Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
15:11:13 (2089238): wrapper (7.7.26015): starting
15:11:13 (2089238): wrapper: running run_atlas (--nthreads 2)
[2025-10-13 15:11:13] Arguments: --nthreads 2
[2025-10-13 15:11:13] Threads: 2
[2025-10-13 15:11:13] Checking for CVMFS
[2025-10-13 15:11:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 15:11:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 15:11:14] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 15:11:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 15:11:14] 2.9.2.0 1850551 1098 54332 151661 0 57 34124393 36864000 0 130560 0 614436 99.988 35926 561 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 15:11:14] CVMFS is ok
[2025-10-13 15:11:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 15:11:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 15:11:14] Further information can be found at the LHC@home message board.
[2025-10-13 15:11:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 15:11:14] Checking for apptainer binary...
[2025-10-13 15:11:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 15:11:14] Running /usr/bin/apptainer --version
[2025-10-13 15:11:14] apptainer version 1.4.1-1.1
[2025-10-13 15:11:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 15:11:14] thA315
[2025-10-13 15:11:14] apptainer works
[2025-10-13 15:11:14] Set ATHENA_PROC_NUMBER=2
[2025-10-13 15:11:14] Set ATHENA_CORE_NUMBER=2
[2025-10-13 15:11:14] Starting ATLAS job with PandaID=6840181602
[2025-10-13 15:11:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 17:17:46]  *** The last 200 lines of the pilot log: ***
[2025-10-13 17:17:46] 2025-10-13 15:16:49,597 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 17:17:46] 2025-10-13 15:16:49,597 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 17:17:46] 2025-10-13 15:16:49,597 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 17:17:46] 2025-10-13 15:16:49,598 | INFO     | will abort loop
[2025-10-13 17:17:46] 2025-10-13 15:16:49,839 | INFO     | all job control threads have been joined
[2025-10-13 17:17:46] 2025-10-13 15:16:50,096 | INFO     | all data control threads have been joined
[2025-10-13 17:17:46] 2025-10-13 15:16:50,491 | INFO     | [job] retrieve thread has finished
[2025-10-13 17:17:46] 2025-10-13 15:16:50,492 | INFO     | [job] queue monitor thread has finished
[2025-10-13 17:17:46] 2025-10-13 15:16:50,551 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 17:17:46] 2025-10-13 15:16:50,559 | INFO     | all payload control threads have been joined
[2025-10-13 17:17:46] 2025-10-13 15:16:50,604 | INFO     | [job] job monitor thread has finished
[2025-10-13 17:17:46] 2025-10-13 15:16:50,846 | INFO     | [job] control thread has finished
[2025-10-13 17:17:46] 2025-10-13 15:16:50,960 | INFO     | [payload] validate_post thread has finished
[2025-10-13 17:17:46] 2025-10-13 15:16:51,102 | INFO     | [data] control thread has finished
[2025-10-13 17:17:46] 2025-10-13 15:16:51,492 | INFO     | [data] copytool_out thread has finished
[2025-10-13 17:17:46] 2025-10-13 15:16:51,493 | INFO     | [payload] failed_post thread has finished
[2025-10-13 17:17:46] 2025-10-13 15:16:51,565 | INFO     | [payload] control thread has finished
[2025-10-13 17:17:46] 2025-10-13 15:16:51,629 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 17:17:46] 2025-10-13 15:16:51,695 | INFO     | [data] copytool_in thread has finished
[2025-10-13 17:17:46] 2025-10-13 15:16:51,744 | INFO     | [job] validate thread has finished
[2025-10-13 17:17:46] 2025-10-13 15:16:51,868 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 17:17:46] 2025-10-13 15:16:53,493 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 17:17:46] 2025-10-13 15:17:00,479 | INFO     | job.realtimelogging is not enabled
[2025-10-13 17:17:46] 2025-10-13 15:17:01,485 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 17:17:46] 2025-10-13 15:17:39,332 | INFO     | [monitor] cgroup control has ended
[2025-10-13 17:17:46] 2025-10-13 15:17:41,311 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140627833075520)>', '<ExcThread(monitor, started 140627186525952)>']
[2025-10-13 17:17:46] 2025-10-13 15:17:41,752 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 17:17:46] 2025-10-13 15:17:41,752 | INFO     | [monitor] control thread has ended
[2025-10-13 17:17:46] 2025-10-13 15:17:46,326 | INFO     | all workflow threads have been joined
[2025-10-13 17:17:46] 2025-10-13 15:17:46,327 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 17:17:46] 2025-10-13 15:17:46,327 | INFO     | traces error code: 0
[2025-10-13 17:17:46] 2025-10-13 15:17:46,328 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 17:17:46] 2025-10-13 15:17:46,372 [wrapper] ==== pilot stdout END ====
[2025-10-13 17:17:46] 2025-10-13 15:17:46,375 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 17:17:46] 2025-10-13 15:17:46,377 [wrapper] pilotpid: 2092943
[2025-10-13 17:17:46] 2025-10-13 15:17:46,379 [wrapper] Pilot exit status: 0
[2025-10-13 17:17:46] 2025-10-13 15:17:46,385 [wrapper] pandaids: 6840181602
[2025-10-13 17:17:46] 2025-10-13 15:17:46,399 [wrapper] cleanup supervisor_pilot 2114206 2092944
[2025-10-13 17:17:46] 2025-10-13 15:17:46,401 [wrapper] Test setup, not cleaning
[2025-10-13 17:17:46] 2025-10-13 15:17:46,403 [wrapper] apfmon messages muted
[2025-10-13 17:17:46] 2025-10-13 15:17:46,405 [wrapper] ==== wrapper stdout END ====
[2025-10-13 17:17:46] 2025-10-13 15:17:46,407 [wrapper] ==== wrapper stderr END ====
[2025-10-13 17:17:46]  *** Error codes and diagnostics ***
[2025-10-13 17:17:46]     "exeErrorCode": 0,
[2025-10-13 17:17:46]     "exeErrorDiag": "",
[2025-10-13 17:17:46]     "pilotErrorCode": 0,
[2025-10-13 17:17:46]     "pilotErrorDiag": "",
[2025-10-13 17:17:46]  *** Listing of results directory ***
[2025-10-13 17:17:46] total 408472
[2025-10-13 17:17:46] -rw-r--r-- 1 boinc boinc    557409 Oct 12 15:55 pilot3.tar.gz
[2025-10-13 17:17:46] -rw-r--r-- 1 boinc boinc      5112 Oct 12 16:16 queuedata.json
[2025-10-13 17:17:46] -rwx------ 1 boinc boinc     36292 Oct 12 16:16 runpilot2-wrapper.sh
[2025-10-13 17:17:46] -rw-r--r-- 1 boinc boinc       100 Oct 13 15:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 17:17:46] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 15:11 run_atlas
[2025-10-13 17:17:46] -rw-r--r-- 1 boinc boinc       105 Oct 13 15:11 job.xml
[2025-10-13 17:17:46] -rw-r--r-- 2 boinc boinc 220064108 Oct 13 15:11 EVNT.46676267._004223.pool.root.1
[2025-10-13 17:17:46] -rw-r--r-- 2 boinc boinc    569680 Oct 13 15:11 input.tar.gz
[2025-10-13 17:17:46] -rw-r--r-- 2 boinc boinc     15120 Oct 13 15:11 start_atlas.sh
[2025-10-13 17:17:46] drwxrwx--x 2 boinc boinc      4096 Oct 13 15:11 shared
[2025-10-13 17:17:46] -rw-r--r-- 1 boinc boinc         0 Oct 13 15:11 boinc_setup_complete
[2025-10-13 17:17:46] -rw-r--r-- 1 boinc boinc      6205 Oct 13 15:11 init_data.xml
[2025-10-13 17:17:46] -rw-r--r-- 1 boinc boinc         0 Oct 13 15:11 boinc_lockfile
[2025-10-13 17:17:46] -rw-r--r-- 1 boinc boinc      2550 Oct 13 15:11 pandaJob.out
[2025-10-13 17:17:46] -rw------- 1 boinc boinc    972497 Oct 13 15:11 agis_schedconf.cvmfs.json
[2025-10-13 17:17:46] -rw------- 1 boinc boinc   1560580 Oct 13 15:11 agis_ddmendpoints.agis.ALL.json
[2025-10-13 17:17:46] drwx------ 5 boinc boinc      4096 Oct 13 15:11 pilot3
[2025-10-13 17:17:46] -rw------- 1 boinc boinc        95 Oct 13 17:16 pilot_heartbeat.json
[2025-10-13 17:17:46] -rw------- 1 boinc boinc 191596843 Oct 13 17:16 HITS.46676269._080477.pool.root.1
[2025-10-13 17:17:46] -rw-r--r-- 1 boinc boinc       529 Oct 13 17:16 boinc_task_state.xml
[2025-10-13 17:17:46] -rw------- 1 boinc boinc      1016 Oct 13 17:16 memory_monitor_summary.json
[2025-10-13 17:17:46] -rw------- 1 boinc boinc    279894 Oct 13 17:16 log.46676269._080477.job.log.tgz.1
[2025-10-13 17:17:46] -rw------- 1 boinc boinc      7747 Oct 13 17:16 heartbeat.json
[2025-10-13 17:17:46] -rw-r--r-- 1 boinc boinc      8192 Oct 13 17:17 boinc_mmap_file
[2025-10-13 17:17:46] -rw-r--r-- 1 boinc boinc        27 Oct 13 17:17 wrapper_checkpoint.txt
[2025-10-13 17:17:46] -rw------- 1 boinc boinc      4814 Oct 13 17:17 pilotlog.txt
[2025-10-13 17:17:46] -rw------- 1 boinc boinc   1084733 Oct 13 17:17 log.46676269._080477.job.log.1
[2025-10-13 17:17:46] -rw------- 1 boinc boinc       357 Oct 13 17:17 output.list
[2025-10-13 17:17:46] -rw-r--r-- 1 boinc boinc       620 Oct 13 17:17 runtime_log
[2025-10-13 17:17:46] -rw------- 1 boinc boinc   1382400 Oct 13 17:17 result.tar.gz
[2025-10-13 17:17:46] -rw-r--r-- 1 boinc boinc      8777 Oct 13 17:17 runtime_log.err
[2025-10-13 17:17:46] -rw------- 1 boinc boinc       660 Oct 13 17:17 FnZKDml3BS8n9Rq4apOajLDm4fhM0noT9bVof3QYDm93TMDmHzDCxn.diag
[2025-10-13 17:17:46] -rw-r--r-- 1 boinc boinc      6570 Oct 13 17:17 stderr.txt
[2025-10-13 17:17:46] HITS file was successfully produced:
[2025-10-13 17:17:46] -rw------- 1 boinc boinc 191596843 Oct 13 17:16 shared/HITS.pool.root.1
[2025-10-13 17:17:46]  *** Contents of shared directory: ***
[2025-10-13 17:17:46] total 403952
[2025-10-13 17:17:46] -rw-r--r-- 2 boinc boinc 220064108 Oct 13 15:11 ATLAS.root_0
[2025-10-13 17:17:46] -rw-r--r-- 2 boinc boinc    569680 Oct 13 15:11 input.tar.gz
[2025-10-13 17:17:46] -rw-r--r-- 2 boinc boinc     15120 Oct 13 15:11 start_atlas.sh
[2025-10-13 17:17:46] -rw------- 1 boinc boinc 191596843 Oct 13 17:16 HITS.pool.root.1
[2025-10-13 17:17:46] -rw------- 1 boinc boinc   1382400 Oct 13 17:17 result.tar.gz
17:17:47 (2089238): run_atlas exited; CPU time 14655.297064
17:17:47 (2089238): called boinc_finish(0)

</stderr_txt>
]]>

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