Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
01:36:04 (2828147): wrapper (7.7.26015): starting
01:36:04 (2828147): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 01:36:04] Arguments: --nthreads 8
[2025-10-13 01:36:04] Threads: 8
[2025-10-13 01:36:04] Checking for CVMFS
[2025-10-13 01:36:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 01:36:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 01:36:04] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 01:36:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 01:36:04] 2.13.1.0 4140 5265 70488 151650 3 57 36062082 39288833 2030 16776704 0 17483351 99.997 179397 35045 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 01:36:04] CVMFS is ok
[2025-10-13 01:36:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 01:36:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 01:36:04] Further information can be found at the LHC@home message board.
[2025-10-13 01:36:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 01:36:04] Checking for apptainer binary...
[2025-10-13 01:36:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 01:36:04] Running /usr/bin/apptainer --version
[2025-10-13 01:36:04] apptainer version 1.4.3-1.el9
[2025-10-13 01:36:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 01:36:04] c-210-16.aglt2.org
[2025-10-13 01:36:04] apptainer works
[2025-10-13 01:36:04] Set ATHENA_PROC_NUMBER=8
[2025-10-13 01:36:04] Set ATHENA_CORE_NUMBER=8
[2025-10-13 01:36:04] Starting ATLAS job with PandaID=6840970172
[2025-10-13 01:36:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 02:43:22]  *** The last 200 lines of the pilot log: ***
[2025-10-13 02:43:22]  protocol_id=None
[2025-10-13 02:43:22]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-13 02:43:22]  replicas=None
[2025-10-13 02:43:22]  scope=mc23_13p6TeV
[2025-10-13 02:43:22]  status=None
[2025-10-13 02:43:22]  status_code=0
[2025-10-13 02:43:22]  storage_token=
[2025-10-13 02:43:22]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6840970172/log.46676269._092592.job.log.tgz.1
[2025-10-13 02:43:22]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/42/d6/log.46676269._092592.job.log.tgz.1
[2025-10-13 02:43:22]  workdir=None
[2025-10-13 02:43:22] ]
[2025-10-13 02:43:22] 2025-10-13 06:42:32,988 | INFO     | transferring file log.46676269._092592.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6840970172/log.46676269._092592.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-13 02:43:22] 2025-10-13 06:42:32,988 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6840970172/log.46676269._092592.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._092592.job
[2025-10-13 02:43:22] 2025-10-13 06:42:33,000 | INFO     | adding to output.list: log.46676269._092592.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/42/d6/log.46676269._092592.job.log.tg
[2025-10-13 02:43:22] 2025-10-13 06:42:33,000 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 02:43:22] 2025-10-13 06:42:33,001 | INFO     | summary of transferred files:
[2025-10-13 02:43:22] 2025-10-13 06:42:33,001 | INFO     |  -- lfn=log.46676269._092592.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 02:43:22] 2025-10-13 06:42:33,001 | INFO     | stage-out finished correctly
[2025-10-13 02:43:22] 2025-10-13 06:42:33,158 | INFO     | time since job start (3981s) is within the limit (172800.0s)
[2025-10-13 02:43:22] 2025-10-13 06:42:35,038 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 02:43:22] 2025-10-13 06:42:35,164 | INFO     | time since job start (3983s) is within the limit (172800.0s)
[2025-10-13 02:43:22] 2025-10-13 06:42:35,774 | INFO     | job 6840970172 has state=finished
[2025-10-13 02:43:22] 2025-10-13 06:42:35,774 | INFO     | preparing for final server update for job 6840970172 in state='finished'
[2025-10-13 02:43:22] 2025-10-13 06:42:35,774 | INFO     | this job has now completed (state=finished)
[2025-10-13 02:43:22] 2025-10-13 06:42:35,775 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 02:43:22] 2025-10-13 06:42:35,775 | INFO     | log transfer has been attempted: DONE
[2025-10-13 02:43:22] 2025-10-13 06:42:35,775 | INFO     | job 6840970172 has finished - writing final server update
[2025-10-13 02:43:22] 2025-10-13 06:42:35,775 | INFO     | total number of processed events: 400 (read)
[2025-10-13 02:43:22] 2025-10-13 06:42:35,776 | INFO     | executing command: lscpu
[2025-10-13 02:43:22] 2025-10-13 06:42:35,801 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 02:43:22] 2025-10-13 06:42:36,739 | WARNING  | process 2838260 can no longer be monitored (due to stat problems) - aborting
[2025-10-13 02:43:22] 2025-10-13 06:42:36,739 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6840970172/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 02:43:22] 2025-10-13 06:42:36,862 | INFO     | number of running child processes to parent process 2838260: 1
[2025-10-13 02:43:22] 2025-10-13 06:42:36,862 | INFO     | maximum number of monitored processes: 6
[2025-10-13 02:43:22] 2025-10-13 06:42:37,169 | INFO     | time since job start (3985s) is within the limit (172800.0s)
[2025-10-13 02:43:22] 2025-10-13 06:42:38,076 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 02:43:22] 2025-10-13 06:42:38,080 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2820.080025
[2025-10-13 02:43:22] 2025-10-13 06:42:38,083 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6840970172/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 02:43:22] 2025-10-13 06:42:38,083 | INFO     | extracted standard info from prmon json
[2025-10-13 02:43:22] 2025-10-13 06:42:38,084 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 02:43:22] 2025-10-13 06:42:38,084 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 02:43:22] 2025-10-13 06:42:38,084 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 02:43:22] 2025-10-13 06:42:38,084 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 02:43:22] 2025-10-13 06:42:38,085 | INFO     | fitting pss+swap vs Time
[2025-10-13 02:43:22] 2025-10-13 06:42:38,085 | INFO     | sum of square deviations: 60482994.5
[2025-10-13 02:43:22] 2025-10-13 06:42:38,085 | INFO     | sum of deviations: -6436028016.0
[2025-10-13 02:43:22] 2025-10-13 06:42:38,085 | INFO     | mean x: 1760335836.5
[2025-10-13 02:43:22] 2025-10-13 06:42:38,085 | INFO     | mean y: 2734481.172413793
[2025-10-13 02:43:22] 2025-10-13 06:42:38,086 | INFO     | -- intersect: 187321018817.8184
[2025-10-13 02:43:22] 2025-10-13 06:42:38,086 | INFO     | intersect: 187321018817.8184
[2025-10-13 02:43:22] 2025-10-13 06:42:38,086 | INFO     | chi2: 0.022548151170934425
[2025-10-13 02:43:22] 2025-10-13 06:42:38,086 | INFO     | -- intersect: 187321018817.8184
[2025-10-13 02:43:22] 2025-10-13 06:42:38,086 | INFO     | current memory leak: -106.41 B/s (using 58 data points, chi2=0.02)
[2025-10-13 02:43:22] 2025-10-13 06:42:38,086 | INFO     | could have reported an average CPU frequency of 2739 MHz (6 samples)
[2025-10-13 02:43:22] 2025-10-13 06:42:38,086 | INFO     | ..............................
[2025-10-13 02:43:22] 2025-10-13 06:42:38,086 | INFO     | . Timing measurements:
[2025-10-13 02:43:22] 2025-10-13 06:42:38,086 | INFO     | . get job = 0 s
[2025-10-13 02:43:22] 2025-10-13 06:42:38,086 | INFO     | . initial setup = 2 s
[2025-10-13 02:43:22] 2025-10-13 06:42:38,086 | INFO     | . payload setup = 3 s
[2025-10-13 02:43:22] 2025-10-13 06:42:38,087 | INFO     | . stage-in = 0 s
[2025-10-13 02:43:22] 2025-10-13 06:42:38,087 | INFO     | . payload execution = 3957 s
[2025-10-13 02:43:22] 2025-10-13 06:42:38,087 | INFO     | . stage-out = 0 s
[2025-10-13 02:43:22] 2025-10-13 06:42:38,087 | INFO     | . log creation = 0 s
[2025-10-13 02:43:22] 2025-10-13 06:42:38,087 | INFO     | ..............................
[2025-10-13 02:43:22] 2025-10-13 06:42:38,142 | INFO     | 
[2025-10-13 02:43:22] 2025-10-13 06:42:38,142 | INFO     | job summary report
[2025-10-13 02:43:22] 2025-10-13 06:42:38,142 | INFO     | --------------------------------------------------
[2025-10-13 02:43:22] 2025-10-13 06:42:38,143 | INFO     | PanDA job id: 6840970172
[2025-10-13 02:43:22] 2025-10-13 06:42:38,143 | INFO     | task id: 46676269
[2025-10-13 02:43:22] 2025-10-13 06:42:38,143 | INFO     | errors: (none)
[2025-10-13 02:43:22] 2025-10-13 06:42:38,143 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 02:43:22] 2025-10-13 06:42:38,143 | INFO     | pilot state: finished 
[2025-10-13 02:43:22] 2025-10-13 06:42:38,143 | INFO     | transexitcode: 0
[2025-10-13 02:43:22] 2025-10-13 06:42:38,143 | INFO     | exeerrorcode: 0
[2025-10-13 02:43:22] 2025-10-13 06:42:38,143 | INFO     | exeerrordiag: 
[2025-10-13 02:43:22] 2025-10-13 06:42:38,143 | INFO     | exitcode: 0
[2025-10-13 02:43:22] 2025-10-13 06:42:38,143 | INFO     | exitmsg: OK
[2025-10-13 02:43:22] 2025-10-13 06:42:38,143 | INFO     | cpuconsumptiontime: 29069 s
[2025-10-13 02:43:22] 2025-10-13 06:42:38,143 | INFO     | nevents: 400
[2025-10-13 02:43:22] 2025-10-13 06:42:38,143 | INFO     | neventsw: 0
[2025-10-13 02:43:22] 2025-10-13 06:42:38,143 | INFO     | pid: 2838260
[2025-10-13 02:43:22] 2025-10-13 06:42:38,143 | INFO     | pgrp: 2838260
[2025-10-13 02:43:22] 2025-10-13 06:42:38,143 | INFO     | corecount: 8
[2025-10-13 02:43:22] 2025-10-13 06:42:38,143 | INFO     | event service: False
[2025-10-13 02:43:22] 2025-10-13 06:42:38,143 | INFO     | sizes: {0: 2348630, 1: 2348885, 3: 2349147, 11: 2349175, 3965: 2375103, 3967: 2384101, 3969: 2384285, 3972: 2384479}
[2025-10-13 02:43:22] 2025-10-13 06:42:38,144 | INFO     | --------------------------------------------------
[2025-10-13 02:43:22] 2025-10-13 06:42:38,144 | INFO     | 
[2025-10-13 02:43:22] 2025-10-13 06:42:38,144 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 02:43:22] 2025-10-13 06:42:38,155 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 02:43:22] 2025-10-13 06:42:38,155 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 02:43:22] 2025-10-13 06:42:38,155 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 02:43:22] 2025-10-13 06:42:38,156 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 02:43:22] 2025-10-13 06:42:38,156 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 02:43:22] 2025-10-13 06:42:38,156 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 02:43:22] 2025-10-13 06:42:38,156 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 02:43:22] 2025-10-13 06:42:38,156 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 02:43:22] 2025-10-13 06:42:38,156 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 02:43:22] 2025-10-13 06:42:38,156 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 02:43:22] 2025-10-13 06:42:38,156 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 02:43:22] 2025-10-13 06:42:38,156 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 02:43:22] 2025-10-13 06:42:38,156 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 02:43:22] 2025-10-13 06:42:38,156 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 02:43:22] 2025-10-13 06:42:38,156 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 02:43:22] 2025-10-13 06:42:38,156 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 02:43:22] 2025-10-13 06:42:38,156 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 02:43:22] 2025-10-13 06:42:38,156 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 02:43:22] 2025-10-13 06:42:38,156 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 02:43:22] 2025-10-13 06:42:38,157 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 02:43:22] 2025-10-13 06:42:38,157 | INFO     | job 6840970172 has completed (purged errors)
[2025-10-13 02:43:22] 2025-10-13 06:42:38,157 | INFO     | overall cleanup function is called
[2025-10-13 02:43:22] 2025-10-13 06:42:39,163 | INFO     | --- collectZombieJob: --- 10, [2838260]
[2025-10-13 02:43:22] 2025-10-13 06:42:39,163 | INFO     | zombie collector waiting for pid 2838260
[2025-10-13 02:43:22] 2025-10-13 06:42:39,163 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 02:43:22] 2025-10-13 06:42:39,163 | INFO     | collected zombie processes
[2025-10-13 02:43:22] 2025-10-13 06:42:39,163 | INFO     | will attempt to kill all subprocesses of pid=2838260
[2025-10-13 02:43:22] 2025-10-13 06:42:39,288 | INFO     | process IDs to be killed: [2838260] (in reverse order)
[2025-10-13 02:43:22] 2025-10-13 06:42:39,324 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 02:43:22] 2025-10-13 06:42:39,325 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 02:43:22] 2025-10-13 06:42:39,328 | INFO     | did not find any defunct processes belonging to 2838260
[2025-10-13 02:43:22] 2025-10-13 06:42:39,331 | INFO     | did not find any defunct processes belonging to 2838260
[2025-10-13 02:43:22] 2025-10-13 06:42:39,331 | INFO     | ready for new job
[2025-10-13 02:43:22] 2025-10-13 06:42:39,331 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 02:43:22] 2025-10-13 06:42:39,333 | INFO     | ***************************************
[2025-10-13 02:43:22] 2025-10-13 06:42:39,333 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 02:43:22] 2025-10-13 06:42:39,333 | INFO     | ***************************************
[2025-10-13 02:43:22] 2025-10-13 06:42:39,333 | INFO     | 
[2025-10-13 02:43:22] 2025-10-13 06:42:39,334 | INFO     | architecture information:
[2025-10-13 02:43:22] 2025-10-13 06:42:39,334 | INFO     | executing command: cat /etc/os-release
[2025-10-13 02:43:22] 2025-10-13 06:42:39,342 | INFO     | cat /etc/os-release:
[2025-10-13 02:43:22] NAME="CentOS Linux"
[2025-10-13 02:43:22] VERSION="7 (Core)"
[2025-10-13 02:43:22] ID="centos"
[2025-10-13 02:43:22] ID_LIKE="rhel fedora"
[2025-10-13 02:43:22] VERSION_ID="7"
[2025-10-13 02:43:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 02:43:22] ANSI_COLOR="0;31"
[2025-10-13 02:43:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 02:43:22] HOME_URL="https://www.centos.org/"
[2025-10-13 02:43:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 02:43:22] 
[2025-10-13 02:43:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 02:43:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 02:43:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 02:43:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 02:43:22] 
[2025-10-13 02:43:22] 2025-10-13 06:42:39,342 | INFO     | ***************************************
[2025-10-13 02:43:22] 2025-10-13 06:42:39,844 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 02:43:22] 2025-10-13 06:42:39,853 | INFO     | sufficient remaining disk space (51138002944 B)
[2025-10-13 02:43:22] 2025-10-13 06:42:39,853 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 02:43:22] 2025-10-13 06:42:39,853 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 02:43:22] 2025-10-13 06:42:39,853 | INFO     | update_server=False
[2025-10-13 02:43:22] 2025-10-13 06:42:39,853 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 02:43:22] 2025-10-13 06:42:39,854 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 02:43:22] 2025-10-13 06:42:40,370 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 02:43:22] 2025-10-13 06:42:40,370 | INFO     | aborting loop
[2025-10-13 02:43:22] 2025-10-13 06:42:40,639 | INFO     | all payload control threads have been joined
[2025-10-13 02:43:22] 2025-10-13 06:42:40,814 | INFO     | all job control threads have been joined
[2025-10-13 02:43:22] 2025-10-13 06:42:40,858 | INFO     | [job] retrieve thread has finished
[2025-10-13 02:43:22] 2025-10-13 06:42:40,859 | INFO     | [job] queue monitor thread has finished
[2025-10-13 02:43:22] 2025-10-13 06:42:40,884 | INFO     | [data] copytool_in thread has finished
[2025-10-13 02:43:22] 2025-10-13 06:42:40,922 | INFO     | all data control threads have been joined
[2025-10-13 02:43:22] 2025-10-13 06:42:41,025 | INFO     | [job] validate thread has finished
[2025-10-13 02:43:22] 2025-10-13 06:42:41,052 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 02:43:22] 2025-10-13 06:42:41,066 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 02:43:22] 2025-10-13 06:42:41,114 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 02:43:22] 2025-10-13 06:42:41,131 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 02:43:22] 2025-10-13 06:42:41,230 | INFO     | [payload] failed_post thread has finished
[2025-10-13 02:43:22] 2025-10-13 06:42:41,268 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 02:43:22] 2025-10-13 06:42:41,376 | INFO     | [job] job monitor thread has finished
[2025-10-13 02:43:22] 2025-10-13 06:42:41,643 | INFO     | [payload] control thread has finished
[2025-10-13 02:43:22] 2025-10-13 06:42:41,720 | INFO     | [payload] validate_post thread has finished
[2025-10-13 02:43:22] 2025-10-13 06:42:41,820 | INFO     | [job] control thread has finished
[2025-10-13 02:43:22] 2025-10-13 06:42:41,927 | INFO     | [data] control thread has finished
[2025-10-13 02:43:22] 2025-10-13 06:42:43,071 | INFO     | [data] copytool_out thread has finished
[2025-10-13 02:43:22] 2025-10-13 06:42:45,137 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 02:43:22] 2025-10-13 06:42:49,985 | INFO     | job.realtimelogging is not enabled
[2025-10-13 02:43:22] 2025-10-13 06:42:50,990 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 02:43:22] 2025-10-13 06:43:10,397 | INFO     | PID=2831866 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 02:43:22] 2025-10-13 06:43:10,398 | INFO     | .. there are 5 such processes running
[2025-10-13 02:43:22] 2025-10-13 06:43:10,398 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 02:43:22] 2025-10-13 06:43:10,398 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 02:43:22] 2025-10-13 06:43:10,398 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 02:43:22] 2025-10-13 06:43:16,927 | INFO     | [monitor] cgroup control has ended
[2025-10-13 02:43:22] 2025-10-13 06:43:17,575 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140666020013888)>', '<ExcThread(monitor, started 140665539258112)>']
[2025-10-13 02:43:22] 2025-10-13 06:43:18,437 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 02:43:22] 2025-10-13 06:43:18,437 | INFO     | [monitor] control thread has ended
[2025-10-13 02:43:22] 2025-10-13 06:43:22,591 | INFO     | all workflow threads have been joined
[2025-10-13 02:43:22] 2025-10-13 06:43:22,592 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 02:43:22] 2025-10-13 06:43:22,592 | INFO     | traces error code: 0
[2025-10-13 02:43:22] 2025-10-13 06:43:22,592 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 02:43:22] 2025-10-13 06:43:22,673 [wrapper] ==== pilot stdout END ====
[2025-10-13 02:43:22] 2025-10-13 06:43:22,675 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 02:43:22] 2025-10-13 06:43:22,676 [wrapper] pilotpid: 2831866
[2025-10-13 02:43:22] 2025-10-13 06:43:22,678 [wrapper] Pilot exit status: 0
[2025-10-13 02:43:22] 2025-10-13 06:43:22,685 [wrapper] pandaids: 6840970172
[2025-10-13 02:43:22] 2025-10-13 06:43:22,723 [wrapper] cleanup supervisor_pilot 2944312 2831867
[2025-10-13 02:43:22] 2025-10-13 06:43:22,725 [wrapper] Test setup, not cleaning
[2025-10-13 02:43:22] 2025-10-13 06:43:22,727 [wrapper] apfmon messages muted
[2025-10-13 02:43:22] 2025-10-13 06:43:22,729 [wrapper] ==== wrapper stdout END ====
[2025-10-13 02:43:22] 2025-10-13 06:43:22,730 [wrapper] ==== wrapper stderr END ====
[2025-10-13 02:43:22]  *** Error codes and diagnostics ***
[2025-10-13 02:43:22]     "exeErrorCode": 0,
[2025-10-13 02:43:22]     "exeErrorDiag": "",
[2025-10-13 02:43:22]     "pilotErrorCode": 0,
[2025-10-13 02:43:22]     "pilotErrorDiag": "",
[2025-10-13 02:43:22]  *** Listing of results directory ***
[2025-10-13 02:43:22] total 410412
[2025-10-13 02:43:22] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 19:51 pilot3.tar.gz
[2025-10-13 02:43:22] -rwx------. 1 boincer umatlas     36292 Oct 12 19:55 runpilot2-wrapper.sh
[2025-10-13 02:43:22] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 19:55 queuedata.json
[2025-10-13 02:43:22] -rw-r--r--. 1 boincer umatlas       100 Oct 13 01:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 02:43:22] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 01:36 run_atlas
[2025-10-13 02:43:22] -rw-r--r--. 1 boincer umatlas       105 Oct 13 01:36 job.xml
[2025-10-13 02:43:22] -rw-r--r--. 2 boincer umatlas 219965991 Oct 13 01:36 EVNT.46676267._004672.pool.root.1
[2025-10-13 02:43:22] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 01:36 start_atlas.sh
[2025-10-13 02:43:22] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 01:36 shared
[2025-10-13 02:43:22] -rw-r--r--. 2 boincer umatlas    569674 Oct 13 01:36 input.tar.gz
[2025-10-13 02:43:22] -rw-r--r--. 1 boincer umatlas         0 Oct 13 01:36 boinc_lockfile
[2025-10-13 02:43:22] -rw-r--r--. 1 boincer umatlas      2550 Oct 13 01:36 pandaJob.out
[2025-10-13 02:43:22] -rw-------. 1 boincer umatlas    973230 Oct 13 01:36 agis_schedconf.cvmfs.json
[2025-10-13 02:43:22] -rw-------. 1 boincer umatlas   1560580 Oct 13 01:36 agis_ddmendpoints.agis.ALL.json
[2025-10-13 02:43:22] drwx------. 5 boincer umatlas      4096 Oct 13 01:36 pilot3
[2025-10-13 02:43:22] -rw-r--r--. 1 boincer umatlas      6659 Oct 13 02:37 init_data.xml
[2025-10-13 02:43:22] -rw-------. 1 boincer umatlas 194526467 Oct 13 02:42 HITS.46676269._092592.pool.root.1
[2025-10-13 02:43:22] -rw-r--r--. 1 boincer umatlas       529 Oct 13 02:42 boinc_task_state.xml
[2025-10-13 02:43:22] -rw-------. 1 boincer umatlas      1033 Oct 13 02:42 memory_monitor_summary.json
[2025-10-13 02:43:22] -rw-------. 1 boincer umatlas    333990 Oct 13 02:42 log.46676269._092592.job.log.tgz.1
[2025-10-13 02:43:22] -rw-------. 1 boincer umatlas      7816 Oct 13 02:42 heartbeat.json
[2025-10-13 02:43:22] -rw-------. 1 boincer umatlas        95 Oct 13 02:43 pilot_heartbeat.json
[2025-10-13 02:43:22] -rw-r--r--. 1 boincer umatlas        27 Oct 13 02:43 wrapper_checkpoint.txt
[2025-10-13 02:43:22] -rw-------. 1 boincer umatlas      4895 Oct 13 02:43 pilotlog.txt
[2025-10-13 02:43:22] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 02:43 boinc_mmap_file
[2025-10-13 02:43:22] -rw-------. 1 boincer umatlas    600601 Oct 13 02:43 log.46676269._092592.job.log.1
[2025-10-13 02:43:22] -rw-------. 1 boincer umatlas       357 Oct 13 02:43 output.list
[2025-10-13 02:43:22] -rw-r--r--. 1 boincer umatlas       620 Oct 13 02:43 runtime_log
[2025-10-13 02:43:22] -rw-------. 1 boincer umatlas    952320 Oct 13 02:43 result.tar.gz
[2025-10-13 02:43:22] -rw-r--r--. 1 boincer umatlas      8703 Oct 13 02:43 runtime_log.err
[2025-10-13 02:43:22] -rw-------. 1 boincer umatlas       650 Oct 13 02:43 nEDNDml5KS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmx6lNDmqcc6ln.diag
[2025-10-13 02:43:22] -rw-r--r--. 1 boincer umatlas     21760 Oct 13 02:43 stderr.txt
[2025-10-13 02:43:22] HITS file was successfully produced:
[2025-10-13 02:43:22] -rw-------. 1 boincer umatlas 194526467 Oct 13 02:42 shared/HITS.pool.root.1
[2025-10-13 02:43:22]  *** Contents of shared directory: ***
[2025-10-13 02:43:22] total 406296
[2025-10-13 02:43:22] -rw-r--r--. 2 boincer umatlas 219965991 Oct 13 01:36 ATLAS.root_0
[2025-10-13 02:43:22] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 01:36 start_atlas.sh
[2025-10-13 02:43:22] -rw-r--r--. 2 boincer umatlas    569674 Oct 13 01:36 input.tar.gz
[2025-10-13 02:43:22] -rw-------. 1 boincer umatlas 194526467 Oct 13 02:42 HITS.pool.root.1
[2025-10-13 02:43:22] -rw-------. 1 boincer umatlas    952320 Oct 13 02:43 result.tar.gz
02:43:23 (2828147): run_atlas exited; CPU time 29150.784642
02:43:23 (2828147): called boinc_finish(0)

</stderr_txt>
]]>

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