Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
16:02:27 (4075426): wrapper (7.7.26015): starting
16:02:27 (4075426): wrapper: running run_atlas (--nthreads 4)
[2025-10-13 16:02:27] Arguments: --nthreads 4
[2025-10-13 16:02:27] Threads: 4
[2025-10-13 16:02:27] Checking for CVMFS
[2025-10-13 16:02:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 16:02:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 16:02:28] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 16:02:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 16:02:28] 2.9.2.0 1822434 5737 96660 151662 0 57 22619624 36864000 0 130560 0 5923113 99.993 198089 747 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 16:02:28] CVMFS is ok
[2025-10-13 16:02:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 16:02:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 16:02:28] Further information can be found at the LHC@home message board.
[2025-10-13 16:02:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 16:02:28] Checking for apptainer binary...
[2025-10-13 16:02:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 16:02:28] Running /usr/bin/apptainer --version
[2025-10-13 16:02:28] apptainer version 1.4.1-1.1
[2025-10-13 16:02:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 16:02:28] thA315b
[2025-10-13 16:02:28] apptainer works
[2025-10-13 16:02:28] Set ATHENA_PROC_NUMBER=4
[2025-10-13 16:02:28] Set ATHENA_CORE_NUMBER=4
[2025-10-13 16:02:28] Starting ATLAS job with PandaID=6840969827
[2025-10-13 16:02:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 17:06:44]  *** The last 200 lines of the pilot log: ***
[2025-10-13 17:06:44] 2025-10-13 15:05:43,009 | INFO     | [job] queue monitor thread has finished
[2025-10-13 17:06:44] 2025-10-13 15:05:43,009 | INFO     | [job] retrieve thread has finished
[2025-10-13 17:06:44] 2025-10-13 15:05:43,009 | INFO     | [job] job monitor thread has finished
[2025-10-13 17:06:44] 2025-10-13 15:05:43,088 | INFO     | all data control threads have been joined
[2025-10-13 17:06:44] 2025-10-13 15:05:43,416 | INFO     | [job] control thread has finished
[2025-10-13 17:06:44] 2025-10-13 15:05:43,434 | INFO     | [payload] failed_post thread has finished
[2025-10-13 17:06:44] 2025-10-13 15:05:43,449 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 17:06:44] 2025-10-13 15:05:43,511 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 17:06:44] 2025-10-13 15:05:43,511 | INFO     | all payload control threads have been joined
[2025-10-13 17:06:44] 2025-10-13 15:05:43,624 | INFO     | [data] copytool_in thread has finished
[2025-10-13 17:06:44] 2025-10-13 15:05:43,869 | INFO     | [job] validate thread has finished
[2025-10-13 17:06:44] 2025-10-13 15:05:43,934 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 17:06:44] 2025-10-13 15:05:43,977 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 17:06:44] 2025-10-13 15:05:44,041 | INFO     | [payload] validate_post thread has finished
[2025-10-13 17:06:44] 2025-10-13 15:05:44,094 | INFO     | [data] control thread has finished
[2025-10-13 17:06:44] 2025-10-13 15:05:44,517 | INFO     | [payload] control thread has finished
[2025-10-13 17:06:44] 2025-10-13 15:05:45,454 | INFO     | [data] copytool_out thread has finished
[2025-10-13 17:06:44] 2025-10-13 15:05:46,011 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 17:06:44] 2025-10-13 15:05:52,582 | INFO     | job.realtimelogging is not enabled
[2025-10-13 17:06:44] 2025-10-13 15:05:53,588 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 17:06:44] 2025-10-13 15:06:12,738 | INFO     | PID=4079215 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 17:06:44] 2025-10-13 15:06:12,738 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 17:06:44] 2025-10-13 15:06:12,738 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 17:06:44] 2025-10-13 15:06:12,738 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 17:06:44] 2025-10-13 15:06:39,108 | INFO     | [monitor] cgroup control has ended
[2025-10-13 17:06:44] 2025-10-13 15:06:39,286 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140192402376512)>', '<ExcThread(monitor, started 140191557744384)>']
[2025-10-13 17:06:44] 2025-10-13 15:06:39,876 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 17:06:44] 2025-10-13 15:06:39,877 | INFO     | [monitor] control thread has ended
[2025-10-13 17:06:44] 2025-10-13 15:06:44,309 | INFO     | all workflow threads have been joined
[2025-10-13 17:06:44] 2025-10-13 15:06:44,309 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 17:06:44] 2025-10-13 15:06:44,310 | INFO     | traces error code: 0
[2025-10-13 17:06:44] 2025-10-13 15:06:44,311 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 17:06:44] 2025-10-13 15:06:44,364 [wrapper] ==== pilot stdout END ====
[2025-10-13 17:06:44] 2025-10-13 15:06:44,367 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 17:06:44] 2025-10-13 15:06:44,370 [wrapper] pilotpid: 4079215
[2025-10-13 17:06:44] 2025-10-13 15:06:44,372 [wrapper] Pilot exit status: 0
[2025-10-13 17:06:44] 2025-10-13 15:06:44,380 [wrapper] pandaids: 6840969827
[2025-10-13 17:06:44] 2025-10-13 15:06:44,400 [wrapper] cleanup supervisor_pilot 4096530 4079216
[2025-10-13 17:06:44] 2025-10-13 15:06:44,403 [wrapper] Test setup, not cleaning
[2025-10-13 17:06:44] 2025-10-13 15:06:44,405 [wrapper] apfmon messages muted
[2025-10-13 17:06:44] 2025-10-13 15:06:44,408 [wrapper] ==== wrapper stdout END ====
[2025-10-13 17:06:44] 2025-10-13 15:06:44,410 [wrapper] ==== wrapper stderr END ====
[2025-10-13 17:06:44]  *** Error codes and diagnostics ***
[2025-10-13 17:06:44]     "exeErrorCode": 0,
[2025-10-13 17:06:44]     "exeErrorDiag": "",
[2025-10-13 17:06:44]     "pilotErrorCode": 0,
[2025-10-13 17:06:44]     "pilotErrorDiag": "",
[2025-10-13 17:06:44]  *** Listing of results directory ***
[2025-10-13 17:06:44] total 416800
[2025-10-13 17:06:44] -rw-r--r-- 1 boinc boinc      5112 Oct 13 01:50 queuedata.json
[2025-10-13 17:06:44] -rwx------ 1 boinc boinc     36292 Oct 13 01:51 runpilot2-wrapper.sh
[2025-10-13 17:06:44] -rw-r--r-- 1 boinc boinc    557409 Oct 13 01:51 pilot3.tar.gz
[2025-10-13 17:06:44] -rw-r--r-- 1 boinc boinc       100 Oct 13 16:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 17:06:44] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 16:02 run_atlas
[2025-10-13 17:06:44] -rw-r--r-- 1 boinc boinc       105 Oct 13 16:02 job.xml
[2025-10-13 17:06:44] -rw-r--r-- 2 boinc boinc 223538270 Oct 13 16:02 EVNT.46676267._004669.pool.root.1
[2025-10-13 17:06:44] -rw-r--r-- 2 boinc boinc    569680 Oct 13 16:02 input.tar.gz
[2025-10-13 17:06:44] -rw-r--r-- 2 boinc boinc     15120 Oct 13 16:02 start_atlas.sh
[2025-10-13 17:06:44] drwxrwx--x 2 boinc boinc      4096 Oct 13 16:02 shared
[2025-10-13 17:06:44] -rw-r--r-- 1 boinc boinc         0 Oct 13 16:02 boinc_setup_complete
[2025-10-13 17:06:44] -rw-r--r-- 1 boinc boinc      6443 Oct 13 16:02 init_data.xml
[2025-10-13 17:06:44] -rw-r--r-- 1 boinc boinc         0 Oct 13 16:02 boinc_lockfile
[2025-10-13 17:06:44] -rw-r--r-- 1 boinc boinc      2549 Oct 13 16:02 pandaJob.out
[2025-10-13 17:06:44] -rw------- 1 boinc boinc    972489 Oct 13 16:02 agis_schedconf.cvmfs.json
[2025-10-13 17:06:44] -rw------- 1 boinc boinc   1560580 Oct 13 16:02 agis_ddmendpoints.agis.ALL.json
[2025-10-13 17:06:44] drwx------ 5 boinc boinc      4096 Oct 13 16:02 pilot3
[2025-10-13 17:06:44] -rw------- 1 boinc boinc 197721095 Oct 13 17:05 HITS.46676269._092511.pool.root.1
[2025-10-13 17:06:44] -rw-r--r-- 1 boinc boinc       529 Oct 13 17:05 boinc_task_state.xml
[2025-10-13 17:06:44] -rw------- 1 boinc boinc      1028 Oct 13 17:05 memory_monitor_summary.json
[2025-10-13 17:06:44] -rw------- 1 boinc boinc    258077 Oct 13 17:05 log.46676269._092511.job.log.tgz.1
[2025-10-13 17:06:44] -rw------- 1 boinc boinc      7742 Oct 13 17:05 heartbeat.json
[2025-10-13 17:06:44] -rw------- 1 boinc boinc        95 Oct 13 17:06 pilot_heartbeat.json
[2025-10-13 17:06:44] -rw-r--r-- 1 boinc boinc      8192 Oct 13 17:06 boinc_mmap_file
[2025-10-13 17:06:44] -rw-r--r-- 1 boinc boinc        27 Oct 13 17:06 wrapper_checkpoint.txt
[2025-10-13 17:06:44] -rw------- 1 boinc boinc      4824 Oct 13 17:06 pilotlog.txt
[2025-10-13 17:06:44] -rw------- 1 boinc boinc    569085 Oct 13 17:06 log.46676269._092511.job.log.1
[2025-10-13 17:06:44] -rw------- 1 boinc boinc       357 Oct 13 17:06 output.list
[2025-10-13 17:06:44] -rw-r--r-- 1 boinc boinc       620 Oct 13 17:06 runtime_log
[2025-10-13 17:06:44] -rw------- 1 boinc boinc    849920 Oct 13 17:06 result.tar.gz
[2025-10-13 17:06:44] -rw-r--r-- 1 boinc boinc      8782 Oct 13 17:06 runtime_log.err
[2025-10-13 17:06:44] -rw------- 1 boinc boinc       659 Oct 13 17:06 KAANDm71KS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmw5lNDmVcjELm.diag
[2025-10-13 17:06:44] -rw-r--r-- 1 boinc boinc      6727 Oct 13 17:06 stderr.txt
[2025-10-13 17:06:44] HITS file was successfully produced:
[2025-10-13 17:06:44] -rw------- 1 boinc boinc 197721095 Oct 13 17:05 shared/HITS.pool.root.1
[2025-10-13 17:06:44]  *** Contents of shared directory: ***
[2025-10-13 17:06:44] total 412804
[2025-10-13 17:06:44] -rw-r--r-- 2 boinc boinc 223538270 Oct 13 16:02 ATLAS.root_0
[2025-10-13 17:06:44] -rw-r--r-- 2 boinc boinc    569680 Oct 13 16:02 input.tar.gz
[2025-10-13 17:06:44] -rw-r--r-- 2 boinc boinc     15120 Oct 13 16:02 start_atlas.sh
[2025-10-13 17:06:44] -rw------- 1 boinc boinc 197721095 Oct 13 17:05 HITS.pool.root.1
[2025-10-13 17:06:44] -rw------- 1 boinc boinc    849920 Oct 13 17:06 result.tar.gz
17:06:45 (4075426): run_atlas exited; CPU time 14055.761465
17:06:45 (4075426): called boinc_finish(0)

</stderr_txt>
]]>

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