Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-13 14:31:08 (10228): vboxwrapper version 26210
2025-10-13 14:31:08 (10228): BOINC client version: 8.0.2
2025-10-13 14:31:08 (10228): Detected: VirtualBox VboxManage Interface (Version: 7.0.12)
2025-10-13 14:31:09 (10228): Successfully copied 'init_data.xml' to the shared directory.
2025-10-13 14:31:09 (10228): Create VM. (boinc_9c2db77b5fae113e, slot#2)
2025-10-13 14:31:09 (10228): Setting Memory Size for VM. (5900MB)
2025-10-13 14:31:10 (10228): Setting CPU Count for VM. (4)
2025-10-13 14:31:10 (10228): Setting Chipset Options for VM.
2025-10-13 14:31:10 (10228): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-13 14:31:10 (10228): Setting Boot Options for VM.
2025-10-13 14:31:11 (10228): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-13 14:31:11 (10228): Enabling VM Network Access.
2025-10-13 14:31:11 (10228): Disabling USB Support for VM.
2025-10-13 14:31:12 (10228): Disabling COM Port Support for VM.
2025-10-13 14:31:12 (10228): Disabling LPT Port Support for VM.
2025-10-13 14:31:12 (10228): Disabling Audio Support for VM.
2025-10-13 14:31:12 (10228): Disabling Clipboard Support for VM.
2025-10-13 14:31:13 (10228): Disabling Drag and Drop Support for VM.
2025-10-13 14:31:13 (10228): Adding storage controller(s) to VM.
2025-10-13 14:31:13 (10228): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-13 14:31:14 (10228): Adding VirtualBox Guest Additions to VM.
2025-10-13 14:31:14 (10228): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-13 14:31:14 (10228): forwarding host port 53086 to guest port 80
2025-10-13 14:31:15 (10228): Enabling remote desktop for VM.
2025-10-13 14:31:15 (10228): Enabling shared directory for VM.
2025-10-13 14:31:16 (10228): Starting VM using VBoxManage interface. (boinc_9c2db77b5fae113e, slot#2)
2025-10-13 14:31:23 (10228): Successfully started VM. (PID = '1084')
2025-10-13 14:31:23 (10228): Reporting VM Process ID to BOINC.
2025-10-13 14:31:23 (10228): Guest Log: BIOS: VirtualBox 7.0.12
2025-10-13 14:31:23 (10228): Guest Log: CPUID EDX: 0x178bfbff
2025-10-13 14:31:23 (10228): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-10-13 14:31:23 (10228): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-13 14:31:23 (10228): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-13 14:31:23 (10228): Detected: Web Application Enabled (http://localhost:53086)
2025-10-13 14:31:23 (10228): Detected: Remote Desktop Enabled (localhost:53087)
2025-10-13 14:31:23 (10228): Preference change detected
2025-10-13 14:31:23 (10228): Setting CPU throttle for VM. (100%)
2025-10-13 14:31:23 (10228): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-13 14:31:25 (10228): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-13 14:31:25 (10228): Guest Log: BIOS: Booting from Hard Disk...
2025-10-13 14:31:28 (10228): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-13 14:31:28 (10228): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-13 14:31:28 (10228): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-13 14:31:28 (10228): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-13 14:31:28 (10228): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-13 14:31:28 (10228): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-13 14:31:28 (10228): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-13 14:31:28 (10228): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-13 14:31:28 (10228): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-13 14:31:28 (10228): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-13 14:31:28 (10228): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-13 14:31:28 (10228): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-13 14:31:28 (10228): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-13 14:31:28 (10228): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-13 14:31:28 (10228): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-13 14:31:28 (10228): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-13 14:31:28 (10228): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-13 14:31:28 (10228): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-13 14:31:28 (10228): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-13 14:31:28 (10228): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-13 14:31:28 (10228): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-13 14:31:28 (10228): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-13 14:31:28 (10228): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-13 14:31:28 (10228): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-13 14:31:28 (10228): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-13 14:31:28 (10228): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-13 14:31:28 (10228): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-13 14:31:28 (10228): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-13 14:31:28 (10228): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-13 14:31:28 (10228): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-13 14:31:28 (10228): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-13 14:31:28 (10228): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-13 14:31:36 (10228): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-13 14:31:36 (10228): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-10-13 14:31:47 (10228): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-13 14:31:47 (10228): Guest Log: 00:00:00.000220 main     Log opened 2025-10-13T14:31:44.777934000Z
2025-10-13 14:31:47 (10228): Guest Log: 00:00:00.000423 main     OS Product: Linux
2025-10-13 14:31:47 (10228): Guest Log: 00:00:00.000483 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-13 14:31:47 (10228): Guest Log: 00:00:00.000568 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-13 14:31:47 (10228): Guest Log: 00:00:00.000621 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-13 14:31:47 (10228): Guest Log: 00:00:00.000623 main     Process ID: 1353
2025-10-13 14:31:47 (10228): Guest Log: 00:00:00.000625 main     Package type: LINUX_64BITS_GENERIC
2025-10-13 14:31:47 (10228): Guest Log: 00:00:00.002082 main     5.2.32 r132073 started. Verbose level = 0
2025-10-13 14:31:47 (10228): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-13 14:31:47 (10228): Guest Log: [INFO] Mounting shared directory
2025-10-13 14:31:47 (10228): Guest Log: [INFO] Checking for init_data.xml
2025-10-13 14:31:54 (10228): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-13 14:31:54 (10228): Guest Log: [INFO] Detected branch: prod
2025-10-13 14:31:54 (10228): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-13 14:31:54 (10228): Guest Log: Copying input files
2025-10-13 14:31:56 (10228): Guest Log: Copied input files into RunAtlas.
2025-10-13 14:31:56 (10228): Guest Log: Detected user-configured HTTP proxy at http://192.168.0.39:3128 - will set in /etc/cvmfs/default.local
2025-10-13 14:31:57 (10228): Guest Log: 00:00:10.006220 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 000 703 000ns (GuestNow=1 760 358 716 781 594 000 ns GuestLast=1 760 365 904 782 297 000 ns fSetTimeLastLoop=true )
2025-10-13 14:32:04 (10228): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-13 14:32:05 (10228): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-13 14:32:05 (10228): Guest Log: 2.6.3.0 1631 0 29608 151661 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.0.39:3128 1
2025-10-13 14:32:06 (10228): Guest Log: copied the webapp to /var/www
2025-10-13 14:32:06 (10228): Guest Log: ATHENA_PROC_NUMBER=4
2025-10-13 14:32:06 (10228): Guest Log: ATHENA_CORE_NUMBER=4
2025-10-13 14:32:06 (10228): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-13 14:32:06 (10228): Guest Log:  *** Starting ATLAS job. (PandaID=6840834700 taskID=46676269) ***
2025-10-13 16:11:29 (10228): Status Report: Elapsed Time: '6000.000000'
2025-10-13 16:11:29 (10228): Status Report: CPU Time: '21415.234375'
2025-10-13 17:51:34 (10228): Status Report: Elapsed Time: '12000.000000'
2025-10-13 17:51:34 (10228): Status Report: CPU Time: '45138.625000'
2025-10-13 19:31:39 (10228): Status Report: Elapsed Time: '18000.000000'
2025-10-13 19:31:39 (10228): Status Report: CPU Time: '68836.062500'
2025-10-13 20:54:38 (10228): Guest Log:  *** Job finished ***
2025-10-13 20:54:38 (10228): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-13 20:54:38 (10228): Guest Log: 2025-10-13 18:53:43,625 | INFO     | job.realtimelogging is not enabled
2025-10-13 20:54:38 (10228): Guest Log: 2025-10-13 18:53:44,637 | INFO     | [payload] run_realtimelog thread has finished
2025-10-13 20:54:38 (10228): Guest Log: 2025-10-13 18:54:28,006 | INFO     | [monitor] cgroup control has ended
2025-10-13 20:54:38 (10228): Guest Log: 2025-10-13 18:54:28,372 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139854089930560)>', '<ExcThread(monitor, started 139853647828736)>']
2025-10-13 20:54:38 (10228): Guest Log: 2025-10-13 18:54:28,715 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-13 20:54:38 (10228): Guest Log: 2025-10-13 18:54:28,715 | INFO     | [monitor] control thread has ended
2025-10-13 20:54:38 (10228): Guest Log: 2025-10-13 18:54:33,379 | INFO     | all workflow threads have been joined
2025-10-13 20:54:38 (10228): Guest Log: 2025-10-13 18:54:33,379 | INFO     | end of generic workflow (traces error code: 0)
2025-10-13 20:54:38 (10228): Guest Log: 2025-10-13 18:54:33,379 | INFO     | traces error code: 0
2025-10-13 20:54:38 (10228): Guest Log: 2025-10-13 18:54:33,380 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-13 20:54:38 (10228): Guest Log: 2025-10-13 18:54:33,507 [wrapper] ==== pilot stdout END ====
2025-10-13 20:54:38 (10228): Guest Log: 2025-10-13 18:54:33,514 [wrapper] ==== wrapper stdout RESUME ====
2025-10-13 20:54:38 (10228): Guest Log: 2025-10-13 18:54:33,520 [wrapper] pilotpid: 6023
2025-10-13 20:54:38 (10228): Guest Log: 2025-10-13 18:54:33,527 [wrapper] Pilot exit status: 0
2025-10-13 20:54:38 (10228): Guest Log: 2025-10-13 18:54:33,618 [wrapper] pandaids: 6840834700
2025-10-13 20:54:38 (10228): Guest Log: 2025-10-13 18:54:33,673 [wrapper] cleanup supervisor_pilot 27363 6024
2025-10-13 20:54:39 (10228): Guest Log: 2025-10-13 18:54:33,687 [wrapper] Test setup, not cleaning
2025-10-13 20:54:39 (10228): Guest Log: 2025-10-13 18:54:33,693 [wrapper] apfmon messages muted
2025-10-13 20:54:39 (10228): Guest Log: 2025-10-13 18:54:33,700 [wrapper] ==== wrapper stdout END ====
2025-10-13 20:54:39 (10228): Guest Log: 2025-10-13 18:54:33,706 [wrapper] ==== wrapper stderr END ====
2025-10-13 20:54:39 (10228): Guest Log:  *** Error codes and diagnostics ***
2025-10-13 20:54:39 (10228): Guest Log:     "exeErrorCode": 0,
2025-10-13 20:54:39 (10228): Guest Log:     "exeErrorDiag": "",
2025-10-13 20:54:39 (10228): Guest Log:     "pilotErrorCode": 0,
2025-10-13 20:54:39 (10228): Guest Log:     "pilotErrorDiag": "",
2025-10-13 20:54:39 (10228): Guest Log:  *** Listing of results directory ***
2025-10-13 20:54:39 (10228): Guest Log: total 208012
2025-10-13 20:54:39 (10228): Guest Log: -rw-r--r--. 1 atlas atlas    557409 Oct 12 21:31 pilot3.tar.gz
2025-10-13 20:54:39 (10228): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct 12 21:45 queuedata.json
2025-10-13 20:54:39 (10228): Guest Log: -rwx------. 1 atlas atlas     36292 Oct 12 21:46 runpilot2-wrapper.sh
2025-10-13 20:54:39 (10228): Guest Log: -rwxr-xr-x. 1 atlas atlas      9236 Oct 13 12:31 init_data.xml
2025-10-13 20:54:39 (10228): Guest Log: -rwxr-xr-x. 1 atlas atlas    569679 Oct 13 12:31 input.tar.gz
2025-10-13 20:54:39 (10228): Guest Log: -rwxr-xr-x. 1 atlas atlas     15120 Oct 13 12:31 start_atlas.sh
2025-10-13 20:54:39 (10228): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct 13 12:31 EVNT.46676267._004840.pool.root.1 -> /data/./ATLAS.root_0
2025-10-13 20:54:39 (10228): Guest Log: -rw-r--r--. 1 atlas atlas      2550 Oct 13 12:32 pandaJob.out
2025-10-13 20:54:39 (10228): Guest Log: -rw-------. 1 atlas atlas    972497 Oct 13 12:32 agis_schedconf.cvmfs.json
2025-10-13 20:54:39 (10228): Guest Log: drwx------. 5 atlas atlas      4096 Oct 13 12:33 pilot3
2025-10-13 20:54:39 (10228): Guest Log: -rw-------. 1 atlas atlas 202142856 Oct 13 18:52 HITS.46676269._090293.pool.root.1
2025-10-13 20:54:39 (10228): Guest Log: -rw-------. 1 atlas atlas      1033 Oct 13 18:53 memory_monitor_summary.json
2025-10-13 20:54:39 (10228): Guest Log: -rw-------. 1 atlas atlas   1560580 Oct 13 18:53 agis_ddmendpoints.agis.ALL.json
2025-10-13 20:54:39 (10228): Guest Log: -rw-------. 1 atlas atlas    510651 Oct 13 18:53 log.46676269._090293.job.log.tgz.1
2025-10-13 20:54:39 (10228): Guest Log: -rw-------. 1 atlas atlas        95 Oct 13 18:53 pilot_heartbeat.json
2025-10-13 20:54:39 (10228): Guest Log: -rw-------. 1 atlas atlas      7827 Oct 13 18:53 heartbeat.json
2025-10-13 20:54:39 (10228): Guest Log: -rw-------. 1 atlas atlas      4870 Oct 13 18:54 pilotlog.txt
2025-10-13 20:54:39 (10228): Guest Log: -rw-------. 1 atlas atlas   3003972 Oct 13 18:54 log.46676269._090293.job.log.1
2025-10-13 20:54:39 (10228): Guest Log: -rw-------. 1 atlas atlas       357 Oct 13 18:54 output.list
2025-10-13 20:54:39 (10228): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct 13 18:54 runtime_log
2025-10-13 20:54:39 (10228): Guest Log: -rw-------. 1 atlas atlas   3532800 Oct 13 18:54 result.tar.gz
2025-10-13 20:54:39 (10228): Guest Log: -rw-r--r--. 1 atlas atlas      8652 Oct 13 18:54 runtime_log.err
2025-10-13 20:54:39 (10228): Guest Log: -rw-------. 1 atlas atlas       663 Oct 13 18:54 dXjNDmU4IS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm8jlNDmcFZLkm.diag
2025-10-13 20:54:39 (10228): Guest Log: Looking for outputfile HITS.46676269._090293.pool.root.1
2025-10-13 20:54:39 (10228): Guest Log: HITS file was successfully produced
2025-10-13 20:54:39 (10228): Guest Log: -rw-------. 1 atlas atlas 202142856 Oct 13 18:52 /home/atlas/RunAtlas/HITS.46676269._090293.pool.root.1
2025-10-13 20:54:40 (10228): Guest Log: Successfully finished the ATLAS job!
2025-10-13 20:54:40 (10228): Guest Log: Copying the results back to the shared directory!
2025-10-13 20:54:40 (10228): Guest Log:  *** Contents of shared directory: ***
2025-10-13 20:54:40 (10228): Guest Log: total 419699
2025-10-13 20:54:40 (10228): Guest Log: -rwxrwxrwx. 1 root root 223498836 Oct 13 12:31 ATLAS.root_0
2025-10-13 20:54:40 (10228): Guest Log: -rwxrwxrwx. 1 root root 202142856 Oct 13 18:54 HITS.pool.root.1
2025-10-13 20:54:40 (10228): Guest Log: -rwxrwxrwx. 1 root root      9236 Oct 13 12:31 init_data.xml
2025-10-13 20:54:40 (10228): Guest Log: -rwxrwxrwx. 1 root root    569679 Oct 13 05:02 input.tar.gz
2025-10-13 20:54:40 (10228): Guest Log: -rwxrwxrwx. 1 root root   3532800 Oct 13 18:54 result.tar.gz
2025-10-13 20:54:40 (10228): Guest Log: -rwxrwxrwx. 1 root root     15120 Oct 13 05:02 start_atlas.sh
2025-10-13 20:54:40 (10228): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-13 20:54:40 (10228): VM Completion File Detected.
2025-10-13 20:54:40 (10228): Powering off VM.
2025-10-13 20:54:41 (10228): Successfully stopped VM.
2025-10-13 20:54:41 (10228): Deregistering VM. (boinc_9c2db77b5fae113e, slot#2)
2025-10-13 20:54:41 (10228): Removing network bandwidth throttle group from VM.
2025-10-13 20:54:41 (10228): Removing VM from VirtualBox.
2025-10-13 20:54:47 (10228): called boinc_finish(0)

</stderr_txt>
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