Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
06:49:26 (4087): wrapper (7.7.26015): starting
06:49:26 (4087): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 06:49:26] Arguments: --nthreads 8
[2025-10-13 06:49:26] Threads: 8
[2025-10-13 06:49:26] Checking for CVMFS
[2025-10-13 06:49:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 06:49:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 06:49:28] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 06:49:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 06:49:30] 2.11.5.0 4319 646 174312 151649 2 188 2677245 4194305 21153 130560 0 9184177 99.999 22886 316 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://127.0.0.1:3128 1
[2025-10-13 06:49:30] CVMFS is ok
[2025-10-13 06:49:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 06:49:30] Checking for apptainer binary...
[2025-10-13 06:49:30] apptainer is not installed, using version from CVMFS
[2025-10-13 06:49:30] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 06:49:31] mikemint-desktop
[2025-10-13 06:49:31] apptainer works
[2025-10-13 06:49:31] Set ATHENA_PROC_NUMBER=8
[2025-10-13 06:49:31] Set ATHENA_CORE_NUMBER=8
[2025-10-13 06:49:31] Starting ATLAS job with PandaID=6840969842
[2025-10-13 06:49:31] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/24 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 09:31:40]  *** The last 200 lines of the pilot log: ***
[2025-10-13 09:31:40] 2025-10-13 07:30:44,887 | INFO     | -- intersect: -34060090296.320946
[2025-10-13 09:31:40] 2025-10-13 07:30:44,887 | INFO     | intersect: -34060090296.320946
[2025-10-13 09:31:40] 2025-10-13 07:30:44,887 | INFO     | chi2: 0.24274115380460215
[2025-10-13 09:31:40] 2025-10-13 07:30:44,887 | INFO     | current chi2=0.24274115380460215 (change=93.85606211191661 %)
[2025-10-13 09:31:40] 2025-10-13 07:30:44,888 | INFO     | sum of square deviations: 887813855.5
[2025-10-13 09:31:40] 2025-10-13 07:30:44,888 | INFO     | sum of deviations: 7592051612.499999
[2025-10-13 09:31:40] 2025-10-13 07:30:44,889 | INFO     | mean x: 1760336236.5
[2025-10-13 09:31:40] 2025-10-13 07:30:44,889 | INFO     | mean y: 2477895.204225352
[2025-10-13 09:31:40] 2025-10-13 07:30:44,889 | INFO     | -- intersect: -15050861811.163992
[2025-10-13 09:31:40] 2025-10-13 07:30:44,889 | INFO     | intersect: -15050861811.163992
[2025-10-13 09:31:40] 2025-10-13 07:30:44,889 | INFO     | chi2: 0.034899597711014294
[2025-10-13 09:31:40] 2025-10-13 07:30:44,889 | INFO     | current chi2=0.034899597711014294 (change=85.62271079130356 %)
[2025-10-13 09:31:40] 2025-10-13 07:30:44,890 | INFO     | sum of square deviations: 797291228.0
[2025-10-13 09:31:40] 2025-10-13 07:30:44,891 | INFO     | sum of deviations: 3784461716.0
[2025-10-13 09:31:40] 2025-10-13 07:30:44,891 | INFO     | mean x: 1760336389.0
[2025-10-13 09:31:40] 2025-10-13 07:30:44,891 | INFO     | mean y: 2484222.3503649635
[2025-10-13 09:31:40] 2025-10-13 07:30:44,891 | INFO     | -- intersect: -8353214971.987421
[2025-10-13 09:31:40] 2025-10-13 07:30:44,891 | INFO     | intersect: -8353214971.987421
[2025-10-13 09:31:40] 2025-10-13 07:30:44,891 | INFO     | chi2: 0.0006167203642032216
[2025-10-13 09:31:40] 2025-10-13 07:30:44,891 | INFO     | current chi2=0.0006167203642032216 (change=98.2328725697357 %)
[2025-10-13 09:31:40] 2025-10-13 07:30:44,892 | INFO     | sum of square deviations: 713140813.0
[2025-10-13 09:31:40] 2025-10-13 07:30:44,892 | INFO     | sum of deviations: 2938339683.0
[2025-10-13 09:31:40] 2025-10-13 07:30:44,893 | INFO     | mean x: 1760336541.5
[2025-10-13 09:31:40] 2025-10-13 07:30:44,893 | INFO     | mean y: 2485755.772727273
[2025-10-13 09:31:40] 2025-10-13 07:30:44,893 | INFO     | -- intersect: -7250593329.0789585
[2025-10-13 09:31:40] 2025-10-13 07:30:44,893 | INFO     | intersect: -7250593329.0789585
[2025-10-13 09:31:40] 2025-10-13 07:30:44,893 | INFO     | chi2: 0.00015692384166192419
[2025-10-13 09:31:40] 2025-10-13 07:30:44,893 | INFO     | current chi2=0.00015692384166192419 (change=74.5551062085223 %)
[2025-10-13 09:31:40] 2025-10-13 07:30:44,894 | INFO     | sum of square deviations: 635130048.0
[2025-10-13 09:31:40] 2025-10-13 07:30:44,894 | INFO     | sum of deviations: 2478751104.0
[2025-10-13 09:31:40] 2025-10-13 07:30:44,895 | INFO     | mean x: 1760336694.0
[2025-10-13 09:31:40] 2025-10-13 07:30:44,895 | INFO     | mean y: 2486650.2677165354
[2025-10-13 09:31:40] 2025-10-13 07:30:44,895 | INFO     | -- intersect: -6867659924.287374
[2025-10-13 09:31:40] 2025-10-13 07:30:44,895 | INFO     | intersect: -6867659924.287374
[2025-10-13 09:31:40] 2025-10-13 07:30:44,895 | INFO     | chi2: 9.297716453763897e-05
[2025-10-13 09:31:40] 2025-10-13 07:30:44,895 | INFO     | current chi2=9.297716453763897e-05 (change=40.750134872463526 %)
[2025-10-13 09:31:40] 2025-10-13 07:30:44,896 | INFO     | sum of square deviations: 563026370.5
[2025-10-13 09:31:40] 2025-10-13 07:30:44,896 | INFO     | sum of deviations: 2175996239.5
[2025-10-13 09:31:40] 2025-10-13 07:30:44,897 | INFO     | mean x: 1760336846.5
[2025-10-13 09:31:40] 2025-10-13 07:30:44,897 | INFO     | mean y: 2487289.450819672
[2025-10-13 09:31:40] 2025-10-13 07:30:44,897 | INFO     | -- intersect: -6800899832.249351
[2025-10-13 09:31:40] 2025-10-13 07:30:44,897 | INFO     | intersect: -6800899832.249351
[2025-10-13 09:31:40] 2025-10-13 07:30:44,897 | INFO     | chi2: 9.028383694017854e-05
[2025-10-13 09:31:40] 2025-10-13 07:30:44,897 | INFO     | current chi2=9.028383694017854e-05 (change=2.896762458668133 %)
[2025-10-13 09:31:40] 2025-10-13 07:30:44,897 | INFO     | left removable region: 60
[2025-10-13 09:31:40] 2025-10-13 07:30:44,898 | INFO     | sum of square deviations: 197203697.5
[2025-10-13 09:31:40] 2025-10-13 07:30:44,898 | INFO     | sum of deviations: 760364938.9999999
[2025-10-13 09:31:40] 2025-10-13 07:30:44,898 | INFO     | mean x: 1760337578.5
[2025-10-13 09:31:40] 2025-10-13 07:30:44,898 | INFO     | mean y: 2490694.418604651
[2025-10-13 09:31:40] 2025-10-13 07:30:44,899 | INFO     | -- intersect: -6784902201.678387
[2025-10-13 09:31:40] 2025-10-13 07:30:44,899 | INFO     | intersect: -6784902201.678387
[2025-10-13 09:31:40] 2025-10-13 07:30:44,899 | INFO     | chi2: 5.488841960299031e-05
[2025-10-13 09:31:40] 2025-10-13 07:30:44,899 | INFO     | -- intersect: -6784902201.678387
[2025-10-13 09:31:40] 2025-10-13 07:30:44,899 | INFO     | current memory leak: 3.86 B/s (using 86 data points, chi2=0.00)
[2025-10-13 09:31:40] 2025-10-13 07:30:44,900 | INFO     | could have reported an average CPU frequency of 2363 MHz (9 samples)
[2025-10-13 09:31:40] 2025-10-13 07:30:44,900 | INFO     | ..............................
[2025-10-13 09:31:40] 2025-10-13 07:30:44,900 | INFO     | . Timing measurements:
[2025-10-13 09:31:40] 2025-10-13 07:30:44,900 | INFO     | . get job = 0 s
[2025-10-13 09:31:40] 2025-10-13 07:30:44,900 | INFO     | . initial setup = 5 s
[2025-10-13 09:31:40] 2025-10-13 07:30:44,900 | INFO     | . payload setup = 84 s
[2025-10-13 09:31:40] 2025-10-13 07:30:44,900 | INFO     | . stage-in = 0 s
[2025-10-13 09:31:40] 2025-10-13 07:30:44,901 | INFO     | . payload execution = 9315 s
[2025-10-13 09:31:40] 2025-10-13 07:30:44,901 | INFO     | . stage-out = 2 s
[2025-10-13 09:31:40] 2025-10-13 07:30:44,901 | INFO     | . log creation = 0 s
[2025-10-13 09:31:40] 2025-10-13 07:30:44,901 | INFO     | ..............................
[2025-10-13 09:31:40] 2025-10-13 07:30:45,119 | INFO     | 
[2025-10-13 09:31:40] 2025-10-13 07:30:45,119 | INFO     | job summary report
[2025-10-13 09:31:40] 2025-10-13 07:30:45,120 | INFO     | --------------------------------------------------
[2025-10-13 09:31:40] 2025-10-13 07:30:45,120 | INFO     | PanDA job id: 6840969842
[2025-10-13 09:31:40] 2025-10-13 07:30:45,120 | INFO     | task id: 46676269
[2025-10-13 09:31:40] 2025-10-13 07:30:45,120 | INFO     | errors: (none)
[2025-10-13 09:31:40] 2025-10-13 07:30:45,120 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 09:31:40] 2025-10-13 07:30:45,120 | INFO     | pilot state: finished 
[2025-10-13 09:31:40] 2025-10-13 07:30:45,120 | INFO     | transexitcode: 0
[2025-10-13 09:31:40] 2025-10-13 07:30:45,120 | INFO     | exeerrorcode: 0
[2025-10-13 09:31:40] 2025-10-13 07:30:45,120 | INFO     | exeerrordiag: 
[2025-10-13 09:31:40] 2025-10-13 07:30:45,120 | INFO     | exitcode: 0
[2025-10-13 09:31:40] 2025-10-13 07:30:45,120 | INFO     | exitmsg: OK
[2025-10-13 09:31:40] 2025-10-13 07:30:45,121 | INFO     | cpuconsumptiontime: 47276 s
[2025-10-13 09:31:40] 2025-10-13 07:30:45,121 | INFO     | nevents: 400
[2025-10-13 09:31:40] 2025-10-13 07:30:45,121 | INFO     | neventsw: 0
[2025-10-13 09:31:40] 2025-10-13 07:30:45,121 | INFO     | pid: 41879
[2025-10-13 09:31:40] 2025-10-13 07:30:45,121 | INFO     | pgrp: 41879
[2025-10-13 09:31:40] 2025-10-13 07:30:45,121 | INFO     | corecount: 8
[2025-10-13 09:31:40] 2025-10-13 07:30:45,121 | INFO     | event service: False
[2025-10-13 09:31:40] 2025-10-13 07:30:45,121 | INFO     | sizes: {0: 2348694, 1: 2348893, 12: 2348893, 23: 2348921, 34: 2348949, 45: 2348977, 53: 2349395, 55: 2349423, 9405: 2377928, 9407: 2386942, 9409: 2386998, 9462: 23
[2025-10-13 09:31:40] 2025-10-13 07:30:45,121 | INFO     | --------------------------------------------------
[2025-10-13 09:31:40] 2025-10-13 07:30:45,121 | INFO     | 
[2025-10-13 09:31:40] 2025-10-13 07:30:45,122 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/24
[2025-10-13 09:31:40] 2025-10-13 07:30:45,321 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 09:31:40] 2025-10-13 07:30:45,322 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 09:31:40] 2025-10-13 07:30:45,322 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 09:31:40] 2025-10-13 07:30:45,322 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 09:31:40] 2025-10-13 07:30:45,322 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 09:31:40] 2025-10-13 07:30:45,322 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 09:31:40] 2025-10-13 07:30:45,322 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 09:31:40] 2025-10-13 07:30:45,322 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 09:31:40] 2025-10-13 07:30:45,322 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 09:31:40] 2025-10-13 07:30:45,323 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 09:31:40] 2025-10-13 07:30:45,323 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 09:31:40] 2025-10-13 07:30:45,323 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 09:31:40] 2025-10-13 07:30:45,323 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 09:31:40] 2025-10-13 07:30:45,323 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 09:31:40] 2025-10-13 07:30:45,323 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 09:31:40] 2025-10-13 07:30:45,323 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 09:31:40] 2025-10-13 07:30:45,323 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 09:31:40] 2025-10-13 07:30:45,323 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 09:31:40] 2025-10-13 07:30:45,324 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 09:31:40] 2025-10-13 07:30:45,324 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 09:31:40] 2025-10-13 07:30:45,324 | INFO     | job 6840969842 has completed (purged errors)
[2025-10-13 09:31:40] 2025-10-13 07:30:45,324 | INFO     | overall cleanup function is called
[2025-10-13 09:31:40] 2025-10-13 07:30:46,333 | INFO     | --- collectZombieJob: --- 10, [41879]
[2025-10-13 09:31:40] 2025-10-13 07:30:46,333 | INFO     | zombie collector waiting for pid 41879
[2025-10-13 09:31:40] 2025-10-13 07:30:46,333 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 09:31:40] 2025-10-13 07:30:46,333 | INFO     | collected zombie processes
[2025-10-13 09:31:40] 2025-10-13 07:30:46,334 | INFO     | will attempt to kill all subprocesses of pid=41879
[2025-10-13 09:31:40] 2025-10-13 07:30:47,547 | INFO     | process IDs to be killed: [41879] (in reverse order)
[2025-10-13 09:31:40] 2025-10-13 07:30:50,398 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 09:31:40] 2025-10-13 07:30:50,398 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 09:31:40] 2025-10-13 07:30:50,438 | INFO     | did not find any defunct processes belonging to 41879
[2025-10-13 09:31:40] 2025-10-13 07:30:50,458 | INFO     | did not find any defunct processes belonging to 41879
[2025-10-13 09:31:40] 2025-10-13 07:30:50,458 | INFO     | ready for new job
[2025-10-13 09:31:40] 2025-10-13 07:30:50,458 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 09:31:40] 2025-10-13 07:30:50,460 | INFO     | ***************************************
[2025-10-13 09:31:40] 2025-10-13 07:30:50,460 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 09:31:40] 2025-10-13 07:30:50,461 | INFO     | ***************************************
[2025-10-13 09:31:40] 2025-10-13 07:30:50,461 | INFO     | 
[2025-10-13 09:31:40] 2025-10-13 07:30:50,473 | INFO     | architecture information:
[2025-10-13 09:31:40] 2025-10-13 07:30:50,477 | INFO     | executing command: cat /etc/os-release
[2025-10-13 09:31:40] 2025-10-13 07:30:50,601 | INFO     | cat /etc/os-release:
[2025-10-13 09:31:40] NAME="CentOS Linux"
[2025-10-13 09:31:40] VERSION="7 (Core)"
[2025-10-13 09:31:40] ID="centos"
[2025-10-13 09:31:40] ID_LIKE="rhel fedora"
[2025-10-13 09:31:40] VERSION_ID="7"
[2025-10-13 09:31:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 09:31:40] ANSI_COLOR="0;31"
[2025-10-13 09:31:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 09:31:40] HOME_URL="https://www.centos.org/"
[2025-10-13 09:31:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 09:31:40] 
[2025-10-13 09:31:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 09:31:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 09:31:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 09:31:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 09:31:40] 
[2025-10-13 09:31:40] 2025-10-13 07:30:50,602 | INFO     | ***************************************
[2025-10-13 09:31:40] 2025-10-13 07:30:51,109 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/24
[2025-10-13 09:31:40] 2025-10-13 07:30:51,235 | INFO     | sufficient remaining disk space (194516090880 B)
[2025-10-13 09:31:40] 2025-10-13 07:30:51,235 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 09:31:40] 2025-10-13 07:30:51,235 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 09:31:40] 2025-10-13 07:30:51,235 | INFO     | update_server=False
[2025-10-13 09:31:40] 2025-10-13 07:30:51,235 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 09:31:40] 2025-10-13 07:30:51,236 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 09:31:40] 2025-10-13 07:30:51,236 | INFO     | aborting loop
[2025-10-13 09:31:40] 2025-10-13 07:30:51,237 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 09:31:40] 2025-10-13 07:30:51,853 | INFO     | all data control threads have been joined
[2025-10-13 09:31:40] 2025-10-13 07:30:51,973 | INFO     | all payload control threads have been joined
[2025-10-13 09:31:40] 2025-10-13 07:30:52,017 | INFO     | all job control threads have been joined
[2025-10-13 09:31:40] 2025-10-13 07:30:52,245 | INFO     | [job] job monitor thread has finished
[2025-10-13 09:31:40] 2025-10-13 07:30:52,246 | INFO     | [job] retrieve thread has finished
[2025-10-13 09:31:40] 2025-10-13 07:30:52,277 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 09:31:40] 2025-10-13 07:30:52,281 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 09:31:40] 2025-10-13 07:30:52,365 | INFO     | [payload] failed_post thread has finished
[2025-10-13 09:31:40] 2025-10-13 07:30:52,601 | INFO     | [job] validate thread has finished
[2025-10-13 09:31:40] 2025-10-13 07:30:52,861 | INFO     | [data] control thread has finished
[2025-10-13 09:31:40] 2025-10-13 07:30:52,981 | INFO     | [payload] control thread has finished
[2025-10-13 09:31:40] 2025-10-13 07:30:53,005 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 09:31:40] 2025-10-13 07:30:53,025 | INFO     | [job] control thread has finished
[2025-10-13 09:31:40] 2025-10-13 07:30:53,157 | INFO     | [data] copytool_in thread has finished
[2025-10-13 09:31:40] 2025-10-13 07:30:53,245 | INFO     | [data] copytool_out thread has finished
[2025-10-13 09:31:40] 2025-10-13 07:30:53,409 | INFO     | [payload] validate_post thread has finished
[2025-10-13 09:31:40] 2025-10-13 07:30:53,633 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 09:31:40] 2025-10-13 07:30:53,741 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 09:31:40] 2025-10-13 07:30:54,161 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 09:31:40] 2025-10-13 07:30:55,165 | INFO     | [job] queue monitor thread has finished
[2025-10-13 09:31:40] 2025-10-13 07:30:56,293 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 09:31:40] 2025-10-13 07:31:18,519 | INFO     | PID=14909 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-13 09:31:40] 2025-10-13 07:31:18,519 | INFO     | .. there are 25 such processes running
[2025-10-13 09:31:40] 2025-10-13 07:31:18,520 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 09:31:40] 2025-10-13 07:31:18,520 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 09:31:40] 2025-10-13 07:31:18,520 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 09:31:40] 2025-10-13 07:31:32,337 | INFO     | [monitor] cgroup control has ended
[2025-10-13 09:31:40] 2025-10-13 07:31:33,453 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140131306096448)>', '<ExcThread(monitor, started 140130857760512)>']
[2025-10-13 09:31:40] 2025-10-13 07:31:33,613 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 09:31:40] 2025-10-13 07:31:33,613 | INFO     | [monitor] control thread has ended
[2025-10-13 09:31:40] 2025-10-13 07:31:38,477 | INFO     | all workflow threads have been joined
[2025-10-13 09:31:40] 2025-10-13 07:31:38,477 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 09:31:40] 2025-10-13 07:31:38,477 | INFO     | traces error code: 0
[2025-10-13 09:31:40] 2025-10-13 07:31:38,478 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 09:31:40] 2025-10-13 07:31:38,681 [wrapper] ==== pilot stdout END ====
[2025-10-13 09:31:40] 2025-10-13 07:31:38,733 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 09:31:40] 2025-10-13 07:31:38,769 [wrapper] pilotpid: 14909
[2025-10-13 09:31:40] 2025-10-13 07:31:38,801 [wrapper] Pilot exit status: 0
[2025-10-13 09:31:40] 2025-10-13 07:31:38,993 [wrapper] pandaids: 6840969842
[2025-10-13 09:31:40] 2025-10-13 07:31:39,433 [wrapper] cleanup supervisor_pilot  771701 14910
[2025-10-13 09:31:40] 2025-10-13 07:31:39,474 [wrapper] Test setup, not cleaning
[2025-10-13 09:31:40] 2025-10-13 07:31:39,522 [wrapper] apfmon messages muted
[2025-10-13 09:31:40] 2025-10-13 07:31:39,562 [wrapper] ==== wrapper stdout END ====
[2025-10-13 09:31:40] 2025-10-13 07:31:39,617 [wrapper] ==== wrapper stderr END ====
[2025-10-13 09:31:40]  *** Error codes and diagnostics ***
[2025-10-13 09:31:40]     "exeErrorCode": 0,
[2025-10-13 09:31:40]     "exeErrorDiag": "",
[2025-10-13 09:31:40]     "pilotErrorCode": 0,
[2025-10-13 09:31:40]     "pilotErrorDiag": "",
[2025-10-13 09:31:40]  *** Listing of results directory ***
[2025-10-13 09:31:40] insgesamt 416400
[2025-10-13 09:31:40] -rw-r--r-- 1 boinc boinc    557409 Okt 13 01:51 pilot3.tar.gz
[2025-10-13 09:31:40] -rw-r--r-- 1 boinc boinc      5112 Okt 13 01:53 queuedata.json
[2025-10-13 09:31:40] -rwx------ 1 boinc boinc     36292 Okt 13 01:54 runpilot2-wrapper.sh
[2025-10-13 09:31:40] -rw-r--r-- 1 boinc boinc       100 Okt 13 06:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 09:31:40] -rwxr-xr-x 1 boinc boinc      7986 Okt 13 06:49 run_atlas
[2025-10-13 09:31:40] -rw-r--r-- 1 boinc boinc       105 Okt 13 06:49 job.xml
[2025-10-13 09:31:40] -rw-r--r-- 2 boinc boinc 221678238 Okt 13 06:49 EVNT.46676267._004670.pool.root.1
[2025-10-13 09:31:40] -rw-r--r-- 2 boinc boinc     15120 Okt 13 06:49 start_atlas.sh
[2025-10-13 09:31:40] drwxrwx--x 2 boinc boinc      4096 Okt 13 06:49 shared
[2025-10-13 09:31:40] -rw-r--r-- 2 boinc boinc    569680 Okt 13 06:49 input.tar.gz
[2025-10-13 09:31:40] -rw-r--r-- 1 boinc boinc      6667 Okt 13 06:49 init_data.xml
[2025-10-13 09:31:40] -rw-r--r-- 1 boinc boinc         0 Okt 13 06:49 boinc_lockfile
[2025-10-13 09:31:40] -rw-r--r-- 1 boinc boinc      2550 Okt 13 06:49 pandaJob.out
[2025-10-13 09:31:40] -rw------- 1 boinc boinc    974365 Okt 13 06:51 agis_schedconf.cvmfs.json
[2025-10-13 09:31:40] -rw------- 1 boinc boinc   1560580 Okt 13 06:51 agis_ddmendpoints.agis.ALL.json
[2025-10-13 09:31:40] drwx------ 5 boinc boinc      4096 Okt 13 06:51 pilot3
[2025-10-13 09:31:40] -rw------- 1 boinc boinc 197484231 Okt 13 09:28 HITS.46676269._092526.pool.root.1
[2025-10-13 09:31:40] -rw-r--r-- 1 boinc boinc       530 Okt 13 09:29 boinc_task_state.xml
[2025-10-13 09:31:40] -rw------- 1 boinc boinc      1026 Okt 13 09:29 memory_monitor_summary.json
[2025-10-13 09:31:40] -rw------- 1 boinc boinc    382798 Okt 13 09:29 log.46676269._092526.job.log.tgz.1
[2025-10-13 09:31:40] -rw------- 1 boinc boinc      7754 Okt 13 09:30 heartbeat.json
[2025-10-13 09:31:40] -rw------- 1 boinc boinc        95 Okt 13 09:31 pilot_heartbeat.json
[2025-10-13 09:31:40] -rw-r--r-- 1 boinc boinc      8192 Okt 13 09:31 boinc_mmap_file
[2025-10-13 09:31:40] -rw-r--r-- 1 boinc boinc        27 Okt 13 09:31 wrapper_checkpoint.txt
[2025-10-13 09:31:40] -rw------- 1 boinc boinc      4831 Okt 13 09:31 pilotlog.txt
[2025-10-13 09:31:40] -rw------- 1 boinc boinc   1281310 Okt 13 09:31 log.46676269._092526.job.log.1
[2025-10-13 09:31:40] -rw------- 1 boinc boinc       357 Okt 13 09:31 output.list
[2025-10-13 09:31:40] -rw-r--r-- 1 boinc boinc       620 Okt 13 09:31 runtime_log
[2025-10-13 09:31:40] -rw------- 1 boinc boinc   1679360 Okt 13 09:31 result.tar.gz
[2025-10-13 09:31:40] -rw-r--r-- 1 boinc boinc      8856 Okt 13 09:31 runtime_log.err
[2025-10-13 09:31:40] -rw------- 1 boinc boinc       664 Okt 13 09:31 QXcLDmn4KS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmV6lNDm57gxMn.diag
[2025-10-13 09:31:40] -rw-r--r-- 1 boinc boinc     20693 Okt 13 09:31 stderr.txt
[2025-10-13 09:31:40] HITS file was successfully produced:
[2025-10-13 09:31:40] -rw------- 1 boinc boinc 197484231 Okt 13 09:28 shared/HITS.pool.root.1
[2025-10-13 09:31:40]  *** Contents of shared directory: ***
[2025-10-13 09:31:40] insgesamt 411564
[2025-10-13 09:31:40] -rw-r--r-- 2 boinc boinc 221678238 Okt 13 06:49 ATLAS.root_0
[2025-10-13 09:31:40] -rw-r--r-- 2 boinc boinc     15120 Okt 13 06:49 start_atlas.sh
[2025-10-13 09:31:40] -rw-r--r-- 2 boinc boinc    569680 Okt 13 06:49 input.tar.gz
[2025-10-13 09:31:40] -rw------- 1 boinc boinc 197484231 Okt 13 09:28 HITS.pool.root.1
[2025-10-13 09:31:40] -rw------- 1 boinc boinc   1679360 Okt 13 09:31 result.tar.gz
09:31:41 (4087): run_atlas exited; CPU time 47869.166814
09:31:41 (4087): called boinc_finish(0)

</stderr_txt>
]]>

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