Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
06:37:04 (4075272): wrapper (7.7.26015): starting
06:37:04 (4075272): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 06:37:04] Arguments: --nthreads 8
[2025-10-13 06:37:04] Threads: 8
[2025-10-13 06:37:04] Checking for CVMFS
[2025-10-13 06:37:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 06:37:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 06:37:06] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 06:37:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 06:37:07] 2.11.5.0 4319 634 174428 151649 3 188 2677032 4194305 18774 130560 0 8857639 99.999 22884 317 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://127.0.0.1:3128 1
[2025-10-13 06:37:07] CVMFS is ok
[2025-10-13 06:37:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 06:37:07] Checking for apptainer binary...
[2025-10-13 06:37:07] apptainer is not installed, using version from CVMFS
[2025-10-13 06:37:07] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 06:37:08] mikemint-desktop
[2025-10-13 06:37:08] apptainer works
[2025-10-13 06:37:08] Set ATHENA_PROC_NUMBER=8
[2025-10-13 06:37:08] Set ATHENA_CORE_NUMBER=8
[2025-10-13 06:37:08] Starting ATLAS job with PandaID=6840969770
[2025-10-13 06:37:08] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/18 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 09:05:38]  *** The last 200 lines of the pilot log: ***
[2025-10-13 09:05:38] 2025-10-13 07:05:00,454 | INFO     | intersect: -78442004835.64297
[2025-10-13 09:05:38] 2025-10-13 07:05:00,455 | INFO     | chi2: 2.2858924797011992
[2025-10-13 09:05:38] 2025-10-13 07:05:00,455 | INFO     | sum of square deviations: 779958810.0
[2025-10-13 09:05:38] 2025-10-13 07:05:00,456 | INFO     | sum of deviations: 37144252217.49999
[2025-10-13 09:05:38] 2025-10-13 07:05:00,456 | INFO     | mean x: 1760334599.5
[2025-10-13 09:05:38] 2025-10-13 07:05:00,456 | INFO     | mean y: 2416673.5220588236
[2025-10-13 09:05:38] 2025-10-13 07:05:00,456 | INFO     | -- intersect: -83830615933.69965
[2025-10-13 09:05:38] 2025-10-13 07:05:00,457 | INFO     | intersect: -83830615933.69965
[2025-10-13 09:05:38] 2025-10-13 07:05:00,457 | INFO     | chi2: 2.287286650402902
[2025-10-13 09:05:38] 2025-10-13 07:05:00,457 | INFO     | current chi2=2.287286650402902 (change=-0.060990213410436936 %)
[2025-10-13 09:05:38] 2025-10-13 07:05:00,457 | INFO     | right removable region: 135
[2025-10-13 09:05:38] 2025-10-13 07:05:00,457 | INFO     | sum of square deviations: 779958810.0
[2025-10-13 09:05:38] 2025-10-13 07:05:00,458 | INFO     | sum of deviations: 8196610016.0
[2025-10-13 09:05:38] 2025-10-13 07:05:00,458 | INFO     | mean x: 1760334904.5
[2025-10-13 09:05:38] 2025-10-13 07:05:00,459 | INFO     | mean y: 2471076.617647059
[2025-10-13 09:05:38] 2025-10-13 07:05:00,459 | INFO     | -- intersect: -18496940077.849735
[2025-10-13 09:05:38] 2025-10-13 07:05:00,459 | INFO     | intersect: -18496940077.849735
[2025-10-13 09:05:38] 2025-10-13 07:05:00,459 | INFO     | chi2: 0.05547745735956141
[2025-10-13 09:05:38] 2025-10-13 07:05:00,459 | INFO     | current chi2=0.05547745735956141 (change=97.57305044518921 %)
[2025-10-13 09:05:38] 2025-10-13 07:05:00,459 | INFO     | sum of square deviations: 697054930.0
[2025-10-13 09:05:38] 2025-10-13 07:05:00,460 | INFO     | sum of deviations: 3269765127.0
[2025-10-13 09:05:38] 2025-10-13 07:05:00,460 | INFO     | mean x: 1760335057.0
[2025-10-13 09:05:38] 2025-10-13 07:05:00,460 | INFO     | mean y: 2480036.2595419846
[2025-10-13 09:05:38] 2025-10-13 07:05:00,461 | INFO     | -- intersect: -8254949806.77185
[2025-10-13 09:05:38] 2025-10-13 07:05:00,461 | INFO     | intersect: -8254949806.77185
[2025-10-13 09:05:38] 2025-10-13 07:05:00,461 | INFO     | chi2: 0.0009158035449724261
[2025-10-13 09:05:38] 2025-10-13 07:05:00,461 | INFO     | current chi2=0.0009158035449724261 (change=98.34923302443926 %)
[2025-10-13 09:05:38] 2025-10-13 07:05:00,461 | INFO     | sum of square deviations: 620244187.5
[2025-10-13 09:05:38] 2025-10-13 07:05:00,462 | INFO     | sum of deviations: 2650274106.5
[2025-10-13 09:05:38] 2025-10-13 07:05:00,462 | INFO     | mean x: 1760335209.5
[2025-10-13 09:05:38] 2025-10-13 07:05:00,462 | INFO     | mean y: 2481257.4206349207
[2025-10-13 09:05:38] 2025-10-13 07:05:00,462 | INFO     | -- intersect: -7519347916.509515
[2025-10-13 09:05:38] 2025-10-13 07:05:00,462 | INFO     | intersect: -7519347916.509515
[2025-10-13 09:05:38] 2025-10-13 07:05:00,464 | INFO     | chi2: 0.0006637894765159448
[2025-10-13 09:05:38] 2025-10-13 07:05:00,464 | INFO     | current chi2=0.0006637894765159448 (change=27.518354765057083 %)
[2025-10-13 09:05:38] 2025-10-13 07:05:00,464 | INFO     | sum of square deviations: 549294020.0
[2025-10-13 09:05:38] 2025-10-13 07:05:00,465 | INFO     | sum of deviations: 2488560026.0000005
[2025-10-13 09:05:38] 2025-10-13 07:05:00,465 | INFO     | mean x: 1760335362.0
[2025-10-13 09:05:38] 2025-10-13 07:05:00,465 | INFO     | mean y: 2481600.347107438
[2025-10-13 09:05:38] 2025-10-13 07:05:00,465 | INFO     | -- intersect: -7972664777.957612
[2025-10-13 09:05:38] 2025-10-13 07:05:00,466 | INFO     | intersect: -7972664777.957612
[2025-10-13 09:05:38] 2025-10-13 07:05:00,466 | INFO     | chi2: 0.0005846867892228927
[2025-10-13 09:05:38] 2025-10-13 07:05:00,466 | INFO     | current chi2=0.0005846867892228927 (change=11.916833588299882 %)
[2025-10-13 09:05:38] 2025-10-13 07:05:00,466 | INFO     | left removable region: 40
[2025-10-13 09:05:38] 2025-10-13 07:05:00,466 | INFO     | sum of square deviations: 265828240.0
[2025-10-13 09:05:38] 2025-10-13 07:05:00,467 | INFO     | sum of deviations: 1527919521.0000002
[2025-10-13 09:05:38] 2025-10-13 07:05:00,467 | INFO     | mean x: 1760335789.0
[2025-10-13 09:05:38] 2025-10-13 07:05:00,467 | INFO     | mean y: 2483238.7263157894
[2025-10-13 09:05:38] 2025-10-13 07:05:00,467 | INFO     | -- intersect: -10115521588.481047
[2025-10-13 09:05:38] 2025-10-13 07:05:00,467 | INFO     | intersect: -10115521588.481047
[2025-10-13 09:05:38] 2025-10-13 07:05:00,467 | INFO     | chi2: 0.00016039003615163117
[2025-10-13 09:05:38] 2025-10-13 07:05:00,468 | INFO     | -- intersect: -10115521588.481047
[2025-10-13 09:05:38] 2025-10-13 07:05:00,468 | INFO     | current memory leak: 5.75 B/s (using 95 data points, chi2=0.00)
[2025-10-13 09:05:38] 2025-10-13 07:05:00,468 | INFO     | could have reported an average CPU frequency of 2367 MHz (8 samples)
[2025-10-13 09:05:38] 2025-10-13 07:05:00,468 | INFO     | ..............................
[2025-10-13 09:05:38] 2025-10-13 07:05:00,469 | INFO     | . Timing measurements:
[2025-10-13 09:05:38] 2025-10-13 07:05:00,469 | INFO     | . get job = 0 s
[2025-10-13 09:05:38] 2025-10-13 07:05:00,469 | INFO     | . initial setup = 2 s
[2025-10-13 09:05:38] 2025-10-13 07:05:00,469 | INFO     | . payload setup = 41 s
[2025-10-13 09:05:38] 2025-10-13 07:05:00,469 | INFO     | . stage-in = 0 s
[2025-10-13 09:05:38] 2025-10-13 07:05:00,469 | INFO     | . payload execution = 8656 s
[2025-10-13 09:05:38] 2025-10-13 07:05:00,469 | INFO     | . stage-out = 1 s
[2025-10-13 09:05:38] 2025-10-13 07:05:00,469 | INFO     | . log creation = 0 s
[2025-10-13 09:05:38] 2025-10-13 07:05:00,469 | INFO     | ..............................
[2025-10-13 09:05:38] 2025-10-13 07:05:00,588 | INFO     | 
[2025-10-13 09:05:38] 2025-10-13 07:05:00,588 | INFO     | job summary report
[2025-10-13 09:05:38] 2025-10-13 07:05:00,588 | INFO     | --------------------------------------------------
[2025-10-13 09:05:38] 2025-10-13 07:05:00,588 | INFO     | PanDA job id: 6840969770
[2025-10-13 09:05:38] 2025-10-13 07:05:00,589 | INFO     | task id: 46676269
[2025-10-13 09:05:38] 2025-10-13 07:05:00,589 | INFO     | errors: (none)
[2025-10-13 09:05:38] 2025-10-13 07:05:00,589 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 09:05:38] 2025-10-13 07:05:00,589 | INFO     | pilot state: finished 
[2025-10-13 09:05:38] 2025-10-13 07:05:00,589 | INFO     | transexitcode: 0
[2025-10-13 09:05:38] 2025-10-13 07:05:00,589 | INFO     | exeerrorcode: 0
[2025-10-13 09:05:38] 2025-10-13 07:05:00,589 | INFO     | exeerrordiag: 
[2025-10-13 09:05:38] 2025-10-13 07:05:00,589 | INFO     | exitcode: 0
[2025-10-13 09:05:38] 2025-10-13 07:05:00,589 | INFO     | exitmsg: OK
[2025-10-13 09:05:38] 2025-10-13 07:05:00,590 | INFO     | cpuconsumptiontime: 44202 s
[2025-10-13 09:05:38] 2025-10-13 07:05:00,590 | INFO     | nevents: 400
[2025-10-13 09:05:38] 2025-10-13 07:05:00,590 | INFO     | neventsw: 0
[2025-10-13 09:05:38] 2025-10-13 07:05:00,590 | INFO     | pid: 4129928
[2025-10-13 09:05:38] 2025-10-13 07:05:00,590 | INFO     | pgrp: 4129928
[2025-10-13 09:05:38] 2025-10-13 07:05:00,590 | INFO     | corecount: 8
[2025-10-13 09:05:38] 2025-10-13 07:05:00,590 | INFO     | event service: False
[2025-10-13 09:05:38] 2025-10-13 07:05:00,590 | INFO     | sizes: {0: 2348028, 1: 2348721, 2: 2348920, 13: 2348920, 24: 2348976, 34: 2349004, 39: 2349422, 45: 2349450, 8701: 2377603, 8703: 2386617, 8705: 2386673, 8715: 238
[2025-10-13 09:05:38] 2025-10-13 07:05:00,590 | INFO     | --------------------------------------------------
[2025-10-13 09:05:38] 2025-10-13 07:05:00,590 | INFO     | 
[2025-10-13 09:05:38] 2025-10-13 07:05:00,591 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/18
[2025-10-13 09:05:38] 2025-10-13 07:05:00,629 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 09:05:38] 2025-10-13 07:05:00,629 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 09:05:38] 2025-10-13 07:05:00,630 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 09:05:38] 2025-10-13 07:05:00,630 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 09:05:38] 2025-10-13 07:05:00,630 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 09:05:38] 2025-10-13 07:05:00,630 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 09:05:38] 2025-10-13 07:05:00,630 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 09:05:38] 2025-10-13 07:05:00,630 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 09:05:38] 2025-10-13 07:05:00,630 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 09:05:38] 2025-10-13 07:05:00,630 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 09:05:38] 2025-10-13 07:05:00,631 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 09:05:38] 2025-10-13 07:05:00,631 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 09:05:38] 2025-10-13 07:05:00,631 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 09:05:38] 2025-10-13 07:05:00,631 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 09:05:38] 2025-10-13 07:05:00,631 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 09:05:38] 2025-10-13 07:05:00,631 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 09:05:38] 2025-10-13 07:05:00,631 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 09:05:38] 2025-10-13 07:05:00,632 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 09:05:38] 2025-10-13 07:05:00,632 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 09:05:38] 2025-10-13 07:05:00,632 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 09:05:38] 2025-10-13 07:05:00,632 | INFO     | job 6840969770 has completed (purged errors)
[2025-10-13 09:05:38] 2025-10-13 07:05:00,632 | INFO     | overall cleanup function is called
[2025-10-13 09:05:38] 2025-10-13 07:05:01,642 | INFO     | --- collectZombieJob: --- 10, [4129928]
[2025-10-13 09:05:38] 2025-10-13 07:05:01,643 | INFO     | zombie collector waiting for pid 4129928
[2025-10-13 09:05:38] 2025-10-13 07:05:01,643 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 09:05:38] 2025-10-13 07:05:01,643 | INFO     | collected zombie processes
[2025-10-13 09:05:38] 2025-10-13 07:05:01,643 | INFO     | will attempt to kill all subprocesses of pid=4129928
[2025-10-13 09:05:38] 2025-10-13 07:05:02,369 | INFO     | process IDs to be killed: [4129928] (in reverse order)
[2025-10-13 09:05:38] 2025-10-13 07:05:02,625 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 09:05:38] 2025-10-13 07:05:02,626 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 09:05:38] 2025-10-13 07:05:02,647 | INFO     | did not find any defunct processes belonging to 4129928
[2025-10-13 09:05:38] 2025-10-13 07:05:02,667 | INFO     | did not find any defunct processes belonging to 4129928
[2025-10-13 09:05:38] 2025-10-13 07:05:02,668 | INFO     | ready for new job
[2025-10-13 09:05:38] 2025-10-13 07:05:02,668 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 09:05:38] 2025-10-13 07:05:02,670 | INFO     | ***************************************
[2025-10-13 09:05:38] 2025-10-13 07:05:02,670 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 09:05:38] 2025-10-13 07:05:02,670 | INFO     | ***************************************
[2025-10-13 09:05:38] 2025-10-13 07:05:02,671 | INFO     | 
[2025-10-13 09:05:38] 2025-10-13 07:05:02,682 | INFO     | architecture information:
[2025-10-13 09:05:38] 2025-10-13 07:05:02,683 | INFO     | executing command: cat /etc/os-release
[2025-10-13 09:05:38] 2025-10-13 07:05:02,701 | INFO     | cat /etc/os-release:
[2025-10-13 09:05:38] NAME="CentOS Linux"
[2025-10-13 09:05:38] VERSION="7 (Core)"
[2025-10-13 09:05:38] ID="centos"
[2025-10-13 09:05:38] ID_LIKE="rhel fedora"
[2025-10-13 09:05:38] VERSION_ID="7"
[2025-10-13 09:05:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 09:05:38] ANSI_COLOR="0;31"
[2025-10-13 09:05:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 09:05:38] HOME_URL="https://www.centos.org/"
[2025-10-13 09:05:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 09:05:38] 
[2025-10-13 09:05:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 09:05:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 09:05:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 09:05:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 09:05:38] 
[2025-10-13 09:05:38] 2025-10-13 07:05:02,701 | INFO     | ***************************************
[2025-10-13 09:05:38] 2025-10-13 07:05:03,204 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/18
[2025-10-13 09:05:38] 2025-10-13 07:05:03,268 | INFO     | sufficient remaining disk space (193959297024 B)
[2025-10-13 09:05:38] 2025-10-13 07:05:03,268 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 09:05:38] 2025-10-13 07:05:03,269 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 09:05:38] 2025-10-13 07:05:03,269 | INFO     | update_server=False
[2025-10-13 09:05:38] 2025-10-13 07:05:03,269 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 09:05:38] 2025-10-13 07:05:03,269 | INFO     | all data control threads have been joined
[2025-10-13 09:05:38] 2025-10-13 07:05:03,270 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 09:05:38] 2025-10-13 07:05:03,270 | INFO     | aborting loop
[2025-10-13 09:05:38] 2025-10-13 07:05:03,270 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 09:05:38] 2025-10-13 07:05:03,873 | INFO     | all job control threads have been joined
[2025-10-13 09:05:38] 2025-10-13 07:05:04,253 | INFO     | all payload control threads have been joined
[2025-10-13 09:05:38] 2025-10-13 07:05:04,274 | INFO     | [job] retrieve thread has finished
[2025-10-13 09:05:38] 2025-10-13 07:05:04,275 | INFO     | [data] control thread has finished
[2025-10-13 09:05:38] 2025-10-13 07:05:04,275 | INFO     | [job] job monitor thread has finished
[2025-10-13 09:05:38] 2025-10-13 07:05:04,877 | INFO     | [job] control thread has finished
[2025-10-13 09:05:38] 2025-10-13 07:05:05,209 | INFO     | [payload] validate_post thread has finished
[2025-10-13 09:05:38] 2025-10-13 07:05:05,257 | INFO     | [payload] control thread has finished
[2025-10-13 09:05:38] 2025-10-13 07:05:05,273 | INFO     | [data] copytool_out thread has finished
[2025-10-13 09:05:38] 2025-10-13 07:05:05,441 | INFO     | [data] copytool_in thread has finished
[2025-10-13 09:05:38] 2025-10-13 07:05:05,449 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 09:05:38] 2025-10-13 07:05:05,485 | INFO     | [job] validate thread has finished
[2025-10-13 09:05:38] 2025-10-13 07:05:05,486 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 09:05:38] 2025-10-13 07:05:05,549 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 09:05:38] 2025-10-13 07:05:05,572 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 09:05:38] 2025-10-13 07:05:05,605 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 09:05:38] 2025-10-13 07:05:05,863 | INFO     | [payload] failed_post thread has finished
[2025-10-13 09:05:38] 2025-10-13 07:05:06,609 | INFO     | [job] queue monitor thread has finished
[2025-10-13 09:05:38] 2025-10-13 07:05:09,557 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 09:05:38] 2025-10-13 07:05:13,641 | INFO     | job.realtimelogging is not enabled
[2025-10-13 09:05:38] 2025-10-13 07:05:14,645 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 09:05:38] 2025-10-13 07:05:32,669 | INFO     | PID=4097146 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 09:05:38] 2025-10-13 07:05:32,669 | INFO     | .. there are 25 such processes running
[2025-10-13 09:05:38] 2025-10-13 07:05:32,669 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 09:05:38] 2025-10-13 07:05:32,669 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 09:05:38] 2025-10-13 07:05:32,669 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 09:05:38] 2025-10-13 07:05:32,845 | INFO     | [monitor] cgroup control has ended
[2025-10-13 09:05:38] 2025-10-13 07:05:32,974 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140027247953728)>', '<ExcThread(monitor, started 140026654480128)>']
[2025-10-13 09:05:38] 2025-10-13 07:05:33,673 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 09:05:38] 2025-10-13 07:05:33,673 | INFO     | [monitor] control thread has ended
[2025-10-13 09:05:38] 2025-10-13 07:05:37,998 | INFO     | all workflow threads have been joined
[2025-10-13 09:05:38] 2025-10-13 07:05:37,999 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 09:05:38] 2025-10-13 07:05:37,999 | INFO     | traces error code: 0
[2025-10-13 09:05:38] 2025-10-13 07:05:37,999 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 09:05:38] 2025-10-13 07:05:38,164 [wrapper] ==== pilot stdout END ====
[2025-10-13 09:05:38] 2025-10-13 07:05:38,169 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 09:05:38] 2025-10-13 07:05:38,173 [wrapper] pilotpid: 4097146
[2025-10-13 09:05:38] 2025-10-13 07:05:38,176 [wrapper] Pilot exit status: 0
[2025-10-13 09:05:38] 2025-10-13 07:05:38,193 [wrapper] pandaids: 6840969770
[2025-10-13 09:05:38] 2025-10-13 07:05:38,335 [wrapper] cleanup supervisor_pilot  431685 4097148
[2025-10-13 09:05:38] 2025-10-13 07:05:38,339 [wrapper] Test setup, not cleaning
[2025-10-13 09:05:38] 2025-10-13 07:05:38,342 [wrapper] apfmon messages muted
[2025-10-13 09:05:38] 2025-10-13 07:05:38,345 [wrapper] ==== wrapper stdout END ====
[2025-10-13 09:05:38] 2025-10-13 07:05:38,348 [wrapper] ==== wrapper stderr END ====
[2025-10-13 09:05:38]  *** Error codes and diagnostics ***
[2025-10-13 09:05:38]     "exeErrorCode": 0,
[2025-10-13 09:05:38]     "exeErrorDiag": "",
[2025-10-13 09:05:38]     "pilotErrorCode": 0,
[2025-10-13 09:05:38]     "pilotErrorDiag": "",
[2025-10-13 09:05:38]  *** Listing of results directory ***
[2025-10-13 09:05:38] insgesamt 405424
[2025-10-13 09:05:38] -rw-r--r-- 1 boinc boinc    557409 Okt 13 01:11 pilot3.tar.gz
[2025-10-13 09:05:38] -rw-r--r-- 1 boinc boinc      5112 Okt 13 01:48 queuedata.json
[2025-10-13 09:05:38] -rwx------ 1 boinc boinc     36292 Okt 13 01:48 runpilot2-wrapper.sh
[2025-10-13 09:05:38] -rw-r--r-- 1 boinc boinc       100 Okt 13 06:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 09:05:38] -rwxr-xr-x 1 boinc boinc      7986 Okt 13 06:37 run_atlas
[2025-10-13 09:05:38] -rw-r--r-- 1 boinc boinc       105 Okt 13 06:37 job.xml
[2025-10-13 09:05:38] -rw-r--r-- 1 boinc boinc      6667 Okt 13 06:37 init_data.xml
[2025-10-13 09:05:38] -rw-r--r-- 2 boinc boinc 217743070 Okt 13 06:37 EVNT.46676267._004667.pool.root.1
[2025-10-13 09:05:38] -rw-r--r-- 2 boinc boinc     15120 Okt 13 06:37 start_atlas.sh
[2025-10-13 09:05:38] drwxrwx--x 2 boinc boinc      4096 Okt 13 06:37 shared
[2025-10-13 09:05:38] -rw-r--r-- 2 boinc boinc    569681 Okt 13 06:37 input.tar.gz
[2025-10-13 09:05:38] -rw-r--r-- 1 boinc boinc         0 Okt 13 06:37 boinc_lockfile
[2025-10-13 09:05:38] -rw-r--r-- 1 boinc boinc      2549 Okt 13 06:37 pandaJob.out
[2025-10-13 09:05:38] -rw------- 1 boinc boinc    974365 Okt 13 06:38 agis_schedconf.cvmfs.json
[2025-10-13 09:05:38] -rw------- 1 boinc boinc   1560580 Okt 13 06:38 agis_ddmendpoints.agis.ALL.json
[2025-10-13 09:05:38] drwx------ 5 boinc boinc      4096 Okt 13 06:38 pilot3
[2025-10-13 09:05:38] -rw------- 1 boinc boinc 190391513 Okt 13 09:04 HITS.46676269._092454.pool.root.1
[2025-10-13 09:05:38] -rw-r--r-- 1 boinc boinc       530 Okt 13 09:04 boinc_task_state.xml
[2025-10-13 09:05:38] -rw------- 1 boinc boinc      1027 Okt 13 09:04 memory_monitor_summary.json
[2025-10-13 09:05:38] -rw------- 1 boinc boinc    376525 Okt 13 09:04 log.46676269._092454.job.log.tgz.1
[2025-10-13 09:05:38] -rw------- 1 boinc boinc        95 Okt 13 09:04 pilot_heartbeat.json
[2025-10-13 09:05:38] -rw------- 1 boinc boinc      7753 Okt 13 09:05 heartbeat.json
[2025-10-13 09:05:38] -rw-r--r-- 1 boinc boinc      8192 Okt 13 09:05 boinc_mmap_file
[2025-10-13 09:05:38] -rw-r--r-- 1 boinc boinc        27 Okt 13 09:05 wrapper_checkpoint.txt
[2025-10-13 09:05:38] -rw------- 1 boinc boinc      4905 Okt 13 09:05 pilotlog.txt
[2025-10-13 09:05:38] -rw------- 1 boinc boinc   1180921 Okt 13 09:05 log.46676269._092454.job.log.1
[2025-10-13 09:05:38] -rw------- 1 boinc boinc       357 Okt 13 09:05 output.list
[2025-10-13 09:05:38] -rw-r--r-- 1 boinc boinc       620 Okt 13 09:05 runtime_log
[2025-10-13 09:05:38] -rw------- 1 boinc boinc   1576960 Okt 13 09:05 result.tar.gz
[2025-10-13 09:05:38] -rw------- 1 boinc boinc       664 Okt 13 09:05 UZqMDm1yKS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmi5lNDmCXA9Mo.diag
[2025-10-13 09:05:38] -rw-r--r-- 1 boinc boinc      8856 Okt 13 09:05 runtime_log.err
[2025-10-13 09:05:38] -rw-r--r-- 1 boinc boinc     20688 Okt 13 09:05 stderr.txt
[2025-10-13 09:05:38] HITS file was successfully produced:
[2025-10-13 09:05:38] -rw------- 1 boinc boinc 190391513 Okt 13 09:04 shared/HITS.pool.root.1
[2025-10-13 09:05:38]  *** Contents of shared directory: ***
[2025-10-13 09:05:38] insgesamt 400696
[2025-10-13 09:05:38] -rw-r--r-- 2 boinc boinc 217743070 Okt 13 06:37 ATLAS.root_0
[2025-10-13 09:05:38] -rw-r--r-- 2 boinc boinc     15120 Okt 13 06:37 start_atlas.sh
[2025-10-13 09:05:38] -rw-r--r-- 2 boinc boinc    569681 Okt 13 06:37 input.tar.gz
[2025-10-13 09:05:38] -rw------- 1 boinc boinc 190391513 Okt 13 09:04 HITS.pool.root.1
[2025-10-13 09:05:38] -rw------- 1 boinc boinc   1576960 Okt 13 09:05 result.tar.gz
09:05:40 (4075272): run_atlas exited; CPU time 44746.408024
09:05:40 (4075272): called boinc_finish(0)

</stderr_txt>
]]>

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