2025-10-13 03:08:47] -rw-r--r-- 2 boincer umatlas 222618073 Oct 13 01:16 EVNT.46676267._003170.pool.root.1
[2025-10-13 03:08:47] -rw-r--r-- 2 boincer umatlas    569679 Oct 13 01:16 input.tar.gz
[2025-10-13 03:08:47] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 01:16 start_atlas.sh
[2025-10-13 03:08:47] drwxrwx--x 2 boincer umatlas      4096 Oct 13 01:16 shared
[2025-10-13 03:08:47] -rw-r--r-- 1 boincer umatlas         0 Oct 13 01:16 boinc_lockfile
[2025-10-13 03:08:47] -rw-r--r-- 1 boincer umatlas      2550 Oct 13 01:16 pandaJob.out
[2025-10-13 03:08:47] -rw------- 1 boincer umatlas    973230 Oct 13 01:16 agis_schedconf.cvmfs.json
[2025-10-13 03:08:47] -rw------- 1 boincer umatlas   1560580 Oct 13 01:16 agis_ddmendpoints.agis.ALL.json
[2025-10-13 03:08:47] drwx------ 5 boincer umatlas      4096 Oct 13 01:16 pilot3
[2025-10-13 03:08:47] -rw-r--r-- 1 boincer umatlas      5910 Oct 13 03:00 init_data.xml
[2025-10-13 03:08:47] -rw------- 1 boincer umatlas 193818976 Oct 13 03:07 HITS.46676269._095603.pool.root.1
[2025-10-13 03:08:47] -rw------- 1 boincer umatlas      1050 Oct 13 03:07 memory_monitor_summary.json
[2025-10-13 03:08:47] -rw------- 1 boincer umatlas    351052 Oct 13 03:07 log.46676269._095603.job.log.tgz.1
[2025-10-13 03:08:47] -rw-r--r-- 1 boincer umatlas       529 Oct 13 03:07 boinc_task_state.xml
[2025-10-13 03:08:47] -rw------- 1 boincer umatlas      7849 Oct 13 03:07 heartbeat.json
[2025-10-13 03:08:47] -rw------- 1 boincer umatlas        95 Oct 13 03:08 pilot_heartbeat.json
[2025-10-13 03:08:47] -rw-r--r-- 1 boincer umatlas      8192 Oct 13 03:08 boinc_mmap_file
[2025-10-13 03:08:47] -rw-r--r-- 1 boincer umatlas        27 Oct 13 03:08 wrapper_checkpoint.txt
[2025-10-13 03:08:47] -rw------- 1 boincer umatlas      4818 Oct 13 03:08 pilotlog.txt
[2025-10-13 03:08:47] -rw------- 1 boincer umatlas    947589 Oct 13 03:08 log.46676269._095603.job.log.1
[2025-10-13 03:08:47] -rw------- 1 boincer umatlas       357 Oct 13 03:08 output.list
[2025-10-13 03:08:47] -rw-r--r-- 1 boincer umatlas       620 Oct 13 03:08 runtime_log
[2025-10-13 03:08:47] -rw------- 1 boincer umatlas   1320960 Oct 13 03:08 result.tar.gz
[2025-10-13 03:08:47] -rw------- 1 boincer umatlas       658 Oct 13 03:08 UACNDmXFOS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm7bmNDmv2A1Io.diag
[2025-10-13 03:08:47] -rw-r--r-- 1 boincer umatlas      8703 Oct 13 03:08 runtime_log.err
[2025-10-13 03:08:47] -rw-r--r-- 1 boincer umatlas     20852 Oct 13 03:08 stderr.txt
[2025-10-13 03:08:47] HITS file was successfully produced:
[2025-10-13 03:08:47] -rw------- 1 boincer umatlas 193818976 Oct 13 03:07 shared/HITS.pool.root.1
[2025-10-13 03:08:47]  *** Contents of shared directory: ***
[2025-10-13 03:08:47] total 408556
[2025-10-13 03:08:47] -rw-r--r-- 2 boincer umatlas 222618073 Oct 13 01:16 ATLAS.root_0
[2025-10-13 03:08:47] -rw-r--r-- 2 boincer umatlas    569679 Oct 13 01:16 input.tar.gz
[2025-10-13 03:08:47] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 01:16 start_atlas.sh
[2025-10-13 03:08:47] -rw------- 1 boincer umatlas 193818976 Oct 13 03:07 HITS.pool.root.1
[2025-10-13 03:08:47] -rw------- 1 boincer umatlas   1320960 Oct 13 03:08 result.tar.gz
03:08:48 (20260): run_atlas exited; CPU time 48874.044624
03:08:48 (20260): called boinc_finish(0)

</stderr_txt>
]]>

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