Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
16:44:19 (53752): wrapper (7.7.26015): starting
16:44:19 (53752): wrapper: running run_atlas (--nthreads 4)
[2025-10-13 16:44:19] Arguments: --nthreads 4
[2025-10-13 16:44:19] Threads: 4
[2025-10-13 16:44:19] Checking for CVMFS
[2025-10-13 16:44:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 16:44:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 16:44:19] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 16:44:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 16:44:19] 2.9.2.0 3212 141 56648 151664 2 57 33902111 36864000 0 130560 0 130896 99.996 5256 737 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 16:44:19] CVMFS is ok
[2025-10-13 16:44:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 16:44:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 16:44:19] Further information can be found at the LHC@home message board.
[2025-10-13 16:44:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 16:44:19] Checking for apptainer binary...
[2025-10-13 16:44:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 16:44:19] Running /usr/bin/apptainer --version
[2025-10-13 16:44:19] apptainer version 1.4.1-1.1
[2025-10-13 16:44:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 16:44:19] magicA250
[2025-10-13 16:44:19] apptainer works
[2025-10-13 16:44:19] Set ATHENA_PROC_NUMBER=4
[2025-10-13 16:44:19] Set ATHENA_CORE_NUMBER=4
[2025-10-13 16:44:19] Starting ATLAS job with PandaID=6840970354
[2025-10-13 16:44:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 17:55:59]  *** The last 200 lines of the pilot log: ***
[2025-10-13 17:55:59] 2025-10-13 15:55:28,573 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 17:55:59] 2025-10-13 15:55:28,574 | INFO     | did not find any defunct processes belonging to 64089
[2025-10-13 17:55:59] 2025-10-13 15:55:28,576 | INFO     | did not find any defunct processes belonging to 64089
[2025-10-13 17:55:59] 2025-10-13 15:55:28,576 | INFO     | ready for new job
[2025-10-13 17:55:59] 2025-10-13 15:55:28,576 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 17:55:59] 2025-10-13 15:55:28,576 | INFO     | ***************************************
[2025-10-13 17:55:59] 2025-10-13 15:55:28,576 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 17:55:59] 2025-10-13 15:55:28,576 | INFO     | ***************************************
[2025-10-13 17:55:59] 2025-10-13 15:55:28,576 | INFO     | 
[2025-10-13 17:55:59] 2025-10-13 15:55:28,577 | INFO     | architecture information:
[2025-10-13 17:55:59] 2025-10-13 15:55:28,577 | INFO     | executing command: cat /etc/os-release
[2025-10-13 17:55:59] 2025-10-13 15:55:28,591 | INFO     | cat /etc/os-release:
[2025-10-13 17:55:59] NAME="CentOS Linux"
[2025-10-13 17:55:59] VERSION="7 (Core)"
[2025-10-13 17:55:59] ID="centos"
[2025-10-13 17:55:59] ID_LIKE="rhel fedora"
[2025-10-13 17:55:59] VERSION_ID="7"
[2025-10-13 17:55:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 17:55:59] ANSI_COLOR="0;31"
[2025-10-13 17:55:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 17:55:59] HOME_URL="https://www.centos.org/"
[2025-10-13 17:55:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 17:55:59] 
[2025-10-13 17:55:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 17:55:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 17:55:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 17:55:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 17:55:59] 
[2025-10-13 17:55:59] 2025-10-13 15:55:28,591 | INFO     | ***************************************
[2025-10-13 17:55:59] 2025-10-13 15:55:29,095 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-13 17:55:59] 2025-10-13 15:55:29,111 | INFO     | sufficient remaining disk space (326031638528 B)
[2025-10-13 17:55:59] 2025-10-13 15:55:29,111 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 17:55:59] 2025-10-13 15:55:29,111 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 17:55:59] 2025-10-13 15:55:29,112 | INFO     | update_server=False
[2025-10-13 17:55:59] 2025-10-13 15:55:29,112 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 17:55:59] 2025-10-13 15:55:29,112 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 17:55:59] 2025-10-13 15:55:29,112 | INFO     | aborting loop
[2025-10-13 17:55:59] 2025-10-13 15:55:29,112 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 17:55:59] 2025-10-13 15:55:29,298 | INFO     | all payload control threads have been joined
[2025-10-13 17:55:59] 2025-10-13 15:55:29,369 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 17:55:59] 2025-10-13 15:55:29,987 | INFO     | all data control threads have been joined
[2025-10-13 17:55:59] 2025-10-13 15:55:30,117 | INFO     | [job] retrieve thread has finished
[2025-10-13 17:55:59] 2025-10-13 15:55:30,118 | INFO     | [job] job monitor thread has finished
[2025-10-13 17:55:59] 2025-10-13 15:55:30,118 | INFO     | [job] queue monitor thread has finished
[2025-10-13 17:55:59] 2025-10-13 15:55:30,274 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 17:55:59] 2025-10-13 15:55:30,298 | INFO     | [job] validate thread has finished
[2025-10-13 17:55:59] 2025-10-13 15:55:30,303 | INFO     | [payload] control thread has finished
[2025-10-13 17:55:59] 2025-10-13 15:55:30,523 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 17:55:59] 2025-10-13 15:55:30,534 | INFO     | [data] copytool_in thread has finished
[2025-10-13 17:55:59] 2025-10-13 15:55:30,679 | INFO     | [payload] validate_post thread has finished
[2025-10-13 17:55:59] 2025-10-13 15:55:30,693 | INFO     | all job control threads have been joined
[2025-10-13 17:55:59] 2025-10-13 15:55:30,750 | INFO     | [payload] failed_post thread has finished
[2025-10-13 17:55:59] 2025-10-13 15:55:30,993 | INFO     | [data] control thread has finished
[2025-10-13 17:55:59] 2025-10-13 15:55:31,236 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 17:55:59] 2025-10-13 15:55:31,375 | INFO     | [data] copytool_out thread has finished
[2025-10-13 17:55:59] 2025-10-13 15:55:31,441 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 17:55:59] 2025-10-13 15:55:31,699 | INFO     | [job] control thread has finished
[2025-10-13 17:55:59] 2025-10-13 15:55:31,998 | INFO     | [monitor] cgroup control has ended
[2025-10-13 17:55:59] 2025-10-13 15:55:35,243 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 17:55:59] 2025-10-13 15:55:40,002 | INFO     | job.realtimelogging is not enabled
[2025-10-13 17:55:59] 2025-10-13 15:55:41,008 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 17:55:59] 2025-10-13 15:55:42,734 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140637432948544)>', '<ExcThread(monitor, started 140636338509568)>']
[2025-10-13 17:55:59] 2025-10-13 15:55:47,760 | INFO     | all workflow threads have been joined
[2025-10-13 17:55:59] 2025-10-13 15:55:47,760 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 17:55:59] 2025-10-13 15:55:47,761 | INFO     | traces error code: 0
[2025-10-13 17:55:59] 2025-10-13 15:55:47,761 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 17:55:59] 2025-10-13 15:55:59,766 | INFO     | PID=57537 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-13 17:55:59] 2025-10-13 15:55:59,766 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 17:55:59] 2025-10-13 15:55:59,766 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 17:55:59] 2025-10-13 15:55:59,766 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 17:55:59] 2025-10-13 15:55:59,766 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 17:55:59] 2025-10-13 15:55:59,766 | INFO     | [monitor] control thread has ended
[2025-10-13 17:55:59] 2025-10-13 15:55:59,841 [wrapper] ==== pilot stdout END ====
[2025-10-13 17:55:59] 2025-10-13 15:55:59,846 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 17:55:59] 2025-10-13 15:55:59,850 [wrapper] pilotpid: 57537
[2025-10-13 17:55:59] 2025-10-13 15:55:59,854 [wrapper] Pilot exit status: 0
[2025-10-13 17:55:59] 2025-10-13 15:55:59,865 [wrapper] pandaids: 6840970354
[2025-10-13 17:55:59] 2025-10-13 15:55:59,888 [wrapper] cleanup supervisor_pilot   73859 57538
[2025-10-13 17:55:59] 2025-10-13 15:55:59,892 [wrapper] Test setup, not cleaning
[2025-10-13 17:55:59] 2025-10-13 15:55:59,896 [wrapper] apfmon messages muted
[2025-10-13 17:55:59] 2025-10-13 15:55:59,900 [wrapper] ==== wrapper stdout END ====
[2025-10-13 17:55:59] 2025-10-13 15:55:59,903 [wrapper] ==== wrapper stderr END ====
[2025-10-13 17:55:59]  *** Error codes and diagnostics ***
[2025-10-13 17:55:59]     "exeErrorCode": 0,
[2025-10-13 17:55:59]     "exeErrorDiag": "",
[2025-10-13 17:55:59]     "pilotErrorCode": 0,
[2025-10-13 17:55:59]     "pilotErrorDiag": "",
[2025-10-13 17:55:59]  *** Listing of results directory ***
[2025-10-13 17:55:59] total 408248
[2025-10-13 17:55:59] -rw-r--r-- 1 boinc boinc    557409 Oct 13 01:51 pilot3.tar.gz
[2025-10-13 17:55:59] -rw-r--r-- 1 boinc boinc      5112 Oct 13 01:57 queuedata.json
[2025-10-13 17:55:59] -rwx------ 1 boinc boinc     36292 Oct 13 01:58 runpilot2-wrapper.sh
[2025-10-13 17:55:59] -rw-r--r-- 1 boinc boinc       100 Oct 13 16:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 17:55:59] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 16:44 run_atlas
[2025-10-13 17:55:59] -rw-r--r-- 1 boinc boinc       105 Oct 13 16:44 job.xml
[2025-10-13 17:55:59] -rw-r--r-- 2 boinc boinc 223160393 Oct 13 16:44 EVNT.46676267._004676.pool.root.1
[2025-10-13 17:55:59] -rw-r--r-- 2 boinc boinc    569681 Oct 13 16:44 input.tar.gz
[2025-10-13 17:55:59] -rw-r--r-- 2 boinc boinc     15120 Oct 13 16:44 start_atlas.sh
[2025-10-13 17:55:59] drwxrwx--x 2 boinc boinc      4096 Oct 13 16:44 shared
[2025-10-13 17:55:59] -rw-r--r-- 1 boinc boinc         0 Oct 13 16:44 boinc_setup_complete
[2025-10-13 17:55:59] -rw-r--r-- 1 boinc boinc      6376 Oct 13 16:44 init_data.xml
[2025-10-13 17:55:59] -rw-r--r-- 1 boinc boinc         0 Oct 13 16:44 boinc_lockfile
[2025-10-13 17:55:59] -rw-r--r-- 1 boinc boinc      2550 Oct 13 16:44 pandaJob.out
[2025-10-13 17:55:59] -rw------- 1 boinc boinc    972791 Oct 13 16:44 agis_schedconf.cvmfs.json
[2025-10-13 17:55:59] -rw------- 1 boinc boinc   1560580 Oct 13 16:44 agis_ddmendpoints.agis.ALL.json
[2025-10-13 17:55:59] drwx------ 5 boinc boinc      4096 Oct 13 16:44 pilot3
[2025-10-13 17:55:59] -rw------- 1 boinc boinc 189186745 Oct 13 17:54 HITS.46676269._092691.pool.root.1
[2025-10-13 17:55:59] -rw-r--r-- 1 boinc boinc       529 Oct 13 17:55 boinc_task_state.xml
[2025-10-13 17:55:59] -rw------- 1 boinc boinc      1026 Oct 13 17:55 memory_monitor_summary.json
[2025-10-13 17:55:59] -rw------- 1 boinc boinc    274649 Oct 13 17:55 log.46676269._092691.job.log.tgz.1
[2025-10-13 17:55:59] -rw------- 1 boinc boinc      7778 Oct 13 17:55 heartbeat.json
[2025-10-13 17:55:59] -rw-r--r-- 1 boinc boinc      8192 Oct 13 17:55 boinc_mmap_file
[2025-10-13 17:55:59] -rw-r--r-- 1 boinc boinc        27 Oct 13 17:55 wrapper_checkpoint.txt
[2025-10-13 17:55:59] -rw------- 1 boinc boinc       745 Oct 13 17:55 pilotlog.txt
[2025-10-13 17:55:59] -rw------- 1 boinc boinc        95 Oct 13 17:55 pilot_heartbeat.json
[2025-10-13 17:55:59] -rw------- 1 boinc boinc    631099 Oct 13 17:55 log.46676269._092691.job.log.1
[2025-10-13 17:55:59] -rw------- 1 boinc boinc       357 Oct 13 17:55 output.list
[2025-10-13 17:55:59] -rw-r--r-- 1 boinc boinc       620 Oct 13 17:55 runtime_log
[2025-10-13 17:55:59] -rw------- 1 boinc boinc    921600 Oct 13 17:55 result.tar.gz
[2025-10-13 17:55:59] -rw-r--r-- 1 boinc boinc      8792 Oct 13 17:55 runtime_log.err
[2025-10-13 17:55:59] -rw------- 1 boinc boinc       661 Oct 13 17:55 h3YNDmq8KS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmf7lNDmAE9WFm.diag
[2025-10-13 17:55:59] -rw-r--r-- 1 boinc boinc      9939 Oct 13 17:55 stderr.txt
[2025-10-13 17:55:59] HITS file was successfully produced:
[2025-10-13 17:55:59] -rw------- 1 boinc boinc 189186745 Oct 13 17:54 shared/HITS.pool.root.1
[2025-10-13 17:55:59]  *** Contents of shared directory: ***
[2025-10-13 17:55:59] total 404172
[2025-10-13 17:55:59] -rw-r--r-- 2 boinc boinc 223160393 Oct 13 16:44 ATLAS.root_0
[2025-10-13 17:55:59] -rw-r--r-- 2 boinc boinc    569681 Oct 13 16:44 input.tar.gz
[2025-10-13 17:55:59] -rw-r--r-- 2 boinc boinc     15120 Oct 13 16:44 start_atlas.sh
[2025-10-13 17:55:59] -rw------- 1 boinc boinc 189186745 Oct 13 17:54 HITS.pool.root.1
[2025-10-13 17:55:59] -rw------- 1 boinc boinc    921600 Oct 13 17:55 result.tar.gz
17:56:01 (53752): run_atlas exited; CPU time 15907.838977
17:56:01 (53752): called boinc_finish(0)

</stderr_txt>
]]>

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