Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:32:45 (3744): wrapper (7.7.26015): starting
15:32:45 (3744): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 15:32:45] Arguments: --nthreads 8
[2025-10-13 15:32:45] Threads: 8
[2025-10-13 15:32:45] Checking for CVMFS
[2025-10-13 15:32:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 15:32:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 15:32:47] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 15:32:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 15:32:48] 2.11.2.0 23762 222094 139384 151662 0 156 16852375 25165824 4636 130560 0 112052461 99.873 72476484 3528 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-13 15:32:48] CVMFS is ok
[2025-10-13 15:32:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 15:32:48] Checking for apptainer binary...
[2025-10-13 15:32:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 15:32:48] Running /usr/bin/apptainer --version
[2025-10-13 15:32:48] apptainer version 1.3.2-1.el7
[2025-10-13 15:32:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 15:32:51] cg-vwn242.simple-grid.lan
[2025-10-13 15:32:51] apptainer works
[2025-10-13 15:32:51] Set ATHENA_PROC_NUMBER=8
[2025-10-13 15:32:51] Set ATHENA_CORE_NUMBER=8
[2025-10-13 15:32:51] Starting ATLAS job with PandaID=6840850866
[2025-10-13 15:32:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 19:41:57]  *** The last 200 lines of the pilot log: ***
[2025-10-13 19:41:57] 2025-10-13 17:40:50,131 | INFO     | fitting pss+swap vs Time
[2025-10-13 19:41:57] 2025-10-13 17:40:50,132 | INFO     | sum of square deviations: 4340323240.0
[2025-10-13 19:41:57] 2025-10-13 17:40:50,138 | INFO     | sum of deviations: -12916410535.0
[2025-10-13 19:41:57] 2025-10-13 17:40:50,139 | INFO     | mean x: 1760369769.0
[2025-10-13 19:41:57] 2025-10-13 17:40:50,139 | INFO     | mean y: 2489403.5145228216
[2025-10-13 19:41:57] 2025-10-13 17:40:50,139 | INFO     | -- intersect: 5241191079.062336
[2025-10-13 19:41:57] 2025-10-13 17:40:50,139 | INFO     | intersect: 5241191079.062336
[2025-10-13 19:41:57] 2025-10-13 17:40:50,139 | INFO     | chi2: 2.441864670845917
[2025-10-13 19:41:57] 2025-10-13 17:40:50,140 | INFO     | sum of square deviations: 4075741535.0
[2025-10-13 19:41:57] 2025-10-13 17:40:50,142 | INFO     | sum of deviations: 3077427247.0000057
[2025-10-13 19:41:57] 2025-10-13 17:40:50,142 | INFO     | mean x: 1760369616.5
[2025-10-13 19:41:57] 2025-10-13 17:40:50,142 | INFO     | mean y: 2498467.2881355933
[2025-10-13 19:41:57] 2025-10-13 17:40:50,143 | INFO     | -- intersect: -1326685283.9597342
[2025-10-13 19:41:57] 2025-10-13 17:40:50,143 | INFO     | intersect: -1326685283.9597342
[2025-10-13 19:41:57] 2025-10-13 17:40:50,143 | INFO     | chi2: 1.6702999209406786
[2025-10-13 19:41:57] 2025-10-13 17:40:50,143 | INFO     | current chi2=1.6702999209406786 (change=31.59735914594935 %)
[2025-10-13 19:41:57] 2025-10-13 17:40:50,144 | INFO     | sum of square deviations: 3822136780.0
[2025-10-13 19:41:57] 2025-10-13 17:40:50,146 | INFO     | sum of deviations: 2829247161.0
[2025-10-13 19:41:57] 2025-10-13 17:40:50,146 | INFO     | mean x: 1760369464.0
[2025-10-13 19:41:57] 2025-10-13 17:40:50,146 | INFO     | mean y: 2498318.0303030303
[2025-10-13 19:41:57] 2025-10-13 17:40:50,146 | INFO     | -- intersect: -1300573914.8616586
[2025-10-13 19:41:57] 2025-10-13 17:40:50,146 | INFO     | intersect: -1300573914.8616586
[2025-10-13 19:41:57] 2025-10-13 17:40:50,147 | INFO     | chi2: 1.6702083580819813
[2025-10-13 19:41:57] 2025-10-13 17:40:50,147 | INFO     | current chi2=1.6702083580819813 (change=0.005481821411193214 %)
[2025-10-13 19:41:57] 2025-10-13 17:40:50,147 | INFO     | right removable region: 230
[2025-10-13 19:41:57] 2025-10-13 17:40:50,147 | INFO     | sum of square deviations: 4075741535.0
[2025-10-13 19:41:57] 2025-10-13 17:40:50,150 | INFO     | sum of deviations: -50231237875.99999
[2025-10-13 19:41:57] 2025-10-13 17:40:50,150 | INFO     | mean x: 1760369921.5
[2025-10-13 19:41:57] 2025-10-13 17:40:50,150 | INFO     | mean y: 2510717.966101695
[2025-10-13 19:41:57] 2025-10-13 17:40:50,150 | INFO     | -- intersect: 21698086729.662815
[2025-10-13 19:41:57] 2025-10-13 17:40:50,150 | INFO     | intersect: 21698086729.662815
[2025-10-13 19:41:57] 2025-10-13 17:40:50,151 | INFO     | chi2: 0.976166581165693
[2025-10-13 19:41:57] 2025-10-13 17:40:50,151 | INFO     | current chi2=0.976166581165693 (change=60.02372314811668 %)
[2025-10-13 19:41:57] 2025-10-13 17:40:50,151 | INFO     | sum of square deviations: 3822136780.0
[2025-10-13 19:41:57] 2025-10-13 17:40:50,153 | INFO     | sum of deviations: -45505287520.0
[2025-10-13 19:41:57] 2025-10-13 17:40:50,153 | INFO     | mean x: 1760370074.0
[2025-10-13 19:41:57] 2025-10-13 17:40:50,154 | INFO     | mean y: 2507852.909090909
[2025-10-13 19:41:57] 2025-10-13 17:40:50,154 | INFO     | -- intersect: 20960979767.92352
[2025-10-13 19:41:57] 2025-10-13 17:40:50,154 | INFO     | intersect: 20960979767.92352
[2025-10-13 19:41:57] 2025-10-13 17:40:50,154 | INFO     | chi2: 0.9634902554276477
[2025-10-13 19:41:57] 2025-10-13 17:40:50,154 | INFO     | current chi2=0.9634902554276477 (change=1.298582227933664 %)
[2025-10-13 19:41:57] 2025-10-13 17:40:50,154 | INFO     | left removable region: 20
[2025-10-13 19:41:57] 2025-10-13 17:40:50,155 | INFO     | sum of square deviations: 2871616632.5
[2025-10-13 19:41:57] 2025-10-13 17:40:50,157 | INFO     | sum of deviations: -13823955084.499989
[2025-10-13 19:41:57] 2025-10-13 17:40:50,157 | INFO     | mean x: 1760370043.5
[2025-10-13 19:41:57] 2025-10-13 17:40:50,157 | INFO     | mean y: 2507275.7952380953
[2025-10-13 19:41:57] 2025-10-13 17:40:50,157 | INFO     | -- intersect: 8476924138.41706
[2025-10-13 19:41:57] 2025-10-13 17:40:50,157 | INFO     | intersect: 8476924138.41706
[2025-10-13 19:41:57] 2025-10-13 17:40:50,158 | INFO     | chi2: 0.1175173140859912
[2025-10-13 19:41:57] 2025-10-13 17:40:50,158 | INFO     | -- intersect: 8476924138.41706
[2025-10-13 19:41:57] 2025-10-13 17:40:50,158 | INFO     | current memory leak: -4.81 B/s (using 210 data points, chi2=0.12)
[2025-10-13 19:41:57] 2025-10-13 17:40:50,159 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2025-10-13 19:41:57] 2025-10-13 17:40:50,159 | INFO     | ..............................
[2025-10-13 19:41:57] 2025-10-13 17:40:50,159 | INFO     | . Timing measurements:
[2025-10-13 19:41:57] 2025-10-13 17:40:50,159 | INFO     | . get job = 0 s
[2025-10-13 19:41:57] 2025-10-13 17:40:50,159 | INFO     | . initial setup = 2 s
[2025-10-13 19:41:57] 2025-10-13 17:40:50,160 | INFO     | . payload setup = 9 s
[2025-10-13 19:41:57] 2025-10-13 17:40:50,160 | INFO     | . stage-in = 0 s
[2025-10-13 19:41:57] 2025-10-13 17:40:50,160 | INFO     | . payload execution = 14713 s
[2025-10-13 19:41:57] 2025-10-13 17:40:50,160 | INFO     | . stage-out = 4 s
[2025-10-13 19:41:57] 2025-10-13 17:40:50,160 | INFO     | . log creation = 1 s
[2025-10-13 19:41:57] 2025-10-13 17:40:50,160 | INFO     | ..............................
[2025-10-13 19:41:57] 2025-10-13 17:40:50,318 | INFO     | 
[2025-10-13 19:41:57] 2025-10-13 17:40:50,318 | INFO     | job summary report
[2025-10-13 19:41:57] 2025-10-13 17:40:50,319 | INFO     | --------------------------------------------------
[2025-10-13 19:41:57] 2025-10-13 17:40:50,319 | INFO     | PanDA job id: 6840850866
[2025-10-13 19:41:57] 2025-10-13 17:40:50,319 | INFO     | task id: 46676269
[2025-10-13 19:41:57] 2025-10-13 17:40:50,319 | INFO     | errors: (none)
[2025-10-13 19:41:57] 2025-10-13 17:40:50,319 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 19:41:57] 2025-10-13 17:40:50,319 | INFO     | pilot state: finished 
[2025-10-13 19:41:57] 2025-10-13 17:40:50,319 | INFO     | transexitcode: 0
[2025-10-13 19:41:57] 2025-10-13 17:40:50,319 | INFO     | exeerrorcode: 0
[2025-10-13 19:41:57] 2025-10-13 17:40:50,319 | INFO     | exeerrordiag: 
[2025-10-13 19:41:57] 2025-10-13 17:40:50,320 | INFO     | exitcode: 0
[2025-10-13 19:41:57] 2025-10-13 17:40:50,320 | INFO     | exitmsg: OK
[2025-10-13 19:41:57] 2025-10-13 17:40:50,320 | INFO     | cpuconsumptiontime: 57010 s
[2025-10-13 19:41:57] 2025-10-13 17:40:50,320 | INFO     | nevents: 400
[2025-10-13 19:41:57] 2025-10-13 17:40:50,320 | INFO     | neventsw: 0
[2025-10-13 19:41:57] 2025-10-13 17:40:50,320 | INFO     | pid: 14067
[2025-10-13 19:41:57] 2025-10-13 17:40:50,320 | INFO     | pgrp: 14067
[2025-10-13 19:41:57] 2025-10-13 17:40:50,320 | INFO     | corecount: 8
[2025-10-13 19:41:57] 2025-10-13 17:40:50,320 | INFO     | event service: False
[2025-10-13 19:41:57] 2025-10-13 17:40:50,320 | INFO     | sizes: {0: 2348686, 1: 2348885, 11: 2349147, 12: 2349175, 14727: 2379491, 14732: 2388673, 14830: 2388811}
[2025-10-13 19:41:57] 2025-10-13 17:40:50,321 | INFO     | --------------------------------------------------
[2025-10-13 19:41:57] 2025-10-13 17:40:50,321 | INFO     | 
[2025-10-13 19:41:57] 2025-10-13 17:40:50,321 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2025-10-13 19:41:57] 2025-10-13 17:40:50,808 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 19:41:57] 2025-10-13 17:40:50,808 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 19:41:57] 2025-10-13 17:40:50,808 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 19:41:57] 2025-10-13 17:40:50,808 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 19:41:57] 2025-10-13 17:40:50,808 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 19:41:57] 2025-10-13 17:40:50,808 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 19:41:57] 2025-10-13 17:40:50,809 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 19:41:57] 2025-10-13 17:40:50,809 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 19:41:57] 2025-10-13 17:40:50,809 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 19:41:57] 2025-10-13 17:40:50,809 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 19:41:57] 2025-10-13 17:40:50,809 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 19:41:57] 2025-10-13 17:40:50,809 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 19:41:57] 2025-10-13 17:40:50,809 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 19:41:57] 2025-10-13 17:40:50,809 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 19:41:57] 2025-10-13 17:40:50,810 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 19:41:57] 2025-10-13 17:40:50,810 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 19:41:57] 2025-10-13 17:40:50,810 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 19:41:57] 2025-10-13 17:40:50,810 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 19:41:57] 2025-10-13 17:40:50,810 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 19:41:57] 2025-10-13 17:40:50,810 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 19:41:57] 2025-10-13 17:40:50,810 | INFO     | job 6840850866 has completed (purged errors)
[2025-10-13 19:41:57] 2025-10-13 17:40:50,810 | INFO     | overall cleanup function is called
[2025-10-13 19:41:57] 2025-10-13 17:40:51,820 | INFO     | --- collectZombieJob: --- 10, [14067]
[2025-10-13 19:41:57] 2025-10-13 17:40:51,820 | INFO     | zombie collector waiting for pid 14067
[2025-10-13 19:41:57] 2025-10-13 17:40:51,820 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 19:41:57] 2025-10-13 17:40:51,821 | INFO     | collected zombie processes
[2025-10-13 19:41:57] 2025-10-13 17:40:51,821 | INFO     | will attempt to kill all subprocesses of pid=14067
[2025-10-13 19:41:57] 2025-10-13 17:40:51,944 | INFO     | process IDs to be killed: [14067] (in reverse order)
[2025-10-13 19:41:57] 2025-10-13 17:40:52,799 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 19:41:57] 2025-10-13 17:40:52,799 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 19:41:57] 2025-10-13 17:40:52,802 | INFO     | did not find any defunct processes belonging to 14067
[2025-10-13 19:41:57] 2025-10-13 17:40:52,805 | INFO     | did not find any defunct processes belonging to 14067
[2025-10-13 19:41:57] 2025-10-13 17:40:52,806 | INFO     | ready for new job
[2025-10-13 19:41:57] 2025-10-13 17:40:52,806 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 19:41:57] 2025-10-13 17:40:52,808 | INFO     | ***************************************
[2025-10-13 19:41:57] 2025-10-13 17:40:52,808 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 19:41:57] 2025-10-13 17:40:52,808 | INFO     | ***************************************
[2025-10-13 19:41:57] 2025-10-13 17:40:52,808 | INFO     | 
[2025-10-13 19:41:57] 2025-10-13 17:40:52,809 | INFO     | pilot is running in a VM
[2025-10-13 19:41:57] 2025-10-13 17:40:52,809 | INFO     | architecture information:
[2025-10-13 19:41:57] 2025-10-13 17:40:52,816 | INFO     | executing command: cat /etc/os-release
[2025-10-13 19:41:57] 2025-10-13 17:40:52,979 | INFO     | cat /etc/os-release:
[2025-10-13 19:41:57] NAME="CentOS Linux"
[2025-10-13 19:41:57] VERSION="7 (Core)"
[2025-10-13 19:41:57] ID="centos"
[2025-10-13 19:41:57] ID_LIKE="rhel fedora"
[2025-10-13 19:41:57] VERSION_ID="7"
[2025-10-13 19:41:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 19:41:57] ANSI_COLOR="0;31"
[2025-10-13 19:41:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 19:41:57] HOME_URL="https://www.centos.org/"
[2025-10-13 19:41:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 19:41:57] 
[2025-10-13 19:41:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 19:41:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 19:41:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 19:41:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 19:41:57] 
[2025-10-13 19:41:57] 2025-10-13 17:40:52,979 | INFO     | ***************************************
[2025-10-13 19:41:57] 2025-10-13 17:40:53,482 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2025-10-13 19:41:57] 2025-10-13 17:40:53,656 | INFO     | sufficient remaining disk space (496404267008 B)
[2025-10-13 19:41:57] 2025-10-13 17:40:53,656 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 19:41:57] 2025-10-13 17:40:53,656 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 19:41:57] 2025-10-13 17:40:53,656 | INFO     | update_server=False
[2025-10-13 19:41:57] 2025-10-13 17:40:53,656 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 19:41:57] 2025-10-13 17:40:53,657 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 19:41:57] 2025-10-13 17:40:53,657 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 19:41:57] 2025-10-13 17:40:53,677 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 19:41:57] 2025-10-13 17:40:53,677 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 19:41:57] 2025-10-13 17:40:53,678 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 19:41:57] 2025-10-13 17:40:53,678 | INFO     | will abort loop
[2025-10-13 19:41:57] 2025-10-13 17:40:53,736 | INFO     | all payload control threads have been joined
[2025-10-13 19:41:57] 2025-10-13 17:40:54,019 | INFO     | all data control threads have been joined
[2025-10-13 19:41:57] 2025-10-13 17:40:54,529 | INFO     | all job control threads have been joined
[2025-10-13 19:41:57] 2025-10-13 17:40:54,662 | INFO     | [job] retrieve thread has finished
[2025-10-13 19:41:57] 2025-10-13 17:40:54,683 | INFO     | [job] job monitor thread has finished
[2025-10-13 19:41:57] 2025-10-13 17:40:54,727 | INFO     | [payload] validate_post thread has finished
[2025-10-13 19:41:57] 2025-10-13 17:40:54,742 | INFO     | [payload] control thread has finished
[2025-10-13 19:41:57] 2025-10-13 17:40:55,025 | INFO     | [data] control thread has finished
[2025-10-13 19:41:57] 2025-10-13 17:40:55,244 | INFO     | [data] copytool_in thread has finished
[2025-10-13 19:41:57] 2025-10-13 17:40:55,297 | INFO     | [job] validate thread has finished
[2025-10-13 19:41:57] 2025-10-13 17:40:55,323 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 19:41:57] 2025-10-13 17:40:55,367 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 19:41:57] 2025-10-13 17:40:55,413 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 19:41:57] 2025-10-13 17:40:55,438 | INFO     | [payload] failed_post thread has finished
[2025-10-13 19:41:57] 2025-10-13 17:40:55,535 | INFO     | [job] control thread has finished
[2025-10-13 19:41:57] 2025-10-13 17:40:55,664 | INFO     | [data] copytool_out thread has finished
[2025-10-13 19:41:57] 2025-10-13 17:40:55,932 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 19:41:57] 2025-10-13 17:40:56,006 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 19:41:57] 2025-10-13 17:40:56,329 | INFO     | [job] queue monitor thread has finished
[2025-10-13 19:41:57] 2025-10-13 17:40:57,668 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 19:41:57] 2025-10-13 17:41:22,221 | INFO     | PID=7575 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-13 19:41:57] 2025-10-13 17:41:22,221 | INFO     | .. there are 9 such processes running
[2025-10-13 19:41:57] 2025-10-13 17:41:22,222 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 19:41:57] 2025-10-13 17:41:22,222 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 19:41:57] 2025-10-13 17:41:22,222 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 19:41:57] 2025-10-13 17:41:47,556 | INFO     | [monitor] cgroup control has ended
[2025-10-13 19:41:57] 2025-10-13 17:41:47,682 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139854631442240)>', '<ExcThread(monitor, started 139854033696512)>']
[2025-10-13 19:41:57] 2025-10-13 17:41:48,376 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 19:41:57] 2025-10-13 17:41:48,376 | INFO     | [monitor] control thread has ended
[2025-10-13 19:41:57] 2025-10-13 17:41:52,708 | INFO     | all workflow threads have been joined
[2025-10-13 19:41:57] 2025-10-13 17:41:52,708 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 19:41:57] 2025-10-13 17:41:52,709 | INFO     | traces error code: 0
[2025-10-13 19:41:57] 2025-10-13 17:41:52,709 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 19:41:57] 2025-10-13 17:41:52,961 [wrapper] ==== pilot stdout END ====
[2025-10-13 19:41:57] 2025-10-13 17:41:53,022 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 19:41:57] 2025-10-13 17:41:53,075 [wrapper] pilotpid: 7575
[2025-10-13 19:41:57] 2025-10-13 17:41:53,131 [wrapper] Pilot exit status: 0
[2025-10-13 19:41:57] 2025-10-13 17:41:53,355 [wrapper] pandaids: 6840850866
[2025-10-13 19:41:57] 2025-10-13 17:41:54,205 [wrapper] cleanup supervisor_pilot 23723 7576
[2025-10-13 19:41:57] 2025-10-13 17:41:54,285 [wrapper] Test setup, not cleaning
[2025-10-13 19:41:57] 2025-10-13 17:41:54,342 [wrapper] apfmon messages muted
[2025-10-13 19:41:57] 2025-10-13 17:41:54,417 [wrapper] ==== wrapper stdout END ====
[2025-10-13 19:41:57] 2025-10-13 17:41:54,503 [wrapper] ==== wrapper stderr END ====
[2025-10-13 19:41:57]  *** Error codes and diagnostics ***
[2025-10-13 19:41:57]     "exeErrorCode": 0,
[2025-10-13 19:41:57]     "exeErrorDiag": "",
[2025-10-13 19:41:57]     "pilotErrorCode": 0,
[2025-10-13 19:41:57]     "pilotErrorDiag": "",
[2025-10-13 19:41:57]  *** Listing of results directory ***
[2025-10-13 19:41:57] total 417252
[2025-10-13 19:41:57] -rw-r--r--. 1 boinc boinc    557409 Oct 12 23:57 pilot3.tar.gz
[2025-10-13 19:41:57] -rw-r--r--. 1 boinc boinc      5112 Oct 13 00:09 queuedata.json
[2025-10-13 19:41:57] -rwx------. 1 boinc boinc     36292 Oct 13 00:10 runpilot2-wrapper.sh
[2025-10-13 19:41:57] -rw-r--r--. 1 boinc boinc       100 Oct 13 15:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 19:41:57] -rwxr-xr-x. 1 boinc boinc      7986 Oct 13 15:32 run_atlas
[2025-10-13 19:41:57] -rw-r--r--. 1 boinc boinc       105 Oct 13 15:32 job.xml
[2025-10-13 19:41:57] -rw-r--r--. 1 boinc boinc      6391 Oct 13 15:32 init_data.xml
[2025-10-13 19:41:57] -rw-r--r--. 2 boinc boinc 222491257 Oct 13 15:32 EVNT.46676267._004335.pool.root.1
[2025-10-13 19:41:57] -rw-r--r--. 2 boinc boinc     15120 Oct 13 15:32 start_atlas.sh
[2025-10-13 19:41:57] drwxrwx--x. 2 boinc boinc        68 Oct 13 15:32 shared
[2025-10-13 19:41:57] -rw-r--r--. 2 boinc boinc    569680 Oct 13 15:32 input.tar.gz
[2025-10-13 19:41:57] -rw-r--r--. 1 boinc boinc         0 Oct 13 15:32 boinc_lockfile
[2025-10-13 19:41:57] -rw-r--r--. 1 boinc boinc      2550 Oct 13 15:32 pandaJob.out
[2025-10-13 19:41:57] -rw-------. 1 boinc boinc    972489 Oct 13 15:33 agis_schedconf.cvmfs.json
[2025-10-13 19:41:57] drwx------. 5 boinc boinc      4096 Oct 13 15:33 pilot3
[2025-10-13 19:41:57] -rw-------. 1 boinc boinc 195972409 Oct 13 19:37 HITS.46676269._090814.pool.root.1
[2025-10-13 19:41:57] -rw-r--r--. 1 boinc boinc       530 Oct 13 19:38 boinc_task_state.xml
[2025-10-13 19:41:57] -rw-------. 1 boinc boinc      1017 Oct 13 19:39 memory_monitor_summary.json
[2025-10-13 19:41:57] -rw-------. 1 boinc boinc   1560580 Oct 13 19:39 agis_ddmendpoints.agis.ALL.json
[2025-10-13 19:41:57] -rw-------. 1 boinc boinc    461931 Oct 13 19:39 log.46676269._090814.job.log.tgz.1
[2025-10-13 19:41:57] -rw-------. 1 boinc boinc        95 Oct 13 19:40 pilot_heartbeat.json
[2025-10-13 19:41:57] -rw-------. 1 boinc boinc      7771 Oct 13 19:40 heartbeat.json
[2025-10-13 19:41:57] -rw-r--r--. 1 boinc boinc      8192 Oct 13 19:41 boinc_mmap_file
[2025-10-13 19:41:57] -rw-r--r--. 1 boinc boinc        28 Oct 13 19:41 wrapper_checkpoint.txt
[2025-10-13 19:41:57] -rw-------. 1 boinc boinc      5069 Oct 13 19:41 pilotlog.txt
[2025-10-13 19:41:57] -rw-------. 1 boinc boinc   1995416 Oct 13 19:41 log.46676269._090814.job.log.1
[2025-10-13 19:41:57] -rw-------. 1 boinc boinc       357 Oct 13 19:41 output.list
[2025-10-13 19:41:57] -rw-r--r--. 1 boinc boinc       620 Oct 13 19:41 runtime_log
[2025-10-13 19:41:57] -rw-------. 1 boinc boinc   2478080 Oct 13 19:41 result.tar.gz
[2025-10-13 19:41:57] -rw-r--r--. 1 boinc boinc      8703 Oct 13 19:41 runtime_log.err
[2025-10-13 19:41:57] -rw-------. 1 boinc boinc       656 Oct 13 19:41 0gNLDmbRJS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmtolNDmvcaGLm.diag
[2025-10-13 19:41:57] -rw-r--r--. 1 boinc boinc     20571 Oct 13 19:41 stderr.txt
[2025-10-13 19:41:57] HITS file was successfully produced:
[2025-10-13 19:41:57] -rw-------. 1 boinc boinc 195972409 Oct 13 19:37 shared/HITS.pool.root.1
[2025-10-13 19:41:57]  *** Contents of shared directory: ***
[2025-10-13 19:41:57] total 411656
[2025-10-13 19:41:57] -rw-r--r--. 2 boinc boinc 222491257 Oct 13 15:32 ATLAS.root_0
[2025-10-13 19:41:57] -rw-r--r--. 2 boinc boinc     15120 Oct 13 15:32 start_atlas.sh
[2025-10-13 19:41:57] -rw-r--r--. 2 boinc boinc    569680 Oct 13 15:32 input.tar.gz
[2025-10-13 19:41:57] -rw-------. 1 boinc boinc 195972409 Oct 13 19:37 HITS.pool.root.1
[2025-10-13 19:41:57] -rw-------. 1 boinc boinc   2478080 Oct 13 19:41 result.tar.gz
19:41:58 (3744): run_atlas exited; CPU time 57200.712998
19:41:58 (3744): called boinc_finish(0)

</stderr_txt>
]]>

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