Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
00:30:44 (1935): wrapper (7.7.26015): starting
00:30:44 (1935): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 00:30:44] Arguments: --nthreads 8
[2025-10-13 00:30:44] Threads: 8
[2025-10-13 00:30:44] Checking for CVMFS
[2025-10-13 00:30:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 00:30:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 00:30:45] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 00:30:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 00:30:45] 2.11.2.0 28705 54005 123292 151649 2 59 16738016 18432000 1833 130560 0 49472164 99.976 2421600 37266 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 00:30:45] CVMFS is ok
[2025-10-13 00:30:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 00:30:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 00:30:45] Further information can be found at the LHC@home message board.
[2025-10-13 00:30:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 00:30:45] Checking for apptainer binary...
[2025-10-13 00:30:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 00:30:45] Running /usr/bin/apptainer --version
[2025-10-13 00:30:45] apptainer version 1.3.2-1.el7
[2025-10-13 00:30:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 00:30:46] c-206-27.aglt2.org
[2025-10-13 00:30:46] apptainer works
[2025-10-13 00:30:46] Set ATHENA_PROC_NUMBER=8
[2025-10-13 00:30:46] Set ATHENA_CORE_NUMBER=8
[2025-10-13 00:30:46] Starting ATLAS job with PandaID=6841068602
[2025-10-13 00:30:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 03:40:22]  *** The last 200 lines of the pilot log: ***
[2025-10-13 03:40:22] 2025-10-13 07:39:28,014 | INFO     | fitting pss+swap vs Time
[2025-10-13 03:40:22] 2025-10-13 07:39:28,015 | INFO     | sum of square deviations: 1963274020.0
[2025-10-13 03:40:22] 2025-10-13 07:39:28,016 | INFO     | sum of deviations: 10842485809.000021
[2025-10-13 03:40:22] 2025-10-13 07:39:28,016 | INFO     | mean x: 1760335494.0
[2025-10-13 03:40:22] 2025-10-13 07:39:28,017 | INFO     | mean y: 2496698.237837838
[2025-10-13 03:40:22] 2025-10-13 07:39:28,017 | INFO     | -- intersect: -9719229570.402971
[2025-10-13 03:40:22] 2025-10-13 07:39:28,017 | INFO     | intersect: -9719229570.402971
[2025-10-13 03:40:22] 2025-10-13 07:39:28,017 | INFO     | chi2: 1.4425414557647216
[2025-10-13 03:40:22] 2025-10-13 07:39:28,018 | INFO     | sum of square deviations: 1808350185.0
[2025-10-13 03:40:22] 2025-10-13 07:39:28,019 | INFO     | sum of deviations: 10617458699.999998
[2025-10-13 03:40:22] 2025-10-13 07:39:28,020 | INFO     | mean x: 1760335341.5
[2025-10-13 03:40:22] 2025-10-13 07:39:28,020 | INFO     | mean y: 2496476.677777778
[2025-10-13 03:40:22] 2025-10-13 07:39:28,020 | INFO     | -- intersect: -10333050223.04877
[2025-10-13 03:40:22] 2025-10-13 07:39:28,020 | INFO     | intersect: -10333050223.04877
[2025-10-13 03:40:22] 2025-10-13 07:39:28,021 | INFO     | chi2: 1.4434966364543749
[2025-10-13 03:40:22] 2025-10-13 07:39:28,021 | INFO     | current chi2=1.4434966364543749 (change=-0.06621512926621007 %)
[2025-10-13 03:40:22] 2025-10-13 07:39:28,021 | INFO     | right removable region: 179
[2025-10-13 03:40:22] 2025-10-13 07:39:28,021 | INFO     | sum of square deviations: 1808350185.0
[2025-10-13 03:40:22] 2025-10-13 07:39:28,023 | INFO     | sum of deviations: -15663057900.999998
[2025-10-13 03:40:22] 2025-10-13 07:39:28,023 | INFO     | mean x: 1760335646.5
[2025-10-13 03:40:22] 2025-10-13 07:39:28,023 | INFO     | mean y: 2522453.6
[2025-10-13 03:40:22] 2025-10-13 07:39:28,023 | INFO     | -- intersect: 15249701559.19108
[2025-10-13 03:40:22] 2025-10-13 07:39:28,024 | INFO     | intersect: 15249701559.19108
[2025-10-13 03:40:22] 2025-10-13 07:39:28,024 | INFO     | chi2: 0.08010757335803162
[2025-10-13 03:40:22] 2025-10-13 07:39:28,024 | INFO     | current chi2=0.08010757335803162 (change=94.44677495832762 %)
[2025-10-13 03:40:22] 2025-10-13 07:39:28,025 | INFO     | sum of square deviations: 1661798600.0
[2025-10-13 03:40:22] 2025-10-13 07:39:28,026 | INFO     | sum of deviations: -18607622389.999996
[2025-10-13 03:40:22] 2025-10-13 07:39:28,026 | INFO     | mean x: 1760335799.0
[2025-10-13 03:40:22] 2025-10-13 07:39:28,026 | INFO     | mean y: 2525516.902857143
[2025-10-13 03:40:22] 2025-10-13 07:39:28,027 | INFO     | -- intersect: 19713496405.54781
[2025-10-13 03:40:22] 2025-10-13 07:39:28,027 | INFO     | intersect: 19713496405.54781
[2025-10-13 03:40:22] 2025-10-13 07:39:28,027 | INFO     | chi2: 0.05978276249444435
[2025-10-13 03:40:22] 2025-10-13 07:39:28,027 | INFO     | current chi2=0.05978276249444435 (change=25.37189682771672 %)
[2025-10-13 03:40:22] 2025-10-13 07:39:28,028 | INFO     | sum of square deviations: 1523386702.5
[2025-10-13 03:40:22] 2025-10-13 07:39:28,029 | INFO     | sum of deviations: -15246228827.5
[2025-10-13 03:40:22] 2025-10-13 07:39:28,029 | INFO     | mean x: 1760335951.5
[2025-10-13 03:40:22] 2025-10-13 07:39:28,029 | INFO     | mean y: 2521768.288235294
[2025-10-13 03:40:22] 2025-10-13 07:39:28,030 | INFO     | -- intersect: 17620165854.19225
[2025-10-13 03:40:22] 2025-10-13 07:39:28,030 | INFO     | intersect: 17620165854.19225
[2025-10-13 03:40:22] 2025-10-13 07:39:28,030 | INFO     | chi2: 0.04532730856099113
[2025-10-13 03:40:22] 2025-10-13 07:39:28,030 | INFO     | current chi2=0.04532730856099113 (change=24.179969827919162 %)
[2025-10-13 03:40:22] 2025-10-13 07:39:28,031 | INFO     | left removable region: 30
[2025-10-13 03:40:22] 2025-10-13 07:39:28,031 | INFO     | sum of square deviations: 1025693650.0
[2025-10-13 03:40:22] 2025-10-13 07:39:28,032 | INFO     | sum of deviations: -5582320633.0
[2025-10-13 03:40:22] 2025-10-13 07:39:28,032 | INFO     | mean x: 1760336226.0
[2025-10-13 03:40:22] 2025-10-13 07:39:28,032 | INFO     | mean y: 2510247.174496644
[2025-10-13 03:40:22] 2025-10-13 07:39:28,033 | INFO     | -- intersect: 9583110883.063341
[2025-10-13 03:40:22] 2025-10-13 07:39:28,033 | INFO     | intersect: 9583110883.063341
[2025-10-13 03:40:22] 2025-10-13 07:39:28,033 | INFO     | chi2: 0.02306087513940875
[2025-10-13 03:40:22] 2025-10-13 07:39:28,033 | INFO     | -- intersect: 9583110883.063341
[2025-10-13 03:40:22] 2025-10-13 07:39:28,034 | INFO     | current memory leak: -5.44 B/s (using 149 data points, chi2=0.02)
[2025-10-13 03:40:22] 2025-10-13 07:39:28,034 | INFO     | could have reported an average CPU frequency of 2584 MHz (10 samples)
[2025-10-13 03:40:22] 2025-10-13 07:39:28,034 | INFO     | ..............................
[2025-10-13 03:40:22] 2025-10-13 07:39:28,035 | INFO     | . Timing measurements:
[2025-10-13 03:40:22] 2025-10-13 07:39:28,035 | INFO     | . get job = 0 s
[2025-10-13 03:40:22] 2025-10-13 07:39:28,035 | INFO     | . initial setup = 2 s
[2025-10-13 03:40:22] 2025-10-13 07:39:28,035 | INFO     | . payload setup = 5 s
[2025-10-13 03:40:22] 2025-10-13 07:39:28,035 | INFO     | . stage-in = 0 s
[2025-10-13 03:40:22] 2025-10-13 07:39:28,035 | INFO     | . payload execution = 11280 s
[2025-10-13 03:40:22] 2025-10-13 07:39:28,036 | INFO     | . stage-out = 2 s
[2025-10-13 03:40:22] 2025-10-13 07:39:28,036 | INFO     | . log creation = 0 s
[2025-10-13 03:40:22] 2025-10-13 07:39:28,036 | INFO     | ..............................
[2025-10-13 03:40:22] 2025-10-13 07:39:28,200 | INFO     | 
[2025-10-13 03:40:22] 2025-10-13 07:39:28,200 | INFO     | job summary report
[2025-10-13 03:40:22] 2025-10-13 07:39:28,200 | INFO     | --------------------------------------------------
[2025-10-13 03:40:22] 2025-10-13 07:39:28,201 | INFO     | PanDA job id: 6841068602
[2025-10-13 03:40:22] 2025-10-13 07:39:28,201 | INFO     | task id: 46676269
[2025-10-13 03:40:22] 2025-10-13 07:39:28,201 | INFO     | errors: (none)
[2025-10-13 03:40:22] 2025-10-13 07:39:28,201 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 03:40:22] 2025-10-13 07:39:28,201 | INFO     | pilot state: finished 
[2025-10-13 03:40:22] 2025-10-13 07:39:28,201 | INFO     | transexitcode: 0
[2025-10-13 03:40:22] 2025-10-13 07:39:28,201 | INFO     | exeerrorcode: 0
[2025-10-13 03:40:22] 2025-10-13 07:39:28,202 | INFO     | exeerrordiag: 
[2025-10-13 03:40:22] 2025-10-13 07:39:28,202 | INFO     | exitcode: 0
[2025-10-13 03:40:22] 2025-10-13 07:39:28,202 | INFO     | exitmsg: OK
[2025-10-13 03:40:22] 2025-10-13 07:39:28,202 | INFO     | cpuconsumptiontime: 83185 s
[2025-10-13 03:40:22] 2025-10-13 07:39:28,202 | INFO     | nevents: 400
[2025-10-13 03:40:22] 2025-10-13 07:39:28,202 | INFO     | neventsw: 0
[2025-10-13 03:40:22] 2025-10-13 07:39:28,203 | INFO     | pid: 12283
[2025-10-13 03:40:22] 2025-10-13 07:39:28,203 | INFO     | pgrp: 12283
[2025-10-13 03:40:22] 2025-10-13 07:39:28,203 | INFO     | corecount: 8
[2025-10-13 03:40:22] 2025-10-13 07:39:28,203 | INFO     | event service: False
[2025-10-13 03:40:22] 2025-10-13 07:39:28,203 | INFO     | sizes: {0: 2347976, 1: 2348832, 4: 2349094, 12: 2349122, 11288: 2378508, 11289: 2378507, 11292: 2387689, 11293: 2387745, 11296: 2387939}
[2025-10-13 03:40:22] 2025-10-13 07:39:28,203 | INFO     | --------------------------------------------------
[2025-10-13 03:40:22] 2025-10-13 07:39:28,204 | INFO     | 
[2025-10-13 03:40:22] 2025-10-13 07:39:28,204 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 03:40:22] 2025-10-13 07:39:28,223 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 03:40:22] 2025-10-13 07:39:28,224 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 03:40:22] 2025-10-13 07:39:28,224 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 03:40:22] 2025-10-13 07:39:28,224 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 03:40:22] 2025-10-13 07:39:28,224 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 03:40:22] 2025-10-13 07:39:28,224 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 03:40:22] 2025-10-13 07:39:28,224 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 03:40:22] 2025-10-13 07:39:28,225 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 03:40:22] 2025-10-13 07:39:28,225 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 03:40:22] 2025-10-13 07:39:28,225 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 03:40:22] 2025-10-13 07:39:28,225 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 03:40:22] 2025-10-13 07:39:28,225 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 03:40:22] 2025-10-13 07:39:28,226 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 03:40:22] 2025-10-13 07:39:28,226 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 03:40:22] 2025-10-13 07:39:28,226 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 03:40:22] 2025-10-13 07:39:28,226 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 03:40:22] 2025-10-13 07:39:28,226 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 03:40:22] 2025-10-13 07:39:28,226 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 03:40:22] 2025-10-13 07:39:28,227 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 03:40:22] 2025-10-13 07:39:28,227 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 03:40:22] 2025-10-13 07:39:28,227 | INFO     | job 6841068602 has completed (purged errors)
[2025-10-13 03:40:22] 2025-10-13 07:39:28,227 | INFO     | overall cleanup function is called
[2025-10-13 03:40:22] 2025-10-13 07:39:29,235 | INFO     | --- collectZombieJob: --- 10, [12283]
[2025-10-13 03:40:22] 2025-10-13 07:39:29,235 | INFO     | zombie collector waiting for pid 12283
[2025-10-13 03:40:22] 2025-10-13 07:39:29,236 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 03:40:22] 2025-10-13 07:39:29,236 | INFO     | collected zombie processes
[2025-10-13 03:40:22] 2025-10-13 07:39:29,236 | INFO     | will attempt to kill all subprocesses of pid=12283
[2025-10-13 03:40:22] 2025-10-13 07:39:29,379 | INFO     | process IDs to be killed: [12283] (in reverse order)
[2025-10-13 03:40:22] 2025-10-13 07:39:29,434 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 03:40:22] 2025-10-13 07:39:29,435 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 03:40:22] 2025-10-13 07:39:29,437 | INFO     | did not find any defunct processes belonging to 12283
[2025-10-13 03:40:22] 2025-10-13 07:39:29,440 | INFO     | did not find any defunct processes belonging to 12283
[2025-10-13 03:40:22] 2025-10-13 07:39:29,440 | INFO     | ready for new job
[2025-10-13 03:40:22] 2025-10-13 07:39:29,440 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 03:40:22] 2025-10-13 07:39:29,441 | INFO     | ***************************************
[2025-10-13 03:40:22] 2025-10-13 07:39:29,442 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 03:40:22] 2025-10-13 07:39:29,442 | INFO     | ***************************************
[2025-10-13 03:40:22] 2025-10-13 07:39:29,442 | INFO     | 
[2025-10-13 03:40:22] 2025-10-13 07:39:29,443 | INFO     | architecture information:
[2025-10-13 03:40:22] 2025-10-13 07:39:29,443 | INFO     | executing command: cat /etc/os-release
[2025-10-13 03:40:22] 2025-10-13 07:39:29,452 | INFO     | cat /etc/os-release:
[2025-10-13 03:40:22] NAME="CentOS Linux"
[2025-10-13 03:40:22] VERSION="7 (Core)"
[2025-10-13 03:40:22] ID="centos"
[2025-10-13 03:40:22] ID_LIKE="rhel fedora"
[2025-10-13 03:40:22] VERSION_ID="7"
[2025-10-13 03:40:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 03:40:22] ANSI_COLOR="0;31"
[2025-10-13 03:40:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 03:40:22] HOME_URL="https://www.centos.org/"
[2025-10-13 03:40:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 03:40:22] 
[2025-10-13 03:40:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 03:40:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 03:40:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 03:40:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 03:40:22] 
[2025-10-13 03:40:22] 2025-10-13 07:39:29,453 | INFO     | ***************************************
[2025-10-13 03:40:22] 2025-10-13 07:39:29,955 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 03:40:22] 2025-10-13 07:39:29,969 | INFO     | sufficient remaining disk space (28222423040 B)
[2025-10-13 03:40:22] 2025-10-13 07:39:29,969 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 03:40:22] 2025-10-13 07:39:29,969 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 03:40:22] 2025-10-13 07:39:29,969 | INFO     | update_server=False
[2025-10-13 03:40:22] 2025-10-13 07:39:29,969 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 03:40:22] 2025-10-13 07:39:29,970 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 03:40:22] 2025-10-13 07:39:29,970 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 03:40:22] 2025-10-13 07:39:30,301 | INFO     | all job control threads have been joined
[2025-10-13 03:40:22] 2025-10-13 07:39:30,369 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 03:40:22] 2025-10-13 07:39:30,370 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 03:40:22] 2025-10-13 07:39:30,370 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 03:40:22] 2025-10-13 07:39:30,370 | INFO     | will abort loop
[2025-10-13 03:40:22] 2025-10-13 07:39:30,399 | INFO     | all data control threads have been joined
[2025-10-13 03:40:22] 2025-10-13 07:39:30,447 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 03:40:22] 2025-10-13 07:39:30,833 | INFO     | all payload control threads have been joined
[2025-10-13 03:40:22] 2025-10-13 07:39:30,970 | INFO     | [job] queue monitor thread has finished
[2025-10-13 03:40:22] 2025-10-13 07:39:30,974 | INFO     | [job] retrieve thread has finished
[2025-10-13 03:40:22] 2025-10-13 07:39:31,088 | INFO     | [payload] validate_post thread has finished
[2025-10-13 03:40:22] 2025-10-13 07:39:31,307 | INFO     | [job] control thread has finished
[2025-10-13 03:40:22] 2025-10-13 07:39:31,371 | INFO     | [job] job monitor thread has finished
[2025-10-13 03:40:22] 2025-10-13 07:39:31,407 | INFO     | [data] control thread has finished
[2025-10-13 03:40:22] 2025-10-13 07:39:31,683 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 03:40:22] 2025-10-13 07:39:31,683 | INFO     | [job] validate thread has finished
[2025-10-13 03:40:22] 2025-10-13 07:39:31,693 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 03:40:22] 2025-10-13 07:39:31,837 | INFO     | [payload] control thread has finished
[2025-10-13 03:40:22] 2025-10-13 07:39:31,908 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 03:40:22] 2025-10-13 07:39:31,976 | INFO     | [data] copytool_out thread has finished
[2025-10-13 03:40:22] 2025-10-13 07:39:32,358 | INFO     | [data] copytool_in thread has finished
[2025-10-13 03:40:22] 2025-10-13 07:39:32,504 | INFO     | [payload] failed_post thread has finished
[2025-10-13 03:40:22] 2025-10-13 07:39:34,452 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 03:40:22] 2025-10-13 07:39:40,538 | INFO     | job.realtimelogging is not enabled
[2025-10-13 03:40:22] 2025-10-13 07:39:41,544 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 03:40:22] 2025-10-13 07:40:00,258 | INFO     | PID=5808 has CPU usage=4.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-13 03:40:22] 2025-10-13 07:40:00,258 | INFO     | .. there are 3 such processes running
[2025-10-13 03:40:22] 2025-10-13 07:40:00,259 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 03:40:22] 2025-10-13 07:40:00,259 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 03:40:22] 2025-10-13 07:40:00,259 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 03:40:22] 2025-10-13 07:40:15,386 | INFO     | [monitor] cgroup control has ended
[2025-10-13 03:40:22] 2025-10-13 07:40:16,904 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140017245808448)>', '<ExcThread(monitor, started 140016672044800)>']
[2025-10-13 03:40:22] 2025-10-13 07:40:17,336 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 03:40:22] 2025-10-13 07:40:17,336 | INFO     | [monitor] control thread has ended
[2025-10-13 03:40:22] 2025-10-13 07:40:21,924 | INFO     | all workflow threads have been joined
[2025-10-13 03:40:22] 2025-10-13 07:40:21,924 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 03:40:22] 2025-10-13 07:40:21,924 | INFO     | traces error code: 0
[2025-10-13 03:40:22] 2025-10-13 07:40:21,925 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 03:40:22] 2025-10-13 07:40:22,011 [wrapper] ==== pilot stdout END ====
[2025-10-13 03:40:22] 2025-10-13 07:40:22,014 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 03:40:22] 2025-10-13 07:40:22,016 [wrapper] pilotpid: 5808
[2025-10-13 03:40:22] 2025-10-13 07:40:22,018 [wrapper] Pilot exit status: 0
[2025-10-13 03:40:22] 2025-10-13 07:40:22,027 [wrapper] pandaids: 6841068602
[2025-10-13 03:40:22] 2025-10-13 07:40:22,066 [wrapper] cleanup supervisor_pilot 19650 5809
[2025-10-13 03:40:22] 2025-10-13 07:40:22,069 [wrapper] Test setup, not cleaning
[2025-10-13 03:40:22] 2025-10-13 07:40:22,071 [wrapper] apfmon messages muted
[2025-10-13 03:40:22] 2025-10-13 07:40:22,073 [wrapper] ==== wrapper stdout END ====
[2025-10-13 03:40:22] 2025-10-13 07:40:22,075 [wrapper] ==== wrapper stderr END ====
[2025-10-13 03:40:22]  *** Error codes and diagnostics ***
[2025-10-13 03:40:22]     "exeErrorCode": 0,
[2025-10-13 03:40:22]     "exeErrorDiag": "",
[2025-10-13 03:40:22]     "pilotErrorCode": 0,
[2025-10-13 03:40:22]     "pilotErrorDiag": "",
[2025-10-13 03:40:22]  *** Listing of results directory ***
[2025-10-13 03:40:22] total 420032
[2025-10-13 03:40:22] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 20:02 pilot3.tar.gz
[2025-10-13 03:40:22] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 20:06 queuedata.json
[2025-10-13 03:40:22] -rwx------ 1 boincer umatlas     36292 Oct 12 20:07 runpilot2-wrapper.sh
[2025-10-13 03:40:22] -rw-r--r-- 1 boincer umatlas       100 Oct 13 00:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 03:40:22] -rwxr-xr-x 1 boincer umatlas      7986 Oct 13 00:30 run_atlas
[2025-10-13 03:40:22] -rw-r--r-- 1 boincer umatlas       105 Oct 13 00:30 job.xml
[2025-10-13 03:40:22] -rw-r--r-- 2 boincer umatlas 221765407 Oct 13 00:30 EVNT.46676267._000938.pool.root.1
[2025-10-13 03:40:22] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 00:30 start_atlas.sh
[2025-10-13 03:40:22] drwxrwx--x 2 boincer umatlas      4096 Oct 13 00:30 shared
[2025-10-13 03:40:22] -rw-r--r-- 2 boincer umatlas    569681 Oct 13 00:30 input.tar.gz
[2025-10-13 03:40:22] -rw-r--r-- 1 boincer umatlas         0 Oct 13 00:30 boinc_lockfile
[2025-10-13 03:40:22] -rw-r--r-- 1 boincer umatlas      2548 Oct 13 00:30 pandaJob.out
[2025-10-13 03:40:22] -rw------- 1 boincer umatlas    974365 Oct 13 00:30 agis_schedconf.cvmfs.json
[2025-10-13 03:40:22] drwx------ 5 boincer umatlas      4096 Oct 13 00:30 pilot3
[2025-10-13 03:40:22] -rw-r--r-- 1 boincer umatlas      5952 Oct 13 03:36 init_data.xml
[2025-10-13 03:40:22] -rw------- 1 boincer umatlas 200410262 Oct 13 03:38 HITS.46676269._092838.pool.root.1
[2025-10-13 03:40:22] -rw-r--r-- 1 boincer umatlas       531 Oct 13 03:39 boinc_task_state.xml
[2025-10-13 03:40:22] -rw------- 1 boincer umatlas      1067 Oct 13 03:39 memory_monitor_summary.json
[2025-10-13 03:40:22] -rw------- 1 boincer umatlas   1560580 Oct 13 03:39 agis_ddmendpoints.agis.ALL.json
[2025-10-13 03:40:22] -rw------- 1 boincer umatlas    423087 Oct 13 03:39 log.46676269._092838.job.log.tgz.1
[2025-10-13 03:40:22] -rw------- 1 boincer umatlas      7854 Oct 13 03:39 heartbeat.json
[2025-10-13 03:40:22] -rw------- 1 boincer umatlas        95 Oct 13 03:40 pilot_heartbeat.json
[2025-10-13 03:40:22] -rw-r--r-- 1 boincer umatlas      8192 Oct 13 03:40 boinc_mmap_file
[2025-10-13 03:40:22] -rw-r--r-- 1 boincer umatlas        28 Oct 13 03:40 wrapper_checkpoint.txt
[2025-10-13 03:40:22] -rw------- 1 boincer umatlas      5078 Oct 13 03:40 pilotlog.txt
[2025-10-13 03:40:22] -rw------- 1 boincer umatlas   1592754 Oct 13 03:40 log.46676269._092838.job.log.1
[2025-10-13 03:40:22] -rw------- 1 boincer umatlas       357 Oct 13 03:40 output.list
[2025-10-13 03:40:22] -rw-r--r-- 1 boincer umatlas       620 Oct 13 03:40 runtime_log
[2025-10-13 03:40:22] -rw------- 1 boincer umatlas   2037760 Oct 13 03:40 result.tar.gz
[2025-10-13 03:40:22] -rw-r--r-- 1 boincer umatlas      8704 Oct 13 03:40 runtime_log.err
[2025-10-13 03:40:22] -rw------- 1 boincer umatlas       662 Oct 13 03:40 pucLDmeHLS8n9Rq4apOajLDm4fhM0noT9bVof3QYDm8KVMDmtQgs8n.diag
[2025-10-13 03:40:22] -rw-r--r-- 1 boincer umatlas     20905 Oct 13 03:40 stderr.txt
[2025-10-13 03:40:22] HITS file was successfully produced:
[2025-10-13 03:40:22] -rw------- 1 boincer umatlas 200410262 Oct 13 03:38 shared/HITS.pool.root.1
[2025-10-13 03:40:22]  *** Contents of shared directory: ***
[2025-10-13 03:40:22] total 414860
[2025-10-13 03:40:22] -rw-r--r-- 2 boincer umatlas 221765407 Oct 13 00:30 ATLAS.root_0
[2025-10-13 03:40:22] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 00:30 start_atlas.sh
[2025-10-13 03:40:22] -rw-r--r-- 2 boincer umatlas    569681 Oct 13 00:30 input.tar.gz
[2025-10-13 03:40:22] -rw------- 1 boincer umatlas 200410262 Oct 13 03:38 HITS.pool.root.1
[2025-10-13 03:40:22] -rw------- 1 boincer umatlas   2037760 Oct 13 03:40 result.tar.gz
03:40:23 (1935): run_atlas exited; CPU time 83318.234690
03:40:23 (1935): called boinc_finish(0)

</stderr_txt>
]]>

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