Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
00:46:03 (14512): wrapper (7.7.26015): starting
00:46:03 (14512): wrapper: running run_atlas (--nthreads 12)
[2025-10-13 00:46:03] Arguments: --nthreads 12
[2025-10-13 00:46:03] Threads: 12
[2025-10-13 00:46:03] Checking for CVMFS
[2025-10-13 00:46:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 00:46:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 00:46:03] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 00:46:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 00:46:04] 2.11.2.0 2984 223813 97328 151649 0 59 15357406 20275200 1 130560 1 110808379 99.984 13402231 12645 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 00:46:04] CVMFS is ok
[2025-10-13 00:46:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 00:46:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 00:46:04] Further information can be found at the LHC@home message board.
[2025-10-13 00:46:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 00:46:04] Checking for apptainer binary...
[2025-10-13 00:46:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 00:46:04] Running /usr/bin/apptainer --version
[2025-10-13 00:46:04] apptainer version 1.3.2-1.el7
[2025-10-13 00:46:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 00:46:05] c-205-26.aglt2.org
[2025-10-13 00:46:05] apptainer works
[2025-10-13 00:46:05] Set ATHENA_PROC_NUMBER=12
[2025-10-13 00:46:05] Set ATHENA_CORE_NUMBER=12
[2025-10-13 00:46:05] Starting ATLAS job with PandaID=6840970409
[2025-10-13 00:46:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 01:58:32]  *** The last 200 lines of the pilot log: ***
[2025-10-13 01:58:32]  scope=mc23_13p6TeV
[2025-10-13 01:58:32]  status=None
[2025-10-13 01:58:32]  status_code=0
[2025-10-13 01:58:32]  storage_token=
[2025-10-13 01:58:32]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6840970409/log.46676269._092746.job.log.tgz.1
[2025-10-13 01:58:32]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/42/f4/log.46676269._092746.job.log.tgz.1
[2025-10-13 01:58:32]  workdir=None
[2025-10-13 01:58:32] ]
[2025-10-13 01:58:32] 2025-10-13 05:57:31,367 | INFO     | transferring file log.46676269._092746.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6840970409/log.46676269._092746.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-13 01:58:32] 2025-10-13 05:57:31,367 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6840970409/log.46676269._092746.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._092746.job
[2025-10-13 01:58:32] 2025-10-13 05:57:31,388 | INFO     | adding to output.list: log.46676269._092746.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/42/f4/log.46676269._092746.job.log.tg
[2025-10-13 01:58:32] 2025-10-13 05:57:31,389 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 01:58:32] 2025-10-13 05:57:31,389 | INFO     | summary of transferred files:
[2025-10-13 01:58:32] 2025-10-13 05:57:31,389 | INFO     |  -- lfn=log.46676269._092746.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 01:58:32] 2025-10-13 05:57:31,389 | INFO     | stage-out finished correctly
[2025-10-13 01:58:32] 2025-10-13 05:57:31,946 | INFO     | time since job start (4271s) is within the limit (172800.0s)
[2025-10-13 01:58:32] 2025-10-13 05:57:33,217 | INFO     | monitor loop #318: job 0:6840970409 is in state 'finished'
[2025-10-13 01:58:32] 2025-10-13 05:57:33,218 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 01:58:32] 2025-10-13 05:57:33,581 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 01:58:32] 2025-10-13 05:57:33,948 | INFO     | time since job start (4273s) is within the limit (172800.0s)
[2025-10-13 01:58:32] 2025-10-13 05:57:34,588 | INFO     | job 6840970409 has state=finished
[2025-10-13 01:58:32] 2025-10-13 05:57:34,588 | INFO     | preparing for final server update for job 6840970409 in state='finished'
[2025-10-13 01:58:32] 2025-10-13 05:57:34,589 | INFO     | this job has now completed (state=finished)
[2025-10-13 01:58:32] 2025-10-13 05:57:34,589 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 01:58:32] 2025-10-13 05:57:34,589 | INFO     | log transfer has been attempted: DONE
[2025-10-13 01:58:32] 2025-10-13 05:57:34,589 | INFO     | job 6840970409 has finished - writing final server update
[2025-10-13 01:58:32] 2025-10-13 05:57:34,590 | INFO     | total number of processed events: 400 (read)
[2025-10-13 01:58:32] 2025-10-13 05:57:34,590 | INFO     | executing command: lscpu
[2025-10-13 01:58:32] 2025-10-13 05:57:34,617 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 01:58:32] 2025-10-13 05:57:35,721 | INFO     | monitor loop #319: job 0:6840970409 is in state 'finished'
[2025-10-13 01:58:32] 2025-10-13 05:57:35,721 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 01:58:32] 2025-10-13 05:57:35,953 | INFO     | time since job start (4275s) is within the limit (172800.0s)
[2025-10-13 01:58:32] 2025-10-13 05:57:37,958 | INFO     | time since job start (4277s) is within the limit (172800.0s)
[2025-10-13 01:58:32] 2025-10-13 05:57:38,223 | INFO     | monitor loop #320: job 0:6840970409 is in state 'finished'
[2025-10-13 01:58:32] 2025-10-13 05:57:38,224 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 01:58:32] 2025-10-13 05:57:39,963 | INFO     | time since job start (4279s) is within the limit (172800.0s)
[2025-10-13 01:58:32] 2025-10-13 05:57:40,383 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-13 01:58:32] 2025-10-13 05:57:40,386 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1684.75
[2025-10-13 01:58:32] 2025-10-13 05:57:40,388 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6840970409/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 01:58:32] 2025-10-13 05:57:40,389 | INFO     | extracted standard info from prmon json
[2025-10-13 01:58:32] 2025-10-13 05:57:40,389 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 01:58:32] 2025-10-13 05:57:40,389 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 01:58:32] 2025-10-13 05:57:40,389 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 01:58:32] 2025-10-13 05:57:40,389 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 01:58:32] 2025-10-13 05:57:40,391 | INFO     | fitting pss+swap vs Time
[2025-10-13 01:58:32] 2025-10-13 05:57:40,391 | INFO     | sum of square deviations: 77515872.0
[2025-10-13 01:58:32] 2025-10-13 05:57:40,391 | INFO     | sum of deviations: -5711458548.0
[2025-10-13 01:58:32] 2025-10-13 05:57:40,391 | INFO     | mean x: 1760333005.0
[2025-10-13 01:58:32] 2025-10-13 05:57:40,391 | INFO     | mean y: 2768173.8571428573
[2025-10-13 01:58:32] 2025-10-13 05:57:40,392 | INFO     | -- intersect: 129706127361.17014
[2025-10-13 01:58:32] 2025-10-13 05:57:40,392 | INFO     | intersect: 129706127361.17014
[2025-10-13 01:58:32] 2025-10-13 05:57:40,392 | INFO     | chi2: 0.07818327895509453
[2025-10-13 01:58:32] 2025-10-13 05:57:40,392 | INFO     | -- intersect: 129706127361.17014
[2025-10-13 01:58:32] 2025-10-13 05:57:40,392 | INFO     | current memory leak: -73.68 B/s (using 63 data points, chi2=0.08)
[2025-10-13 01:58:32] 2025-10-13 05:57:40,392 | INFO     | could have reported an average CPU frequency of 2052 MHz (6 samples)
[2025-10-13 01:58:32] 2025-10-13 05:57:40,393 | INFO     | ..............................
[2025-10-13 01:58:32] 2025-10-13 05:57:40,393 | INFO     | . Timing measurements:
[2025-10-13 01:58:32] 2025-10-13 05:57:40,393 | INFO     | . get job = 0 s
[2025-10-13 01:58:32] 2025-10-13 05:57:40,393 | INFO     | . initial setup = 2 s
[2025-10-13 01:58:32] 2025-10-13 05:57:40,393 | INFO     | . payload setup = 7 s
[2025-10-13 01:58:32] 2025-10-13 05:57:40,393 | INFO     | . stage-in = 0 s
[2025-10-13 01:58:32] 2025-10-13 05:57:40,393 | INFO     | . payload execution = 4242 s
[2025-10-13 01:58:32] 2025-10-13 05:57:40,393 | INFO     | . stage-out = 0 s
[2025-10-13 01:58:32] 2025-10-13 05:57:40,393 | INFO     | . log creation = 0 s
[2025-10-13 01:58:32] 2025-10-13 05:57:40,393 | INFO     | ..............................
[2025-10-13 01:58:32] 2025-10-13 05:57:40,476 | INFO     | 
[2025-10-13 01:58:32] 2025-10-13 05:57:40,476 | INFO     | job summary report
[2025-10-13 01:58:32] 2025-10-13 05:57:40,476 | INFO     | --------------------------------------------------
[2025-10-13 01:58:32] 2025-10-13 05:57:40,476 | INFO     | PanDA job id: 6840970409
[2025-10-13 01:58:32] 2025-10-13 05:57:40,476 | INFO     | task id: 46676269
[2025-10-13 01:58:32] 2025-10-13 05:57:40,477 | INFO     | errors: (none)
[2025-10-13 01:58:32] 2025-10-13 05:57:40,477 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 01:58:32] 2025-10-13 05:57:40,477 | INFO     | pilot state: finished 
[2025-10-13 01:58:32] 2025-10-13 05:57:40,477 | INFO     | transexitcode: 0
[2025-10-13 01:58:32] 2025-10-13 05:57:40,477 | INFO     | exeerrorcode: 0
[2025-10-13 01:58:32] 2025-10-13 05:57:40,477 | INFO     | exeerrordiag: 
[2025-10-13 01:58:32] 2025-10-13 05:57:40,478 | INFO     | exitcode: 0
[2025-10-13 01:58:32] 2025-10-13 05:57:40,478 | INFO     | exitmsg: OK
[2025-10-13 01:58:32] 2025-10-13 05:57:40,478 | INFO     | cpuconsumptiontime: 45079 s
[2025-10-13 01:58:32] 2025-10-13 05:57:40,478 | INFO     | nevents: 400
[2025-10-13 01:58:32] 2025-10-13 05:57:40,478 | INFO     | neventsw: 0
[2025-10-13 01:58:32] 2025-10-13 05:57:40,478 | INFO     | pid: 24659
[2025-10-13 01:58:32] 2025-10-13 05:57:40,479 | INFO     | pgrp: 24659
[2025-10-13 01:58:32] 2025-10-13 05:57:40,479 | INFO     | corecount: 12
[2025-10-13 01:58:32] 2025-10-13 05:57:40,479 | INFO     | event service: False
[2025-10-13 01:58:32] 2025-10-13 05:57:40,479 | INFO     | sizes: {0: 2348686, 1: 2348885, 5: 2349147, 11: 2349203, 4252: 2375224, 4255: 2384222, 4257: 2384406, 4264: 2384600}
[2025-10-13 01:58:32] 2025-10-13 05:57:40,479 | INFO     | --------------------------------------------------
[2025-10-13 01:58:32] 2025-10-13 05:57:40,479 | INFO     | 
[2025-10-13 01:58:32] 2025-10-13 05:57:40,480 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 01:58:32] 2025-10-13 05:57:40,503 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 01:58:32] 2025-10-13 05:57:40,503 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 01:58:32] 2025-10-13 05:57:40,503 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 01:58:32] 2025-10-13 05:57:40,503 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 01:58:32] 2025-10-13 05:57:40,503 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 01:58:32] 2025-10-13 05:57:40,504 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 01:58:32] 2025-10-13 05:57:40,504 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 01:58:32] 2025-10-13 05:57:40,504 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 01:58:32] 2025-10-13 05:57:40,504 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 01:58:32] 2025-10-13 05:57:40,504 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 01:58:32] 2025-10-13 05:57:40,505 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 01:58:32] 2025-10-13 05:57:40,505 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 01:58:32] 2025-10-13 05:57:40,505 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 01:58:32] 2025-10-13 05:57:40,505 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 01:58:32] 2025-10-13 05:57:40,505 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 01:58:32] 2025-10-13 05:57:40,505 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 01:58:32] 2025-10-13 05:57:40,506 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 01:58:32] 2025-10-13 05:57:40,506 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 01:58:32] 2025-10-13 05:57:40,506 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 01:58:32] 2025-10-13 05:57:40,506 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 01:58:32] 2025-10-13 05:57:40,506 | INFO     | job 6840970409 has completed (purged errors)
[2025-10-13 01:58:32] 2025-10-13 05:57:40,506 | INFO     | overall cleanup function is called
[2025-10-13 01:58:32] 2025-10-13 05:57:41,510 | INFO     | --- collectZombieJob: --- 10, [24659]
[2025-10-13 01:58:32] 2025-10-13 05:57:41,510 | INFO     | zombie collector waiting for pid 24659
[2025-10-13 01:58:32] 2025-10-13 05:57:41,510 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 01:58:32] 2025-10-13 05:57:41,510 | INFO     | collected zombie processes
[2025-10-13 01:58:32] 2025-10-13 05:57:41,511 | INFO     | will attempt to kill all subprocesses of pid=24659
[2025-10-13 01:58:32] 2025-10-13 05:57:41,604 | INFO     | process IDs to be killed: [24659] (in reverse order)
[2025-10-13 01:58:32] 2025-10-13 05:57:41,657 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 01:58:32] 2025-10-13 05:57:41,657 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 01:58:32] 2025-10-13 05:57:41,661 | INFO     | did not find any defunct processes belonging to 24659
[2025-10-13 01:58:32] 2025-10-13 05:57:41,664 | INFO     | did not find any defunct processes belonging to 24659
[2025-10-13 01:58:32] 2025-10-13 05:57:41,664 | INFO     | ready for new job
[2025-10-13 01:58:32] 2025-10-13 05:57:41,665 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 01:58:32] 2025-10-13 05:57:41,666 | INFO     | ***************************************
[2025-10-13 01:58:32] 2025-10-13 05:57:41,666 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 01:58:32] 2025-10-13 05:57:41,666 | INFO     | ***************************************
[2025-10-13 01:58:32] 2025-10-13 05:57:41,666 | INFO     | 
[2025-10-13 01:58:32] 2025-10-13 05:57:41,667 | INFO     | architecture information:
[2025-10-13 01:58:32] 2025-10-13 05:57:41,667 | INFO     | executing command: cat /etc/os-release
[2025-10-13 01:58:32] 2025-10-13 05:57:41,682 | INFO     | cat /etc/os-release:
[2025-10-13 01:58:32] NAME="CentOS Linux"
[2025-10-13 01:58:32] VERSION="7 (Core)"
[2025-10-13 01:58:32] ID="centos"
[2025-10-13 01:58:32] ID_LIKE="rhel fedora"
[2025-10-13 01:58:32] VERSION_ID="7"
[2025-10-13 01:58:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 01:58:32] ANSI_COLOR="0;31"
[2025-10-13 01:58:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 01:58:32] HOME_URL="https://www.centos.org/"
[2025-10-13 01:58:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 01:58:32] 
[2025-10-13 01:58:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 01:58:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 01:58:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 01:58:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 01:58:32] 
[2025-10-13 01:58:32] 2025-10-13 05:57:41,682 | INFO     | ***************************************
[2025-10-13 01:58:32] 2025-10-13 05:57:42,185 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 01:58:32] 2025-10-13 05:57:42,202 | INFO     | sufficient remaining disk space (29372710912 B)
[2025-10-13 01:58:32] 2025-10-13 05:57:42,202 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 01:58:32] 2025-10-13 05:57:42,203 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 01:58:32] 2025-10-13 05:57:42,203 | INFO     | update_server=False
[2025-10-13 01:58:32] 2025-10-13 05:57:42,203 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 01:58:32] 2025-10-13 05:57:42,203 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 01:58:32] 2025-10-13 05:57:42,203 | INFO     | aborting loop
[2025-10-13 01:58:32] 2025-10-13 05:57:42,204 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 01:58:32] 2025-10-13 05:57:42,204 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 01:58:32] 2025-10-13 05:57:42,217 | INFO     | all job control threads have been joined
[2025-10-13 01:58:32] 2025-10-13 05:57:42,399 | INFO     | all payload control threads have been joined
[2025-10-13 01:58:32] 2025-10-13 05:57:42,555 | INFO     | all data control threads have been joined
[2025-10-13 01:58:32] 2025-10-13 05:57:43,208 | INFO     | [job] retrieve thread has finished
[2025-10-13 01:58:32] 2025-10-13 05:57:43,209 | INFO     | [job] job monitor thread has finished
[2025-10-13 01:58:32] 2025-10-13 05:57:43,210 | INFO     | [job] queue monitor thread has finished
[2025-10-13 01:58:32] 2025-10-13 05:57:43,222 | INFO     | [job] control thread has finished
[2025-10-13 01:58:32] 2025-10-13 05:57:43,344 | INFO     | [data] copytool_in thread has finished
[2025-10-13 01:58:32] 2025-10-13 05:57:43,397 | INFO     | [payload] failed_post thread has finished
[2025-10-13 01:58:32] 2025-10-13 05:57:43,405 | INFO     | [payload] control thread has finished
[2025-10-13 01:58:32] 2025-10-13 05:57:43,561 | INFO     | [data] control thread has finished
[2025-10-13 01:58:32] 2025-10-13 05:57:43,784 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 01:58:32] 2025-10-13 05:57:43,982 | INFO     | [job] validate thread has finished
[2025-10-13 01:58:32] 2025-10-13 05:57:43,988 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 01:58:32] 2025-10-13 05:57:44,172 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 01:58:32] 2025-10-13 05:57:44,209 | INFO     | [data] copytool_out thread has finished
[2025-10-13 01:58:32] 2025-10-13 05:57:44,288 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 01:58:32] 2025-10-13 05:57:44,786 | INFO     | [payload] validate_post thread has finished
[2025-10-13 01:58:32] 2025-10-13 05:57:48,178 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 01:58:32] 2025-10-13 05:57:52,563 | INFO     | job.realtimelogging is not enabled
[2025-10-13 01:58:32] 2025-10-13 05:57:53,568 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 01:58:32] 2025-10-13 05:58:13,153 | INFO     | PID=18186 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-13 01:58:32] 2025-10-13 05:58:13,153 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 01:58:32] 2025-10-13 05:58:13,153 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 01:58:32] 2025-10-13 05:58:13,153 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 01:58:32] 2025-10-13 05:58:26,945 | INFO     | [monitor] cgroup control has ended
[2025-10-13 01:58:32] 2025-10-13 05:58:27,360 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140042331502400)>', '<ExcThread(monitor, started 140041753974528)>']
[2025-10-13 01:58:32] 2025-10-13 05:58:28,221 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 01:58:32] 2025-10-13 05:58:28,221 | INFO     | [monitor] control thread has ended
[2025-10-13 01:58:32] 2025-10-13 05:58:32,370 | INFO     | all workflow threads have been joined
[2025-10-13 01:58:32] 2025-10-13 05:58:32,378 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 01:58:32] 2025-10-13 05:58:32,378 | INFO     | traces error code: 0
[2025-10-13 01:58:32] 2025-10-13 05:58:32,378 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 01:58:32] 2025-10-13 05:58:32,470 [wrapper] ==== pilot stdout END ====
[2025-10-13 01:58:32] 2025-10-13 05:58:32,473 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 01:58:32] 2025-10-13 05:58:32,477 [wrapper] pilotpid: 18186
[2025-10-13 01:58:32] 2025-10-13 05:58:32,481 [wrapper] Pilot exit status: 0
[2025-10-13 01:58:32] 2025-10-13 05:58:32,496 [wrapper] pandaids: 6840970409
[2025-10-13 01:58:32] 2025-10-13 05:58:32,545 [wrapper] cleanup supervisor_pilot  7619 18187
[2025-10-13 01:58:32] 2025-10-13 05:58:32,549 [wrapper] Test setup, not cleaning
[2025-10-13 01:58:32] 2025-10-13 05:58:32,553 [wrapper] apfmon messages muted
[2025-10-13 01:58:32] 2025-10-13 05:58:32,557 [wrapper] ==== wrapper stdout END ====
[2025-10-13 01:58:32] 2025-10-13 05:58:32,561 [wrapper] ==== wrapper stderr END ====
[2025-10-13 01:58:32]  *** Error codes and diagnostics ***
[2025-10-13 01:58:32]     "exeErrorCode": 0,
[2025-10-13 01:58:32]     "exeErrorDiag": "",
[2025-10-13 01:58:32]     "pilotErrorCode": 0,
[2025-10-13 01:58:32]     "pilotErrorDiag": "",
[2025-10-13 01:58:32]  *** Listing of results directory ***
[2025-10-13 01:58:32] total 404376
[2025-10-13 01:58:32] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 20:02 queuedata.json
[2025-10-13 01:58:32] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 20:02 pilot3.tar.gz
[2025-10-13 01:58:32] -rwx------ 1 boincer umatlas     36292 Oct 12 20:02 runpilot2-wrapper.sh
[2025-10-13 01:58:32] -rw-r--r-- 1 boincer umatlas       100 Oct 13 00:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 01:58:32] -rwxr-xr-x 1 boincer umatlas      7986 Oct 13 00:46 run_atlas
[2025-10-13 01:58:32] -rw-r--r-- 1 boincer umatlas       105 Oct 13 00:46 job.xml
[2025-10-13 01:58:32] -rw-r--r-- 2 boincer umatlas 219120669 Oct 13 00:46 EVNT.46676267._004679.pool.root.1
[2025-10-13 01:58:32] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 00:46 start_atlas.sh
[2025-10-13 01:58:32] drwxrwx--x 2 boincer umatlas      4096 Oct 13 00:46 shared
[2025-10-13 01:58:32] -rw-r--r-- 2 boincer umatlas    569678 Oct 13 00:46 input.tar.gz
[2025-10-13 01:58:32] -rw-r--r-- 1 boincer umatlas         0 Oct 13 00:46 boinc_lockfile
[2025-10-13 01:58:32] -rw-r--r-- 1 boincer umatlas      2550 Oct 13 00:46 pandaJob.out
[2025-10-13 01:58:32] -rw------- 1 boincer umatlas    974365 Oct 13 00:46 agis_schedconf.cvmfs.json
[2025-10-13 01:58:32] -rw------- 1 boincer umatlas   1560580 Oct 13 00:46 agis_ddmendpoints.agis.ALL.json
[2025-10-13 01:58:32] drwx------ 5 boincer umatlas      4096 Oct 13 00:46 pilot3
[2025-10-13 01:58:32] -rw------- 1 boincer umatlas 189069032 Oct 13 01:57 HITS.46676269._092746.pool.root.1
[2025-10-13 01:58:32] -rw------- 1 boincer umatlas        95 Oct 13 01:57 pilot_heartbeat.json
[2025-10-13 01:58:32] -rw-r--r-- 1 boincer umatlas       529 Oct 13 01:57 boinc_task_state.xml
[2025-10-13 01:58:32] -rw------- 1 boincer umatlas      1049 Oct 13 01:57 memory_monitor_summary.json
[2025-10-13 01:58:32] -rw------- 1 boincer umatlas    368946 Oct 13 01:57 log.46676269._092746.job.log.tgz.1
[2025-10-13 01:58:32] -rw-r--r-- 1 boincer umatlas      5953 Oct 13 01:57 init_data.xml
[2025-10-13 01:58:32] -rw------- 1 boincer umatlas      7856 Oct 13 01:57 heartbeat.json
[2025-10-13 01:58:32] -rw-r--r-- 1 boincer umatlas      8192 Oct 13 01:58 boinc_mmap_file
[2025-10-13 01:58:32] -rw-r--r-- 1 boincer umatlas        27 Oct 13 01:58 wrapper_checkpoint.txt
[2025-10-13 01:58:32] -rw------- 1 boincer umatlas      4818 Oct 13 01:58 pilotlog.txt
[2025-10-13 01:58:32] -rw------- 1 boincer umatlas    623608 Oct 13 01:58 log.46676269._092746.job.log.1
[2025-10-13 01:58:32] -rw------- 1 boincer umatlas       357 Oct 13 01:58 output.list
[2025-10-13 01:58:32] -rw-r--r-- 1 boincer umatlas       620 Oct 13 01:58 runtime_log
[2025-10-13 01:58:32] -rw------- 1 boincer umatlas   1013760 Oct 13 01:58 result.tar.gz
[2025-10-13 01:58:32] -rw-r--r-- 1 boincer umatlas      8705 Oct 13 01:58 runtime_log.err
[2025-10-13 01:58:32] -rw------- 1 boincer umatlas       659 Oct 13 01:58 5B8LDm3BLS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmnKVMDmmRmA5m.diag
[2025-10-13 01:58:32] -rw-r--r-- 1 boincer umatlas     21901 Oct 13 01:58 stderr.txt
[2025-10-13 01:58:32] HITS file was successfully produced:
[2025-10-13 01:58:32] -rw------- 1 boincer umatlas 189069032 Oct 13 01:57 shared/HITS.pool.root.1
[2025-10-13 01:58:32]  *** Contents of shared directory: ***
[2025-10-13 01:58:32] total 400200
[2025-10-13 01:58:32] -rw-r--r-- 2 boincer umatlas 219120669 Oct 13 00:46 ATLAS.root_0
[2025-10-13 01:58:32] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 00:46 start_atlas.sh
[2025-10-13 01:58:32] -rw-r--r-- 2 boincer umatlas    569678 Oct 13 00:46 input.tar.gz
[2025-10-13 01:58:32] -rw------- 1 boincer umatlas 189069032 Oct 13 01:57 HITS.pool.root.1
[2025-10-13 01:58:32] -rw------- 1 boincer umatlas   1013760 Oct 13 01:58 result.tar.gz
01:58:34 (14512): run_atlas exited; CPU time 45057.930525
01:58:34 (14512): called boinc_finish(0)

</stderr_txt>
]]>

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