Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
17:19:54 (4076446): wrapper (7.7.26015): starting
17:19:54 (4076446): wrapper: running run_atlas (--nthreads 3)
[2025-10-13 17:19:54] Arguments: --nthreads 3
[2025-10-13 17:19:54] Threads: 3
[2025-10-13 17:19:54] Checking for CVMFS
[2025-10-13 17:19:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 17:19:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 17:19:55] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 17:19:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 17:19:55] 2.9.2.0 2254445 6032 86824 151666 0 56 30396926 36864000 0 130560 0 4792701 99.991 209226 800 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 17:19:55] CVMFS is ok
[2025-10-13 17:19:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 17:19:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 17:19:55] Further information can be found at the LHC@home message board.
[2025-10-13 17:19:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 17:19:55] Checking for apptainer binary...
[2025-10-13 17:19:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 17:19:55] Running /usr/bin/apptainer --version
[2025-10-13 17:19:55] apptainer version 1.4.1-1.1
[2025-10-13 17:19:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 17:19:55] atlasA230
[2025-10-13 17:19:55] apptainer works
[2025-10-13 17:19:55] Set ATHENA_PROC_NUMBER=3
[2025-10-13 17:19:55] Set ATHENA_CORE_NUMBER=3
[2025-10-13 17:19:55] Starting ATLAS job with PandaID=6841068888
[2025-10-13 17:19:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 18:46:13]  *** The last 200 lines of the pilot log: ***
[2025-10-13 18:46:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 18:46:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 18:46:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 18:46:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 18:46:13] 
[2025-10-13 18:46:13] 2025-10-13 16:45:11,590 | INFO     | ***************************************
[2025-10-13 18:46:13] 2025-10-13 16:45:12,092 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-13 18:46:13] 2025-10-13 16:45:12,105 | INFO     | sufficient remaining disk space (330046636032 B)
[2025-10-13 18:46:13] 2025-10-13 16:45:12,105 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 18:46:13] 2025-10-13 16:45:12,105 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 18:46:13] 2025-10-13 16:45:12,105 | INFO     | update_server=False
[2025-10-13 18:46:13] 2025-10-13 16:45:12,105 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 18:46:13] 2025-10-13 16:45:12,105 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 18:46:13] 2025-10-13 16:45:12,160 | INFO     | all payload control threads have been joined
[2025-10-13 18:46:13] 2025-10-13 16:45:12,161 | INFO     | all job control threads have been joined
[2025-10-13 18:46:13] 2025-10-13 16:45:12,359 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 18:46:13] 2025-10-13 16:45:12,360 | INFO     | aborting loop
[2025-10-13 18:46:13] 2025-10-13 16:45:12,563 | INFO     | all data control threads have been joined
[2025-10-13 18:46:13] 2025-10-13 16:45:13,111 | INFO     | [job] retrieve thread has finished
[2025-10-13 18:46:13] 2025-10-13 16:45:13,111 | INFO     | [job] queue monitor thread has finished
[2025-10-13 18:46:13] 2025-10-13 16:45:13,166 | INFO     | [payload] control thread has finished
[2025-10-13 18:46:13] 2025-10-13 16:45:13,167 | INFO     | [job] control thread has finished
[2025-10-13 18:46:13] 2025-10-13 16:45:13,304 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 18:46:13] 2025-10-13 16:45:13,327 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 18:46:13] 2025-10-13 16:45:13,346 | INFO     | [data] copytool_in thread has finished
[2025-10-13 18:46:13] 2025-10-13 16:45:13,364 | INFO     | [job] job monitor thread has finished
[2025-10-13 18:46:13] 2025-10-13 16:45:13,569 | INFO     | [data] control thread has finished
[2025-10-13 18:46:13] 2025-10-13 16:45:13,788 | INFO     | [payload] failed_post thread has finished
[2025-10-13 18:46:13] 2025-10-13 16:45:13,858 | INFO     | [job] validate thread has finished
[2025-10-13 18:46:13] 2025-10-13 16:45:13,944 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 18:46:13] 2025-10-13 16:45:14,018 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 18:46:13] 2025-10-13 16:45:14,320 | INFO     | [payload] validate_post thread has finished
[2025-10-13 18:46:13] 2025-10-13 16:45:15,310 | INFO     | [data] copytool_out thread has finished
[2025-10-13 18:46:13] 2025-10-13 16:45:15,330 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 18:46:13] 2025-10-13 16:45:19,337 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 18:46:13] 2025-10-13 16:45:22,410 | INFO     | job.realtimelogging is not enabled
[2025-10-13 18:46:13] 2025-10-13 16:45:23,416 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 18:46:13] 2025-10-13 16:45:41,757 | INFO     | PID=4080171 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 18:46:13] 2025-10-13 16:45:41,758 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 18:46:13] 2025-10-13 16:45:41,758 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 18:46:13] 2025-10-13 16:45:41,758 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 18:46:13] 2025-10-13 16:46:06,868 | INFO     | [monitor] cgroup control has ended
[2025-10-13 18:46:13] 2025-10-13 16:46:07,948 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139638879991616)>', '<ExcThread(monitor, started 139638152873728)>']
[2025-10-13 18:46:13] 2025-10-13 16:46:08,898 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 18:46:13] 2025-10-13 16:46:08,898 | INFO     | [monitor] control thread has ended
[2025-10-13 18:46:13] 2025-10-13 16:46:12,974 | INFO     | all workflow threads have been joined
[2025-10-13 18:46:13] 2025-10-13 16:46:12,974 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 18:46:13] 2025-10-13 16:46:12,974 | INFO     | traces error code: 0
[2025-10-13 18:46:13] 2025-10-13 16:46:12,975 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 18:46:13] 2025-10-13 16:46:13,025 [wrapper] ==== pilot stdout END ====
[2025-10-13 18:46:13] 2025-10-13 16:46:13,028 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 18:46:13] 2025-10-13 16:46:13,030 [wrapper] pilotpid: 4080171
[2025-10-13 18:46:13] 2025-10-13 16:46:13,032 [wrapper] Pilot exit status: 0
[2025-10-13 18:46:13] 2025-10-13 16:46:13,040 [wrapper] pandaids: 6841068888
[2025-10-13 18:46:13] 2025-10-13 16:46:13,056 [wrapper] cleanup supervisor_pilot 4098935 4080172
[2025-10-13 18:46:13] 2025-10-13 16:46:13,059 [wrapper] Test setup, not cleaning
[2025-10-13 18:46:13] 2025-10-13 16:46:13,061 [wrapper] apfmon messages muted
[2025-10-13 18:46:13] 2025-10-13 16:46:13,063 [wrapper] ==== wrapper stdout END ====
[2025-10-13 18:46:13] 2025-10-13 16:46:13,065 [wrapper] ==== wrapper stderr END ====
[2025-10-13 18:46:13]  *** Error codes and diagnostics ***
[2025-10-13 18:46:13]     "exeErrorCode": 0,
[2025-10-13 18:46:13]     "exeErrorDiag": "",
[2025-10-13 18:46:13]     "pilotErrorCode": 0,
[2025-10-13 18:46:13]     "pilotErrorDiag": "",
[2025-10-13 18:46:13]  *** Listing of results directory ***
[2025-10-13 18:46:13] total 419348
[2025-10-13 18:46:13] -rw-r--r-- 1 boinc boinc    557409 Oct 13 02:11 pilot3.tar.gz
[2025-10-13 18:46:13] -rw-r--r-- 1 boinc boinc      5112 Oct 13 02:21 queuedata.json
[2025-10-13 18:46:13] -rwx------ 1 boinc boinc     36292 Oct 13 02:22 runpilot2-wrapper.sh
[2025-10-13 18:46:13] -rw-r--r-- 1 boinc boinc       100 Oct 13 17:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 18:46:13] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 17:19 run_atlas
[2025-10-13 18:46:13] -rw-r--r-- 1 boinc boinc       105 Oct 13 17:19 job.xml
[2025-10-13 18:46:13] -rw-r--r-- 2 boinc boinc 222076128 Oct 13 17:19 EVNT.46676267._004690.pool.root.1
[2025-10-13 18:46:13] -rw-r--r-- 2 boinc boinc    569677 Oct 13 17:19 input.tar.gz
[2025-10-13 18:46:13] -rw-r--r-- 2 boinc boinc     15120 Oct 13 17:19 start_atlas.sh
[2025-10-13 18:46:13] drwxrwx--x 2 boinc boinc      4096 Oct 13 17:19 shared
[2025-10-13 18:46:13] -rw-r--r-- 1 boinc boinc         0 Oct 13 17:19 boinc_setup_complete
[2025-10-13 18:46:13] -rw-r--r-- 1 boinc boinc      6442 Oct 13 17:19 init_data.xml
[2025-10-13 18:46:13] -rw-r--r-- 1 boinc boinc         0 Oct 13 17:19 boinc_lockfile
[2025-10-13 18:46:13] -rw-r--r-- 1 boinc boinc      2550 Oct 13 17:19 pandaJob.out
[2025-10-13 18:46:13] -rw------- 1 boinc boinc    972783 Oct 13 17:19 agis_schedconf.cvmfs.json
[2025-10-13 18:46:13] -rw------- 1 boinc boinc   1560580 Oct 13 17:20 agis_ddmendpoints.agis.ALL.json
[2025-10-13 18:46:13] drwx------ 5 boinc boinc      4096 Oct 13 17:20 pilot3
[2025-10-13 18:46:13] -rw------- 1 boinc boinc 201420099 Oct 13 18:44 HITS.46676269._093097.pool.root.1
[2025-10-13 18:46:13] -rw-r--r-- 1 boinc boinc       529 Oct 13 18:44 boinc_task_state.xml
[2025-10-13 18:46:13] -rw------- 1 boinc boinc      1035 Oct 13 18:44 memory_monitor_summary.json
[2025-10-13 18:46:13] -rw------- 1 boinc boinc    263934 Oct 13 18:45 log.46676269._093097.job.log.tgz.1
[2025-10-13 18:46:13] -rw------- 1 boinc boinc      7771 Oct 13 18:45 heartbeat.json
[2025-10-13 18:46:13] -rw------- 1 boinc boinc        95 Oct 13 18:45 pilot_heartbeat.json
[2025-10-13 18:46:13] -rw-r--r-- 1 boinc boinc        27 Oct 13 18:45 wrapper_checkpoint.txt
[2025-10-13 18:46:13] -rw-r--r-- 1 boinc boinc      8192 Oct 13 18:45 boinc_mmap_file
[2025-10-13 18:46:13] -rw------- 1 boinc boinc      4824 Oct 13 18:46 pilotlog.txt
[2025-10-13 18:46:13] -rw------- 1 boinc boinc    747922 Oct 13 18:46 log.46676269._093097.job.log.1
[2025-10-13 18:46:13] -rw------- 1 boinc boinc       357 Oct 13 18:46 output.list
[2025-10-13 18:46:13] -rw-r--r-- 1 boinc boinc       620 Oct 13 18:46 runtime_log
[2025-10-13 18:46:13] -rw------- 1 boinc boinc   1034240 Oct 13 18:46 result.tar.gz
[2025-10-13 18:46:13] -rw-r--r-- 1 boinc boinc      8792 Oct 13 18:46 runtime_log.err
[2025-10-13 18:46:13] -rw------- 1 boinc boinc       661 Oct 13 18:46 ofWLDmfVLS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmMNVMDmsLF4gn.diag
[2025-10-13 18:46:13] -rw-r--r-- 1 boinc boinc      8307 Oct 13 18:46 stderr.txt
[2025-10-13 18:46:13] HITS file was successfully produced:
[2025-10-13 18:46:13] -rw------- 1 boinc boinc 201420099 Oct 13 18:44 shared/HITS.pool.root.1
[2025-10-13 18:46:13]  *** Contents of shared directory: ***
[2025-10-13 18:46:13] total 415168
[2025-10-13 18:46:13] -rw-r--r-- 2 boinc boinc 222076128 Oct 13 17:19 ATLAS.root_0
[2025-10-13 18:46:13] -rw-r--r-- 2 boinc boinc    569677 Oct 13 17:19 input.tar.gz
[2025-10-13 18:46:13] -rw-r--r-- 2 boinc boinc     15120 Oct 13 17:19 start_atlas.sh
[2025-10-13 18:46:13] -rw------- 1 boinc boinc 201420099 Oct 13 18:44 HITS.pool.root.1
[2025-10-13 18:46:13] -rw------- 1 boinc boinc   1034240 Oct 13 18:46 result.tar.gz
18:46:14 (4076446): run_atlas exited; CPU time 14706.335514
18:46:14 (4076446): called boinc_finish(0)

</stderr_txt>
]]>

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