Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
01:06:26 (17780): wrapper (7.7.26015): starting
01:06:26 (17780): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 01:06:26] Arguments: --nthreads 8
[2025-10-13 01:06:26] Threads: 8
[2025-10-13 01:06:26] Checking for CVMFS
[2025-10-13 01:06:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 01:06:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 01:06:26] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 01:06:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 01:06:26] 2.11.2.0 28705 54041 123108 151649 2 188 16739277 18432001 1833 130560 0 49616289 99.976 2421685 37262 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 01:06:26] CVMFS is ok
[2025-10-13 01:06:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 01:06:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 01:06:26] Further information can be found at the LHC@home message board.
[2025-10-13 01:06:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 01:06:26] Checking for apptainer binary...
[2025-10-13 01:06:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 01:06:26] Running /usr/bin/apptainer --version
[2025-10-13 01:06:26] apptainer version 1.3.2-1.el7
[2025-10-13 01:06:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 01:06:27] c-206-27.aglt2.org
[2025-10-13 01:06:27] apptainer works
[2025-10-13 01:06:27] Set ATHENA_PROC_NUMBER=8
[2025-10-13 01:06:27] Set ATHENA_CORE_NUMBER=8
[2025-10-13 01:06:27] Starting ATLAS job with PandaID=6841068748
[2025-10-13 01:06:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 04:13:01]  *** The last 200 lines of the pilot log: ***
[2025-10-13 04:13:01] 2025-10-13 08:11:53,837 | INFO     | intersect: -42494872633.17802
[2025-10-13 04:13:01] 2025-10-13 08:11:53,837 | INFO     | chi2: 1.4484540754486446
[2025-10-13 04:13:01] 2025-10-13 08:11:53,837 | INFO     | current chi2=1.4484540754486446 (change=0.032937576497732594 %)
[2025-10-13 04:13:01] 2025-10-13 08:11:53,837 | INFO     | right removable region: 176
[2025-10-13 04:13:01] 2025-10-13 08:11:53,837 | INFO     | sum of square deviations: 1719429448.0
[2025-10-13 04:13:01] 2025-10-13 08:11:53,838 | INFO     | sum of deviations: 14347744181.0
[2025-10-13 04:13:01] 2025-10-13 08:11:53,838 | INFO     | mean x: 1760337697.0
[2025-10-13 04:13:01] 2025-10-13 08:11:53,838 | INFO     | mean y: 2481623.7627118644
[2025-10-13 04:13:01] 2025-10-13 08:11:53,839 | INFO     | -- intersect: -14686620611.926514
[2025-10-13 04:13:01] 2025-10-13 08:11:53,839 | INFO     | intersect: -14686620611.926514
[2025-10-13 04:13:01] 2025-10-13 08:11:53,839 | INFO     | chi2: 0.04089694917706056
[2025-10-13 04:13:01] 2025-10-13 08:11:53,839 | INFO     | current chi2=0.04089694917706056 (change=97.17744045833992 %)
[2025-10-13 04:13:01] 2025-10-13 08:11:53,839 | INFO     | sum of square deviations: 1577789583.0
[2025-10-13 04:13:01] 2025-10-13 08:11:53,840 | INFO     | sum of deviations: 8454158603.999999
[2025-10-13 04:13:01] 2025-10-13 08:11:53,840 | INFO     | mean x: 1760337849.5
[2025-10-13 04:13:01] 2025-10-13 08:11:53,840 | INFO     | mean y: 2487935.093023256
[2025-10-13 04:13:01] 2025-10-13 08:11:53,840 | INFO     | -- intersect: -9429806165.873468
[2025-10-13 04:13:01] 2025-10-13 08:11:53,841 | INFO     | intersect: -9429806165.873468
[2025-10-13 04:13:01] 2025-10-13 08:11:53,841 | INFO     | chi2: 0.0030297544014947714
[2025-10-13 04:13:01] 2025-10-13 08:11:53,841 | INFO     | current chi2=0.0030297544014947714 (change=92.59173492776281 %)
[2025-10-13 04:13:01] 2025-10-13 08:11:53,841 | INFO     | sum of square deviations: 1444149868.0
[2025-10-13 04:13:01] 2025-10-13 08:11:53,842 | INFO     | sum of deviations: 7046974004.0
[2025-10-13 04:13:01] 2025-10-13 08:11:53,842 | INFO     | mean x: 1760338002.0
[2025-10-13 04:13:01] 2025-10-13 08:11:53,842 | INFO     | mean y: 2489549.389221557
[2025-10-13 04:13:01] 2025-10-13 08:11:53,842 | INFO     | -- intersect: -8587378035.148272
[2025-10-13 04:13:01] 2025-10-13 08:11:53,842 | INFO     | intersect: -8587378035.148272
[2025-10-13 04:13:01] 2025-10-13 08:11:53,843 | INFO     | chi2: 0.0015861199479002169
[2025-10-13 04:13:01] 2025-10-13 08:11:53,843 | INFO     | current chi2=0.0015861199479002169 (change=47.648563622263154 %)
[2025-10-13 04:13:01] 2025-10-13 08:11:53,843 | INFO     | sum of square deviations: 1318277740.5
[2025-10-13 04:13:01] 2025-10-13 08:11:53,844 | INFO     | sum of deviations: 5761547234.000001
[2025-10-13 04:13:01] 2025-10-13 08:11:53,844 | INFO     | mean x: 1760338154.5
[2025-10-13 04:13:01] 2025-10-13 08:11:53,844 | INFO     | mean y: 2491103.75308642
[2025-10-13 04:13:01] 2025-10-13 08:11:53,844 | INFO     | -- intersect: -7691085988.064722
[2025-10-13 04:13:01] 2025-10-13 08:11:53,844 | INFO     | intersect: -7691085988.064722
[2025-10-13 04:13:01] 2025-10-13 08:11:53,845 | INFO     | chi2: 0.0009131319758113668
[2025-10-13 04:13:01] 2025-10-13 08:11:53,845 | INFO     | current chi2=0.0009131319758113668 (change=42.42982839852588 %)
[2025-10-13 04:13:01] 2025-10-13 08:11:53,845 | INFO     | sum of square deviations: 1199940638.0
[2025-10-13 04:13:01] 2025-10-13 08:11:53,847 | INFO     | sum of deviations: 4935661280.000002
[2025-10-13 04:13:01] 2025-10-13 08:11:53,847 | INFO     | mean x: 1760338307.0
[2025-10-13 04:13:01] 2025-10-13 08:11:53,847 | INFO     | mean y: 2492166.821656051
[2025-10-13 04:13:01] 2025-10-13 08:11:53,847 | INFO     | -- intersect: -7238227370.806551
[2025-10-13 04:13:01] 2025-10-13 08:11:53,847 | INFO     | intersect: -7238227370.806551
[2025-10-13 04:13:01] 2025-10-13 08:11:53,848 | INFO     | chi2: 0.0007632032829219133
[2025-10-13 04:13:01] 2025-10-13 08:11:53,848 | INFO     | current chi2=0.0007632032829219133 (change=16.4191701595198 %)
[2025-10-13 04:13:01] 2025-10-13 08:11:53,848 | INFO     | left removable region: 50
[2025-10-13 04:13:01] 2025-10-13 08:11:53,849 | INFO     | sum of square deviations: 620244187.5
[2025-10-13 04:13:01] 2025-10-13 08:11:53,850 | INFO     | sum of deviations: 2055944732.0
[2025-10-13 04:13:01] 2025-10-13 08:11:53,850 | INFO     | mean x: 1760338886.5
[2025-10-13 04:13:01] 2025-10-13 08:11:53,850 | INFO     | mean y: 2495844.73015873
[2025-10-13 04:13:01] 2025-10-13 08:11:53,850 | INFO     | -- intersect: -5832559981.946848
[2025-10-13 04:13:01] 2025-10-13 08:11:53,850 | INFO     | intersect: -5832559981.946848
[2025-10-13 04:13:01] 2025-10-13 08:11:53,851 | INFO     | chi2: 0.0002910173226514955
[2025-10-13 04:13:01] 2025-10-13 08:11:53,851 | INFO     | -- intersect: -5832559981.946848
[2025-10-13 04:13:01] 2025-10-13 08:11:53,851 | INFO     | current memory leak: 3.31 B/s (using 126 data points, chi2=0.00)
[2025-10-13 04:13:01] 2025-10-13 08:11:53,852 | INFO     | could have reported an average CPU frequency of 2541 MHz (10 samples)
[2025-10-13 04:13:01] 2025-10-13 08:11:53,852 | INFO     | ..............................
[2025-10-13 04:13:01] 2025-10-13 08:11:53,852 | INFO     | . Timing measurements:
[2025-10-13 04:13:01] 2025-10-13 08:11:53,852 | INFO     | . get job = 0 s
[2025-10-13 04:13:01] 2025-10-13 08:11:53,852 | INFO     | . initial setup = 2 s
[2025-10-13 04:13:01] 2025-10-13 08:11:53,852 | INFO     | . payload setup = 5 s
[2025-10-13 04:13:01] 2025-10-13 08:11:53,853 | INFO     | . stage-in = 0 s
[2025-10-13 04:13:01] 2025-10-13 08:11:53,853 | INFO     | . payload execution = 11081 s
[2025-10-13 04:13:01] 2025-10-13 08:11:53,853 | INFO     | . stage-out = 2 s
[2025-10-13 04:13:01] 2025-10-13 08:11:53,853 | INFO     | . log creation = 0 s
[2025-10-13 04:13:01] 2025-10-13 08:11:53,853 | INFO     | ..............................
[2025-10-13 04:13:01] 2025-10-13 08:11:54,430 | INFO     | 
[2025-10-13 04:13:01] 2025-10-13 08:11:54,430 | INFO     | job summary report
[2025-10-13 04:13:01] 2025-10-13 08:11:54,430 | INFO     | --------------------------------------------------
[2025-10-13 04:13:01] 2025-10-13 08:11:54,430 | INFO     | PanDA job id: 6841068748
[2025-10-13 04:13:01] 2025-10-13 08:11:54,430 | INFO     | task id: 46676269
[2025-10-13 04:13:01] 2025-10-13 08:11:54,431 | INFO     | errors: (none)
[2025-10-13 04:13:01] 2025-10-13 08:11:54,431 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 04:13:01] 2025-10-13 08:11:54,431 | INFO     | pilot state: finished 
[2025-10-13 04:13:01] 2025-10-13 08:11:54,431 | INFO     | transexitcode: 0
[2025-10-13 04:13:01] 2025-10-13 08:11:54,431 | INFO     | exeerrorcode: 0
[2025-10-13 04:13:01] 2025-10-13 08:11:54,431 | INFO     | exeerrordiag: 
[2025-10-13 04:13:01] 2025-10-13 08:11:54,432 | INFO     | exitcode: 0
[2025-10-13 04:13:01] 2025-10-13 08:11:54,432 | INFO     | exitmsg: OK
[2025-10-13 04:13:01] 2025-10-13 08:11:54,432 | INFO     | cpuconsumptiontime: 81743 s
[2025-10-13 04:13:01] 2025-10-13 08:11:54,432 | INFO     | nevents: 400
[2025-10-13 04:13:01] 2025-10-13 08:11:54,432 | INFO     | neventsw: 0
[2025-10-13 04:13:01] 2025-10-13 08:11:54,432 | INFO     | pid: 27917
[2025-10-13 04:13:01] 2025-10-13 08:11:54,433 | INFO     | pgrp: 27917
[2025-10-13 04:13:01] 2025-10-13 08:11:54,433 | INFO     | corecount: 8
[2025-10-13 04:13:01] 2025-10-13 08:11:54,433 | INFO     | event service: False
[2025-10-13 04:13:01] 2025-10-13 08:11:54,433 | INFO     | sizes: {0: 2348857, 1: 2348857, 4: 2349147, 12: 2349175, 11090: 2378305, 11094: 2387487, 11100: 2387625}
[2025-10-13 04:13:01] 2025-10-13 08:11:54,433 | INFO     | --------------------------------------------------
[2025-10-13 04:13:01] 2025-10-13 08:11:54,433 | INFO     | 
[2025-10-13 04:13:01] 2025-10-13 08:11:54,434 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-13 04:13:01] 2025-10-13 08:11:54,457 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 04:13:01] 2025-10-13 08:11:54,458 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 04:13:01] 2025-10-13 08:11:54,458 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 04:13:01] 2025-10-13 08:11:54,458 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 04:13:01] 2025-10-13 08:11:54,458 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 04:13:01] 2025-10-13 08:11:54,458 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 04:13:01] 2025-10-13 08:11:54,459 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 04:13:01] 2025-10-13 08:11:54,459 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 04:13:01] 2025-10-13 08:11:54,459 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 04:13:01] 2025-10-13 08:11:54,459 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 04:13:01] 2025-10-13 08:11:54,459 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 04:13:01] 2025-10-13 08:11:54,460 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 04:13:01] 2025-10-13 08:11:54,460 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 04:13:01] 2025-10-13 08:11:54,460 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 04:13:01] 2025-10-13 08:11:54,460 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 04:13:01] 2025-10-13 08:11:54,460 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 04:13:01] 2025-10-13 08:11:54,460 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 04:13:01] 2025-10-13 08:11:54,461 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 04:13:01] 2025-10-13 08:11:54,461 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 04:13:01] 2025-10-13 08:11:54,461 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 04:13:01] 2025-10-13 08:11:54,461 | INFO     | job 6841068748 has completed (purged errors)
[2025-10-13 04:13:01] 2025-10-13 08:11:54,461 | INFO     | overall cleanup function is called
[2025-10-13 04:13:01] 2025-10-13 08:11:55,469 | INFO     | --- collectZombieJob: --- 10, [27917]
[2025-10-13 04:13:01] 2025-10-13 08:11:55,469 | INFO     | zombie collector waiting for pid 27917
[2025-10-13 04:13:01] 2025-10-13 08:11:55,470 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 04:13:01] 2025-10-13 08:11:55,470 | INFO     | collected zombie processes
[2025-10-13 04:13:01] 2025-10-13 08:11:55,470 | INFO     | will attempt to kill all subprocesses of pid=27917
[2025-10-13 04:13:01] 2025-10-13 08:11:55,617 | INFO     | process IDs to be killed: [27917] (in reverse order)
[2025-10-13 04:13:01] 2025-10-13 08:11:55,683 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 04:13:01] 2025-10-13 08:11:55,683 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 04:13:01] 2025-10-13 08:11:55,688 | INFO     | did not find any defunct processes belonging to 27917
[2025-10-13 04:13:01] 2025-10-13 08:11:55,693 | INFO     | did not find any defunct processes belonging to 27917
[2025-10-13 04:13:01] 2025-10-13 08:11:55,693 | INFO     | ready for new job
[2025-10-13 04:13:01] 2025-10-13 08:11:55,694 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 04:13:01] 2025-10-13 08:11:55,696 | INFO     | ***************************************
[2025-10-13 04:13:01] 2025-10-13 08:11:55,696 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 04:13:01] 2025-10-13 08:11:55,696 | INFO     | ***************************************
[2025-10-13 04:13:01] 2025-10-13 08:11:55,696 | INFO     | 
[2025-10-13 04:13:01] 2025-10-13 08:11:55,697 | INFO     | architecture information:
[2025-10-13 04:13:01] 2025-10-13 08:11:55,697 | INFO     | executing command: cat /etc/os-release
[2025-10-13 04:13:01] 2025-10-13 08:11:55,711 | INFO     | cat /etc/os-release:
[2025-10-13 04:13:01] NAME="CentOS Linux"
[2025-10-13 04:13:01] VERSION="7 (Core)"
[2025-10-13 04:13:01] ID="centos"
[2025-10-13 04:13:01] ID_LIKE="rhel fedora"
[2025-10-13 04:13:01] VERSION_ID="7"
[2025-10-13 04:13:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 04:13:01] ANSI_COLOR="0;31"
[2025-10-13 04:13:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 04:13:01] HOME_URL="https://www.centos.org/"
[2025-10-13 04:13:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 04:13:01] 
[2025-10-13 04:13:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 04:13:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 04:13:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 04:13:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 04:13:01] 
[2025-10-13 04:13:01] 2025-10-13 08:11:55,712 | INFO     | ***************************************
[2025-10-13 04:13:01] 2025-10-13 08:11:56,215 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-13 04:13:01] 2025-10-13 08:11:56,230 | INFO     | sufficient remaining disk space (28530704384 B)
[2025-10-13 04:13:01] 2025-10-13 08:11:56,230 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 04:13:01] 2025-10-13 08:11:56,230 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 04:13:01] 2025-10-13 08:11:56,231 | INFO     | update_server=False
[2025-10-13 04:13:01] 2025-10-13 08:11:56,231 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 04:13:01] 2025-10-13 08:11:56,231 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 04:13:01] 2025-10-13 08:11:56,231 | INFO     | aborting loop
[2025-10-13 04:13:01] 2025-10-13 08:11:56,232 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 04:13:01] 2025-10-13 08:11:56,383 | INFO     | all payload control threads have been joined
[2025-10-13 04:13:01] 2025-10-13 08:11:56,457 | INFO     | all job control threads have been joined
[2025-10-13 04:13:01] 2025-10-13 08:11:56,555 | INFO     | all data control threads have been joined
[2025-10-13 04:13:01] 2025-10-13 08:11:57,232 | INFO     | [job] retrieve thread has finished
[2025-10-13 04:13:01] 2025-10-13 08:11:57,233 | INFO     | [job] job monitor thread has finished
[2025-10-13 04:13:01] 2025-10-13 08:11:57,312 | INFO     | [payload] failed_post thread has finished
[2025-10-13 04:13:01] 2025-10-13 08:11:57,389 | INFO     | [payload] control thread has finished
[2025-10-13 04:13:01] 2025-10-13 08:11:57,460 | INFO     | [job] control thread has finished
[2025-10-13 04:13:01] 2025-10-13 08:11:57,561 | INFO     | [data] control thread has finished
[2025-10-13 04:13:01] 2025-10-13 08:11:57,615 | INFO     | [job] validate thread has finished
[2025-10-13 04:13:01] 2025-10-13 08:11:57,620 | INFO     | [data] copytool_in thread has finished
[2025-10-13 04:13:01] 2025-10-13 08:11:57,696 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 04:13:01] 2025-10-13 08:11:57,931 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 04:13:01] 2025-10-13 08:11:58,067 | INFO     | [payload] validate_post thread has finished
[2025-10-13 04:13:01] 2025-10-13 08:11:58,238 | INFO     | [data] copytool_out thread has finished
[2025-10-13 04:13:01] 2025-10-13 08:11:58,581 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 04:13:01] 2025-10-13 08:11:58,588 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 04:13:01] 2025-10-13 08:11:58,613 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 04:13:01] 2025-10-13 08:11:58,963 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 04:13:01] 2025-10-13 08:11:59,969 | INFO     | [job] queue monitor thread has finished
[2025-10-13 04:13:01] 2025-10-13 08:12:02,588 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 04:13:01] 2025-10-13 08:12:26,771 | INFO     | PID=21488 has CPU usage=4.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-13 04:13:01] 2025-10-13 08:12:26,772 | INFO     | .. there are 3 such processes running
[2025-10-13 04:13:01] 2025-10-13 08:12:26,772 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 04:13:01] 2025-10-13 08:12:26,773 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 04:13:01] 2025-10-13 08:12:26,773 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 04:13:01] 2025-10-13 08:12:56,181 | INFO     | [monitor] cgroup control has ended
[2025-10-13 04:13:01] 2025-10-13 08:12:56,322 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140400046831424)>', '<ExcThread(monitor, started 140399754585856)>']
[2025-10-13 04:13:01] 2025-10-13 08:12:56,932 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 04:13:01] 2025-10-13 08:12:56,932 | INFO     | [monitor] control thread has ended
[2025-10-13 04:13:01] 2025-10-13 08:13:01,347 | INFO     | all workflow threads have been joined
[2025-10-13 04:13:01] 2025-10-13 08:13:01,364 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 04:13:01] 2025-10-13 08:13:01,365 | INFO     | traces error code: 0
[2025-10-13 04:13:01] 2025-10-13 08:13:01,365 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 04:13:01] 2025-10-13 08:13:01,481 [wrapper] ==== pilot stdout END ====
[2025-10-13 04:13:01] 2025-10-13 08:13:01,483 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 04:13:01] 2025-10-13 08:13:01,485 [wrapper] pilotpid: 21488
[2025-10-13 04:13:01] 2025-10-13 08:13:01,487 [wrapper] Pilot exit status: 0
[2025-10-13 04:13:01] 2025-10-13 08:13:01,499 [wrapper] pandaids: 6841068748
[2025-10-13 04:13:01] 2025-10-13 08:13:01,530 [wrapper] cleanup supervisor_pilot   738 21489
[2025-10-13 04:13:01] 2025-10-13 08:13:01,533 [wrapper] Test setup, not cleaning
[2025-10-13 04:13:01] 2025-10-13 08:13:01,542 [wrapper] apfmon messages muted
[2025-10-13 04:13:01] 2025-10-13 08:13:01,546 [wrapper] ==== wrapper stdout END ====
[2025-10-13 04:13:01] 2025-10-13 08:13:01,548 [wrapper] ==== wrapper stderr END ====
[2025-10-13 04:13:01]  *** Error codes and diagnostics ***
[2025-10-13 04:13:01]     "exeErrorCode": 0,
[2025-10-13 04:13:01]     "exeErrorDiag": "",
[2025-10-13 04:13:01]     "pilotErrorCode": 0,
[2025-10-13 04:13:01]     "pilotErrorDiag": "",
[2025-10-13 04:13:01]  *** Listing of results directory ***
[2025-10-13 04:13:01] total 416244
[2025-10-13 04:13:01] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 20:11 pilot3.tar.gz
[2025-10-13 04:13:01] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 20:15 queuedata.json
[2025-10-13 04:13:01] -rwx------ 1 boincer umatlas     36292 Oct 12 20:16 runpilot2-wrapper.sh
[2025-10-13 04:13:01] -rw-r--r-- 1 boincer umatlas       100 Oct 13 01:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 04:13:01] -rwxr-xr-x 1 boincer umatlas      7986 Oct 13 01:06 run_atlas
[2025-10-13 04:13:01] -rw-r--r-- 1 boincer umatlas       105 Oct 13 01:06 job.xml
[2025-10-13 04:13:01] -rw-r--r-- 2 boincer umatlas 221840282 Oct 13 01:06 EVNT.46676267._004686.pool.root.1
[2025-10-13 04:13:01] drwxrwx--x 2 boincer umatlas      4096 Oct 13 01:06 shared
[2025-10-13 04:13:01] -rw-r--r-- 2 boincer umatlas    569683 Oct 13 01:06 input.tar.gz
[2025-10-13 04:13:01] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 01:06 start_atlas.sh
[2025-10-13 04:13:01] -rw-r--r-- 1 boincer umatlas         0 Oct 13 01:06 boinc_lockfile
[2025-10-13 04:13:01] -rw-r--r-- 1 boincer umatlas      2550 Oct 13 01:06 pandaJob.out
[2025-10-13 04:13:01] -rw------- 1 boincer umatlas    974365 Oct 13 01:06 agis_schedconf.cvmfs.json
[2025-10-13 04:13:01] drwx------ 5 boincer umatlas      4096 Oct 13 01:06 pilot3
[2025-10-13 04:13:01] -rw------- 1 boincer umatlas 196521788 Oct 13 04:11 HITS.46676269._092984.pool.root.1
[2025-10-13 04:13:01] -rw-r--r-- 1 boincer umatlas       531 Oct 13 04:11 boinc_task_state.xml
[2025-10-13 04:13:01] -rw------- 1 boincer umatlas      1079 Oct 13 04:11 memory_monitor_summary.json
[2025-10-13 04:13:01] -rw------- 1 boincer umatlas   1560580 Oct 13 04:11 agis_ddmendpoints.agis.ALL.json
[2025-10-13 04:13:01] -rw------- 1 boincer umatlas    417558 Oct 13 04:11 log.46676269._092984.job.log.tgz.1
[2025-10-13 04:13:01] -rw-r--r-- 1 boincer umatlas      5952 Oct 13 04:11 init_data.xml
[2025-10-13 04:13:01] -rw------- 1 boincer umatlas      7854 Oct 13 04:11 heartbeat.json
[2025-10-13 04:13:01] -rw------- 1 boincer umatlas        95 Oct 13 04:12 pilot_heartbeat.json
[2025-10-13 04:13:01] -rw-r--r-- 1 boincer umatlas      8192 Oct 13 04:12 boinc_mmap_file
[2025-10-13 04:13:01] -rw-r--r-- 1 boincer umatlas        28 Oct 13 04:12 wrapper_checkpoint.txt
[2025-10-13 04:13:01] -rw------- 1 boincer umatlas      4821 Oct 13 04:13 pilotlog.txt
[2025-10-13 04:13:01] -rw------- 1 boincer umatlas   1570470 Oct 13 04:13 log.46676269._092984.job.log.1
[2025-10-13 04:13:01] -rw------- 1 boincer umatlas       357 Oct 13 04:13 output.list
[2025-10-13 04:13:01] -rw-r--r-- 1 boincer umatlas       620 Oct 13 04:13 runtime_log
[2025-10-13 04:13:01] -rw------- 1 boincer umatlas   2007040 Oct 13 04:13 result.tar.gz
[2025-10-13 04:13:01] -rw-r--r-- 1 boincer umatlas      8704 Oct 13 04:13 runtime_log.err
[2025-10-13 04:13:01] -rw------- 1 boincer umatlas       661 Oct 13 04:13 fJyLDmtPLS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmCBmNDmSmYeCo.diag
[2025-10-13 04:13:01] -rw-r--r-- 1 boincer umatlas     20907 Oct 13 04:13 stderr.txt
[2025-10-13 04:13:01] HITS file was successfully produced:
[2025-10-13 04:13:01] -rw------- 1 boincer umatlas 196521788 Oct 13 04:11 shared/HITS.pool.root.1
[2025-10-13 04:13:01]  *** Contents of shared directory: ***
[2025-10-13 04:13:01] total 411100
[2025-10-13 04:13:01] -rw-r--r-- 2 boincer umatlas 221840282 Oct 13 01:06 ATLAS.root_0
[2025-10-13 04:13:01] -rw-r--r-- 2 boincer umatlas    569683 Oct 13 01:06 input.tar.gz
[2025-10-13 04:13:01] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 01:06 start_atlas.sh
[2025-10-13 04:13:01] -rw------- 1 boincer umatlas 196521788 Oct 13 04:11 HITS.pool.root.1
[2025-10-13 04:13:01] -rw------- 1 boincer umatlas   2007040 Oct 13 04:13 result.tar.gz
04:13:02 (17780): run_atlas exited; CPU time 81861.729410
04:13:02 (17780): called boinc_finish(0)

</stderr_txt>
]]>

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