Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
01:04:54 (1329): wrapper (7.7.26015): starting
01:04:54 (1329): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 01:04:54] Arguments: --nthreads 8
[2025-10-13 01:04:54] Threads: 8
[2025-10-13 01:04:54] Checking for CVMFS
[2025-10-13 01:04:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 01:04:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 01:04:54] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 01:04:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 01:04:54] 2.11.2.0 8318 53946 111932 151649 3 59 10133535 18432000 1009 130560 0 49363074 99.974 2550697 38889 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 01:04:54] CVMFS is ok
[2025-10-13 01:04:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 01:04:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 01:04:54] Further information can be found at the LHC@home message board.
[2025-10-13 01:04:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 01:04:54] Checking for apptainer binary...
[2025-10-13 01:04:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 01:04:54] Running /usr/bin/apptainer --version
[2025-10-13 01:04:54] apptainer version 1.3.2-1.el7
[2025-10-13 01:04:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 01:04:55] c-206-28.aglt2.org
[2025-10-13 01:04:55] apptainer works
[2025-10-13 01:04:55] Set ATHENA_PROC_NUMBER=8
[2025-10-13 01:04:55] Set ATHENA_CORE_NUMBER=8
[2025-10-13 01:04:55] Starting ATLAS job with PandaID=6841068966
[2025-10-13 01:04:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 04:10:42]  *** The last 200 lines of the pilot log: ***
[2025-10-13 04:10:42] 2025-10-13 08:10:09,442 | INFO     | right removable region: 176
[2025-10-13 04:10:42] 2025-10-13 08:10:09,442 | INFO     | sum of square deviations: 1719429448.0
[2025-10-13 04:10:42] 2025-10-13 08:10:09,443 | INFO     | sum of deviations: 7883109788.0
[2025-10-13 04:10:42] 2025-10-13 08:10:09,443 | INFO     | mean x: 1760337602.0
[2025-10-13 04:10:42] 2025-10-13 08:10:09,443 | INFO     | mean y: 2489645.2824858758
[2025-10-13 04:10:42] 2025-10-13 08:10:09,443 | INFO     | -- intersect: -8068172746.042714
[2025-10-13 04:10:42] 2025-10-13 08:10:09,443 | INFO     | intersect: -8068172746.042714
[2025-10-13 04:10:42] 2025-10-13 08:10:09,444 | INFO     | chi2: 0.01677374493039155
[2025-10-13 04:10:42] 2025-10-13 08:10:09,444 | INFO     | current chi2=0.01677374493039155 (change=98.63019329104682 %)
[2025-10-13 04:10:42] 2025-10-13 08:10:09,444 | INFO     | sum of square deviations: 1577789583.0
[2025-10-13 04:10:42] 2025-10-13 08:10:09,445 | INFO     | sum of deviations: 5856786107.000001
[2025-10-13 04:10:42] 2025-10-13 08:10:09,445 | INFO     | mean x: 1760337754.5
[2025-10-13 04:10:42] 2025-10-13 08:10:09,445 | INFO     | mean y: 2491777.023255814
[2025-10-13 04:10:42] 2025-10-13 08:10:09,445 | INFO     | -- intersect: -6531916749.479976
[2025-10-13 04:10:42] 2025-10-13 08:10:09,445 | INFO     | intersect: -6531916749.479976
[2025-10-13 04:10:42] 2025-10-13 08:10:09,446 | INFO     | chi2: 0.002074840373060069
[2025-10-13 04:10:42] 2025-10-13 08:10:09,446 | INFO     | current chi2=0.002074840373060069 (change=87.6304284960196 %)
[2025-10-13 04:10:42] 2025-10-13 08:10:09,446 | INFO     | sum of square deviations: 1444149868.0
[2025-10-13 04:10:42] 2025-10-13 08:10:09,447 | INFO     | sum of deviations: 5098058286.0
[2025-10-13 04:10:42] 2025-10-13 08:10:09,447 | INFO     | mean x: 1760337907.0
[2025-10-13 04:10:42] 2025-10-13 08:10:09,447 | INFO     | mean y: 2492653.389221557
[2025-10-13 04:10:42] 2025-10-13 08:10:09,447 | INFO     | -- intersect: -6211755224.754993
[2025-10-13 04:10:42] 2025-10-13 08:10:09,447 | INFO     | intersect: -6211755224.754993
[2025-10-13 04:10:42] 2025-10-13 08:10:09,447 | INFO     | chi2: 0.001042630895830656
[2025-10-13 04:10:42] 2025-10-13 08:10:09,448 | INFO     | current chi2=0.001042630895830656 (change=49.74886215979417 %)
[2025-10-13 04:10:42] 2025-10-13 08:10:09,448 | INFO     | sum of square deviations: 1318277740.5
[2025-10-13 04:10:42] 2025-10-13 08:10:09,449 | INFO     | sum of deviations: 4212372751.0
[2025-10-13 04:10:42] 2025-10-13 08:10:09,449 | INFO     | mean x: 1760338059.5
[2025-10-13 04:10:42] 2025-10-13 08:10:09,449 | INFO     | mean y: 2493724.2592592593
[2025-10-13 04:10:42] 2025-10-13 08:10:09,449 | INFO     | -- intersect: -5622421152.611497
[2025-10-13 04:10:42] 2025-10-13 08:10:09,449 | INFO     | intersect: -5622421152.611497
[2025-10-13 04:10:42] 2025-10-13 08:10:09,449 | INFO     | chi2: 0.0007493041188959166
[2025-10-13 04:10:42] 2025-10-13 08:10:09,449 | INFO     | current chi2=0.0007493041188959166 (change=28.13332868877325 %)
[2025-10-13 04:10:42] 2025-10-13 08:10:09,450 | INFO     | sum of square deviations: 1199940638.0
[2025-10-13 04:10:42] 2025-10-13 08:10:09,450 | INFO     | sum of deviations: 3598193274.999999
[2025-10-13 04:10:42] 2025-10-13 08:10:09,450 | INFO     | mean x: 1760338212.0
[2025-10-13 04:10:42] 2025-10-13 08:10:09,451 | INFO     | mean y: 2494514.6560509554
[2025-10-13 04:10:42] 2025-10-13 08:10:09,451 | INFO     | -- intersect: -5276130873.597466
[2025-10-13 04:10:42] 2025-10-13 08:10:09,451 | INFO     | intersect: -5276130873.597466
[2025-10-13 04:10:42] 2025-10-13 08:10:09,451 | INFO     | chi2: 0.0006594459086872232
[2025-10-13 04:10:42] 2025-10-13 08:10:09,451 | INFO     | current chi2=0.0006594459086872232 (change=11.992221575012497 %)
[2025-10-13 04:10:42] 2025-10-13 08:10:09,451 | INFO     | left removable region: 50
[2025-10-13 04:10:42] 2025-10-13 08:10:09,452 | INFO     | sum of square deviations: 620244187.5
[2025-10-13 04:10:42] 2025-10-13 08:10:09,452 | INFO     | sum of deviations: 1016759681.5
[2025-10-13 04:10:42] 2025-10-13 08:10:09,452 | INFO     | mean x: 1760338791.5
[2025-10-13 04:10:42] 2025-10-13 08:10:09,452 | INFO     | mean y: 2497971.3095238097
[2025-10-13 04:10:42] 2025-10-13 08:10:09,452 | INFO     | -- intersect: -2883206635.116369
[2025-10-13 04:10:42] 2025-10-13 08:10:09,453 | INFO     | intersect: -2883206635.116369
[2025-10-13 04:10:42] 2025-10-13 08:10:09,453 | INFO     | chi2: 4.376916299147999e-05
[2025-10-13 04:10:42] 2025-10-13 08:10:09,453 | INFO     | -- intersect: -2883206635.116369
[2025-10-13 04:10:42] 2025-10-13 08:10:09,453 | INFO     | current memory leak: 1.64 B/s (using 126 data points, chi2=0.00)
[2025-10-13 04:10:42] 2025-10-13 08:10:09,453 | INFO     | could have reported an average CPU frequency of 2390 MHz (10 samples)
[2025-10-13 04:10:42] 2025-10-13 08:10:09,454 | INFO     | ..............................
[2025-10-13 04:10:42] 2025-10-13 08:10:09,454 | INFO     | . Timing measurements:
[2025-10-13 04:10:42] 2025-10-13 08:10:09,454 | INFO     | . get job = 0 s
[2025-10-13 04:10:42] 2025-10-13 08:10:09,454 | INFO     | . initial setup = 2 s
[2025-10-13 04:10:42] 2025-10-13 08:10:09,454 | INFO     | . payload setup = 5 s
[2025-10-13 04:10:42] 2025-10-13 08:10:09,454 | INFO     | . stage-in = 0 s
[2025-10-13 04:10:42] 2025-10-13 08:10:09,454 | INFO     | . payload execution = 11075 s
[2025-10-13 04:10:42] 2025-10-13 08:10:09,454 | INFO     | . stage-out = 1 s
[2025-10-13 04:10:42] 2025-10-13 08:10:09,454 | INFO     | . log creation = 0 s
[2025-10-13 04:10:42] 2025-10-13 08:10:09,454 | INFO     | ..............................
[2025-10-13 04:10:42] 2025-10-13 08:10:09,535 | INFO     | 
[2025-10-13 04:10:42] 2025-10-13 08:10:09,535 | INFO     | job summary report
[2025-10-13 04:10:42] 2025-10-13 08:10:09,535 | INFO     | --------------------------------------------------
[2025-10-13 04:10:42] 2025-10-13 08:10:09,535 | INFO     | PanDA job id: 6841068966
[2025-10-13 04:10:42] 2025-10-13 08:10:09,535 | INFO     | task id: 46676269
[2025-10-13 04:10:42] 2025-10-13 08:10:09,535 | INFO     | errors: (none)
[2025-10-13 04:10:42] 2025-10-13 08:10:09,536 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 04:10:42] 2025-10-13 08:10:09,536 | INFO     | pilot state: finished 
[2025-10-13 04:10:42] 2025-10-13 08:10:09,536 | INFO     | transexitcode: 0
[2025-10-13 04:10:42] 2025-10-13 08:10:09,536 | INFO     | exeerrorcode: 0
[2025-10-13 04:10:42] 2025-10-13 08:10:09,536 | INFO     | exeerrordiag: 
[2025-10-13 04:10:42] 2025-10-13 08:10:09,536 | INFO     | exitcode: 0
[2025-10-13 04:10:42] 2025-10-13 08:10:09,536 | INFO     | exitmsg: OK
[2025-10-13 04:10:42] 2025-10-13 08:10:09,536 | INFO     | cpuconsumptiontime: 83151 s
[2025-10-13 04:10:42] 2025-10-13 08:10:09,536 | INFO     | nevents: 400
[2025-10-13 04:10:42] 2025-10-13 08:10:09,536 | INFO     | neventsw: 0
[2025-10-13 04:10:42] 2025-10-13 08:10:09,536 | INFO     | pid: 14658
[2025-10-13 04:10:42] 2025-10-13 08:10:09,537 | INFO     | pgrp: 14658
[2025-10-13 04:10:42] 2025-10-13 08:10:09,537 | INFO     | corecount: 8
[2025-10-13 04:10:42] 2025-10-13 08:10:09,537 | INFO     | event service: False
[2025-10-13 04:10:42] 2025-10-13 08:10:09,537 | INFO     | sizes: {0: 2348856, 3: 2349118, 11: 2349146, 11084: 2378392, 11086: 2387446, 11090: 2387584}
[2025-10-13 04:10:42] 2025-10-13 08:10:09,537 | INFO     | --------------------------------------------------
[2025-10-13 04:10:42] 2025-10-13 08:10:09,537 | INFO     | 
[2025-10-13 04:10:42] 2025-10-13 08:10:09,537 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 04:10:42] 2025-10-13 08:10:09,550 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 04:10:42] 2025-10-13 08:10:09,550 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 04:10:42] 2025-10-13 08:10:09,550 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 04:10:42] 2025-10-13 08:10:09,551 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 04:10:42] 2025-10-13 08:10:09,551 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 04:10:42] 2025-10-13 08:10:09,551 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 04:10:42] 2025-10-13 08:10:09,551 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 04:10:42] 2025-10-13 08:10:09,551 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 04:10:42] 2025-10-13 08:10:09,551 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 04:10:42] 2025-10-13 08:10:09,551 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 04:10:42] 2025-10-13 08:10:09,551 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 04:10:42] 2025-10-13 08:10:09,551 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 04:10:42] 2025-10-13 08:10:09,552 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 04:10:42] 2025-10-13 08:10:09,552 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 04:10:42] 2025-10-13 08:10:09,552 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 04:10:42] 2025-10-13 08:10:09,552 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 04:10:42] 2025-10-13 08:10:09,552 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 04:10:42] 2025-10-13 08:10:09,552 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 04:10:42] 2025-10-13 08:10:09,552 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 04:10:42] 2025-10-13 08:10:09,552 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 04:10:42] 2025-10-13 08:10:09,552 | INFO     | job 6841068966 has completed (purged errors)
[2025-10-13 04:10:42] 2025-10-13 08:10:09,553 | INFO     | overall cleanup function is called
[2025-10-13 04:10:42] 2025-10-13 08:10:10,149 | INFO     | PID=5406 has CPU usage=7.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-13 04:10:42] 2025-10-13 08:10:10,149 | INFO     | .. there are 3 such processes running
[2025-10-13 04:10:42] 2025-10-13 08:10:10,559 | INFO     | --- collectZombieJob: --- 10, [14658]
[2025-10-13 04:10:42] 2025-10-13 08:10:10,560 | INFO     | zombie collector waiting for pid 14658
[2025-10-13 04:10:42] 2025-10-13 08:10:10,560 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 04:10:42] 2025-10-13 08:10:10,560 | INFO     | collected zombie processes
[2025-10-13 04:10:42] 2025-10-13 08:10:10,560 | INFO     | will attempt to kill all subprocesses of pid=14658
[2025-10-13 04:10:42] 2025-10-13 08:10:10,669 | INFO     | process IDs to be killed: [14658] (in reverse order)
[2025-10-13 04:10:42] 2025-10-13 08:10:10,709 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 04:10:42] 2025-10-13 08:10:10,709 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 04:10:42] 2025-10-13 08:10:10,712 | INFO     | did not find any defunct processes belonging to 14658
[2025-10-13 04:10:42] 2025-10-13 08:10:10,714 | INFO     | did not find any defunct processes belonging to 14658
[2025-10-13 04:10:42] 2025-10-13 08:10:10,715 | INFO     | ready for new job
[2025-10-13 04:10:42] 2025-10-13 08:10:10,715 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 04:10:42] 2025-10-13 08:10:10,716 | INFO     | ***************************************
[2025-10-13 04:10:42] 2025-10-13 08:10:10,716 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 04:10:42] 2025-10-13 08:10:10,716 | INFO     | ***************************************
[2025-10-13 04:10:42] 2025-10-13 08:10:10,716 | INFO     | 
[2025-10-13 04:10:42] 2025-10-13 08:10:10,717 | INFO     | architecture information:
[2025-10-13 04:10:42] 2025-10-13 08:10:10,717 | INFO     | executing command: cat /etc/os-release
[2025-10-13 04:10:42] 2025-10-13 08:10:10,727 | INFO     | cat /etc/os-release:
[2025-10-13 04:10:42] NAME="CentOS Linux"
[2025-10-13 04:10:42] VERSION="7 (Core)"
[2025-10-13 04:10:42] ID="centos"
[2025-10-13 04:10:42] ID_LIKE="rhel fedora"
[2025-10-13 04:10:42] VERSION_ID="7"
[2025-10-13 04:10:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 04:10:42] ANSI_COLOR="0;31"
[2025-10-13 04:10:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 04:10:42] HOME_URL="https://www.centos.org/"
[2025-10-13 04:10:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 04:10:42] 
[2025-10-13 04:10:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 04:10:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 04:10:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 04:10:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 04:10:42] 
[2025-10-13 04:10:42] 2025-10-13 08:10:10,727 | INFO     | ***************************************
[2025-10-13 04:10:42] 2025-10-13 08:10:11,230 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 04:10:42] 2025-10-13 08:10:11,242 | INFO     | sufficient remaining disk space (27858567168 B)
[2025-10-13 04:10:42] 2025-10-13 08:10:11,242 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 04:10:42] 2025-10-13 08:10:11,242 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 04:10:42] 2025-10-13 08:10:11,242 | INFO     | update_server=False
[2025-10-13 04:10:42] 2025-10-13 08:10:11,242 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 04:10:42] 2025-10-13 08:10:11,243 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 04:10:42] 2025-10-13 08:10:11,243 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 04:10:42] 2025-10-13 08:10:11,243 | INFO     | aborting loop
[2025-10-13 04:10:42] 2025-10-13 08:10:11,505 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 04:10:42] 2025-10-13 08:10:11,796 | INFO     | all payload control threads have been joined
[2025-10-13 04:10:42] 2025-10-13 08:10:11,930 | INFO     | all job control threads have been joined
[2025-10-13 04:10:42] 2025-10-13 08:10:12,128 | INFO     | all data control threads have been joined
[2025-10-13 04:10:42] 2025-10-13 08:10:12,247 | INFO     | [job] job monitor thread has finished
[2025-10-13 04:10:42] 2025-10-13 08:10:12,248 | INFO     | [job] retrieve thread has finished
[2025-10-13 04:10:42] 2025-10-13 08:10:12,248 | INFO     | [job] queue monitor thread has finished
[2025-10-13 04:10:42] 2025-10-13 08:10:12,292 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 04:10:42] 2025-10-13 08:10:12,327 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 04:10:42] 2025-10-13 08:10:12,353 | INFO     | [job] validate thread has finished
[2025-10-13 04:10:42] 2025-10-13 08:10:12,531 | INFO     | [payload] failed_post thread has finished
[2025-10-13 04:10:42] 2025-10-13 08:10:12,660 | INFO     | [data] copytool_in thread has finished
[2025-10-13 04:10:42] 2025-10-13 08:10:12,681 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 04:10:42] 2025-10-13 08:10:12,802 | INFO     | [payload] control thread has finished
[2025-10-13 04:10:42] 2025-10-13 08:10:12,856 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 04:10:42] 2025-10-13 08:10:12,936 | INFO     | [job] control thread has finished
[2025-10-13 04:10:42] 2025-10-13 08:10:13,063 | INFO     | [payload] validate_post thread has finished
[2025-10-13 04:10:42] 2025-10-13 08:10:13,133 | INFO     | [data] control thread has finished
[2025-10-13 04:10:42] 2025-10-13 08:10:13,511 | INFO     | [data] copytool_out thread has finished
[2025-10-13 04:10:42] 2025-10-13 08:10:16,298 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 04:10:42] 2025-10-13 08:10:21,711 | INFO     | job.realtimelogging is not enabled
[2025-10-13 04:10:42] 2025-10-13 08:10:22,715 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 04:10:42] 2025-10-13 08:10:22,942 | INFO     | [monitor] cgroup control has ended
[2025-10-13 04:10:42] 2025-10-13 08:10:23,924 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139627291203392)>', '<ExcThread(monitor, started 139626559825664)>']
[2025-10-13 04:10:42] 2025-10-13 08:10:28,932 | INFO     | all workflow threads have been joined
[2025-10-13 04:10:42] 2025-10-13 08:10:28,932 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 04:10:42] 2025-10-13 08:10:28,933 | INFO     | traces error code: 0
[2025-10-13 04:10:42] 2025-10-13 08:10:28,933 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 04:10:42] 2025-10-13 08:10:42,364 | INFO     | PID=5406 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-13 04:10:42] 2025-10-13 08:10:42,364 | INFO     | .. there are 3 such processes running
[2025-10-13 04:10:42] 2025-10-13 08:10:42,364 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 04:10:42] 2025-10-13 08:10:42,364 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 04:10:42] 2025-10-13 08:10:42,364 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 04:10:42] 2025-10-13 08:10:42,365 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 04:10:42] 2025-10-13 08:10:42,365 | INFO     | [monitor] control thread has ended
[2025-10-13 04:10:42] 2025-10-13 08:10:42,441 [wrapper] ==== pilot stdout END ====
[2025-10-13 04:10:42] 2025-10-13 08:10:42,443 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 04:10:42] 2025-10-13 08:10:42,445 [wrapper] pilotpid: 5406
[2025-10-13 04:10:42] 2025-10-13 08:10:42,447 [wrapper] Pilot exit status: 0
[2025-10-13 04:10:42] 2025-10-13 08:10:42,455 [wrapper] pandaids: 6841068966
[2025-10-13 04:10:42] 2025-10-13 08:10:42,482 [wrapper] cleanup supervisor_pilot 14519 5407
[2025-10-13 04:10:42] 2025-10-13 08:10:42,484 [wrapper] Test setup, not cleaning
[2025-10-13 04:10:42] 2025-10-13 08:10:42,486 [wrapper] apfmon messages muted
[2025-10-13 04:10:42] 2025-10-13 08:10:42,488 [wrapper] ==== wrapper stdout END ====
[2025-10-13 04:10:42] 2025-10-13 08:10:42,490 [wrapper] ==== wrapper stderr END ====
[2025-10-13 04:10:42]  *** Error codes and diagnostics ***
[2025-10-13 04:10:42]     "exeErrorCode": 0,
[2025-10-13 04:10:42]     "exeErrorDiag": "",
[2025-10-13 04:10:42]     "pilotErrorCode": 0,
[2025-10-13 04:10:42]     "pilotErrorDiag": "",
[2025-10-13 04:10:42]  *** Listing of results directory ***
[2025-10-13 04:10:42] total 415040
[2025-10-13 04:10:42] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 20:11 pilot3.tar.gz
[2025-10-13 04:10:42] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 20:26 queuedata.json
[2025-10-13 04:10:42] -rwx------ 1 boincer umatlas     36292 Oct 12 20:27 runpilot2-wrapper.sh
[2025-10-13 04:10:42] -rw-r--r-- 1 boincer umatlas       100 Oct 13 01:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 04:10:42] -rwxr-xr-x 1 boincer umatlas      7986 Oct 13 01:04 run_atlas
[2025-10-13 04:10:42] -rw-r--r-- 1 boincer umatlas       105 Oct 13 01:04 job.xml
[2025-10-13 04:10:42] -rw-r--r-- 2 boincer umatlas 222342608 Oct 13 01:04 EVNT.46676267._004693.pool.root.1
[2025-10-13 04:10:42] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 01:04 start_atlas.sh
[2025-10-13 04:10:42] drwxrwx--x 2 boincer umatlas      4096 Oct 13 01:04 shared
[2025-10-13 04:10:42] -rw-r--r-- 2 boincer umatlas    569680 Oct 13 01:04 input.tar.gz
[2025-10-13 04:10:42] -rw-r--r-- 1 boincer umatlas         0 Oct 13 01:04 boinc_lockfile
[2025-10-13 04:10:42] -rw-r--r-- 1 boincer umatlas      2549 Oct 13 01:04 pandaJob.out
[2025-10-13 04:10:42] -rw------- 1 boincer umatlas    974365 Oct 13 01:05 agis_schedconf.cvmfs.json
[2025-10-13 04:10:42] drwx------ 5 boincer umatlas      4096 Oct 13 01:05 pilot3
[2025-10-13 04:10:42] -rw-r--r-- 1 boincer umatlas      5952 Oct 13 04:02 init_data.xml
[2025-10-13 04:10:42] -rw------- 1 boincer umatlas 194767318 Oct 13 04:09 HITS.46676269._093175.pool.root.1
[2025-10-13 04:10:42] -rw-r--r-- 1 boincer umatlas       530 Oct 13 04:09 boinc_task_state.xml
[2025-10-13 04:10:42] -rw------- 1 boincer umatlas        95 Oct 13 04:09 pilot_heartbeat.json
[2025-10-13 04:10:42] -rw------- 1 boincer umatlas      1054 Oct 13 04:10 memory_monitor_summary.json
[2025-10-13 04:10:42] -rw------- 1 boincer umatlas   1560580 Oct 13 04:10 agis_ddmendpoints.agis.ALL.json
[2025-10-13 04:10:42] -rw------- 1 boincer umatlas    438230 Oct 13 04:10 log.46676269._093175.job.log.tgz.1
[2025-10-13 04:10:42] -rw------- 1 boincer umatlas      7857 Oct 13 04:10 heartbeat.json
[2025-10-13 04:10:42] -rw-r--r-- 1 boincer umatlas      8192 Oct 13 04:10 boinc_mmap_file
[2025-10-13 04:10:42] -rw-r--r-- 1 boincer umatlas        28 Oct 13 04:10 wrapper_checkpoint.txt
[2025-10-13 04:10:42] -rw------- 1 boincer umatlas       819 Oct 13 04:10 pilotlog.txt
[2025-10-13 04:10:42] -rw------- 1 boincer umatlas   1562403 Oct 13 04:10 log.46676269._093175.job.log.1
[2025-10-13 04:10:42] -rw------- 1 boincer umatlas       357 Oct 13 04:10 output.list
[2025-10-13 04:10:42] -rw-r--r-- 1 boincer umatlas       620 Oct 13 04:10 runtime_log
[2025-10-13 04:10:42] -rw------- 1 boincer umatlas   2017280 Oct 13 04:10 result.tar.gz
[2025-10-13 04:10:42] -rw------- 1 boincer umatlas       662 Oct 13 04:10 T5ILDmYaLS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmwBmNDmwNJRWn.diag
[2025-10-13 04:10:42] -rw-r--r-- 1 boincer umatlas      8704 Oct 13 04:10 runtime_log.err
[2025-10-13 04:10:42] -rw-r--r-- 1 boincer umatlas     21000 Oct 13 04:10 stderr.txt
[2025-10-13 04:10:42] HITS file was successfully produced:
[2025-10-13 04:10:42] -rw------- 1 boincer umatlas 194767318 Oct 13 04:09 shared/HITS.pool.root.1
[2025-10-13 04:10:42]  *** Contents of shared directory: ***
[2025-10-13 04:10:42] total 409888
[2025-10-13 04:10:42] -rw-r--r-- 2 boincer umatlas 222342608 Oct 13 01:04 ATLAS.root_0
[2025-10-13 04:10:42] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 01:04 start_atlas.sh
[2025-10-13 04:10:42] -rw-r--r-- 2 boincer umatlas    569680 Oct 13 01:04 input.tar.gz
[2025-10-13 04:10:42] -rw------- 1 boincer umatlas 194767318 Oct 13 04:09 HITS.pool.root.1
[2025-10-13 04:10:42] -rw------- 1 boincer umatlas   2017280 Oct 13 04:10 result.tar.gz
04:10:44 (1329): run_atlas exited; CPU time 83281.356505
04:10:44 (1329): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN