Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
16:26:20 (2509148): wrapper (7.7.26015): starting
16:26:20 (2509148): wrapper: running run_atlas (--nthreads 2)
[2025-10-13 16:26:20] Arguments: --nthreads 2
[2025-10-13 16:26:20] Threads: 2
[2025-10-13 16:26:20] Checking for CVMFS
[2025-10-13 16:26:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 16:26:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 16:26:20] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 16:26:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 16:26:20] 2.9.2.0 1188606 5772 62568 151664 3 57 34631866 36864001 0 130560 0 3477510 99.988 198129 713 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 16:26:20] CVMFS is ok
[2025-10-13 16:26:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 16:26:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 16:26:20] Further information can be found at the LHC@home message board.
[2025-10-13 16:26:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 16:26:20] Checking for apptainer binary...
[2025-10-13 16:26:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 16:26:20] Running /usr/bin/apptainer --version
[2025-10-13 16:26:21] apptainer version 1.4.1-1.1
[2025-10-13 16:26:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 16:26:21] magicA244
[2025-10-13 16:26:21] apptainer works
[2025-10-13 16:26:21] Set ATHENA_PROC_NUMBER=2
[2025-10-13 16:26:21] Set ATHENA_CORE_NUMBER=2
[2025-10-13 16:26:21] Starting ATLAS job with PandaID=6841068624
[2025-10-13 16:26:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 18:30:09]  *** The last 200 lines of the pilot log: ***
[2025-10-13 18:30:09] 2025-10-13 16:29:38,481 | INFO     | process IDs to be killed: [2519265] (in reverse order)
[2025-10-13 18:30:09] 2025-10-13 16:29:38,501 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 18:30:09] 2025-10-13 16:29:38,502 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 18:30:09] 2025-10-13 16:29:38,502 | INFO     | did not find any defunct processes belonging to 2519265
[2025-10-13 18:30:09] 2025-10-13 16:29:38,503 | INFO     | did not find any defunct processes belonging to 2519265
[2025-10-13 18:30:09] 2025-10-13 16:29:38,503 | INFO     | ready for new job
[2025-10-13 18:30:09] 2025-10-13 16:29:38,503 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 18:30:09] 2025-10-13 16:29:38,504 | INFO     | ***************************************
[2025-10-13 18:30:09] 2025-10-13 16:29:38,504 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 18:30:09] 2025-10-13 16:29:38,504 | INFO     | ***************************************
[2025-10-13 18:30:09] 2025-10-13 16:29:38,504 | INFO     | 
[2025-10-13 18:30:09] 2025-10-13 16:29:38,504 | INFO     | architecture information:
[2025-10-13 18:30:09] 2025-10-13 16:29:38,504 | INFO     | executing command: cat /etc/os-release
[2025-10-13 18:30:09] 2025-10-13 16:29:38,511 | INFO     | cat /etc/os-release:
[2025-10-13 18:30:09] NAME="CentOS Linux"
[2025-10-13 18:30:09] VERSION="7 (Core)"
[2025-10-13 18:30:09] ID="centos"
[2025-10-13 18:30:09] ID_LIKE="rhel fedora"
[2025-10-13 18:30:09] VERSION_ID="7"
[2025-10-13 18:30:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 18:30:09] ANSI_COLOR="0;31"
[2025-10-13 18:30:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 18:30:09] HOME_URL="https://www.centos.org/"
[2025-10-13 18:30:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 18:30:09] 
[2025-10-13 18:30:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 18:30:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 18:30:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 18:30:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 18:30:09] 
[2025-10-13 18:30:09] 2025-10-13 16:29:38,512 | INFO     | ***************************************
[2025-10-13 18:30:09] 2025-10-13 16:29:39,015 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-13 18:30:09] 2025-10-13 16:29:39,027 | INFO     | sufficient remaining disk space (489897852928 B)
[2025-10-13 18:30:09] 2025-10-13 16:29:39,027 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 18:30:09] 2025-10-13 16:29:39,027 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 18:30:09] 2025-10-13 16:29:39,027 | INFO     | update_server=False
[2025-10-13 18:30:09] 2025-10-13 16:29:39,027 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 18:30:09] 2025-10-13 16:29:39,027 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 18:30:09] 2025-10-13 16:29:39,027 | INFO     | aborting loop
[2025-10-13 18:30:09] 2025-10-13 16:29:39,027 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 18:30:09] 2025-10-13 16:29:39,027 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 18:30:09] 2025-10-13 16:29:39,028 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 18:30:09] 2025-10-13 16:29:39,162 | INFO     | all payload control threads have been joined
[2025-10-13 18:30:09] 2025-10-13 16:29:40,008 | INFO     | all data control threads have been joined
[2025-10-13 18:30:09] 2025-10-13 16:29:40,033 | INFO     | [job] retrieve thread has finished
[2025-10-13 18:30:09] 2025-10-13 16:29:40,034 | INFO     | [job] job monitor thread has finished
[2025-10-13 18:30:09] 2025-10-13 16:29:40,034 | INFO     | [job] queue monitor thread has finished
[2025-10-13 18:30:09] 2025-10-13 16:29:40,088 | INFO     | [data] copytool_in thread has finished
[2025-10-13 18:30:09] 2025-10-13 16:29:40,168 | INFO     | [payload] control thread has finished
[2025-10-13 18:30:09] 2025-10-13 16:29:40,586 | INFO     | [job] validate thread has finished
[2025-10-13 18:30:09] 2025-10-13 16:29:40,653 | INFO     | [payload] failed_post thread has finished
[2025-10-13 18:30:09] 2025-10-13 16:29:40,691 | INFO     | all job control threads have been joined
[2025-10-13 18:30:09] 2025-10-13 16:29:40,776 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 18:30:09] 2025-10-13 16:29:40,792 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 18:30:09] 2025-10-13 16:29:41,014 | INFO     | [data] control thread has finished
[2025-10-13 18:30:09] 2025-10-13 16:29:41,034 | INFO     | [data] copytool_out thread has finished
[2025-10-13 18:30:09] 2025-10-13 16:29:41,145 | INFO     | [payload] validate_post thread has finished
[2025-10-13 18:30:09] 2025-10-13 16:29:41,496 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 18:30:09] 2025-10-13 16:29:41,697 | INFO     | [job] control thread has finished
[2025-10-13 18:30:09] 2025-10-13 16:29:43,034 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 18:30:09] 2025-10-13 16:29:44,309 | INFO     | [monitor] cgroup control has ended
[2025-10-13 18:30:09] 2025-10-13 16:29:49,879 | INFO     | job.realtimelogging is not enabled
[2025-10-13 18:30:09] 2025-10-13 16:29:50,885 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 18:30:09] 2025-10-13 16:29:51,581 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139962100778816)>', '<ExcThread(monitor, started 139961164621568)>']
[2025-10-13 18:30:09] 2025-10-13 16:29:56,607 | INFO     | all workflow threads have been joined
[2025-10-13 18:30:09] 2025-10-13 16:29:56,608 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 18:30:09] 2025-10-13 16:29:56,608 | INFO     | traces error code: 0
[2025-10-13 18:30:09] 2025-10-13 16:29:56,608 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 18:30:09] 2025-10-13 16:30:09,149 | INFO     | PID=2512855 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 18:30:09] 2025-10-13 16:30:09,149 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 18:30:09] 2025-10-13 16:30:09,149 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 18:30:09] 2025-10-13 16:30:09,149 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 18:30:09] 2025-10-13 16:30:09,149 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 18:30:09] 2025-10-13 16:30:09,149 | INFO     | [monitor] control thread has ended
[2025-10-13 18:30:09] 2025-10-13 16:30:09,189 [wrapper] ==== pilot stdout END ====
[2025-10-13 18:30:09] 2025-10-13 16:30:09,192 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 18:30:09] 2025-10-13 16:30:09,194 [wrapper] pilotpid: 2512855
[2025-10-13 18:30:09] 2025-10-13 16:30:09,196 [wrapper] Pilot exit status: 0
[2025-10-13 18:30:09] 2025-10-13 16:30:09,201 [wrapper] pandaids: 6841068624
[2025-10-13 18:30:09] 2025-10-13 16:30:09,214 [wrapper] cleanup supervisor_pilot 2533633 2512856
[2025-10-13 18:30:09] 2025-10-13 16:30:09,216 [wrapper] Test setup, not cleaning
[2025-10-13 18:30:09] 2025-10-13 16:30:09,218 [wrapper] apfmon messages muted
[2025-10-13 18:30:09] 2025-10-13 16:30:09,220 [wrapper] ==== wrapper stdout END ====
[2025-10-13 18:30:09] 2025-10-13 16:30:09,222 [wrapper] ==== wrapper stderr END ====
[2025-10-13 18:30:09]  *** Error codes and diagnostics ***
[2025-10-13 18:30:09]     "exeErrorCode": 0,
[2025-10-13 18:30:09]     "exeErrorDiag": "",
[2025-10-13 18:30:09]     "pilotErrorCode": 0,
[2025-10-13 18:30:09]     "pilotErrorDiag": "",
[2025-10-13 18:30:09]  *** Listing of results directory ***
[2025-10-13 18:30:09] total 413192
[2025-10-13 18:30:09] -rw-r--r-- 1 boinc boinc    557409 Oct 13 02:02 pilot3.tar.gz
[2025-10-13 18:30:09] -rw-r--r-- 1 boinc boinc      5112 Oct 13 02:09 queuedata.json
[2025-10-13 18:30:09] -rwx------ 1 boinc boinc     36292 Oct 13 02:11 runpilot2-wrapper.sh
[2025-10-13 18:30:09] -rw-r--r-- 1 boinc boinc       100 Oct 13 16:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 18:30:09] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 16:26 run_atlas
[2025-10-13 18:30:09] -rw-r--r-- 1 boinc boinc       105 Oct 13 16:26 job.xml
[2025-10-13 18:30:09] -rw-r--r-- 2 boinc boinc 219615312 Oct 13 16:26 EVNT.46676267._002131.pool.root.1
[2025-10-13 18:30:09] drwxrwx--x 2 boinc boinc      4096 Oct 13 16:26 shared
[2025-10-13 18:30:09] -rw-r--r-- 2 boinc boinc    569686 Oct 13 16:26 input.tar.gz
[2025-10-13 18:30:09] -rw-r--r-- 2 boinc boinc     15120 Oct 13 16:26 start_atlas.sh
[2025-10-13 18:30:09] -rw-r--r-- 1 boinc boinc         0 Oct 13 16:26 boinc_setup_complete
[2025-10-13 18:30:09] -rw-r--r-- 1 boinc boinc      6209 Oct 13 16:26 init_data.xml
[2025-10-13 18:30:09] -rw-r--r-- 1 boinc boinc         0 Oct 13 16:26 boinc_lockfile
[2025-10-13 18:30:09] -rw-r--r-- 1 boinc boinc      2550 Oct 13 16:26 pandaJob.out
[2025-10-13 18:30:09] -rw------- 1 boinc boinc    972791 Oct 13 16:26 agis_schedconf.cvmfs.json
[2025-10-13 18:30:09] -rw------- 1 boinc boinc   1560580 Oct 13 16:26 agis_ddmendpoints.agis.ALL.json
[2025-10-13 18:30:09] drwx------ 5 boinc boinc      4096 Oct 13 16:26 pilot3
[2025-10-13 18:30:09] -rw------- 1 boinc boinc 196912090 Oct 13 18:29 HITS.46676269._092860.pool.root.1
[2025-10-13 18:30:09] -rw------- 1 boinc boinc        95 Oct 13 18:29 pilot_heartbeat.json
[2025-10-13 18:30:09] -rw-r--r-- 1 boinc boinc       529 Oct 13 18:29 boinc_task_state.xml
[2025-10-13 18:30:09] -rw------- 1 boinc boinc      1014 Oct 13 18:29 memory_monitor_summary.json
[2025-10-13 18:30:09] -rw------- 1 boinc boinc    279287 Oct 13 18:29 log.46676269._092860.job.log.tgz.1
[2025-10-13 18:30:09] -rw------- 1 boinc boinc      7762 Oct 13 18:29 heartbeat.json
[2025-10-13 18:30:09] -rw-r--r-- 1 boinc boinc      8192 Oct 13 18:29 boinc_mmap_file
[2025-10-13 18:30:09] -rw-r--r-- 1 boinc boinc        27 Oct 13 18:29 wrapper_checkpoint.txt
[2025-10-13 18:30:09] -rw------- 1 boinc boinc       747 Oct 13 18:30 pilotlog.txt
[2025-10-13 18:30:09] -rw------- 1 boinc boinc   1065191 Oct 13 18:30 log.46676269._092860.job.log.1
[2025-10-13 18:30:09] -rw------- 1 boinc boinc       357 Oct 13 18:30 output.list
[2025-10-13 18:30:09] -rw-r--r-- 1 boinc boinc       620 Oct 13 18:30 runtime_log
[2025-10-13 18:30:09] -rw------- 1 boinc boinc   1361920 Oct 13 18:30 result.tar.gz
[2025-10-13 18:30:09] -rw-r--r-- 1 boinc boinc      8792 Oct 13 18:30 runtime_log.err
[2025-10-13 18:30:09] -rw------- 1 boinc boinc       662 Oct 13 18:30 BdyKDm0KLS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm19lNDmpzrT8n.diag
[2025-10-13 18:30:09] -rw-r--r-- 1 boinc boinc     10180 Oct 13 18:30 stderr.txt
[2025-10-13 18:30:09] HITS file was successfully produced:
[2025-10-13 18:30:09] -rw------- 1 boinc boinc 196912090 Oct 13 18:29 shared/HITS.pool.root.1
[2025-10-13 18:30:09]  *** Contents of shared directory: ***
[2025-10-13 18:30:09] total 408688
[2025-10-13 18:30:09] -rw-r--r-- 2 boinc boinc 219615312 Oct 13 16:26 ATLAS.root_0
[2025-10-13 18:30:09] -rw-r--r-- 2 boinc boinc    569686 Oct 13 16:26 input.tar.gz
[2025-10-13 18:30:09] -rw-r--r-- 2 boinc boinc     15120 Oct 13 16:26 start_atlas.sh
[2025-10-13 18:30:09] -rw------- 1 boinc boinc 196912090 Oct 13 18:29 HITS.pool.root.1
[2025-10-13 18:30:09] -rw------- 1 boinc boinc   1361920 Oct 13 18:30 result.tar.gz
18:30:10 (2509148): run_atlas exited; CPU time 14315.178074
18:30:10 (2509148): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN