Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
20:25:09 (3830472): wrapper (7.7.26015): starting
20:25:09 (3830472): wrapper: running run_atlas (--nthreads 2)
[2025-10-13 20:25:09] Arguments: --nthreads 2
[2025-10-13 20:25:09] Threads: 2
[2025-10-13 20:25:09] Checking for CVMFS
[2025-10-13 20:25:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 20:25:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 20:25:09] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 20:25:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 20:25:09] 2.9.2.0 2081766 7640 59748 151670 0 56 6371652 36864001 0 130560 0 4600438 99.988 262220 871 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 20:25:09] CVMFS is ok
[2025-10-13 20:25:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 20:25:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 20:25:09] Further information can be found at the LHC@home message board.
[2025-10-13 20:25:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 20:25:09] Checking for apptainer binary...
[2025-10-13 20:25:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 20:25:09] Running /usr/bin/apptainer --version
[2025-10-13 20:25:09] apptainer version 1.4.1-1.1
[2025-10-13 20:25:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 20:25:09] atlasA221
[2025-10-13 20:25:09] apptainer works
[2025-10-13 20:25:09] Set ATHENA_PROC_NUMBER=2
[2025-10-13 20:25:09] Set ATHENA_CORE_NUMBER=2
[2025-10-13 20:25:09] Starting ATLAS job with PandaID=6840969790
[2025-10-13 20:25:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 22:31:38]  *** The last 200 lines of the pilot log: ***
[2025-10-13 22:31:38] 2025-10-13 20:30:55,917 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 22:31:38] 2025-10-13 20:30:55,917 | INFO     | aborting loop
[2025-10-13 22:31:38] 2025-10-13 20:30:56,132 | INFO     | all job control threads have been joined
[2025-10-13 22:31:38] 2025-10-13 20:30:56,297 | INFO     | [job] queue monitor thread has finished
[2025-10-13 22:31:38] 2025-10-13 20:30:56,298 | INFO     | [job] retrieve thread has finished
[2025-10-13 22:31:38] 2025-10-13 20:30:56,313 | INFO     | [payload] control thread has finished
[2025-10-13 22:31:38] 2025-10-13 20:30:56,588 | INFO     | [payload] validate_post thread has finished
[2025-10-13 22:31:38] 2025-10-13 20:30:56,713 | INFO     | [payload] failed_post thread has finished
[2025-10-13 22:31:38] 2025-10-13 20:30:56,870 | INFO     | [data] control thread has finished
[2025-10-13 22:31:38] 2025-10-13 20:30:56,923 | INFO     | [job] job monitor thread has finished
[2025-10-13 22:31:38] 2025-10-13 20:30:57,138 | INFO     | [job] control thread has finished
[2025-10-13 22:31:38] 2025-10-13 20:30:57,358 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 22:31:38] 2025-10-13 20:30:57,392 | INFO     | [data] copytool_out thread has finished
[2025-10-13 22:31:38] 2025-10-13 20:30:57,532 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 22:31:38] 2025-10-13 20:30:57,548 | INFO     | [data] copytool_in thread has finished
[2025-10-13 22:31:38] 2025-10-13 20:30:57,592 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 22:31:38] 2025-10-13 20:30:57,596 | INFO     | [job] validate thread has finished
[2025-10-13 22:31:38] 2025-10-13 20:30:59,411 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 22:31:38] 2025-10-13 20:31:06,304 | INFO     | job.realtimelogging is not enabled
[2025-10-13 22:31:38] 2025-10-13 20:31:07,310 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 22:31:38] 2025-10-13 20:31:25,244 | INFO     | PID=3834180 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 22:31:38] 2025-10-13 20:31:25,244 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 22:31:38] 2025-10-13 20:31:25,244 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 22:31:38] 2025-10-13 20:31:25,244 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 22:31:38] 2025-10-13 20:31:32,982 | INFO     | [monitor] cgroup control has ended
[2025-10-13 22:31:38] 2025-10-13 20:31:33,102 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140092020119360)>', '<ExcThread(monitor, started 140091657791232)>']
[2025-10-13 22:31:38] 2025-10-13 20:31:33,287 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 22:31:38] 2025-10-13 20:31:33,288 | INFO     | [monitor] control thread has ended
[2025-10-13 22:31:38] 2025-10-13 20:31:38,128 | INFO     | all workflow threads have been joined
[2025-10-13 22:31:38] 2025-10-13 20:31:38,129 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 22:31:38] 2025-10-13 20:31:38,129 | INFO     | traces error code: 0
[2025-10-13 22:31:38] 2025-10-13 20:31:38,130 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 22:31:38] 2025-10-13 20:31:38,173 [wrapper] ==== pilot stdout END ====
[2025-10-13 22:31:38] 2025-10-13 20:31:38,176 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 22:31:38] 2025-10-13 20:31:38,178 [wrapper] pilotpid: 3834180
[2025-10-13 22:31:38] 2025-10-13 20:31:38,181 [wrapper] Pilot exit status: 0
[2025-10-13 22:31:38] 2025-10-13 20:31:38,187 [wrapper] pandaids: 6840969790
[2025-10-13 22:31:38] 2025-10-13 20:31:38,201 [wrapper] cleanup supervisor_pilot 3854532 3834181
[2025-10-13 22:31:38] 2025-10-13 20:31:38,203 [wrapper] Test setup, not cleaning
[2025-10-13 22:31:38] 2025-10-13 20:31:38,205 [wrapper] apfmon messages muted
[2025-10-13 22:31:38] 2025-10-13 20:31:38,207 [wrapper] ==== wrapper stdout END ====
[2025-10-13 22:31:38] 2025-10-13 20:31:38,209 [wrapper] ==== wrapper stderr END ====
[2025-10-13 22:31:38]  *** Error codes and diagnostics ***
[2025-10-13 22:31:38]     "exeErrorCode": 0,
[2025-10-13 22:31:38]     "exeErrorDiag": "",
[2025-10-13 22:31:38]     "pilotErrorCode": 0,
[2025-10-13 22:31:38]     "pilotErrorDiag": "",
[2025-10-13 22:31:38]  *** Listing of results directory ***
[2025-10-13 22:31:38] total 414672
[2025-10-13 22:31:38] -rw-r--r-- 1 boinc boinc    557409 Oct 13 01:11 pilot3.tar.gz
[2025-10-13 22:31:38] -rw-r--r-- 1 boinc boinc      5112 Oct 13 01:46 queuedata.json
[2025-10-13 22:31:38] -rwx------ 1 boinc boinc     36292 Oct 13 01:47 runpilot2-wrapper.sh
[2025-10-13 22:31:38] -rw-r--r-- 1 boinc boinc       100 Oct 13 20:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 22:31:38] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 20:25 run_atlas
[2025-10-13 22:31:38] -rw-r--r-- 1 boinc boinc       105 Oct 13 20:25 job.xml
[2025-10-13 22:31:38] -rw-r--r-- 2 boinc boinc 219181933 Oct 13 20:25 EVNT.46676267._004668.pool.root.1
[2025-10-13 22:31:38] -rw-r--r-- 2 boinc boinc    569684 Oct 13 20:25 input.tar.gz
[2025-10-13 22:31:38] -rw-r--r-- 2 boinc boinc     15120 Oct 13 20:25 start_atlas.sh
[2025-10-13 22:31:38] drwxrwx--x 2 boinc boinc      4096 Oct 13 20:25 shared
[2025-10-13 22:31:38] -rw-r--r-- 1 boinc boinc         0 Oct 13 20:25 boinc_setup_complete
[2025-10-13 22:31:38] -rw-r--r-- 1 boinc boinc      6285 Oct 13 20:25 init_data.xml
[2025-10-13 22:31:38] -rw-r--r-- 1 boinc boinc         0 Oct 13 20:25 boinc_lockfile
[2025-10-13 22:31:38] -rw-r--r-- 1 boinc boinc      2549 Oct 13 20:25 pandaJob.out
[2025-10-13 22:31:38] -rw------- 1 boinc boinc    972799 Oct 13 20:25 agis_schedconf.cvmfs.json
[2025-10-13 22:31:38] -rw------- 1 boinc boinc   1560580 Oct 13 20:25 agis_ddmendpoints.agis.ALL.json
[2025-10-13 22:31:38] drwx------ 5 boinc boinc      4096 Oct 13 20:25 pilot3
[2025-10-13 22:31:38] -rw------- 1 boinc boinc 198856695 Oct 13 22:30 HITS.46676269._092474.pool.root.1
[2025-10-13 22:31:38] -rw-r--r-- 1 boinc boinc       529 Oct 13 22:30 boinc_task_state.xml
[2025-10-13 22:31:38] -rw------- 1 boinc boinc      1014 Oct 13 22:30 memory_monitor_summary.json
[2025-10-13 22:31:38] -rw------- 1 boinc boinc    269743 Oct 13 22:30 log.46676269._092474.job.log.tgz.1
[2025-10-13 22:31:38] -rw------- 1 boinc boinc      7763 Oct 13 22:30 heartbeat.json
[2025-10-13 22:31:38] -rw-r--r-- 1 boinc boinc      8192 Oct 13 22:31 boinc_mmap_file
[2025-10-13 22:31:38] -rw-r--r-- 1 boinc boinc        27 Oct 13 22:31 wrapper_checkpoint.txt
[2025-10-13 22:31:38] -rw------- 1 boinc boinc        95 Oct 13 22:31 pilot_heartbeat.json
[2025-10-13 22:31:38] -rw------- 1 boinc boinc      4824 Oct 13 22:31 pilotlog.txt
[2025-10-13 22:31:38] -rw------- 1 boinc boinc   1085173 Oct 13 22:31 log.46676269._092474.job.log.1
[2025-10-13 22:31:38] -rw------- 1 boinc boinc       357 Oct 13 22:31 output.list
[2025-10-13 22:31:38] -rw-r--r-- 1 boinc boinc       620 Oct 13 22:31 runtime_log
[2025-10-13 22:31:38] -rw------- 1 boinc boinc   1372160 Oct 13 22:31 result.tar.gz
[2025-10-13 22:31:38] -rw-r--r-- 1 boinc boinc      8792 Oct 13 22:31 runtime_log.err
[2025-10-13 22:31:38] -rw------- 1 boinc boinc       662 Oct 13 22:31 pKNNDmnxKS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmDJVMDmT1R4Xo.diag
[2025-10-13 22:31:38] -rw-r--r-- 1 boinc boinc      6694 Oct 13 22:31 stderr.txt
[2025-10-13 22:31:38] HITS file was successfully produced:
[2025-10-13 22:31:38] -rw------- 1 boinc boinc 198856695 Oct 13 22:30 shared/HITS.pool.root.1
[2025-10-13 22:31:38]  *** Contents of shared directory: ***
[2025-10-13 22:31:38] total 410164
[2025-10-13 22:31:38] -rw-r--r-- 2 boinc boinc 219181933 Oct 13 20:25 ATLAS.root_0
[2025-10-13 22:31:38] -rw-r--r-- 2 boinc boinc    569684 Oct 13 20:25 input.tar.gz
[2025-10-13 22:31:38] -rw-r--r-- 2 boinc boinc     15120 Oct 13 20:25 start_atlas.sh
[2025-10-13 22:31:38] -rw------- 1 boinc boinc 198856695 Oct 13 22:30 HITS.pool.root.1
[2025-10-13 22:31:38] -rw------- 1 boinc boinc   1372160 Oct 13 22:31 result.tar.gz
22:31:40 (3830472): run_atlas exited; CPU time 14687.395944
22:31:40 (3830472): called boinc_finish(0)

</stderr_txt>
]]>

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