Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
00:57:31 (18615): wrapper (7.7.26015): starting
00:57:31 (18615): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 00:57:31] Arguments: --nthreads 8
[2025-10-13 00:57:31] Threads: 8
[2025-10-13 00:57:31] Checking for CVMFS
[2025-10-13 00:57:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 00:57:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 00:57:31] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 00:57:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 00:57:32] 2.11.2.0 2876 206834 81488 151649 1 59 12800346 20275200 1 130560 3 73900032 99.977 10725622 9877 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 00:57:32] CVMFS is ok
[2025-10-13 00:57:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 00:57:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 00:57:32] Further information can be found at the LHC@home message board.
[2025-10-13 00:57:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 00:57:32] Checking for apptainer binary...
[2025-10-13 00:57:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 00:57:32] Running /usr/bin/apptainer --version
[2025-10-13 00:57:32] apptainer version 1.3.2-1.el7
[2025-10-13 00:57:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 00:57:33] c-204-5.aglt2.org
[2025-10-13 00:57:33] apptainer works
[2025-10-13 00:57:33] Set ATHENA_PROC_NUMBER=8
[2025-10-13 00:57:33] Set ATHENA_CORE_NUMBER=8
[2025-10-13 00:57:33] Starting ATLAS job with PandaID=6840850756
[2025-10-13 00:57:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 03:10:09]  *** The last 200 lines of the pilot log: ***
[2025-10-13 03:10:09] 2025-10-13 07:09:04,051 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 03:10:09] 2025-10-13 07:09:04,051 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 03:10:09] 2025-10-13 07:09:04,054 | INFO     | fitting pss+swap vs Time
[2025-10-13 03:10:09] 2025-10-13 07:09:04,055 | INFO     | sum of square deviations: 665612480.0
[2025-10-13 03:10:09] 2025-10-13 07:09:04,055 | INFO     | sum of deviations: 6019355376.999992
[2025-10-13 03:10:09] 2025-10-13 07:09:04,056 | INFO     | mean x: 1760335404.0
[2025-10-13 03:10:09] 2025-10-13 07:09:04,056 | INFO     | mean y: 2460957.7674418604
[2025-10-13 03:10:09] 2025-10-13 07:09:04,056 | INFO     | -- intersect: -15916838481.135586
[2025-10-13 03:10:09] 2025-10-13 07:09:04,056 | INFO     | intersect: -15916838481.135586
[2025-10-13 03:10:09] 2025-10-13 07:09:04,056 | INFO     | chi2: 2.363364645785148
[2025-10-13 03:10:09] 2025-10-13 07:09:04,057 | INFO     | sum of square deviations: 591173875.0
[2025-10-13 03:10:09] 2025-10-13 07:09:04,057 | INFO     | sum of deviations: 14217403864.5
[2025-10-13 03:10:09] 2025-10-13 07:09:04,058 | INFO     | mean x: 1760335251.5
[2025-10-13 03:10:09] 2025-10-13 07:09:04,058 | INFO     | mean y: 2477194.056451613
[2025-10-13 03:10:09] 2025-10-13 07:09:04,058 | INFO     | -- intersect: -42332609429.13319
[2025-10-13 03:10:09] 2025-10-13 07:09:04,058 | INFO     | intersect: -42332609429.13319
[2025-10-13 03:10:09] 2025-10-13 07:09:04,058 | INFO     | chi2: 1.5633737057262038
[2025-10-13 03:10:09] 2025-10-13 07:09:04,058 | INFO     | current chi2=1.5633737057262038 (change=33.84966181522844 %)
[2025-10-13 03:10:09] 2025-10-13 07:09:04,059 | INFO     | sum of square deviations: 522502820.0
[2025-10-13 03:10:09] 2025-10-13 07:09:04,059 | INFO     | sum of deviations: 13571520035.0
[2025-10-13 03:10:09] 2025-10-13 07:09:04,060 | INFO     | mean x: 1760335099.0
[2025-10-13 03:10:09] 2025-10-13 07:09:04,060 | INFO     | mean y: 2475758.9579831935
[2025-10-13 03:10:09] 2025-10-13 07:09:04,060 | INFO     | -- intersect: -45720575198.72337
[2025-10-13 03:10:09] 2025-10-13 07:09:04,060 | INFO     | intersect: -45720575198.72337
[2025-10-13 03:10:09] 2025-10-13 07:09:04,060 | INFO     | chi2: 1.5661571914192474
[2025-10-13 03:10:09] 2025-10-13 07:09:04,060 | INFO     | current chi2=1.5661571914192474 (change=-0.1780435274591357 %)
[2025-10-13 03:10:09] 2025-10-13 07:09:04,061 | INFO     | right removable region: 118
[2025-10-13 03:10:09] 2025-10-13 07:09:04,061 | INFO     | sum of square deviations: 591173875.0
[2025-10-13 03:10:09] 2025-10-13 07:09:04,061 | INFO     | sum of deviations: -13194131152.0
[2025-10-13 03:10:09] 2025-10-13 07:09:04,062 | INFO     | mean x: 1760335556.5
[2025-10-13 03:10:09] 2025-10-13 07:09:04,062 | INFO     | mean y: 2499623.4838709678
[2025-10-13 03:10:09] 2025-10-13 07:09:04,062 | INFO     | -- intersect: 39290599429.97465
[2025-10-13 03:10:09] 2025-10-13 07:09:04,062 | INFO     | intersect: 39290599429.97465
[2025-10-13 03:10:09] 2025-10-13 07:09:04,062 | INFO     | chi2: 0.9189619454524112
[2025-10-13 03:10:09] 2025-10-13 07:09:04,062 | INFO     | current chi2=0.9189619454524112 (change=61.116370802478635 %)
[2025-10-13 03:10:09] 2025-10-13 07:09:04,063 | INFO     | sum of square deviations: 522502820.0
[2025-10-13 03:10:09] 2025-10-13 07:09:04,063 | INFO     | sum of deviations: -12513202304.000004
[2025-10-13 03:10:09] 2025-10-13 07:09:04,063 | INFO     | mean x: 1760335709.0
[2025-10-13 03:10:09] 2025-10-13 07:09:04,063 | INFO     | mean y: 2497989.2605042015
[2025-10-13 03:10:09] 2025-10-13 07:09:04,064 | INFO     | -- intersect: 42160044334.50756
[2025-10-13 03:10:09] 2025-10-13 07:09:04,064 | INFO     | intersect: 42160044334.50756
[2025-10-13 03:10:09] 2025-10-13 07:09:04,064 | INFO     | chi2: 0.90400036569968
[2025-10-13 03:10:09] 2025-10-13 07:09:04,064 | INFO     | current chi2=0.90400036569968 (change=1.628095681956174 %)
[2025-10-13 03:10:09] 2025-10-13 07:09:04,064 | INFO     | left removable region: 20
[2025-10-13 03:10:09] 2025-10-13 07:09:04,064 | INFO     | sum of square deviations: 291817564.5
[2025-10-13 03:10:09] 2025-10-13 07:09:04,065 | INFO     | sum of deviations: 1384695363.9999998
[2025-10-13 03:10:09] 2025-10-13 07:09:04,065 | INFO     | mean x: 1760335678.5
[2025-10-13 03:10:09] 2025-10-13 07:09:04,065 | INFO     | mean y: 2501027.06122449
[2025-10-13 03:10:09] 2025-10-13 07:09:04,065 | INFO     | -- intersect: -8350418569.396939
[2025-10-13 03:10:09] 2025-10-13 07:09:04,065 | INFO     | intersect: -8350418569.396939
[2025-10-13 03:10:09] 2025-10-13 07:09:04,066 | INFO     | chi2: 0.00013851310582997634
[2025-10-13 03:10:09] 2025-10-13 07:09:04,066 | INFO     | -- intersect: -8350418569.396939
[2025-10-13 03:10:09] 2025-10-13 07:09:04,066 | INFO     | current memory leak: 4.75 B/s (using 98 data points, chi2=0.00)
[2025-10-13 03:10:09] 2025-10-13 07:09:04,066 | INFO     | could have reported an average CPU frequency of 1989 MHz (8 samples)
[2025-10-13 03:10:09] 2025-10-13 07:09:04,066 | INFO     | ..............................
[2025-10-13 03:10:09] 2025-10-13 07:09:04,067 | INFO     | . Timing measurements:
[2025-10-13 03:10:09] 2025-10-13 07:09:04,067 | INFO     | . get job = 0 s
[2025-10-13 03:10:09] 2025-10-13 07:09:04,067 | INFO     | . initial setup = 2 s
[2025-10-13 03:10:09] 2025-10-13 07:09:04,067 | INFO     | . payload setup = 7 s
[2025-10-13 03:10:09] 2025-10-13 07:09:04,067 | INFO     | . stage-in = 0 s
[2025-10-13 03:10:09] 2025-10-13 07:09:04,067 | INFO     | . payload execution = 7837 s
[2025-10-13 03:10:09] 2025-10-13 07:09:04,067 | INFO     | . stage-out = 0 s
[2025-10-13 03:10:09] 2025-10-13 07:09:04,067 | INFO     | . log creation = 0 s
[2025-10-13 03:10:09] 2025-10-13 07:09:04,068 | INFO     | ..............................
[2025-10-13 03:10:09] 2025-10-13 07:09:04,212 | INFO     | 
[2025-10-13 03:10:09] 2025-10-13 07:09:04,212 | INFO     | job summary report
[2025-10-13 03:10:09] 2025-10-13 07:09:04,212 | INFO     | --------------------------------------------------
[2025-10-13 03:10:09] 2025-10-13 07:09:04,213 | INFO     | PanDA job id: 6840850756
[2025-10-13 03:10:09] 2025-10-13 07:09:04,213 | INFO     | task id: 46676269
[2025-10-13 03:10:09] 2025-10-13 07:09:04,213 | INFO     | errors: (none)
[2025-10-13 03:10:09] 2025-10-13 07:09:04,213 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 03:10:09] 2025-10-13 07:09:04,213 | INFO     | pilot state: finished 
[2025-10-13 03:10:09] 2025-10-13 07:09:04,213 | INFO     | transexitcode: 0
[2025-10-13 03:10:09] 2025-10-13 07:09:04,214 | INFO     | exeerrorcode: 0
[2025-10-13 03:10:09] 2025-10-13 07:09:04,214 | INFO     | exeerrordiag: 
[2025-10-13 03:10:09] 2025-10-13 07:09:04,214 | INFO     | exitcode: 0
[2025-10-13 03:10:09] 2025-10-13 07:09:04,214 | INFO     | exitmsg: OK
[2025-10-13 03:10:09] 2025-10-13 07:09:04,214 | INFO     | cpuconsumptiontime: 57936 s
[2025-10-13 03:10:09] 2025-10-13 07:09:04,214 | INFO     | nevents: 400
[2025-10-13 03:10:09] 2025-10-13 07:09:04,215 | INFO     | neventsw: 0
[2025-10-13 03:10:09] 2025-10-13 07:09:04,215 | INFO     | pid: 28851
[2025-10-13 03:10:09] 2025-10-13 07:09:04,215 | INFO     | pgrp: 28851
[2025-10-13 03:10:09] 2025-10-13 07:09:04,215 | INFO     | corecount: 8
[2025-10-13 03:10:09] 2025-10-13 07:09:04,215 | INFO     | event service: False
[2025-10-13 03:10:09] 2025-10-13 07:09:04,215 | INFO     | sizes: {0: 2348684, 1: 2348883, 6: 2349145, 12: 2349173, 7849: 2376801, 7850: 2385799, 7852: 2385983, 7857: 2386177}
[2025-10-13 03:10:09] 2025-10-13 07:09:04,216 | INFO     | --------------------------------------------------
[2025-10-13 03:10:09] 2025-10-13 07:09:04,216 | INFO     | 
[2025-10-13 03:10:09] 2025-10-13 07:09:04,216 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 03:10:09] 2025-10-13 07:09:04,240 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 03:10:09] 2025-10-13 07:09:04,241 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 03:10:09] 2025-10-13 07:09:04,241 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 03:10:09] 2025-10-13 07:09:04,241 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 03:10:09] 2025-10-13 07:09:04,241 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 03:10:09] 2025-10-13 07:09:04,241 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 03:10:09] 2025-10-13 07:09:04,242 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 03:10:09] 2025-10-13 07:09:04,242 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 03:10:09] 2025-10-13 07:09:04,242 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 03:10:09] 2025-10-13 07:09:04,242 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 03:10:09] 2025-10-13 07:09:04,242 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 03:10:09] 2025-10-13 07:09:04,243 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 03:10:09] 2025-10-13 07:09:04,243 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 03:10:09] 2025-10-13 07:09:04,243 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 03:10:09] 2025-10-13 07:09:04,243 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 03:10:09] 2025-10-13 07:09:04,243 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 03:10:09] 2025-10-13 07:09:04,243 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 03:10:09] 2025-10-13 07:09:04,244 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 03:10:09] 2025-10-13 07:09:04,244 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 03:10:09] 2025-10-13 07:09:04,244 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 03:10:09] 2025-10-13 07:09:04,244 | INFO     | job 6840850756 has completed (purged errors)
[2025-10-13 03:10:09] 2025-10-13 07:09:04,244 | INFO     | overall cleanup function is called
[2025-10-13 03:10:09] 2025-10-13 07:09:05,252 | INFO     | --- collectZombieJob: --- 10, [28851]
[2025-10-13 03:10:09] 2025-10-13 07:09:05,252 | INFO     | zombie collector waiting for pid 28851
[2025-10-13 03:10:09] 2025-10-13 07:09:05,253 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 03:10:09] 2025-10-13 07:09:05,253 | INFO     | collected zombie processes
[2025-10-13 03:10:09] 2025-10-13 07:09:05,253 | INFO     | will attempt to kill all subprocesses of pid=28851
[2025-10-13 03:10:09] 2025-10-13 07:09:05,347 | INFO     | process IDs to be killed: [28851] (in reverse order)
[2025-10-13 03:10:09] 2025-10-13 07:09:05,399 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 03:10:09] 2025-10-13 07:09:05,399 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 03:10:09] 2025-10-13 07:09:05,404 | INFO     | did not find any defunct processes belonging to 28851
[2025-10-13 03:10:09] 2025-10-13 07:09:05,407 | INFO     | did not find any defunct processes belonging to 28851
[2025-10-13 03:10:09] 2025-10-13 07:09:05,408 | INFO     | ready for new job
[2025-10-13 03:10:09] 2025-10-13 07:09:05,408 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 03:10:09] 2025-10-13 07:09:05,410 | INFO     | ***************************************
[2025-10-13 03:10:09] 2025-10-13 07:09:05,410 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 03:10:09] 2025-10-13 07:09:05,410 | INFO     | ***************************************
[2025-10-13 03:10:09] 2025-10-13 07:09:05,410 | INFO     | 
[2025-10-13 03:10:09] 2025-10-13 07:09:05,411 | INFO     | architecture information:
[2025-10-13 03:10:09] 2025-10-13 07:09:05,411 | INFO     | executing command: cat /etc/os-release
[2025-10-13 03:10:09] 2025-10-13 07:09:05,428 | INFO     | cat /etc/os-release:
[2025-10-13 03:10:09] NAME="CentOS Linux"
[2025-10-13 03:10:09] VERSION="7 (Core)"
[2025-10-13 03:10:09] ID="centos"
[2025-10-13 03:10:09] ID_LIKE="rhel fedora"
[2025-10-13 03:10:09] VERSION_ID="7"
[2025-10-13 03:10:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 03:10:09] ANSI_COLOR="0;31"
[2025-10-13 03:10:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 03:10:09] HOME_URL="https://www.centos.org/"
[2025-10-13 03:10:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 03:10:09] 
[2025-10-13 03:10:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 03:10:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 03:10:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 03:10:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 03:10:09] 
[2025-10-13 03:10:09] 2025-10-13 07:09:05,428 | INFO     | ***************************************
[2025-10-13 03:10:09] 2025-10-13 07:09:05,931 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 03:10:09] 2025-10-13 07:09:05,980 | INFO     | sufficient remaining disk space (18580766720 B)
[2025-10-13 03:10:09] 2025-10-13 07:09:05,980 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 03:10:09] 2025-10-13 07:09:05,981 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 03:10:09] 2025-10-13 07:09:05,981 | INFO     | update_server=False
[2025-10-13 03:10:09] 2025-10-13 07:09:05,981 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 03:10:09] 2025-10-13 07:09:05,981 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 03:10:09] 2025-10-13 07:09:05,982 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 03:10:09] 2025-10-13 07:09:06,218 | INFO     | all data control threads have been joined
[2025-10-13 03:10:09] 2025-10-13 07:09:06,288 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 03:10:09] 2025-10-13 07:09:06,289 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 03:10:09] 2025-10-13 07:09:06,289 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 03:10:09] 2025-10-13 07:09:06,289 | INFO     | will abort loop
[2025-10-13 03:10:09] 2025-10-13 07:09:06,805 | INFO     | all payload control threads have been joined
[2025-10-13 03:10:09] 2025-10-13 07:09:06,984 | INFO     | [job] retrieve thread has finished
[2025-10-13 03:10:09] 2025-10-13 07:09:06,988 | INFO     | [job] queue monitor thread has finished
[2025-10-13 03:10:09] 2025-10-13 07:09:07,065 | INFO     | [job] validate thread has finished
[2025-10-13 03:10:09] 2025-10-13 07:09:07,215 | INFO     | all job control threads have been joined
[2025-10-13 03:10:09] 2025-10-13 07:09:07,220 | INFO     | [data] control thread has finished
[2025-10-13 03:10:09] 2025-10-13 07:09:07,295 | INFO     | [job] job monitor thread has finished
[2025-10-13 03:10:09] 2025-10-13 07:09:07,329 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 03:10:09] 2025-10-13 07:09:07,353 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 03:10:09] 2025-10-13 07:09:07,738 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 03:10:09] 2025-10-13 07:09:07,811 | INFO     | [payload] control thread has finished
[2025-10-13 03:10:09] 2025-10-13 07:09:07,910 | INFO     | [payload] failed_post thread has finished
[2025-10-13 03:10:09] 2025-10-13 07:09:07,987 | INFO     | [data] copytool_out thread has finished
[2025-10-13 03:10:09] 2025-10-13 07:09:08,218 | INFO     | [job] control thread has finished
[2025-10-13 03:10:09] 2025-10-13 07:09:08,261 | INFO     | [data] copytool_in thread has finished
[2025-10-13 03:10:09] 2025-10-13 07:09:08,299 | INFO     | [payload] validate_post thread has finished
[2025-10-13 03:10:09] 2025-10-13 07:09:08,399 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 03:10:09] 2025-10-13 07:09:09,252 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 03:10:09] 2025-10-13 07:09:13,258 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 03:10:09] 2025-10-13 07:09:36,807 | INFO     | PID=22300 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-13 03:10:09] 2025-10-13 07:09:36,807 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 03:10:09] 2025-10-13 07:09:36,807 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 03:10:09] 2025-10-13 07:09:36,808 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 03:10:09] 2025-10-13 07:10:02,540 | INFO     | [monitor] cgroup control has ended
[2025-10-13 03:10:09] 2025-10-13 07:10:03,707 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140355379410752)>', '<ExcThread(monitor, started 140354363848448)>']
[2025-10-13 03:10:09] 2025-10-13 07:10:03,942 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 03:10:09] 2025-10-13 07:10:03,943 | INFO     | [monitor] control thread has ended
[2025-10-13 03:10:09] 2025-10-13 07:10:08,732 | INFO     | all workflow threads have been joined
[2025-10-13 03:10:09] 2025-10-13 07:10:08,732 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 03:10:09] 2025-10-13 07:10:08,733 | INFO     | traces error code: 0
[2025-10-13 03:10:09] 2025-10-13 07:10:08,733 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 03:10:09] 2025-10-13 07:10:08,839 [wrapper] ==== pilot stdout END ====
[2025-10-13 03:10:09] 2025-10-13 07:10:08,843 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 03:10:09] 2025-10-13 07:10:08,847 [wrapper] pilotpid: 22300
[2025-10-13 03:10:09] 2025-10-13 07:10:08,851 [wrapper] Pilot exit status: 0
[2025-10-13 03:10:09] 2025-10-13 07:10:08,868 [wrapper] pandaids: 6840850756
[2025-10-13 03:10:09] 2025-10-13 07:10:08,919 [wrapper] cleanup supervisor_pilot 13330 22301
[2025-10-13 03:10:09] 2025-10-13 07:10:08,924 [wrapper] Test setup, not cleaning
[2025-10-13 03:10:09] 2025-10-13 07:10:08,927 [wrapper] apfmon messages muted
[2025-10-13 03:10:09] 2025-10-13 07:10:08,932 [wrapper] ==== wrapper stdout END ====
[2025-10-13 03:10:09] 2025-10-13 07:10:08,936 [wrapper] ==== wrapper stderr END ====
[2025-10-13 03:10:09]  *** Error codes and diagnostics ***
[2025-10-13 03:10:09]     "exeErrorCode": 0,
[2025-10-13 03:10:09]     "exeErrorDiag": "",
[2025-10-13 03:10:09]     "pilotErrorCode": 0,
[2025-10-13 03:10:09]     "pilotErrorDiag": "",
[2025-10-13 03:10:09]  *** Listing of results directory ***
[2025-10-13 03:10:09] total 419296
[2025-10-13 03:10:09] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 17:57 pilot3.tar.gz
[2025-10-13 03:10:09] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 18:06 queuedata.json
[2025-10-13 03:10:09] -rwx------ 1 boincer umatlas     36292 Oct 12 18:08 runpilot2-wrapper.sh
[2025-10-13 03:10:09] -rw-r--r-- 1 boincer umatlas       100 Oct 13 00:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 03:10:09] -rwxr-xr-x 1 boincer umatlas      7986 Oct 13 00:57 run_atlas
[2025-10-13 03:10:09] -rw-r--r-- 1 boincer umatlas       105 Oct 13 00:57 job.xml
[2025-10-13 03:10:09] -rw-r--r-- 2 boincer umatlas 223297019 Oct 13 00:57 EVNT.46676267._004296.pool.root.1
[2025-10-13 03:10:09] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 00:57 start_atlas.sh
[2025-10-13 03:10:09] drwxrwx--x 2 boincer umatlas      4096 Oct 13 00:57 shared
[2025-10-13 03:10:09] -rw-r--r-- 2 boincer umatlas    569678 Oct 13 00:57 input.tar.gz
[2025-10-13 03:10:09] -rw-r--r-- 1 boincer umatlas         0 Oct 13 00:57 boinc_lockfile
[2025-10-13 03:10:09] -rw-r--r-- 1 boincer umatlas      2549 Oct 13 00:57 pandaJob.out
[2025-10-13 03:10:09] -rw------- 1 boincer umatlas    974365 Oct 13 00:57 agis_schedconf.cvmfs.json
[2025-10-13 03:10:09] -rw------- 1 boincer umatlas   1560580 Oct 13 00:57 agis_ddmendpoints.agis.ALL.json
[2025-10-13 03:10:09] drwx------ 5 boincer umatlas      4096 Oct 13 00:57 pilot3
[2025-10-13 03:10:09] -rw------- 1 boincer umatlas 199236573 Oct 13 03:08 HITS.46676269._090704.pool.root.1
[2025-10-13 03:10:09] -rw-r--r-- 1 boincer umatlas       529 Oct 13 03:08 boinc_task_state.xml
[2025-10-13 03:10:09] -rw------- 1 boincer umatlas        95 Oct 13 03:08 pilot_heartbeat.json
[2025-10-13 03:10:09] -rw------- 1 boincer umatlas      1050 Oct 13 03:08 memory_monitor_summary.json
[2025-10-13 03:10:09] -rw------- 1 boincer umatlas    356983 Oct 13 03:08 log.46676269._090704.job.log.tgz.1
[2025-10-13 03:10:09] -rw------- 1 boincer umatlas      7843 Oct 13 03:09 heartbeat.json
[2025-10-13 03:10:09] -rw-r--r-- 1 boincer umatlas      5909 Oct 13 03:09 init_data.xml
[2025-10-13 03:10:09] -rw-r--r-- 1 boincer umatlas      8192 Oct 13 03:10 boinc_mmap_file
[2025-10-13 03:10:09] -rw-r--r-- 1 boincer umatlas        27 Oct 13 03:10 wrapper_checkpoint.txt
[2025-10-13 03:10:09] -rw------- 1 boincer umatlas      4932 Oct 13 03:10 pilotlog.txt
[2025-10-13 03:10:09] -rw------- 1 boincer umatlas   1104785 Oct 13 03:10 log.46676269._090704.job.log.1
[2025-10-13 03:10:09] -rw------- 1 boincer umatlas       357 Oct 13 03:10 output.list
[2025-10-13 03:10:09] -rw-r--r-- 1 boincer umatlas       620 Oct 13 03:10 runtime_log
[2025-10-13 03:10:09] -rw------- 1 boincer umatlas   1484800 Oct 13 03:10 result.tar.gz
[2025-10-13 03:10:09] -rw-r--r-- 1 boincer umatlas      8698 Oct 13 03:10 runtime_log.err
[2025-10-13 03:10:09] -rw------- 1 boincer umatlas       659 Oct 13 03:10 1MtMDmdPJS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmi8UMDmgrbqum.diag
[2025-10-13 03:10:09] -rw-r--r-- 1 boincer umatlas     20887 Oct 13 03:10 stderr.txt
[2025-10-13 03:10:09] HITS file was successfully produced:
[2025-10-13 03:10:09] -rw------- 1 boincer umatlas 199236573 Oct 13 03:08 shared/HITS.pool.root.1
[2025-10-13 03:10:09]  *** Contents of shared directory: ***
[2025-10-13 03:10:09] total 414664
[2025-10-13 03:10:09] -rw-r--r-- 2 boincer umatlas 223297019 Oct 13 00:57 ATLAS.root_0
[2025-10-13 03:10:09] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 00:57 start_atlas.sh
[2025-10-13 03:10:09] -rw-r--r-- 2 boincer umatlas    569678 Oct 13 00:57 input.tar.gz
[2025-10-13 03:10:09] -rw------- 1 boincer umatlas 199236573 Oct 13 03:08 HITS.pool.root.1
[2025-10-13 03:10:09] -rw------- 1 boincer umatlas   1484800 Oct 13 03:10 result.tar.gz
03:10:10 (18615): run_atlas exited; CPU time 57888.941761
03:10:10 (18615): called boinc_finish(0)

</stderr_txt>
]]>

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