Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
06:38:40 (4103391): wrapper (7.7.26015): starting
06:38:40 (4103391): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 06:38:40] Arguments: --nthreads 8
[2025-10-13 06:38:40] Threads: 8
[2025-10-13 06:38:40] Checking for CVMFS
[2025-10-13 06:38:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 06:38:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 06:38:41] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 06:38:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 06:38:43] 2.11.5.0 4319 636 173960 151649 1 188 2677032 4194305 18974 130560 0 8929210 99.999 22884 317 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://127.0.0.1:3128 1
[2025-10-13 06:38:43] CVMFS is ok
[2025-10-13 06:38:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 06:38:43] Checking for apptainer binary...
[2025-10-13 06:38:43] apptainer is not installed, using version from CVMFS
[2025-10-13 06:38:43] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 06:38:44] mikemint-desktop
[2025-10-13 06:38:44] apptainer works
[2025-10-13 06:38:44] Set ATHENA_PROC_NUMBER=8
[2025-10-13 06:38:44] Set ATHENA_CORE_NUMBER=8
[2025-10-13 06:38:44] Starting ATLAS job with PandaID=6840970153
[2025-10-13 06:38:44] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/19 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 09:11:30]  *** The last 200 lines of the pilot log: ***
[2025-10-13 09:11:30] 2025-10-13 07:10:19,149 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 09:11:30] 2025-10-13 07:10:19,273 | INFO     | time since job start (9013s) is within the limit (172800.0s)
[2025-10-13 09:11:30] 2025-10-13 07:10:20,533 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 09:11:30] 2025-10-13 07:10:20,587 | INFO     | found 64 cores (64 cores per socket, 1 socket) HT, CPU MHz: 2353.11153125
[2025-10-13 09:11:30] 2025-10-13 07:10:20,661 | INFO     | using path: /var/lib/boinc-client/slots/19/PanDA_Pilot-6840970153/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 09:11:30] 2025-10-13 07:10:20,662 | INFO     | extracted standard info from prmon json
[2025-10-13 09:11:30] 2025-10-13 07:10:20,662 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 09:11:30] 2025-10-13 07:10:20,662 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 09:11:30] 2025-10-13 07:10:20,663 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 09:11:30] 2025-10-13 07:10:20,663 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 09:11:30] 2025-10-13 07:10:20,666 | INFO     | fitting pss+swap vs Time
[2025-10-13 09:11:30] 2025-10-13 07:10:20,666 | INFO     | sum of square deviations: 925859220.0
[2025-10-13 09:11:30] 2025-10-13 07:10:20,667 | INFO     | sum of deviations: 32834886874.0
[2025-10-13 09:11:30] 2025-10-13 07:10:20,667 | INFO     | mean x: 1760334963.5
[2025-10-13 09:11:30] 2025-10-13 07:10:20,667 | INFO     | mean y: 2401204.0833333335
[2025-10-13 09:11:30] 2025-10-13 07:10:20,667 | INFO     | -- intersect: -62426527663.60069
[2025-10-13 09:11:30] 2025-10-13 07:10:20,667 | INFO     | intersect: -62426527663.60069
[2025-10-13 09:11:30] 2025-10-13 07:10:20,668 | INFO     | chi2: 3.5755907976652677
[2025-10-13 09:11:30] 2025-10-13 07:10:20,668 | INFO     | sum of square deviations: 832722590.0
[2025-10-13 09:11:30] 2025-10-13 07:10:20,673 | INFO     | sum of deviations: 41220208564.0
[2025-10-13 09:11:30] 2025-10-13 07:10:20,673 | INFO     | mean x: 1760334811.0
[2025-10-13 09:11:30] 2025-10-13 07:10:20,673 | INFO     | mean y: 2414480.007194245
[2025-10-13 09:11:30] 2025-10-13 07:10:20,673 | INFO     | -- intersect: -87135089561.8725
[2025-10-13 09:11:30] 2025-10-13 07:10:20,674 | INFO     | intersect: -87135089561.8725
[2025-10-13 09:11:30] 2025-10-13 07:10:20,674 | INFO     | chi2: 2.7545885264132877
[2025-10-13 09:11:30] 2025-10-13 07:10:20,674 | INFO     | current chi2=2.7545885264132877 (change=22.961303955364944 %)
[2025-10-13 09:11:30] 2025-10-13 07:10:20,674 | INFO     | right removable region: 138
[2025-10-13 09:11:30] 2025-10-13 07:10:20,674 | INFO     | sum of square deviations: 832722590.0
[2025-10-13 09:11:30] 2025-10-13 07:10:20,675 | INFO     | sum of deviations: -1775085421.000001
[2025-10-13 09:11:30] 2025-10-13 07:10:20,675 | INFO     | mean x: 1760335116.0
[2025-10-13 09:11:30] 2025-10-13 07:10:20,675 | INFO     | mean y: 2457426.345323741
[2025-10-13 09:11:30] 2025-10-13 07:10:20,676 | INFO     | -- intersect: 3754901803.3928413
[2025-10-13 09:11:30] 2025-10-13 07:10:20,676 | INFO     | intersect: 3754901803.3928413
[2025-10-13 09:11:30] 2025-10-13 07:10:20,676 | INFO     | chi2: 0.9487383270356187
[2025-10-13 09:11:30] 2025-10-13 07:10:20,676 | INFO     | current chi2=0.9487383270356187 (change=73.46624989483945 %)
[2025-10-13 09:11:30] 2025-10-13 07:10:20,676 | INFO     | sum of square deviations: 746051197.5
[2025-10-13 09:11:30] 2025-10-13 07:10:20,681 | INFO     | sum of deviations: -7083027596.499999
[2025-10-13 09:11:30] 2025-10-13 07:10:20,682 | INFO     | mean x: 1760335268.5
[2025-10-13 09:11:30] 2025-10-13 07:10:20,682 | INFO     | mean y: 2466639.917910448
[2025-10-13 09:11:30] 2025-10-13 07:10:20,682 | INFO     | -- intersect: 16715131035.685112
[2025-10-13 09:11:30] 2025-10-13 07:10:20,682 | INFO     | intersect: 16715131035.685112
[2025-10-13 09:11:30] 2025-10-13 07:10:20,682 | INFO     | chi2: 0.874082287382236
[2025-10-13 09:11:30] 2025-10-13 07:10:20,682 | INFO     | current chi2=0.874082287382236 (change=7.868981101106059 %)
[2025-10-13 09:11:30] 2025-10-13 07:10:20,682 | INFO     | left removable region: 20
[2025-10-13 09:11:30] 2025-10-13 07:10:20,683 | INFO     | sum of square deviations: 509440249.5
[2025-10-13 09:11:30] 2025-10-13 07:10:20,683 | INFO     | sum of deviations: 1229537106.0
[2025-10-13 09:11:30] 2025-10-13 07:10:20,683 | INFO     | mean x: 1760335390.5
[2025-10-13 09:11:30] 2025-10-13 07:10:20,684 | INFO     | mean y: 2485119.7288135593
[2025-10-13 09:11:30] 2025-10-13 07:10:20,684 | INFO     | -- intersect: -4246094932.1006994
[2025-10-13 09:11:30] 2025-10-13 07:10:20,684 | INFO     | intersect: -4246094932.1006994
[2025-10-13 09:11:30] 2025-10-13 07:10:20,684 | INFO     | chi2: 0.0006161491825332584
[2025-10-13 09:11:30] 2025-10-13 07:10:20,684 | INFO     | -- intersect: -4246094932.1006994
[2025-10-13 09:11:30] 2025-10-13 07:10:20,684 | INFO     | current memory leak: 2.41 B/s (using 118 data points, chi2=0.00)
[2025-10-13 09:11:30] 2025-10-13 07:10:20,689 | INFO     | could have reported an average CPU frequency of 2364 MHz (8 samples)
[2025-10-13 09:11:30] 2025-10-13 07:10:20,689 | INFO     | ..............................
[2025-10-13 09:11:30] 2025-10-13 07:10:20,689 | INFO     | . Timing measurements:
[2025-10-13 09:11:30] 2025-10-13 07:10:20,689 | INFO     | . get job = 0 s
[2025-10-13 09:11:30] 2025-10-13 07:10:20,689 | INFO     | . initial setup = 2 s
[2025-10-13 09:11:30] 2025-10-13 07:10:20,689 | INFO     | . payload setup = 54 s
[2025-10-13 09:11:30] 2025-10-13 07:10:20,690 | INFO     | . stage-in = 0 s
[2025-10-13 09:11:30] 2025-10-13 07:10:20,690 | INFO     | . payload execution = 8800 s
[2025-10-13 09:11:30] 2025-10-13 07:10:20,690 | INFO     | . stage-out = 2 s
[2025-10-13 09:11:30] 2025-10-13 07:10:20,690 | INFO     | . log creation = 0 s
[2025-10-13 09:11:30] 2025-10-13 07:10:20,690 | INFO     | ..............................
[2025-10-13 09:11:30] 2025-10-13 07:10:21,281 | INFO     | time since job start (9015s) is within the limit (172800.0s)
[2025-10-13 09:11:30] 2025-10-13 07:10:21,389 | INFO     | 
[2025-10-13 09:11:30] 2025-10-13 07:10:21,389 | INFO     | job summary report
[2025-10-13 09:11:30] 2025-10-13 07:10:21,389 | INFO     | --------------------------------------------------
[2025-10-13 09:11:30] 2025-10-13 07:10:21,389 | INFO     | PanDA job id: 6840970153
[2025-10-13 09:11:30] 2025-10-13 07:10:21,389 | INFO     | task id: 46676269
[2025-10-13 09:11:30] 2025-10-13 07:10:21,390 | INFO     | errors: (none)
[2025-10-13 09:11:30] 2025-10-13 07:10:21,390 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 09:11:30] 2025-10-13 07:10:21,390 | INFO     | pilot state: finished 
[2025-10-13 09:11:30] 2025-10-13 07:10:21,390 | INFO     | transexitcode: 0
[2025-10-13 09:11:30] 2025-10-13 07:10:21,390 | INFO     | exeerrorcode: 0
[2025-10-13 09:11:30] 2025-10-13 07:10:21,390 | INFO     | exeerrordiag: 
[2025-10-13 09:11:30] 2025-10-13 07:10:21,390 | INFO     | exitcode: 0
[2025-10-13 09:11:30] 2025-10-13 07:10:21,390 | INFO     | exitmsg: OK
[2025-10-13 09:11:30] 2025-10-13 07:10:21,390 | INFO     | cpuconsumptiontime: 45212 s
[2025-10-13 09:11:30] 2025-10-13 07:10:21,390 | INFO     | nevents: 400
[2025-10-13 09:11:30] 2025-10-13 07:10:21,390 | INFO     | neventsw: 0
[2025-10-13 09:11:30] 2025-10-13 07:10:21,391 | INFO     | pid: 4157855
[2025-10-13 09:11:30] 2025-10-13 07:10:21,391 | INFO     | pgrp: 4157855
[2025-10-13 09:11:30] 2025-10-13 07:10:21,391 | INFO     | corecount: 8
[2025-10-13 09:11:30] 2025-10-13 07:10:21,391 | INFO     | event service: False
[2025-10-13 09:11:30] 2025-10-13 07:10:21,391 | INFO     | sizes: {0: 2348694, 1: 2348893, 12: 2348893, 23: 2348921, 34: 2348949, 36: 2349239, 44: 2349395, 8859: 2377683, 8860: 2377682, 8863: 2386752, 8865: 2386808, 8916: 
[2025-10-13 09:11:30] 2025-10-13 07:10:21,391 | INFO     | --------------------------------------------------
[2025-10-13 09:11:30] 2025-10-13 07:10:21,391 | INFO     | 
[2025-10-13 09:11:30] 2025-10-13 07:10:21,391 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/19
[2025-10-13 09:11:30] 2025-10-13 07:10:21,649 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 09:11:30] 2025-10-13 07:10:21,650 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 09:11:30] 2025-10-13 07:10:21,650 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 09:11:30] 2025-10-13 07:10:21,650 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 09:11:30] 2025-10-13 07:10:21,650 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 09:11:30] 2025-10-13 07:10:21,650 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 09:11:30] 2025-10-13 07:10:21,650 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 09:11:30] 2025-10-13 07:10:21,651 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 09:11:30] 2025-10-13 07:10:21,651 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 09:11:30] 2025-10-13 07:10:21,651 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 09:11:30] 2025-10-13 07:10:21,651 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 09:11:30] 2025-10-13 07:10:21,651 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 09:11:30] 2025-10-13 07:10:21,651 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 09:11:30] 2025-10-13 07:10:21,651 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 09:11:30] 2025-10-13 07:10:21,651 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 09:11:30] 2025-10-13 07:10:21,651 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 09:11:30] 2025-10-13 07:10:21,652 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 09:11:30] 2025-10-13 07:10:21,652 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 09:11:30] 2025-10-13 07:10:21,652 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 09:11:30] 2025-10-13 07:10:21,652 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 09:11:30] 2025-10-13 07:10:21,652 | INFO     | job 6840970153 has completed (purged errors)
[2025-10-13 09:11:30] 2025-10-13 07:10:21,652 | INFO     | overall cleanup function is called
[2025-10-13 09:11:30] 2025-10-13 07:10:22,665 | INFO     | --- collectZombieJob: --- 10, [4157855]
[2025-10-13 09:11:30] 2025-10-13 07:10:22,665 | INFO     | zombie collector waiting for pid 4157855
[2025-10-13 09:11:30] 2025-10-13 07:10:22,665 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 09:11:30] 2025-10-13 07:10:22,665 | INFO     | collected zombie processes
[2025-10-13 09:11:30] 2025-10-13 07:10:22,666 | INFO     | will attempt to kill all subprocesses of pid=4157855
[2025-10-13 09:11:30] 2025-10-13 07:10:23,774 | INFO     | process IDs to be killed: [4157855] (in reverse order)
[2025-10-13 09:11:30] 2025-10-13 07:10:26,246 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 09:11:30] 2025-10-13 07:10:26,246 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 09:11:30] 2025-10-13 07:10:26,286 | INFO     | did not find any defunct processes belonging to 4157855
[2025-10-13 09:11:30] 2025-10-13 07:10:26,321 | INFO     | did not find any defunct processes belonging to 4157855
[2025-10-13 09:11:30] 2025-10-13 07:10:26,322 | INFO     | ready for new job
[2025-10-13 09:11:30] 2025-10-13 07:10:26,322 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 09:11:30] 2025-10-13 07:10:26,324 | INFO     | ***************************************
[2025-10-13 09:11:30] 2025-10-13 07:10:26,324 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 09:11:30] 2025-10-13 07:10:26,324 | INFO     | ***************************************
[2025-10-13 09:11:30] 2025-10-13 07:10:26,324 | INFO     | 
[2025-10-13 09:11:30] 2025-10-13 07:10:26,348 | INFO     | architecture information:
[2025-10-13 09:11:30] 2025-10-13 07:10:26,361 | INFO     | executing command: cat /etc/os-release
[2025-10-13 09:11:30] 2025-10-13 07:10:26,481 | INFO     | cat /etc/os-release:
[2025-10-13 09:11:30] NAME="CentOS Linux"
[2025-10-13 09:11:30] VERSION="7 (Core)"
[2025-10-13 09:11:30] ID="centos"
[2025-10-13 09:11:30] ID_LIKE="rhel fedora"
[2025-10-13 09:11:30] VERSION_ID="7"
[2025-10-13 09:11:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 09:11:30] ANSI_COLOR="0;31"
[2025-10-13 09:11:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 09:11:30] HOME_URL="https://www.centos.org/"
[2025-10-13 09:11:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 09:11:30] 
[2025-10-13 09:11:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 09:11:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 09:11:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 09:11:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 09:11:30] 
[2025-10-13 09:11:30] 2025-10-13 07:10:26,482 | INFO     | ***************************************
[2025-10-13 09:11:30] 2025-10-13 07:10:26,985 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/19
[2025-10-13 09:11:30] 2025-10-13 07:10:27,115 | INFO     | sufficient remaining disk space (194362998784 B)
[2025-10-13 09:11:30] 2025-10-13 07:10:27,116 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 09:11:30] 2025-10-13 07:10:27,116 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 09:11:30] 2025-10-13 07:10:27,116 | INFO     | update_server=False
[2025-10-13 09:11:30] 2025-10-13 07:10:27,116 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 09:11:30] 2025-10-13 07:10:27,116 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 09:11:30] 2025-10-13 07:10:27,229 | INFO     | all job control threads have been joined
[2025-10-13 09:11:30] 2025-10-13 07:10:27,393 | INFO     | all payload control threads have been joined
[2025-10-13 09:11:30] 2025-10-13 07:10:27,701 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 09:11:30] 2025-10-13 07:10:27,701 | INFO     | aborting loop
[2025-10-13 09:11:30] 2025-10-13 07:10:27,865 | INFO     | all data control threads have been joined
[2025-10-13 09:11:30] 2025-10-13 07:10:28,121 | INFO     | [job] retrieve thread has finished
[2025-10-13 09:11:30] 2025-10-13 07:10:28,233 | INFO     | [job] control thread has finished
[2025-10-13 09:11:30] 2025-10-13 07:10:28,241 | INFO     | [data] copytool_in thread has finished
[2025-10-13 09:11:30] 2025-10-13 07:10:28,245 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 09:11:30] 2025-10-13 07:10:28,397 | INFO     | [payload] control thread has finished
[2025-10-13 09:11:30] 2025-10-13 07:10:28,705 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 09:11:30] 2025-10-13 07:10:28,706 | INFO     | [job] validate thread has finished
[2025-10-13 09:11:30] 2025-10-13 07:10:28,706 | INFO     | [job] job monitor thread has finished
[2025-10-13 09:11:30] 2025-10-13 07:10:28,773 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 09:11:30] 2025-10-13 07:10:28,873 | INFO     | [data] control thread has finished
[2025-10-13 09:11:30] 2025-10-13 07:10:29,069 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 09:11:30] 2025-10-13 07:10:29,125 | INFO     | [data] copytool_out thread has finished
[2025-10-13 09:11:30] 2025-10-13 07:10:29,149 | INFO     | [payload] failed_post thread has finished
[2025-10-13 09:11:30] 2025-10-13 07:10:29,153 | INFO     | [payload] validate_post thread has finished
[2025-10-13 09:11:30] 2025-10-13 07:10:29,965 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 09:11:30] 2025-10-13 07:10:30,421 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 09:11:30] 2025-10-13 07:10:30,973 | INFO     | [job] queue monitor thread has finished
[2025-10-13 09:11:30] 2025-10-13 07:10:34,437 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 09:11:30] 2025-10-13 07:10:55,747 | INFO     | PID=4120301 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 09:11:30] 2025-10-13 07:10:55,748 | INFO     | .. there are 25 such processes running
[2025-10-13 09:11:30] 2025-10-13 07:10:55,748 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 09:11:30] 2025-10-13 07:10:55,749 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 09:11:30] 2025-10-13 07:10:55,749 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 09:11:30] 2025-10-13 07:11:21,469 | INFO     | [monitor] cgroup control has ended
[2025-10-13 09:11:30] 2025-10-13 07:11:23,193 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139916247852864)>', '<ExcThread(monitor, started 139916020815616)>']
[2025-10-13 09:11:30] 2025-10-13 07:11:23,897 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 09:11:30] 2025-10-13 07:11:23,897 | INFO     | [monitor] control thread has ended
[2025-10-13 09:11:30] 2025-10-13 07:11:28,217 | INFO     | all workflow threads have been joined
[2025-10-13 09:11:30] 2025-10-13 07:11:28,217 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 09:11:30] 2025-10-13 07:11:28,217 | INFO     | traces error code: 0
[2025-10-13 09:11:30] 2025-10-13 07:11:28,218 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 09:11:30] 2025-10-13 07:11:28,573 [wrapper] ==== pilot stdout END ====
[2025-10-13 09:11:30] 2025-10-13 07:11:28,609 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 09:11:30] 2025-10-13 07:11:28,657 [wrapper] pilotpid: 4120301
[2025-10-13 09:11:30] 2025-10-13 07:11:28,713 [wrapper] Pilot exit status: 0
[2025-10-13 09:11:30] 2025-10-13 07:11:28,889 [wrapper] pandaids: 6840970153
[2025-10-13 09:11:30] 2025-10-13 07:11:29,329 [wrapper] cleanup supervisor_pilot  686789 4120302
[2025-10-13 09:11:30] 2025-10-13 07:11:29,389 [wrapper] Test setup, not cleaning
[2025-10-13 09:11:30] 2025-10-13 07:11:29,449 [wrapper] apfmon messages muted
[2025-10-13 09:11:30] 2025-10-13 07:11:29,474 [wrapper] ==== wrapper stdout END ====
[2025-10-13 09:11:30] 2025-10-13 07:11:29,478 [wrapper] ==== wrapper stderr END ====
[2025-10-13 09:11:30]  *** Error codes and diagnostics ***
[2025-10-13 09:11:30]     "exeErrorCode": 0,
[2025-10-13 09:11:30]     "exeErrorDiag": "",
[2025-10-13 09:11:30]     "pilotErrorCode": 0,
[2025-10-13 09:11:30]     "pilotErrorDiag": "",
[2025-10-13 09:11:30]  *** Listing of results directory ***
[2025-10-13 09:11:30] insgesamt 411340
[2025-10-13 09:11:30] -rw-r--r-- 1 boinc boinc    557409 Okt 13 01:51 pilot3.tar.gz
[2025-10-13 09:11:30] -rwx------ 1 boinc boinc     36292 Okt 13 01:57 runpilot2-wrapper.sh
[2025-10-13 09:11:30] -rw-r--r-- 1 boinc boinc      5112 Okt 13 01:57 queuedata.json
[2025-10-13 09:11:30] -rw-r--r-- 1 boinc boinc       100 Okt 13 06:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 09:11:30] -rwxr-xr-x 1 boinc boinc      7986 Okt 13 06:38 run_atlas
[2025-10-13 09:11:30] -rw-r--r-- 1 boinc boinc       105 Okt 13 06:38 job.xml
[2025-10-13 09:11:30] -rw-r--r-- 2 boinc boinc 219965991 Okt 13 06:38 EVNT.46676267._004672.pool.root.1
[2025-10-13 09:11:30] -rw-r--r-- 2 boinc boinc     15120 Okt 13 06:38 start_atlas.sh
[2025-10-13 09:11:30] drwxrwx--x 2 boinc boinc      4096 Okt 13 06:38 shared
[2025-10-13 09:11:30] -rw-r--r-- 2 boinc boinc    569679 Okt 13 06:38 input.tar.gz
[2025-10-13 09:11:30] -rw-r--r-- 1 boinc boinc      6667 Okt 13 06:38 init_data.xml
[2025-10-13 09:11:30] -rw-r--r-- 1 boinc boinc         0 Okt 13 06:38 boinc_lockfile
[2025-10-13 09:11:30] -rw-r--r-- 1 boinc boinc      2550 Okt 13 06:38 pandaJob.out
[2025-10-13 09:11:30] -rw------- 1 boinc boinc    974365 Okt 13 06:40 agis_schedconf.cvmfs.json
[2025-10-13 09:11:30] -rw------- 1 boinc boinc   1560580 Okt 13 06:40 agis_ddmendpoints.agis.ALL.json
[2025-10-13 09:11:30] drwx------ 5 boinc boinc      4096 Okt 13 06:40 pilot3
[2025-10-13 09:11:30] -rw------- 1 boinc boinc 194177351 Okt 13 09:08 HITS.46676269._092573.pool.root.1
[2025-10-13 09:11:30] -rw-r--r-- 1 boinc boinc       530 Okt 13 09:08 boinc_task_state.xml
[2025-10-13 09:11:30] -rw------- 1 boinc boinc      1027 Okt 13 09:09 memory_monitor_summary.json
[2025-10-13 09:11:30] -rw------- 1 boinc boinc    370655 Okt 13 09:09 log.46676269._092573.job.log.tgz.1
[2025-10-13 09:11:30] -rw------- 1 boinc boinc      7755 Okt 13 09:10 heartbeat.json
[2025-10-13 09:11:30] -rw------- 1 boinc boinc        95 Okt 13 09:10 pilot_heartbeat.json
[2025-10-13 09:11:30] -rw-r--r-- 1 boinc boinc        27 Okt 13 09:11 wrapper_checkpoint.txt
[2025-10-13 09:11:30] -rw-r--r-- 1 boinc boinc      8192 Okt 13 09:11 boinc_mmap_file
[2025-10-13 09:11:30] -rw------- 1 boinc boinc      4833 Okt 13 09:11 pilotlog.txt
[2025-10-13 09:11:30] -rw------- 1 boinc boinc   1208645 Okt 13 09:11 log.46676269._092573.job.log.1
[2025-10-13 09:11:30] -rw------- 1 boinc boinc       357 Okt 13 09:11 output.list
[2025-10-13 09:11:30] -rw-r--r-- 1 boinc boinc       620 Okt 13 09:11 runtime_log
[2025-10-13 09:11:30] -rw------- 1 boinc boinc   1597440 Okt 13 09:11 result.tar.gz
[2025-10-13 09:11:30] -rw-r--r-- 1 boinc boinc      8856 Okt 13 09:11 runtime_log.err
[2025-10-13 09:11:30] -rw------- 1 boinc boinc       664 Okt 13 09:11 4qTNDmr7KS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmqJVMDmTpflvn.diag
[2025-10-13 09:11:30] -rw-r--r-- 1 boinc boinc     20900 Okt 13 09:11 stderr.txt
[2025-10-13 09:11:30] HITS file was successfully produced:
[2025-10-13 09:11:30] -rw------- 1 boinc boinc 194177351 Okt 13 09:08 shared/HITS.pool.root.1
[2025-10-13 09:11:30]  *** Contents of shared directory: ***
[2025-10-13 09:11:30] insgesamt 406584
[2025-10-13 09:11:30] -rw-r--r-- 2 boinc boinc 219965991 Okt 13 06:38 ATLAS.root_0
[2025-10-13 09:11:30] -rw-r--r-- 2 boinc boinc     15120 Okt 13 06:38 start_atlas.sh
[2025-10-13 09:11:30] -rw-r--r-- 2 boinc boinc    569679 Okt 13 06:38 input.tar.gz
[2025-10-13 09:11:30] -rw------- 1 boinc boinc 194177351 Okt 13 09:08 HITS.pool.root.1
[2025-10-13 09:11:30] -rw------- 1 boinc boinc   1597440 Okt 13 09:11 result.tar.gz
09:11:31 (4103391): run_atlas exited; CPU time 45757.835296
09:11:31 (4103391): called boinc_finish(0)

</stderr_txt>
]]>

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