Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
01:03:16 (9665): wrapper (7.7.26015): starting
01:03:16 (9665): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 01:03:16] Arguments: --nthreads 8
[2025-10-13 01:03:16] Threads: 8
[2025-10-13 01:03:16] Checking for CVMFS
[2025-10-13 01:03:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 01:03:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 01:03:16] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 01:03:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 01:03:16] 2.11.2.0 2934 113019 81992 151649 3 59 15569733 20275201 1 130560 1 50892635 99.986 3890886 21377 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 01:03:16] CVMFS is ok
[2025-10-13 01:03:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 01:03:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 01:03:16] Further information can be found at the LHC@home message board.
[2025-10-13 01:03:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 01:03:16] Checking for apptainer binary...
[2025-10-13 01:03:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 01:03:16] Running /usr/bin/apptainer --version
[2025-10-13 01:03:16] apptainer version 1.3.2-1.el7
[2025-10-13 01:03:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 01:03:18] c-204-33.aglt2.org
[2025-10-13 01:03:18] apptainer works
[2025-10-13 01:03:18] Set ATHENA_PROC_NUMBER=8
[2025-10-13 01:03:18] Set ATHENA_CORE_NUMBER=8
[2025-10-13 01:03:18] Starting ATLAS job with PandaID=6841068988
[2025-10-13 01:03:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 03:08:53]  *** The last 200 lines of the pilot log: ***
[2025-10-13 03:08:53] 2025-10-13 07:08:00,728 | INFO     | -- intersect: -47926448863.05781
[2025-10-13 03:08:53] 2025-10-13 07:08:00,728 | INFO     | intersect: -47926448863.05781
[2025-10-13 03:08:53] 2025-10-13 07:08:00,728 | INFO     | chi2: 1.40249066091054
[2025-10-13 03:08:53] 2025-10-13 07:08:00,729 | INFO     | sum of square deviations: 496597218.0
[2025-10-13 03:08:53] 2025-10-13 07:08:00,729 | INFO     | sum of deviations: 14648748376.000002
[2025-10-13 03:08:53] 2025-10-13 07:08:00,729 | INFO     | mean x: 1760335384.0
[2025-10-13 03:08:53] 2025-10-13 07:08:00,730 | INFO     | mean y: 2471948.6923076925
[2025-10-13 03:08:53] 2025-10-13 07:08:00,730 | INFO     | -- intersect: -51924339485.00634
[2025-10-13 03:08:53] 2025-10-13 07:08:00,730 | INFO     | intersect: -51924339485.00634
[2025-10-13 03:08:53] 2025-10-13 07:08:00,730 | INFO     | chi2: 1.4047073521414177
[2025-10-13 03:08:53] 2025-10-13 07:08:00,730 | INFO     | current chi2=1.4047073521414177 (change=-0.1580539031495938 %)
[2025-10-13 03:08:53] 2025-10-13 07:08:00,730 | INFO     | right removable region: 116
[2025-10-13 03:08:53] 2025-10-13 07:08:00,731 | INFO     | sum of square deviations: 496597218.0
[2025-10-13 03:08:53] 2025-10-13 07:08:00,731 | INFO     | sum of deviations: -1752077257.9999993
[2025-10-13 03:08:53] 2025-10-13 07:08:00,731 | INFO     | mean x: 1760335689.0
[2025-10-13 03:08:53] 2025-10-13 07:08:00,731 | INFO     | mean y: 2511937.8803418805
[2025-10-13 03:08:53] 2025-10-13 07:08:00,731 | INFO     | -- intersect: 6213267889.281301
[2025-10-13 03:08:53] 2025-10-13 07:08:00,732 | INFO     | intersect: 6213267889.281301
[2025-10-13 03:08:53] 2025-10-13 07:08:00,732 | INFO     | chi2: 0.04145038322045726
[2025-10-13 03:08:53] 2025-10-13 07:08:00,732 | INFO     | current chi2=0.04145038322045726 (change=97.04451627552754 %)
[2025-10-13 03:08:53] 2025-10-13 07:08:00,732 | INFO     | sum of square deviations: 435610028.0
[2025-10-13 03:08:53] 2025-10-13 07:08:00,733 | INFO     | sum of deviations: 901411945.0
[2025-10-13 03:08:53] 2025-10-13 07:08:00,733 | INFO     | mean x: 1760335841.5
[2025-10-13 03:08:53] 2025-10-13 07:08:00,733 | INFO     | mean y: 2505195.160714286
[2025-10-13 03:08:53] 2025-10-13 07:08:00,733 | INFO     | -- intersect: -3640174386.907417
[2025-10-13 03:08:53] 2025-10-13 07:08:00,733 | INFO     | intersect: -3640174386.907417
[2025-10-13 03:08:53] 2025-10-13 07:08:00,733 | INFO     | chi2: 0.011892111661463995
[2025-10-13 03:08:53] 2025-10-13 07:08:00,734 | INFO     | current chi2=0.011892111661463995 (change=71.31000792389585 %)
[2025-10-13 03:08:53] 2025-10-13 07:08:00,734 | INFO     | sum of square deviations: 379832238.0
[2025-10-13 03:08:53] 2025-10-13 07:08:00,734 | INFO     | sum of deviations: 1342923784.0000002
[2025-10-13 03:08:53] 2025-10-13 07:08:00,734 | INFO     | mean x: 1760335994.0
[2025-10-13 03:08:53] 2025-10-13 07:08:00,735 | INFO     | mean y: 2504079.85046729
[2025-10-13 03:08:53] 2025-10-13 07:08:00,735 | INFO     | -- intersect: -6221288525.594154
[2025-10-13 03:08:53] 2025-10-13 07:08:00,735 | INFO     | intersect: -6221288525.594154
[2025-10-13 03:08:53] 2025-10-13 07:08:00,735 | INFO     | chi2: 0.0003727766872247165
[2025-10-13 03:08:53] 2025-10-13 07:08:00,735 | INFO     | current chi2=0.0003727766872247165 (change=96.86534487871748 %)
[2025-10-13 03:08:53] 2025-10-13 07:08:00,735 | INFO     | sum of square deviations: 329031285.5
[2025-10-13 03:08:53] 2025-10-13 07:08:00,736 | INFO     | sum of deviations: 1027437335.0000001
[2025-10-13 03:08:53] 2025-10-13 07:08:00,736 | INFO     | mean x: 1760336146.5
[2025-10-13 03:08:53] 2025-10-13 07:08:00,736 | INFO     | mean y: 2505026.4901960786
[2025-10-13 03:08:53] 2025-10-13 07:08:00,736 | INFO     | -- intersect: -5494343324.315429
[2025-10-13 03:08:53] 2025-10-13 07:08:00,736 | INFO     | intersect: -5494343324.315429
[2025-10-13 03:08:53] 2025-10-13 07:08:00,737 | INFO     | chi2: 0.0003050546999330352
[2025-10-13 03:08:53] 2025-10-13 07:08:00,737 | INFO     | current chi2=0.0003050546999330352 (change=18.166905177430593 %)
[2025-10-13 03:08:53] 2025-10-13 07:08:00,737 | INFO     | left removable region: 40
[2025-10-13 03:08:53] 2025-10-13 07:08:00,737 | INFO     | sum of square deviations: 136095575.0
[2025-10-13 03:08:53] 2025-10-13 07:08:00,737 | INFO     | sum of deviations: 184958648.99999997
[2025-10-13 03:08:53] 2025-10-13 07:08:00,738 | INFO     | mean x: 1760336573.5
[2025-10-13 03:08:53] 2025-10-13 07:08:00,738 | INFO     | mean y: 2507956.6578947366
[2025-10-13 03:08:53] 2025-10-13 07:08:00,738 | INFO     | -- intersect: -2389851048.5474486
[2025-10-13 03:08:53] 2025-10-13 07:08:00,738 | INFO     | intersect: -2389851048.5474486
[2025-10-13 03:08:53] 2025-10-13 07:08:00,738 | INFO     | chi2: 8.692076159296236e-05
[2025-10-13 03:08:53] 2025-10-13 07:08:00,738 | INFO     | -- intersect: -2389851048.5474486
[2025-10-13 03:08:53] 2025-10-13 07:08:00,738 | INFO     | current memory leak: 1.36 B/s (using 76 data points, chi2=0.00)
[2025-10-13 03:08:53] 2025-10-13 07:08:00,739 | INFO     | could have reported an average CPU frequency of 1983 MHz (8 samples)
[2025-10-13 03:08:53] 2025-10-13 07:08:00,739 | INFO     | ..............................
[2025-10-13 03:08:53] 2025-10-13 07:08:00,739 | INFO     | . Timing measurements:
[2025-10-13 03:08:53] 2025-10-13 07:08:00,739 | INFO     | . get job = 0 s
[2025-10-13 03:08:53] 2025-10-13 07:08:00,739 | INFO     | . initial setup = 2 s
[2025-10-13 03:08:53] 2025-10-13 07:08:00,740 | INFO     | . payload setup = 8 s
[2025-10-13 03:08:53] 2025-10-13 07:08:00,740 | INFO     | . stage-in = 0 s
[2025-10-13 03:08:53] 2025-10-13 07:08:00,740 | INFO     | . payload execution = 7428 s
[2025-10-13 03:08:53] 2025-10-13 07:08:00,740 | INFO     | . stage-out = 0 s
[2025-10-13 03:08:53] 2025-10-13 07:08:00,740 | INFO     | . log creation = 0 s
[2025-10-13 03:08:53] 2025-10-13 07:08:00,740 | INFO     | ..............................
[2025-10-13 03:08:53] 2025-10-13 07:08:00,832 | INFO     | 
[2025-10-13 03:08:53] 2025-10-13 07:08:00,832 | INFO     | job summary report
[2025-10-13 03:08:53] 2025-10-13 07:08:00,833 | INFO     | --------------------------------------------------
[2025-10-13 03:08:53] 2025-10-13 07:08:00,833 | INFO     | PanDA job id: 6841068988
[2025-10-13 03:08:53] 2025-10-13 07:08:00,833 | INFO     | task id: 46676269
[2025-10-13 03:08:53] 2025-10-13 07:08:00,833 | INFO     | errors: (none)
[2025-10-13 03:08:53] 2025-10-13 07:08:00,833 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 03:08:53] 2025-10-13 07:08:00,834 | INFO     | pilot state: finished 
[2025-10-13 03:08:53] 2025-10-13 07:08:00,834 | INFO     | transexitcode: 0
[2025-10-13 03:08:53] 2025-10-13 07:08:00,834 | INFO     | exeerrorcode: 0
[2025-10-13 03:08:53] 2025-10-13 07:08:00,834 | INFO     | exeerrordiag: 
[2025-10-13 03:08:53] 2025-10-13 07:08:00,834 | INFO     | exitcode: 0
[2025-10-13 03:08:53] 2025-10-13 07:08:00,834 | INFO     | exitmsg: OK
[2025-10-13 03:08:53] 2025-10-13 07:08:00,835 | INFO     | cpuconsumptiontime: 55736 s
[2025-10-13 03:08:53] 2025-10-13 07:08:00,835 | INFO     | nevents: 400
[2025-10-13 03:08:53] 2025-10-13 07:08:00,835 | INFO     | neventsw: 0
[2025-10-13 03:08:53] 2025-10-13 07:08:00,835 | INFO     | pid: 20772
[2025-10-13 03:08:53] 2025-10-13 07:08:00,835 | INFO     | pgrp: 20772
[2025-10-13 03:08:53] 2025-10-13 07:08:00,835 | INFO     | corecount: 8
[2025-10-13 03:08:53] 2025-10-13 07:08:00,835 | INFO     | event service: False
[2025-10-13 03:08:53] 2025-10-13 07:08:00,835 | INFO     | sizes: {0: 2348857, 6: 2349119, 11: 2349147, 7441: 2376537, 7442: 2385591, 7449: 2385729}
[2025-10-13 03:08:53] 2025-10-13 07:08:00,836 | INFO     | --------------------------------------------------
[2025-10-13 03:08:53] 2025-10-13 07:08:00,836 | INFO     | 
[2025-10-13 03:08:53] 2025-10-13 07:08:00,836 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 03:08:53] 2025-10-13 07:08:00,861 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 03:08:53] 2025-10-13 07:08:00,862 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 03:08:53] 2025-10-13 07:08:00,862 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 03:08:53] 2025-10-13 07:08:00,862 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 03:08:53] 2025-10-13 07:08:00,862 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 03:08:53] 2025-10-13 07:08:00,862 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 03:08:53] 2025-10-13 07:08:00,862 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 03:08:53] 2025-10-13 07:08:00,863 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 03:08:53] 2025-10-13 07:08:00,863 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 03:08:53] 2025-10-13 07:08:00,863 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 03:08:53] 2025-10-13 07:08:00,863 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 03:08:53] 2025-10-13 07:08:00,863 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 03:08:53] 2025-10-13 07:08:00,864 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 03:08:53] 2025-10-13 07:08:00,864 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 03:08:53] 2025-10-13 07:08:00,864 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 03:08:53] 2025-10-13 07:08:00,864 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 03:08:53] 2025-10-13 07:08:00,864 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 03:08:53] 2025-10-13 07:08:00,864 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 03:08:53] 2025-10-13 07:08:00,865 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 03:08:53] 2025-10-13 07:08:00,865 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 03:08:53] 2025-10-13 07:08:00,865 | INFO     | job 6841068988 has completed (purged errors)
[2025-10-13 03:08:53] 2025-10-13 07:08:00,865 | INFO     | overall cleanup function is called
[2025-10-13 03:08:53] 2025-10-13 07:08:01,873 | INFO     | --- collectZombieJob: --- 10, [20772]
[2025-10-13 03:08:53] 2025-10-13 07:08:01,874 | INFO     | zombie collector waiting for pid 20772
[2025-10-13 03:08:53] 2025-10-13 07:08:01,874 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 03:08:53] 2025-10-13 07:08:01,874 | INFO     | collected zombie processes
[2025-10-13 03:08:53] 2025-10-13 07:08:01,874 | INFO     | will attempt to kill all subprocesses of pid=20772
[2025-10-13 03:08:53] 2025-10-13 07:08:01,967 | INFO     | process IDs to be killed: [20772] (in reverse order)
[2025-10-13 03:08:53] 2025-10-13 07:08:02,023 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 03:08:53] 2025-10-13 07:08:02,023 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 03:08:53] 2025-10-13 07:08:02,028 | INFO     | did not find any defunct processes belonging to 20772
[2025-10-13 03:08:53] 2025-10-13 07:08:02,031 | INFO     | did not find any defunct processes belonging to 20772
[2025-10-13 03:08:53] 2025-10-13 07:08:02,031 | INFO     | ready for new job
[2025-10-13 03:08:53] 2025-10-13 07:08:02,032 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 03:08:53] 2025-10-13 07:08:02,034 | INFO     | ***************************************
[2025-10-13 03:08:53] 2025-10-13 07:08:02,034 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 03:08:53] 2025-10-13 07:08:02,034 | INFO     | ***************************************
[2025-10-13 03:08:53] 2025-10-13 07:08:02,034 | INFO     | 
[2025-10-13 03:08:53] 2025-10-13 07:08:02,035 | INFO     | architecture information:
[2025-10-13 03:08:53] 2025-10-13 07:08:02,035 | INFO     | executing command: cat /etc/os-release
[2025-10-13 03:08:53] 2025-10-13 07:08:02,053 | INFO     | cat /etc/os-release:
[2025-10-13 03:08:53] NAME="CentOS Linux"
[2025-10-13 03:08:53] VERSION="7 (Core)"
[2025-10-13 03:08:53] ID="centos"
[2025-10-13 03:08:53] ID_LIKE="rhel fedora"
[2025-10-13 03:08:53] VERSION_ID="7"
[2025-10-13 03:08:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 03:08:53] ANSI_COLOR="0;31"
[2025-10-13 03:08:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 03:08:53] HOME_URL="https://www.centos.org/"
[2025-10-13 03:08:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 03:08:53] 
[2025-10-13 03:08:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 03:08:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 03:08:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 03:08:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 03:08:53] 
[2025-10-13 03:08:53] 2025-10-13 07:08:02,053 | INFO     | ***************************************
[2025-10-13 03:08:53] 2025-10-13 07:08:02,556 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 03:08:53] 2025-10-13 07:08:02,576 | INFO     | sufficient remaining disk space (18593349632 B)
[2025-10-13 03:08:53] 2025-10-13 07:08:02,577 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 03:08:53] 2025-10-13 07:08:02,577 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 03:08:53] 2025-10-13 07:08:02,577 | INFO     | update_server=False
[2025-10-13 03:08:53] 2025-10-13 07:08:02,578 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 03:08:53] 2025-10-13 07:08:02,578 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 03:08:53] 2025-10-13 07:08:02,578 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 03:08:53] 2025-10-13 07:08:02,579 | INFO     | aborting loop
[2025-10-13 03:08:53] 2025-10-13 07:08:02,579 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 03:08:53] 2025-10-13 07:08:02,929 | INFO     | all data control threads have been joined
[2025-10-13 03:08:53] 2025-10-13 07:08:03,252 | INFO     | all job control threads have been joined
[2025-10-13 03:08:53] 2025-10-13 07:08:03,579 | INFO     | [job] queue monitor thread has finished
[2025-10-13 03:08:53] 2025-10-13 07:08:03,583 | INFO     | [job] retrieve thread has finished
[2025-10-13 03:08:53] 2025-10-13 07:08:03,584 | INFO     | [job] job monitor thread has finished
[2025-10-13 03:08:53] 2025-10-13 07:08:03,674 | INFO     | [data] copytool_in thread has finished
[2025-10-13 03:08:53] 2025-10-13 07:08:03,689 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 03:08:53] 2025-10-13 07:08:03,795 | INFO     | [payload] failed_post thread has finished
[2025-10-13 03:08:53] 2025-10-13 07:08:03,935 | INFO     | [data] control thread has finished
[2025-10-13 03:08:53] 2025-10-13 07:08:04,057 | INFO     | all payload control threads have been joined
[2025-10-13 03:08:53] 2025-10-13 07:08:04,063 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 03:08:53] 2025-10-13 07:08:04,258 | INFO     | [job] control thread has finished
[2025-10-13 03:08:53] 2025-10-13 07:08:04,329 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 03:08:53] 2025-10-13 07:08:04,585 | INFO     | [data] copytool_out thread has finished
[2025-10-13 03:08:53] 2025-10-13 07:08:04,860 | INFO     | [job] validate thread has finished
[2025-10-13 03:08:53] 2025-10-13 07:08:04,894 | INFO     | [payload] validate_post thread has finished
[2025-10-13 03:08:53] 2025-10-13 07:08:05,062 | INFO     | [payload] control thread has finished
[2025-10-13 03:08:53] 2025-10-13 07:08:05,077 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 03:08:53] 2025-10-13 07:08:08,335 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 03:08:53] 2025-10-13 07:08:13,499 | INFO     | job.realtimelogging is not enabled
[2025-10-13 03:08:53] 2025-10-13 07:08:14,505 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 03:08:53] 2025-10-13 07:08:32,154 | INFO     | PID=13332 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-13 03:08:53] 2025-10-13 07:08:32,155 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 03:08:53] 2025-10-13 07:08:32,155 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 03:08:53] 2025-10-13 07:08:32,155 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 03:08:53] 2025-10-13 07:08:46,980 | INFO     | [monitor] cgroup control has ended
[2025-10-13 03:08:53] 2025-10-13 07:08:48,003 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140060490491712)>', '<ExcThread(monitor, started 140059722364672)>']
[2025-10-13 03:08:53] 2025-10-13 07:08:48,234 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 03:08:53] 2025-10-13 07:08:48,235 | INFO     | [monitor] control thread has ended
[2025-10-13 03:08:53] 2025-10-13 07:08:53,029 | INFO     | all workflow threads have been joined
[2025-10-13 03:08:53] 2025-10-13 07:08:53,029 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 03:08:53] 2025-10-13 07:08:53,029 | INFO     | traces error code: 0
[2025-10-13 03:08:53] 2025-10-13 07:08:53,030 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 03:08:53] 2025-10-13 07:08:53,145 [wrapper] ==== pilot stdout END ====
[2025-10-13 03:08:53] 2025-10-13 07:08:53,150 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 03:08:53] 2025-10-13 07:08:53,155 [wrapper] pilotpid: 13332
[2025-10-13 03:08:53] 2025-10-13 07:08:53,159 [wrapper] Pilot exit status: 0
[2025-10-13 03:08:53] 2025-10-13 07:08:53,177 [wrapper] pandaids: 6841068988
[2025-10-13 03:08:53] 2025-10-13 07:08:53,225 [wrapper] cleanup supervisor_pilot 20209 13333
[2025-10-13 03:08:53] 2025-10-13 07:08:53,230 [wrapper] Test setup, not cleaning
[2025-10-13 03:08:53] 2025-10-13 07:08:53,235 [wrapper] apfmon messages muted
[2025-10-13 03:08:53] 2025-10-13 07:08:53,240 [wrapper] ==== wrapper stdout END ====
[2025-10-13 03:08:53] 2025-10-13 07:08:53,244 [wrapper] ==== wrapper stderr END ====
[2025-10-13 03:08:53]  *** Error codes and diagnostics ***
[2025-10-13 03:08:53]     "exeErrorCode": 0,
[2025-10-13 03:08:53]     "exeErrorDiag": "",
[2025-10-13 03:08:53]     "pilotErrorCode": 0,
[2025-10-13 03:08:53]     "pilotErrorDiag": "",
[2025-10-13 03:08:53]  *** Listing of results directory ***
[2025-10-13 03:08:53] total 408816
[2025-10-13 03:08:53] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 20:11 pilot3.tar.gz
[2025-10-13 03:08:53] -rwx------ 1 boincer umatlas     36292 Oct 12 20:33 runpilot2-wrapper.sh
[2025-10-13 03:08:53] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 20:33 queuedata.json
[2025-10-13 03:08:53] -rw-r--r-- 1 boincer umatlas       100 Oct 13 01:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 03:08:53] -rwxr-xr-x 1 boincer umatlas      7986 Oct 13 01:03 run_atlas
[2025-10-13 03:08:53] -rw-r--r-- 1 boincer umatlas       105 Oct 13 01:03 job.xml
[2025-10-13 03:08:53] -rw-r--r-- 2 boincer umatlas 218419622 Oct 13 01:03 EVNT.46676267._004694.pool.root.1
[2025-10-13 03:08:53] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 01:03 start_atlas.sh
[2025-10-13 03:08:53] drwxrwx--x 2 boincer umatlas      4096 Oct 13 01:03 shared
[2025-10-13 03:08:53] -rw-r--r-- 2 boincer umatlas    569680 Oct 13 01:03 input.tar.gz
[2025-10-13 03:08:53] -rw-r--r-- 1 boincer umatlas         0 Oct 13 01:03 boinc_lockfile
[2025-10-13 03:08:53] -rw-r--r-- 1 boincer umatlas      2550 Oct 13 01:03 pandaJob.out
[2025-10-13 03:08:53] -rw------- 1 boincer umatlas    974365 Oct 13 01:03 agis_schedconf.cvmfs.json
[2025-10-13 03:08:53] -rw------- 1 boincer umatlas   1560580 Oct 13 01:03 agis_ddmendpoints.agis.ALL.json
[2025-10-13 03:08:53] drwx------ 5 boincer umatlas      4096 Oct 13 01:03 pilot3
[2025-10-13 03:08:53] -rw-r--r-- 1 boincer umatlas      5910 Oct 13 03:04 init_data.xml
[2025-10-13 03:08:53] -rw------- 1 boincer umatlas 193437958 Oct 13 03:07 HITS.46676269._093197.pool.root.1
[2025-10-13 03:08:53] -rw-r--r-- 1 boincer umatlas       530 Oct 13 03:07 boinc_task_state.xml
[2025-10-13 03:08:53] -rw------- 1 boincer umatlas      1050 Oct 13 03:07 memory_monitor_summary.json
[2025-10-13 03:08:53] -rw------- 1 boincer umatlas    379613 Oct 13 03:07 log.46676269._093197.job.log.tgz.1
[2025-10-13 03:08:53] -rw------- 1 boincer umatlas      7843 Oct 13 03:08 heartbeat.json
[2025-10-13 03:08:53] -rw------- 1 boincer umatlas        95 Oct 13 03:08 pilot_heartbeat.json
[2025-10-13 03:08:53] -rw-r--r-- 1 boincer umatlas        27 Oct 13 03:08 wrapper_checkpoint.txt
[2025-10-13 03:08:53] -rw-r--r-- 1 boincer umatlas      8192 Oct 13 03:08 boinc_mmap_file
[2025-10-13 03:08:53] -rw------- 1 boincer umatlas      4818 Oct 13 03:08 pilotlog.txt
[2025-10-13 03:08:53] -rw------- 1 boincer umatlas   1054811 Oct 13 03:08 log.46676269._093197.job.log.1
[2025-10-13 03:08:53] -rw------- 1 boincer umatlas       357 Oct 13 03:08 output.list
[2025-10-13 03:08:53] -rw-r--r-- 1 boincer umatlas       620 Oct 13 03:08 runtime_log
[2025-10-13 03:08:53] -rw------- 1 boincer umatlas   1454080 Oct 13 03:08 result.tar.gz
[2025-10-13 03:08:53] -rw------- 1 boincer umatlas       659 Oct 13 03:08 YAUKDm0fLS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmfCmNDm1KfuDo.diag
[2025-10-13 03:08:53] -rw-r--r-- 1 boincer umatlas      8703 Oct 13 03:08 runtime_log.err
[2025-10-13 03:08:53] -rw-r--r-- 1 boincer umatlas     20853 Oct 13 03:08 stderr.txt
[2025-10-13 03:08:53] HITS file was successfully produced:
[2025-10-13 03:08:53] -rw------- 1 boincer umatlas 193437958 Oct 13 03:07 shared/HITS.pool.root.1
[2025-10-13 03:08:53]  *** Contents of shared directory: ***
[2025-10-13 03:08:53] total 404212
[2025-10-13 03:08:53] -rw-r--r-- 2 boincer umatlas 218419622 Oct 13 01:03 ATLAS.root_0
[2025-10-13 03:08:53] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 01:03 start_atlas.sh
[2025-10-13 03:08:53] -rw-r--r-- 2 boincer umatlas    569680 Oct 13 01:03 input.tar.gz
[2025-10-13 03:08:53] -rw------- 1 boincer umatlas 193437958 Oct 13 03:07 HITS.pool.root.1
[2025-10-13 03:08:53] -rw------- 1 boincer umatlas   1454080 Oct 13 03:08 result.tar.gz
03:08:55 (9665): run_atlas exited; CPU time 55689.289128
03:08:55 (9665): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN