Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:20:45 (2717499): wrapper (7.7.26015): starting
05:20:45 (2717499): wrapper: running run_atlas (--nthreads 6)
[2025-10-14 05:20:45] Arguments: --nthreads 6
[2025-10-14 05:20:45] Threads: 6
[2025-10-14 05:20:45] Checking for CVMFS
[2025-10-14 05:21:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-14 05:21:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-14 05:21:33] Running cvmfs_config stat atlas.cern.ch
[2025-10-14 05:21:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-14 05:21:34] 2.11.5.0 2717720 0 30840 151672 3 1 42931160 52428801 0 130560 0 0 0.000 1293 58 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-10-14 05:21:34] CVMFS is ok
[2025-10-14 05:21:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-14 05:21:34] Checking for apptainer binary...
[2025-10-14 05:21:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-14 05:21:34] Running /usr/bin/apptainer --version
[2025-10-14 05:21:34] apptainer version 1.3.6-1.el9
[2025-10-14 05:21:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-14 05:21:34] testio002
[2025-10-14 05:21:34] apptainer works
[2025-10-14 05:21:34] Set ATHENA_PROC_NUMBER=6
[2025-10-14 05:21:34] Set ATHENA_CORE_NUMBER=6
[2025-10-14 05:21:34] Starting ATLAS job with PandaID=6840969828
[2025-10-14 05:21:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-14 06:38:28]  *** The last 200 lines of the pilot log: ***
[2025-10-14 06:38:28] 2025-10-13 21:36:59,043 | INFO     | monitor loop #336: job 0:6840969828 is in state 'finished'
[2025-10-14 06:38:28] 2025-10-13 21:36:59,043 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 06:38:28] 2025-10-13 21:37:00,178 | INFO     | time since job start (4426s) is within the limit (172800.0s)
[2025-10-14 06:38:28] 2025-10-13 21:37:01,546 | INFO     | monitor loop #337: job 0:6840969828 is in state 'finished'
[2025-10-14 06:38:28] 2025-10-13 21:37:01,546 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 06:38:28] 2025-10-13 21:37:02,183 | INFO     | time since job start (4428s) is within the limit (172800.0s)
[2025-10-14 06:38:28] 2025-10-13 21:37:04,049 | INFO     | monitor loop #338: job 0:6840969828 is in state 'finished'
[2025-10-14 06:38:28] 2025-10-13 21:37:04,049 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 06:38:28] 2025-10-13 21:37:04,189 | INFO     | time since job start (4430s) is within the limit (172800.0s)
[2025-10-14 06:38:28] 2025-10-13 21:37:06,194 | INFO     | time since job start (4432s) is within the limit (172800.0s)
[2025-10-14 06:38:28] 2025-10-13 21:37:06,552 | INFO     | monitor loop #339: job 0:6840969828 is in state 'finished'
[2025-10-14 06:38:28] 2025-10-13 21:37:06,552 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 06:38:28] 2025-10-13 21:37:08,200 | INFO     | time since job start (4434s) is within the limit (172800.0s)
[2025-10-14 06:38:28] 2025-10-13 21:37:09,055 | INFO     | monitor loop #340: job 0:6840969828 is in state 'finished'
[2025-10-14 06:38:28] 2025-10-13 21:37:09,055 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 06:38:28] 2025-10-13 21:37:10,205 | INFO     | time since job start (4436s) is within the limit (172800.0s)
[2025-10-14 06:38:28] 2025-10-13 21:37:11,558 | INFO     | monitor loop #341: job 0:6840969828 is in state 'finished'
[2025-10-14 06:38:28] 2025-10-13 21:37:11,558 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 06:38:28] 2025-10-13 21:37:12,210 | INFO     | time since job start (4438s) is within the limit (172800.0s)
[2025-10-14 06:38:28] 2025-10-13 21:37:14,061 | INFO     | monitor loop #342: job 0:6840969828 is in state 'finished'
[2025-10-14 06:38:28] 2025-10-13 21:37:14,061 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 06:38:28] 2025-10-13 21:37:14,215 | INFO     | time since job start (4440s) is within the limit (172800.0s)
[2025-10-14 06:38:28] 2025-10-13 21:37:16,220 | INFO     | time since job start (4442s) is within the limit (172800.0s)
[2025-10-14 06:38:28] 2025-10-13 21:37:16,564 | INFO     | monitor loop #343: job 0:6840969828 is in state 'finished'
[2025-10-14 06:38:28] 2025-10-13 21:37:16,564 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 06:38:28] 2025-10-13 21:37:18,226 | INFO     | time since job start (4444s) is within the limit (172800.0s)
[2025-10-14 06:38:28] 2025-10-13 21:37:19,067 | INFO     | monitor loop #344: job 0:6840969828 is in state 'finished'
[2025-10-14 06:38:28] 2025-10-13 21:37:19,067 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 06:38:28] 2025-10-13 21:37:19,271 | INFO     | PID=2721989 has CPU usage=0.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-14 06:38:28] 2025-10-13 21:37:19,272 | INFO     | .. there are 2 such processes running
[2025-10-14 06:38:28] 2025-10-13 21:37:20,272 | INFO     | time since job start (4446s) is within the limit (172800.0s)
[2025-10-14 06:38:28] 2025-10-13 21:37:21,569 | INFO     | monitor loop #345: job 0:6840969828 is in state 'finished'
[2025-10-14 06:38:28] 2025-10-13 21:37:21,569 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 06:38:28] 2025-10-13 21:37:22,276 | INFO     | time since job start (4448s) is within the limit (172800.0s)
[2025-10-14 06:38:28] 2025-10-13 21:37:23,953 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-14 06:38:28] 2025-10-13 21:37:23,954 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 4399.984375
[2025-10-14 06:38:28] 2025-10-13 21:37:23,955 | INFO     | using path: /var/lib/boinc/slots/4/PanDA_Pilot-6840969828/memory_monitor_summary.json (trf name=prmon)
[2025-10-14 06:38:28] 2025-10-13 21:37:23,955 | INFO     | extracted standard info from prmon json
[2025-10-14 06:38:28] 2025-10-13 21:37:23,955 | INFO     | extracted standard memory fields from prmon json
[2025-10-14 06:38:28] 2025-10-13 21:37:23,955 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-14 06:38:28] 2025-10-13 21:37:23,955 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-14 06:38:28] 2025-10-13 21:37:23,955 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-14 06:38:28] 2025-10-13 21:37:23,956 | INFO     | fitting pss+swap vs Time
[2025-10-14 06:38:28] 2025-10-13 21:37:23,956 | INFO     | sum of square deviations: 85136480.0
[2025-10-14 06:38:28] 2025-10-13 21:37:23,956 | INFO     | sum of deviations: -5426427203.0
[2025-10-14 06:38:28] 2025-10-13 21:37:23,956 | INFO     | mean x: 1760389272.0
[2025-10-14 06:38:28] 2025-10-13 21:37:23,956 | INFO     | mean y: 2550647.6923076925
[2025-10-14 06:38:28] 2025-10-13 21:37:23,956 | INFO     | -- intersect: 112206205690.16254
[2025-10-14 06:38:28] 2025-10-13 21:37:23,956 | INFO     | intersect: 112206205690.16254
[2025-10-14 06:38:28] 2025-10-13 21:37:23,956 | INFO     | chi2: 0.042868008649500265
[2025-10-14 06:38:28] 2025-10-13 21:37:23,956 | INFO     | -- intersect: 112206205690.16254
[2025-10-14 06:38:28] 2025-10-13 21:37:23,956 | INFO     | current memory leak: -63.74 B/s (using 65 data points, chi2=0.04)
[2025-10-14 06:38:28] 2025-10-13 21:37:23,956 | INFO     | could have reported an average CPU frequency of 4034 MHz (6 samples)
[2025-10-14 06:38:28] 2025-10-13 21:37:23,956 | INFO     | ..............................
[2025-10-14 06:38:28] 2025-10-13 21:37:23,956 | INFO     | . Timing measurements:
[2025-10-14 06:38:28] 2025-10-13 21:37:23,956 | INFO     | . get job = 0 s
[2025-10-14 06:38:28] 2025-10-13 21:37:23,956 | INFO     | . initial setup = 6 s
[2025-10-14 06:38:28] 2025-10-13 21:37:23,956 | INFO     | . payload setup = 3 s
[2025-10-14 06:38:28] 2025-10-13 21:37:23,956 | INFO     | . stage-in = 0 s
[2025-10-14 06:38:28] 2025-10-13 21:37:23,956 | INFO     | . payload execution = 4351 s
[2025-10-14 06:38:28] 2025-10-13 21:37:23,956 | INFO     | . stage-out = 0 s
[2025-10-14 06:38:28] 2025-10-13 21:37:23,956 | INFO     | . log creation = 0 s
[2025-10-14 06:38:28] 2025-10-13 21:37:23,956 | INFO     | ..............................
[2025-10-14 06:38:28] 2025-10-13 21:37:23,984 | INFO     | 
[2025-10-14 06:38:28] 2025-10-13 21:37:23,984 | INFO     | job summary report
[2025-10-14 06:38:28] 2025-10-13 21:37:23,984 | INFO     | --------------------------------------------------
[2025-10-14 06:38:28] 2025-10-13 21:37:23,984 | INFO     | PanDA job id: 6840969828
[2025-10-14 06:38:28] 2025-10-13 21:37:23,984 | INFO     | task id: 46676269
[2025-10-14 06:38:28] 2025-10-13 21:37:23,984 | INFO     | errors: (none)
[2025-10-14 06:38:28] 2025-10-13 21:37:23,984 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-14 06:38:28] 2025-10-13 21:37:23,984 | INFO     | pilot state: finished 
[2025-10-14 06:38:28] 2025-10-13 21:37:23,984 | INFO     | transexitcode: 0
[2025-10-14 06:38:28] 2025-10-13 21:37:23,984 | INFO     | exeerrorcode: 0
[2025-10-14 06:38:28] 2025-10-13 21:37:23,984 | INFO     | exeerrordiag: 
[2025-10-14 06:38:28] 2025-10-13 21:37:23,984 | INFO     | exitcode: 0
[2025-10-14 06:38:28] 2025-10-13 21:37:23,984 | INFO     | exitmsg: OK
[2025-10-14 06:38:28] 2025-10-13 21:37:23,984 | INFO     | cpuconsumptiontime: 23696 s
[2025-10-14 06:38:28] 2025-10-13 21:37:23,984 | INFO     | nevents: 400
[2025-10-14 06:38:28] 2025-10-13 21:37:23,984 | INFO     | neventsw: 0
[2025-10-14 06:38:28] 2025-10-13 21:37:23,984 | INFO     | pid: 2728799
[2025-10-14 06:38:28] 2025-10-13 21:37:23,984 | INFO     | pgrp: 2728799
[2025-10-14 06:38:28] 2025-10-13 21:37:23,984 | INFO     | corecount: 6
[2025-10-14 06:38:28] 2025-10-13 21:37:23,984 | INFO     | event service: False
[2025-10-14 06:38:28] 2025-10-13 21:37:23,985 | INFO     | sizes: {0: 2348857, 4: 2349119, 11: 2349147, 4358: 2375151, 4359: 2384149, 4361: 2384205, 4436: 2384527}
[2025-10-14 06:38:28] 2025-10-13 21:37:23,985 | INFO     | --------------------------------------------------
[2025-10-14 06:38:28] 2025-10-13 21:37:23,985 | INFO     | 
[2025-10-14 06:38:28] 2025-10-13 21:37:23,985 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2025-10-14 06:38:28] 2025-10-13 21:37:23,992 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-14 06:38:28] 2025-10-13 21:37:23,992 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-14 06:38:28] 2025-10-13 21:37:23,992 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-14 06:38:28] 2025-10-13 21:37:23,992 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-14 06:38:28] 2025-10-13 21:37:23,993 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-14 06:38:28] 2025-10-13 21:37:23,993 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-14 06:38:28] 2025-10-13 21:37:23,993 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-14 06:38:28] 2025-10-13 21:37:23,993 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-14 06:38:28] 2025-10-13 21:37:23,993 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-14 06:38:28] 2025-10-13 21:37:23,993 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-14 06:38:28] 2025-10-13 21:37:23,993 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-14 06:38:28] 2025-10-13 21:37:23,993 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-14 06:38:28] 2025-10-13 21:37:23,993 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-14 06:38:28] 2025-10-13 21:37:23,993 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-14 06:38:28] 2025-10-13 21:37:23,993 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-14 06:38:28] 2025-10-13 21:37:23,993 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-14 06:38:28] 2025-10-13 21:37:23,993 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-14 06:38:28] 2025-10-13 21:37:23,993 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-14 06:38:28] 2025-10-13 21:37:23,993 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-14 06:38:28] 2025-10-13 21:37:23,993 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-14 06:38:28] 2025-10-13 21:37:23,993 | INFO     | job 6840969828 has completed (purged errors)
[2025-10-14 06:38:28] 2025-10-13 21:37:23,993 | INFO     | overall cleanup function is called
[2025-10-14 06:38:28] 2025-10-13 21:37:24,999 | INFO     | --- collectZombieJob: --- 10, [2728799]
[2025-10-14 06:38:28] 2025-10-13 21:37:24,999 | INFO     | zombie collector waiting for pid 2728799
[2025-10-14 06:38:28] 2025-10-13 21:37:24,999 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-14 06:38:28] 2025-10-13 21:37:24,999 | INFO     | collected zombie processes
[2025-10-14 06:38:28] 2025-10-13 21:37:24,999 | INFO     | will attempt to kill all subprocesses of pid=2728799
[2025-10-14 06:38:28] 2025-10-13 21:37:25,032 | INFO     | process IDs to be killed: [2728799] (in reverse order)
[2025-10-14 06:38:28] 2025-10-13 21:37:25,046 | WARNING  | found no corresponding commands to process id(s)
[2025-10-14 06:38:28] 2025-10-13 21:37:25,046 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-14 06:38:28] 2025-10-13 21:37:25,048 | INFO     | did not find any defunct processes belonging to 2728799
[2025-10-14 06:38:28] 2025-10-13 21:37:25,049 | INFO     | did not find any defunct processes belonging to 2728799
[2025-10-14 06:38:28] 2025-10-13 21:37:25,049 | INFO     | ready for new job
[2025-10-14 06:38:28] 2025-10-13 21:37:25,049 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-14 06:38:28] 2025-10-13 21:37:25,049 | INFO     | ***************************************
[2025-10-14 06:38:28] 2025-10-13 21:37:25,049 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-14 06:38:28] 2025-10-13 21:37:25,049 | INFO     | ***************************************
[2025-10-14 06:38:28] 2025-10-13 21:37:25,049 | INFO     | 
[2025-10-14 06:38:28] 2025-10-13 21:37:25,050 | INFO     | architecture information:
[2025-10-14 06:38:28] 2025-10-13 21:37:25,050 | INFO     | executing command: cat /etc/os-release
[2025-10-14 06:38:28] 2025-10-13 21:37:25,057 | INFO     | cat /etc/os-release:
[2025-10-14 06:38:28] NAME="CentOS Linux"
[2025-10-14 06:38:28] VERSION="7 (Core)"
[2025-10-14 06:38:28] ID="centos"
[2025-10-14 06:38:28] ID_LIKE="rhel fedora"
[2025-10-14 06:38:28] VERSION_ID="7"
[2025-10-14 06:38:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-14 06:38:28] ANSI_COLOR="0;31"
[2025-10-14 06:38:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-14 06:38:28] HOME_URL="https://www.centos.org/"
[2025-10-14 06:38:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-14 06:38:28] 
[2025-10-14 06:38:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-14 06:38:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-14 06:38:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-14 06:38:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-14 06:38:28] 
[2025-10-14 06:38:28] 2025-10-13 21:37:25,058 | INFO     | ***************************************
[2025-10-14 06:38:28] 2025-10-13 21:37:25,560 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2025-10-14 06:38:28] 2025-10-13 21:37:25,566 | INFO     | sufficient remaining disk space (302076919808 B)
[2025-10-14 06:38:28] 2025-10-13 21:37:25,567 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-14 06:38:28] 2025-10-13 21:37:25,567 | INFO     | current server update state: UPDATING_FINAL
[2025-10-14 06:38:28] 2025-10-13 21:37:25,567 | INFO     | update_server=False
[2025-10-14 06:38:28] 2025-10-13 21:37:25,567 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-14 06:38:28] 2025-10-13 21:37:25,567 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-14 06:38:28] 2025-10-13 21:37:25,567 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-14 06:38:28] 2025-10-13 21:37:25,567 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-14 06:38:28] 2025-10-13 21:37:25,567 | INFO     | aborting loop
[2025-10-14 06:38:28] 2025-10-13 21:37:25,758 | INFO     | all job control threads have been joined
[2025-10-14 06:38:28] 2025-10-13 21:37:26,086 | INFO     | all payload control threads have been joined
[2025-10-14 06:38:28] 2025-10-13 21:37:26,373 | INFO     | all data control threads have been joined
[2025-10-14 06:38:28] 2025-10-13 21:37:26,571 | INFO     | [job] retrieve thread has finished
[2025-10-14 06:38:28] 2025-10-13 21:37:26,572 | INFO     | [job] job monitor thread has finished
[2025-10-14 06:38:28] 2025-10-13 21:37:26,572 | INFO     | [job] queue monitor thread has finished
[2025-10-14 06:38:28] 2025-10-13 21:37:26,763 | INFO     | [job] control thread has finished
[2025-10-14 06:38:28] 2025-10-13 21:37:26,808 | INFO     | [payload] validate_pre thread has finished
[2025-10-14 06:38:28] 2025-10-13 21:37:27,072 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-14 06:38:28] 2025-10-13 21:37:27,091 | INFO     | [payload] control thread has finished
[2025-10-14 06:38:28] 2025-10-13 21:37:27,273 | INFO     | [job] create_data_payload thread has finished
[2025-10-14 06:38:28] 2025-10-13 21:37:27,281 | INFO     | [job] validate thread has finished
[2025-10-14 06:38:28] 2025-10-13 21:37:27,306 | INFO     | [payload] failed_post thread has finished
[2025-10-14 06:38:28] 2025-10-13 21:37:27,308 | INFO     | [data] copytool_in thread has finished
[2025-10-14 06:38:28] 2025-10-13 21:37:27,361 | INFO     | [payload] execute_payloads thread has finished
[2025-10-14 06:38:28] 2025-10-13 21:37:27,378 | INFO     | [data] control thread has finished
[2025-10-14 06:38:28] 2025-10-13 21:37:27,573 | INFO     | [data] copytool_out thread has finished
[2025-10-14 06:38:28] 2025-10-13 21:37:27,908 | INFO     | [payload] validate_post thread has finished
[2025-10-14 06:38:28] 2025-10-13 21:37:31,077 | INFO     | [data] queue_monitor thread has finished
[2025-10-14 06:38:28] 2025-10-13 21:37:35,741 | INFO     | job.realtimelogging is not enabled
[2025-10-14 06:38:28] 2025-10-13 21:37:36,742 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-14 06:38:28] 2025-10-13 21:37:55,382 | INFO     | PID=2721989 has CPU usage=0.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-14 06:38:28] 2025-10-13 21:37:55,382 | INFO     | .. there are 2 such processes running
[2025-10-14 06:38:28] 2025-10-13 21:37:55,382 | INFO     | found 0 job(s) in 20 queues
[2025-10-14 06:38:28] 2025-10-13 21:37:55,382 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-14 06:38:28] 2025-10-13 21:37:55,382 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-14 06:38:28] 2025-10-13 21:38:07,680 [wrapper] supervise_pilot (15 min periods counter: 6)
[2025-10-14 06:38:28] 2025-10-13 21:38:21,826 | INFO     | [monitor] cgroup control has ended
[2025-10-14 06:38:28] 2025-10-13 21:38:23,385 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140042508277568)>', '<ExcThread(monitor, started 140041997231872)>']
[2025-10-14 06:38:28] 2025-10-13 21:38:23,522 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-14 06:38:28] 2025-10-13 21:38:23,522 | INFO     | [monitor] control thread has ended
[2025-10-14 06:38:28] 2025-10-13 21:38:28,409 | INFO     | all workflow threads have been joined
[2025-10-14 06:38:28] 2025-10-13 21:38:28,409 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-14 06:38:28] 2025-10-13 21:38:28,409 | INFO     | traces error code: 0
[2025-10-14 06:38:28] 2025-10-13 21:38:28,409 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-14 06:38:28] 2025-10-13 21:38:28,451 [wrapper] ==== pilot stdout END ====
[2025-10-14 06:38:28] 2025-10-13 21:38:28,452 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-14 06:38:28] 2025-10-13 21:38:28,452 [wrapper] pilotpid: 2721989
[2025-10-14 06:38:28] 2025-10-13 21:38:28,453 [wrapper] Pilot exit status: 0
[2025-10-14 06:38:28] 2025-10-13 21:38:28,456 [wrapper] pandaids: 6840969828
[2025-10-14 06:38:28] 2025-10-13 21:38:28,463 [wrapper] cleanup supervisor_pilot 2765134 2721990
[2025-10-14 06:38:28] 2025-10-13 21:38:28,464 [wrapper] Test setup, not cleaning
[2025-10-14 06:38:28] 2025-10-13 21:38:28,465 [wrapper] apfmon messages muted
[2025-10-14 06:38:28] 2025-10-13 21:38:28,465 [wrapper] ==== wrapper stdout END ====
[2025-10-14 06:38:28] 2025-10-13 21:38:28,466 [wrapper] ==== wrapper stderr END ====
[2025-10-14 06:38:28]  *** Error codes and diagnostics ***
[2025-10-14 06:38:28]     "exeErrorCode": 0,
[2025-10-14 06:38:28]     "exeErrorDiag": "",
[2025-10-14 06:38:28]     "pilotErrorCode": 0,
[2025-10-14 06:38:28]     "pilotErrorDiag": "",
[2025-10-14 06:38:28]  *** Listing of results directory ***
[2025-10-14 06:38:28] total 409172
[2025-10-14 06:38:28] -rw-r--r--. 1 boinc boinc    557409 Oct 13 08:11 pilot3.tar.gz
[2025-10-14 06:38:28] -rw-r--r--. 1 boinc boinc      5112 Oct 13 08:50 queuedata.json
[2025-10-14 06:38:28] -rwx------. 1 boinc boinc     36292 Oct 13 08:51 runpilot2-wrapper.sh
[2025-10-14 06:38:28] -rw-r--r--. 1 boinc boinc       100 Oct 14 05:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-14 06:38:28] -rwxr-xr-x. 1 boinc boinc      7986 Oct 14 05:20 run_atlas
[2025-10-14 06:38:28] -rw-r--r--. 1 boinc boinc       105 Oct 14 05:20 job.xml
[2025-10-14 06:38:28] -rw-r--r--. 2 boinc boinc     15120 Oct 14 05:20 start_atlas.sh
[2025-10-14 06:38:28] drwxrwx--x. 2 boinc boinc        68 Oct 14 05:20 shared
[2025-10-14 06:38:28] -rw-r--r--. 2 boinc boinc    569684 Oct 14 05:20 input.tar.gz
[2025-10-14 06:38:28] -rw-r--r--. 1 boinc boinc      9628 Oct 14 05:20 init_data.xml
[2025-10-14 06:38:28] -rw-r--r--. 2 boinc boinc 223538270 Oct 14 05:20 EVNT.46676267._004669.pool.root.1
[2025-10-14 06:38:28] -rw-r--r--. 1 boinc boinc         0 Oct 14 05:20 boinc_lockfile
[2025-10-14 06:38:28] -rw-r--r--. 1 boinc boinc      2550 Oct 14 05:21 pandaJob.out
[2025-10-14 06:38:28] -rw-------. 1 boinc boinc    972799 Oct 14 05:23 agis_schedconf.cvmfs.json
[2025-10-14 06:38:28] -rw-------. 1 boinc boinc   1560580 Oct 14 05:23 agis_ddmendpoints.agis.ALL.json
[2025-10-14 06:38:28] drwx------. 5 boinc boinc      4096 Oct 14 05:23 pilot3
[2025-10-14 06:38:28] -rw-------. 1 boinc boinc 189656215 Oct 14 06:35 HITS.46676269._092512.pool.root.1
[2025-10-14 06:38:28] -rw-r--r--. 1 boinc boinc       530 Oct 14 06:35 boinc_task_state.xml
[2025-10-14 06:38:28] -rw-------. 1 boinc boinc      1021 Oct 14 06:36 memory_monitor_summary.json
[2025-10-14 06:38:28] -rw-------. 1 boinc boinc    297115 Oct 14 06:36 log.46676269._092512.job.log.tgz.1
[2025-10-14 06:38:28] -rw-------. 1 boinc boinc      7793 Oct 14 06:37 heartbeat.json
[2025-10-14 06:38:28] -rw-------. 1 boinc boinc        95 Oct 14 06:37 pilot_heartbeat.json
[2025-10-14 06:38:28] -rw-r--r--. 1 boinc boinc        27 Oct 14 06:38 wrapper_checkpoint.txt
[2025-10-14 06:38:28] -rw-r--r--. 1 boinc boinc      8192 Oct 14 06:38 boinc_mmap_file
[2025-10-14 06:38:28] -rw-------. 1 boinc boinc      4896 Oct 14 06:38 pilotlog.txt
[2025-10-14 06:38:28] -rw-------. 1 boinc boinc    656032 Oct 14 06:38 log.46676269._092512.job.log.1
[2025-10-14 06:38:28] -rw-------. 1 boinc boinc       357 Oct 14 06:38 output.list
[2025-10-14 06:38:28] -rw-r--r--. 1 boinc boinc       620 Oct 14 06:38 runtime_log
[2025-10-14 06:38:28] -rw-------. 1 boinc boinc    972800 Oct 14 06:38 result.tar.gz
[2025-10-14 06:38:28] -rw-r--r--. 1 boinc boinc      8661 Oct 14 06:38 runtime_log.err
[2025-10-14 06:38:28] -rw-------. 1 boinc boinc       643 Oct 14 06:38 gHHNDmr1KS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmWJVMDmswtK7n.diag
[2025-10-14 06:38:28] -rw-r--r--. 1 boinc boinc     21897 Oct 14 06:38 stderr.txt
[2025-10-14 06:38:28] HITS file was successfully produced:
[2025-10-14 06:38:28] -rw-------. 1 boinc boinc 189656215 Oct 14 06:35 shared/HITS.pool.root.1
[2025-10-14 06:38:28]  *** Contents of shared directory: ***
[2025-10-14 06:38:28] total 405040
[2025-10-14 06:38:28] -rw-r--r--. 2 boinc boinc     15120 Oct 14 05:20 start_atlas.sh
[2025-10-14 06:38:28] -rw-r--r--. 2 boinc boinc    569684 Oct 14 05:20 input.tar.gz
[2025-10-14 06:38:28] -rw-r--r--. 2 boinc boinc 223538270 Oct 14 05:20 ATLAS.root_0
[2025-10-14 06:38:28] -rw-------. 1 boinc boinc 189656215 Oct 14 06:35 HITS.pool.root.1
[2025-10-14 06:38:28] -rw-------. 1 boinc boinc    972800 Oct 14 06:38 result.tar.gz
06:38:30 (2717499): run_atlas exited; CPU time 23720.436020
06:38:30 (2717499): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN