Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
00:44:36 (3886): wrapper (7.7.26015): starting
00:44:36 (3886): wrapper: running run_atlas (--nthreads 12)
[2025-10-13 00:44:36] Arguments: --nthreads 12
[2025-10-13 00:44:36] Threads: 12
[2025-10-13 00:44:36] Checking for CVMFS
[2025-10-13 00:44:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 00:44:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 00:44:36] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 00:44:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 00:44:36] 2.11.2.0 2925 223858 99868 151649 3 59 12174281 20275201 1 130560 1 109243112 99.985 12926239 12195 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 00:44:36] CVMFS is ok
[2025-10-13 00:44:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 00:44:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 00:44:36] Further information can be found at the LHC@home message board.
[2025-10-13 00:44:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 00:44:36] Checking for apptainer binary...
[2025-10-13 00:44:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 00:44:36] Running /usr/bin/apptainer --version
[2025-10-13 00:44:36] apptainer version 1.3.2-1.el7
[2025-10-13 00:44:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 00:44:38] c-205-10.aglt2.org
[2025-10-13 00:44:38] apptainer works
[2025-10-13 00:44:38] Set ATHENA_PROC_NUMBER=12
[2025-10-13 00:44:38] Set ATHENA_CORE_NUMBER=12
[2025-10-13 00:44:38] Starting ATLAS job with PandaID=6841068821
[2025-10-13 00:44:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 01:59:06]  *** The last 200 lines of the pilot log: ***
[2025-10-13 01:59:06]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-13 01:59:06]  replicas=None
[2025-10-13 01:59:06]  scope=mc23_13p6TeV
[2025-10-13 01:59:06]  status=None
[2025-10-13 01:59:06]  status_code=0
[2025-10-13 01:59:06]  storage_token=
[2025-10-13 01:59:06]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6841068821/log.46676269._093057.job.log.tgz.1
[2025-10-13 01:59:06]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b3/31/log.46676269._093057.job.log.tgz.1
[2025-10-13 01:59:06]  workdir=None
[2025-10-13 01:59:06] ]
[2025-10-13 01:59:06] 2025-10-13 05:58:07,161 | INFO     | transferring file log.46676269._093057.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6841068821/log.46676269._093057.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-13 01:59:06] 2025-10-13 05:58:07,161 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6841068821/log.46676269._093057.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._093057.job
[2025-10-13 01:59:06] 2025-10-13 05:58:07,184 | INFO     | adding to output.list: log.46676269._093057.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b3/31/log.46676269._093057.job.log.tg
[2025-10-13 01:59:06] 2025-10-13 05:58:07,185 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 01:59:06] 2025-10-13 05:58:07,185 | INFO     | summary of transferred files:
[2025-10-13 01:59:06] 2025-10-13 05:58:07,185 | INFO     |  -- lfn=log.46676269._093057.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 01:59:06] 2025-10-13 05:58:07,186 | INFO     | stage-out finished correctly
[2025-10-13 01:59:06] 2025-10-13 05:58:08,179 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 01:59:06] 2025-10-13 05:58:08,179 | INFO     | monitor loop #330: job 0:6841068821 is in state 'finished'
[2025-10-13 01:59:06] 2025-10-13 05:58:08,196 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 01:59:06] 2025-10-13 05:58:08,273 | INFO     | job 6841068821 has state=finished
[2025-10-13 01:59:06] 2025-10-13 05:58:08,273 | INFO     | preparing for final server update for job 6841068821 in state='finished'
[2025-10-13 01:59:06] 2025-10-13 05:58:08,273 | INFO     | this job has now completed (state=finished)
[2025-10-13 01:59:06] 2025-10-13 05:58:08,274 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 01:59:06] 2025-10-13 05:58:08,274 | INFO     | log transfer has been attempted: DONE
[2025-10-13 01:59:06] 2025-10-13 05:58:08,274 | INFO     | job 6841068821 has finished - writing final server update
[2025-10-13 01:59:06] 2025-10-13 05:58:08,274 | INFO     | total number of processed events: 400 (read)
[2025-10-13 01:59:06] 2025-10-13 05:58:08,275 | INFO     | executing command: lscpu
[2025-10-13 01:59:06] 2025-10-13 05:58:08,299 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 01:59:06] 2025-10-13 05:58:08,682 | INFO     | time since job start (4395s) is within the limit (172800.0s)
[2025-10-13 01:59:06] 2025-10-13 05:58:10,688 | INFO     | time since job start (4397s) is within the limit (172800.0s)
[2025-10-13 01:59:06] 2025-10-13 05:58:10,704 | INFO     | monitor loop #331: job 0:6841068821 is in state 'finished'
[2025-10-13 01:59:06] 2025-10-13 05:58:10,704 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 01:59:06] 2025-10-13 05:58:12,694 | INFO     | time since job start (4399s) is within the limit (172800.0s)
[2025-10-13 01:59:06] 2025-10-13 05:58:13,207 | INFO     | monitor loop #332: job 0:6841068821 is in state 'finished'
[2025-10-13 01:59:06] 2025-10-13 05:58:13,211 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 01:59:06] 2025-10-13 05:58:14,166 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-13 01:59:06] 2025-10-13 05:58:14,168 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1673.5833333333333
[2025-10-13 01:59:06] 2025-10-13 05:58:14,170 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6841068821/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 01:59:06] 2025-10-13 05:58:14,171 | INFO     | extracted standard info from prmon json
[2025-10-13 01:59:06] 2025-10-13 05:58:14,171 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 01:59:06] 2025-10-13 05:58:14,171 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 01:59:06] 2025-10-13 05:58:14,171 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 01:59:06] 2025-10-13 05:58:14,171 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 01:59:06] 2025-10-13 05:58:14,173 | INFO     | fitting pss+swap vs Time
[2025-10-13 01:59:06] 2025-10-13 05:58:14,173 | INFO     | sum of square deviations: 85136480.0
[2025-10-13 01:59:06] 2025-10-13 05:58:14,173 | INFO     | sum of deviations: -5364854047.0
[2025-10-13 01:59:06] 2025-10-13 05:58:14,174 | INFO     | mean x: 1760332980.0
[2025-10-13 01:59:06] 2025-10-13 05:58:14,174 | INFO     | mean y: 2763864.184615385
[2025-10-13 01:59:06] 2025-10-13 05:58:14,174 | INFO     | -- intersect: 110929707423.7559
[2025-10-13 01:59:06] 2025-10-13 05:58:14,174 | INFO     | intersect: 110929707423.7559
[2025-10-13 01:59:06] 2025-10-13 05:58:14,174 | INFO     | chi2: 0.10690880583385336
[2025-10-13 01:59:06] 2025-10-13 05:58:14,174 | INFO     | -- intersect: 110929707423.7559
[2025-10-13 01:59:06] 2025-10-13 05:58:14,174 | INFO     | current memory leak: -63.01 B/s (using 65 data points, chi2=0.11)
[2025-10-13 01:59:06] 2025-10-13 05:58:14,175 | INFO     | could have reported an average CPU frequency of 2030 MHz (6 samples)
[2025-10-13 01:59:06] 2025-10-13 05:58:14,175 | INFO     | ..............................
[2025-10-13 01:59:06] 2025-10-13 05:58:14,175 | INFO     | . Timing measurements:
[2025-10-13 01:59:06] 2025-10-13 05:58:14,175 | INFO     | . get job = 0 s
[2025-10-13 01:59:06] 2025-10-13 05:58:14,175 | INFO     | . initial setup = 2 s
[2025-10-13 01:59:06] 2025-10-13 05:58:14,175 | INFO     | . payload setup = 7 s
[2025-10-13 01:59:06] 2025-10-13 05:58:14,175 | INFO     | . stage-in = 0 s
[2025-10-13 01:59:06] 2025-10-13 05:58:14,176 | INFO     | . payload execution = 4364 s
[2025-10-13 01:59:06] 2025-10-13 05:58:14,176 | INFO     | . stage-out = 0 s
[2025-10-13 01:59:06] 2025-10-13 05:58:14,176 | INFO     | . log creation = 0 s
[2025-10-13 01:59:06] 2025-10-13 05:58:14,176 | INFO     | ..............................
[2025-10-13 01:59:06] 2025-10-13 05:58:14,559 | INFO     | 
[2025-10-13 01:59:06] 2025-10-13 05:58:14,560 | INFO     | job summary report
[2025-10-13 01:59:06] 2025-10-13 05:58:14,560 | INFO     | --------------------------------------------------
[2025-10-13 01:59:06] 2025-10-13 05:58:14,560 | INFO     | PanDA job id: 6841068821
[2025-10-13 01:59:06] 2025-10-13 05:58:14,560 | INFO     | task id: 46676269
[2025-10-13 01:59:06] 2025-10-13 05:58:14,560 | INFO     | errors: (none)
[2025-10-13 01:59:06] 2025-10-13 05:58:14,560 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 01:59:06] 2025-10-13 05:58:14,561 | INFO     | pilot state: finished 
[2025-10-13 01:59:06] 2025-10-13 05:58:14,561 | INFO     | transexitcode: 0
[2025-10-13 01:59:06] 2025-10-13 05:58:14,561 | INFO     | exeerrorcode: 0
[2025-10-13 01:59:06] 2025-10-13 05:58:14,561 | INFO     | exeerrordiag: 
[2025-10-13 01:59:06] 2025-10-13 05:58:14,561 | INFO     | exitcode: 0
[2025-10-13 01:59:06] 2025-10-13 05:58:14,562 | INFO     | exitmsg: OK
[2025-10-13 01:59:06] 2025-10-13 05:58:14,562 | INFO     | cpuconsumptiontime: 46484 s
[2025-10-13 01:59:06] 2025-10-13 05:58:14,562 | INFO     | nevents: 400
[2025-10-13 01:59:06] 2025-10-13 05:58:14,562 | INFO     | neventsw: 0
[2025-10-13 01:59:06] 2025-10-13 05:58:14,562 | INFO     | pid: 14078
[2025-10-13 01:59:06] 2025-10-13 05:58:14,562 | INFO     | pgrp: 14078
[2025-10-13 01:59:06] 2025-10-13 05:58:14,563 | INFO     | corecount: 12
[2025-10-13 01:59:06] 2025-10-13 05:58:14,563 | INFO     | event service: False
[2025-10-13 01:59:06] 2025-10-13 05:58:14,563 | INFO     | sizes: {0: 2348857, 1: 2348857, 5: 2349147, 11: 2349203, 4375: 2375252, 4377: 2384250, 4378: 2384434, 4384: 2384628}
[2025-10-13 01:59:06] 2025-10-13 05:58:14,563 | INFO     | --------------------------------------------------
[2025-10-13 01:59:06] 2025-10-13 05:58:14,563 | INFO     | 
[2025-10-13 01:59:06] 2025-10-13 05:58:14,563 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 01:59:06] 2025-10-13 05:58:14,589 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 01:59:06] 2025-10-13 05:58:14,589 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 01:59:06] 2025-10-13 05:58:14,589 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 01:59:06] 2025-10-13 05:58:14,589 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 01:59:06] 2025-10-13 05:58:14,590 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 01:59:06] 2025-10-13 05:58:14,590 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 01:59:06] 2025-10-13 05:58:14,590 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 01:59:06] 2025-10-13 05:58:14,590 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 01:59:06] 2025-10-13 05:58:14,590 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 01:59:06] 2025-10-13 05:58:14,590 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 01:59:06] 2025-10-13 05:58:14,591 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 01:59:06] 2025-10-13 05:58:14,591 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 01:59:06] 2025-10-13 05:58:14,591 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 01:59:06] 2025-10-13 05:58:14,591 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 01:59:06] 2025-10-13 05:58:14,591 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 01:59:06] 2025-10-13 05:58:14,592 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 01:59:06] 2025-10-13 05:58:14,592 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 01:59:06] 2025-10-13 05:58:14,592 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 01:59:06] 2025-10-13 05:58:14,592 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 01:59:06] 2025-10-13 05:58:14,592 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 01:59:06] 2025-10-13 05:58:14,592 | INFO     | job 6841068821 has completed (purged errors)
[2025-10-13 01:59:06] 2025-10-13 05:58:14,593 | INFO     | overall cleanup function is called
[2025-10-13 01:59:06] 2025-10-13 05:58:15,601 | INFO     | --- collectZombieJob: --- 10, [14078]
[2025-10-13 01:59:06] 2025-10-13 05:58:15,601 | INFO     | zombie collector waiting for pid 14078
[2025-10-13 01:59:06] 2025-10-13 05:58:15,601 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 01:59:06] 2025-10-13 05:58:15,602 | INFO     | collected zombie processes
[2025-10-13 01:59:06] 2025-10-13 05:58:15,602 | INFO     | will attempt to kill all subprocesses of pid=14078
[2025-10-13 01:59:06] 2025-10-13 05:58:15,700 | INFO     | process IDs to be killed: [14078] (in reverse order)
[2025-10-13 01:59:06] 2025-10-13 05:58:15,749 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 01:59:06] 2025-10-13 05:58:15,749 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 01:59:06] 2025-10-13 05:58:15,753 | INFO     | did not find any defunct processes belonging to 14078
[2025-10-13 01:59:06] 2025-10-13 05:58:15,757 | INFO     | did not find any defunct processes belonging to 14078
[2025-10-13 01:59:06] 2025-10-13 05:58:15,757 | INFO     | ready for new job
[2025-10-13 01:59:06] 2025-10-13 05:58:15,757 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 01:59:06] 2025-10-13 05:58:15,758 | INFO     | ***************************************
[2025-10-13 01:59:06] 2025-10-13 05:58:15,758 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 01:59:06] 2025-10-13 05:58:15,758 | INFO     | ***************************************
[2025-10-13 01:59:06] 2025-10-13 05:58:15,758 | INFO     | 
[2025-10-13 01:59:06] 2025-10-13 05:58:15,759 | INFO     | architecture information:
[2025-10-13 01:59:06] 2025-10-13 05:58:15,760 | INFO     | executing command: cat /etc/os-release
[2025-10-13 01:59:06] 2025-10-13 05:58:15,773 | INFO     | cat /etc/os-release:
[2025-10-13 01:59:06] NAME="CentOS Linux"
[2025-10-13 01:59:06] VERSION="7 (Core)"
[2025-10-13 01:59:06] ID="centos"
[2025-10-13 01:59:06] ID_LIKE="rhel fedora"
[2025-10-13 01:59:06] VERSION_ID="7"
[2025-10-13 01:59:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 01:59:06] ANSI_COLOR="0;31"
[2025-10-13 01:59:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 01:59:06] HOME_URL="https://www.centos.org/"
[2025-10-13 01:59:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 01:59:06] 
[2025-10-13 01:59:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 01:59:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 01:59:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 01:59:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 01:59:06] 
[2025-10-13 01:59:06] 2025-10-13 05:58:15,774 | INFO     | ***************************************
[2025-10-13 01:59:06] 2025-10-13 05:58:16,277 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 01:59:06] 2025-10-13 05:58:16,293 | INFO     | sufficient remaining disk space (29368516608 B)
[2025-10-13 01:59:06] 2025-10-13 05:58:16,294 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 01:59:06] 2025-10-13 05:58:16,294 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 01:59:06] 2025-10-13 05:58:16,294 | INFO     | update_server=False
[2025-10-13 01:59:06] 2025-10-13 05:58:16,294 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 01:59:06] 2025-10-13 05:58:16,468 | INFO     | all data control threads have been joined
[2025-10-13 01:59:06] 2025-10-13 05:58:16,508 | INFO     | all job control threads have been joined
[2025-10-13 01:59:06] 2025-10-13 05:58:16,724 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 01:59:06] 2025-10-13 05:58:16,725 | INFO     | aborting loop
[2025-10-13 01:59:06] 2025-10-13 05:58:17,166 | INFO     | all payload control threads have been joined
[2025-10-13 01:59:06] 2025-10-13 05:58:17,300 | INFO     | [job] retrieve thread has finished
[2025-10-13 01:59:06] 2025-10-13 05:58:17,400 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 01:59:06] 2025-10-13 05:58:17,474 | INFO     | [data] control thread has finished
[2025-10-13 01:59:06] 2025-10-13 05:58:17,514 | INFO     | [job] control thread has finished
[2025-10-13 01:59:06] 2025-10-13 05:58:17,730 | INFO     | [job] job monitor thread has finished
[2025-10-13 01:59:06] 2025-10-13 05:58:17,783 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 01:59:06] 2025-10-13 05:58:17,838 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 01:59:06] 2025-10-13 05:58:17,916 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 01:59:06] 2025-10-13 05:58:18,009 | INFO     | [data] copytool_in thread has finished
[2025-10-13 01:59:06] 2025-10-13 05:58:18,170 | INFO     | [payload] control thread has finished
[2025-10-13 01:59:06] 2025-10-13 05:58:18,278 | INFO     | [payload] failed_post thread has finished
[2025-10-13 01:59:06] 2025-10-13 05:58:18,572 | INFO     | [job] validate thread has finished
[2025-10-13 01:59:06] 2025-10-13 05:58:18,782 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 01:59:06] 2025-10-13 05:58:18,838 | INFO     | [payload] validate_post thread has finished
[2025-10-13 01:59:06] 2025-10-13 05:58:19,270 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 01:59:06] 2025-10-13 05:58:19,788 | INFO     | [data] copytool_out thread has finished
[2025-10-13 01:59:06] 2025-10-13 05:58:20,275 | INFO     | [job] queue monitor thread has finished
[2025-10-13 01:59:06] 2025-10-13 05:58:22,788 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 01:59:06] 2025-10-13 05:58:26,414 | INFO     | job.realtimelogging is not enabled
[2025-10-13 01:59:06] 2025-10-13 05:58:27,419 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 01:59:06] 2025-10-13 05:58:45,901 | INFO     | PID=7560 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-13 01:59:06] 2025-10-13 05:58:45,901 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 01:59:06] 2025-10-13 05:58:45,901 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 01:59:06] 2025-10-13 05:58:45,901 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 01:59:06] 2025-10-13 05:59:00,007 | INFO     | [monitor] cgroup control has ended
[2025-10-13 01:59:06] 2025-10-13 05:59:01,010 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140248463746880)>', '<ExcThread(monitor, started 140248021444352)>']
[2025-10-13 01:59:06] 2025-10-13 05:59:01,973 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 01:59:06] 2025-10-13 05:59:01,973 | INFO     | [monitor] control thread has ended
[2025-10-13 01:59:06] 2025-10-13 05:59:06,023 | INFO     | all workflow threads have been joined
[2025-10-13 01:59:06] 2025-10-13 05:59:06,023 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 01:59:06] 2025-10-13 05:59:06,023 | INFO     | traces error code: 0
[2025-10-13 01:59:06] 2025-10-13 05:59:06,023 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 01:59:06] 2025-10-13 05:59:06,119 [wrapper] ==== pilot stdout END ====
[2025-10-13 01:59:06] 2025-10-13 05:59:06,123 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 01:59:06] 2025-10-13 05:59:06,127 [wrapper] pilotpid: 7560
[2025-10-13 01:59:06] 2025-10-13 05:59:06,131 [wrapper] Pilot exit status: 0
[2025-10-13 01:59:06] 2025-10-13 05:59:06,145 [wrapper] pandaids: 6841068821
[2025-10-13 01:59:06] 2025-10-13 05:59:06,192 [wrapper] cleanup supervisor_pilot 23715 7561
[2025-10-13 01:59:06] 2025-10-13 05:59:06,196 [wrapper] Test setup, not cleaning
[2025-10-13 01:59:06] 2025-10-13 05:59:06,200 [wrapper] apfmon messages muted
[2025-10-13 01:59:06] 2025-10-13 05:59:06,204 [wrapper] ==== wrapper stdout END ====
[2025-10-13 01:59:06] 2025-10-13 05:59:06,207 [wrapper] ==== wrapper stderr END ====
[2025-10-13 01:59:06]  *** Error codes and diagnostics ***
[2025-10-13 01:59:06]     "exeErrorCode": 0,
[2025-10-13 01:59:06]     "exeErrorDiag": "",
[2025-10-13 01:59:06]     "pilotErrorCode": 0,
[2025-10-13 01:59:06]     "pilotErrorDiag": "",
[2025-10-13 01:59:06]  *** Listing of results directory ***
[2025-10-13 01:59:06] total 410020
[2025-10-13 01:59:06] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 20:11 pilot3.tar.gz
[2025-10-13 01:59:06] -rwx------ 1 boincer umatlas     36292 Oct 12 20:21 runpilot2-wrapper.sh
[2025-10-13 01:59:06] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 20:21 queuedata.json
[2025-10-13 01:59:06] -rw-r--r-- 1 boincer umatlas       100 Oct 13 00:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 01:59:06] -rwxr-xr-x 1 boincer umatlas      7986 Oct 13 00:44 run_atlas
[2025-10-13 01:59:06] -rw-r--r-- 1 boincer umatlas       105 Oct 13 00:44 job.xml
[2025-10-13 01:59:06] -rw-r--r-- 2 boincer umatlas 218217752 Oct 13 00:44 EVNT.46676267._004689.pool.root.1
[2025-10-13 01:59:06] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 00:44 start_atlas.sh
[2025-10-13 01:59:06] drwxrwx--x 2 boincer umatlas      4096 Oct 13 00:44 shared
[2025-10-13 01:59:06] -rw-r--r-- 2 boincer umatlas    569676 Oct 13 00:44 input.tar.gz
[2025-10-13 01:59:06] -rw-r--r-- 1 boincer umatlas         0 Oct 13 00:44 boinc_lockfile
[2025-10-13 01:59:06] -rw-r--r-- 1 boincer umatlas      2550 Oct 13 00:44 pandaJob.out
[2025-10-13 01:59:06] -rw------- 1 boincer umatlas    974365 Oct 13 00:44 agis_schedconf.cvmfs.json
[2025-10-13 01:59:06] -rw------- 1 boincer umatlas   1560580 Oct 13 00:44 agis_ddmendpoints.agis.ALL.json
[2025-10-13 01:59:06] drwx------ 5 boincer umatlas      4096 Oct 13 00:44 pilot3
[2025-10-13 01:59:06] -rw-r--r-- 1 boincer umatlas      5953 Oct 13 01:56 init_data.xml
[2025-10-13 01:59:06] -rw------- 1 boincer umatlas 195713962 Oct 13 01:57 HITS.46676269._093057.pool.root.1
[2025-10-13 01:59:06] -rw------- 1 boincer umatlas        95 Oct 13 01:57 pilot_heartbeat.json
[2025-10-13 01:59:06] -rw-r--r-- 1 boincer umatlas       529 Oct 13 01:57 boinc_task_state.xml
[2025-10-13 01:59:06] -rw------- 1 boincer umatlas      1049 Oct 13 01:58 memory_monitor_summary.json
[2025-10-13 01:59:06] -rw------- 1 boincer umatlas    375653 Oct 13 01:58 log.46676269._093057.job.log.tgz.1
[2025-10-13 01:59:06] -rw------- 1 boincer umatlas      7859 Oct 13 01:58 heartbeat.json
[2025-10-13 01:59:06] -rw-r--r-- 1 boincer umatlas        27 Oct 13 01:58 wrapper_checkpoint.txt
[2025-10-13 01:59:06] -rw-r--r-- 1 boincer umatlas      8192 Oct 13 01:58 boinc_mmap_file
[2025-10-13 01:59:06] -rw------- 1 boincer umatlas      4817 Oct 13 01:59 pilotlog.txt
[2025-10-13 01:59:06] -rw------- 1 boincer umatlas    640518 Oct 13 01:59 log.46676269._093057.job.log.1
[2025-10-13 01:59:06] -rw------- 1 boincer umatlas       357 Oct 13 01:59 output.list
[2025-10-13 01:59:06] -rw-r--r-- 1 boincer umatlas       620 Oct 13 01:59 runtime_log
[2025-10-13 01:59:06] -rw------- 1 boincer umatlas   1034240 Oct 13 01:59 result.tar.gz
[2025-10-13 01:59:06] -rw------- 1 boincer umatlas       659 Oct 13 01:59 J8KNDmvULS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmsMVMDmqnCdHn.diag
[2025-10-13 01:59:06] -rw-r--r-- 1 boincer umatlas      8705 Oct 13 01:59 runtime_log.err
[2025-10-13 01:59:06] -rw-r--r-- 1 boincer umatlas     21852 Oct 13 01:59 stderr.txt
[2025-10-13 01:59:06] HITS file was successfully produced:
[2025-10-13 01:59:06] -rw------- 1 boincer umatlas 195713962 Oct 13 01:57 shared/HITS.pool.root.1
[2025-10-13 01:59:06]  *** Contents of shared directory: ***
[2025-10-13 01:59:06] total 405824
[2025-10-13 01:59:06] -rw-r--r-- 2 boincer umatlas 218217752 Oct 13 00:44 ATLAS.root_0
[2025-10-13 01:59:06] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 00:44 start_atlas.sh
[2025-10-13 01:59:06] -rw-r--r-- 2 boincer umatlas    569676 Oct 13 00:44 input.tar.gz
[2025-10-13 01:59:06] -rw------- 1 boincer umatlas 195713962 Oct 13 01:57 HITS.pool.root.1
[2025-10-13 01:59:06] -rw------- 1 boincer umatlas   1034240 Oct 13 01:59 result.tar.gz
01:59:08 (3886): run_atlas exited; CPU time 46415.045269
01:59:08 (3886): called boinc_finish(0)

</stderr_txt>
]]>

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