Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
00:47:06 (5914): wrapper (7.7.26015): starting
00:47:06 (5914): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 00:47:06] Arguments: --nthreads 8
[2025-10-13 00:47:06] Threads: 8
[2025-10-13 00:47:06] Checking for CVMFS
[2025-10-13 00:47:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 00:47:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 00:47:06] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 00:47:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 00:47:06] 2.11.2.0 28705 54022 123844 151649 2 188 16739064 18432001 1833 130560 0 49544143 99.976 2421682 37262 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 00:47:06] CVMFS is ok
[2025-10-13 00:47:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 00:47:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 00:47:06] Further information can be found at the LHC@home message board.
[2025-10-13 00:47:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 00:47:06] Checking for apptainer binary...
[2025-10-13 00:47:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 00:47:06] Running /usr/bin/apptainer --version
[2025-10-13 00:47:06] apptainer version 1.3.2-1.el7
[2025-10-13 00:47:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 00:47:07] c-206-27.aglt2.org
[2025-10-13 00:47:07] apptainer works
[2025-10-13 00:47:07] Set ATHENA_PROC_NUMBER=8
[2025-10-13 00:47:07] Set ATHENA_CORE_NUMBER=8
[2025-10-13 00:47:07] Starting ATLAS job with PandaID=6840969209
[2025-10-13 00:47:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 03:49:42]  *** The last 200 lines of the pilot log: ***
[2025-10-13 03:49:42] 2025-10-13 07:48:48,493 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 03:49:42] 2025-10-13 07:48:48,494 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 03:49:42] 2025-10-13 07:48:48,494 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 03:49:42] 2025-10-13 07:48:48,497 | INFO     | fitting pss+swap vs Time
[2025-10-13 03:49:42] 2025-10-13 07:48:48,497 | INFO     | sum of square deviations: 1748737904.5
[2025-10-13 03:49:42] 2025-10-13 07:48:48,498 | INFO     | sum of deviations: 21298472781.499992
[2025-10-13 03:49:42] 2025-10-13 07:48:48,498 | INFO     | mean x: 1760336261.5
[2025-10-13 03:49:42] 2025-10-13 07:48:48,498 | INFO     | mean y: 2473193.1853932585
[2025-10-13 03:49:42] 2025-10-13 07:48:48,498 | INFO     | -- intersect: -21437259916.828636
[2025-10-13 03:49:42] 2025-10-13 07:48:48,498 | INFO     | intersect: -21437259916.828636
[2025-10-13 03:49:42] 2025-10-13 07:48:48,498 | INFO     | chi2: 1.4778602350297776
[2025-10-13 03:49:42] 2025-10-13 07:48:48,499 | INFO     | sum of square deviations: 1605470102.0
[2025-10-13 03:49:42] 2025-10-13 07:48:48,500 | INFO     | sum of deviations: 20582242410.000008
[2025-10-13 03:49:42] 2025-10-13 07:48:48,500 | INFO     | mean x: 1760336109.0
[2025-10-13 03:49:42] 2025-10-13 07:48:48,500 | INFO     | mean y: 2472430.4682080923
[2025-10-13 03:49:42] 2025-10-13 07:48:48,500 | INFO     | -- intersect: -22565163350.091595
[2025-10-13 03:49:42] 2025-10-13 07:48:48,500 | INFO     | intersect: -22565163350.091595
[2025-10-13 03:49:42] 2025-10-13 07:48:48,500 | INFO     | chi2: 1.4791053087904902
[2025-10-13 03:49:42] 2025-10-13 07:48:48,500 | INFO     | current chi2=1.4791053087904902 (change=-0.08424841072251343 %)
[2025-10-13 03:49:42] 2025-10-13 07:48:48,500 | INFO     | right removable region: 172
[2025-10-13 03:49:42] 2025-10-13 07:48:48,501 | INFO     | sum of square deviations: 1605470102.0
[2025-10-13 03:49:42] 2025-10-13 07:48:48,501 | INFO     | sum of deviations: -6478142903.999999
[2025-10-13 03:49:42] 2025-10-13 07:48:48,502 | INFO     | mean x: 1760336414.0
[2025-10-13 03:49:42] 2025-10-13 07:48:48,502 | INFO     | mean y: 2502416.5606936417
[2025-10-13 03:49:42] 2025-10-13 07:48:48,502 | INFO     | -- intersect: 7105537742.3514595
[2025-10-13 03:49:42] 2025-10-13 07:48:48,502 | INFO     | intersect: 7105537742.3514595
[2025-10-13 03:49:42] 2025-10-13 07:48:48,502 | INFO     | chi2: 0.033411203055340975
[2025-10-13 03:49:42] 2025-10-13 07:48:48,502 | INFO     | current chi2=0.033411203055340975 (change=97.73921767002088 %)
[2025-10-13 03:49:42] 2025-10-13 07:48:48,503 | INFO     | sum of square deviations: 1470248962.0
[2025-10-13 03:49:42] 2025-10-13 07:48:48,503 | INFO     | sum of deviations: -6787826667.0
[2025-10-13 03:49:42] 2025-10-13 07:48:48,503 | INFO     | mean x: 1760336566.5
[2025-10-13 03:49:42] 2025-10-13 07:48:48,504 | INFO     | mean y: 2502720.25
[2025-10-13 03:49:42] 2025-10-13 07:48:48,504 | INFO     | -- intersect: 8129602142.057938
[2025-10-13 03:49:42] 2025-10-13 07:48:48,504 | INFO     | intersect: 8129602142.057938
[2025-10-13 03:49:42] 2025-10-13 07:48:48,504 | INFO     | chi2: 0.0213059787603409
[2025-10-13 03:49:42] 2025-10-13 07:48:48,504 | INFO     | current chi2=0.0213059787603409 (change=36.231033868937516 %)
[2025-10-13 03:49:42] 2025-10-13 07:48:48,504 | INFO     | sum of square deviations: 1342841922.0
[2025-10-13 03:49:42] 2025-10-13 07:48:48,505 | INFO     | sum of deviations: -4561632643.0
[2025-10-13 03:49:42] 2025-10-13 07:48:48,505 | INFO     | mean x: 1760336719.0
[2025-10-13 03:49:42] 2025-10-13 07:48:48,505 | INFO     | mean y: 2500050.1595092025
[2025-10-13 03:49:42] 2025-10-13 07:48:48,505 | INFO     | -- intersect: 5982362093.863205
[2025-10-13 03:49:42] 2025-10-13 07:48:48,506 | INFO     | intersect: 5982362093.863205
[2025-10-13 03:49:42] 2025-10-13 07:48:48,506 | INFO     | chi2: 0.017663923745963955
[2025-10-13 03:49:42] 2025-10-13 07:48:48,506 | INFO     | current chi2=0.017663923745963955 (change=17.0940516525638 %)
[2025-10-13 03:49:42] 2025-10-13 07:48:48,506 | INFO     | left removable region: 30
[2025-10-13 03:49:42] 2025-10-13 07:48:48,506 | INFO     | sum of square deviations: 887813855.5
[2025-10-13 03:49:42] 2025-10-13 07:48:48,507 | INFO     | sum of deviations: 1594968220.0000002
[2025-10-13 03:49:42] 2025-10-13 07:48:48,507 | INFO     | mean x: 1760336993.5
[2025-10-13 03:49:42] 2025-10-13 07:48:48,507 | INFO     | mean y: 2491090.1267605633
[2025-10-13 03:49:42] 2025-10-13 07:48:48,507 | INFO     | -- intersect: -3159975392.829415
[2025-10-13 03:49:42] 2025-10-13 07:48:48,507 | INFO     | intersect: -3159975392.829415
[2025-10-13 03:49:42] 2025-10-13 07:48:48,508 | INFO     | chi2: 6.909036306832907e-05
[2025-10-13 03:49:42] 2025-10-13 07:48:48,508 | INFO     | -- intersect: -3159975392.829415
[2025-10-13 03:49:42] 2025-10-13 07:48:48,508 | INFO     | current memory leak: 1.80 B/s (using 142 data points, chi2=0.00)
[2025-10-13 03:49:42] 2025-10-13 07:48:48,508 | INFO     | could have reported an average CPU frequency of 2580 MHz (9 samples)
[2025-10-13 03:49:42] 2025-10-13 07:48:48,508 | INFO     | ..............................
[2025-10-13 03:49:42] 2025-10-13 07:48:48,508 | INFO     | . Timing measurements:
[2025-10-13 03:49:42] 2025-10-13 07:48:48,508 | INFO     | . get job = 0 s
[2025-10-13 03:49:42] 2025-10-13 07:48:48,509 | INFO     | . initial setup = 2 s
[2025-10-13 03:49:42] 2025-10-13 07:48:48,509 | INFO     | . payload setup = 5 s
[2025-10-13 03:49:42] 2025-10-13 07:48:48,509 | INFO     | . stage-in = 0 s
[2025-10-13 03:49:42] 2025-10-13 07:48:48,509 | INFO     | . payload execution = 10854 s
[2025-10-13 03:49:42] 2025-10-13 07:48:48,509 | INFO     | . stage-out = 2 s
[2025-10-13 03:49:42] 2025-10-13 07:48:48,509 | INFO     | . log creation = 0 s
[2025-10-13 03:49:42] 2025-10-13 07:48:48,509 | INFO     | ..............................
[2025-10-13 03:49:42] 2025-10-13 07:48:48,743 | INFO     | 
[2025-10-13 03:49:42] 2025-10-13 07:48:48,743 | INFO     | job summary report
[2025-10-13 03:49:42] 2025-10-13 07:48:48,743 | INFO     | --------------------------------------------------
[2025-10-13 03:49:42] 2025-10-13 07:48:48,744 | INFO     | PanDA job id: 6840969209
[2025-10-13 03:49:42] 2025-10-13 07:48:48,744 | INFO     | task id: 46676269
[2025-10-13 03:49:42] 2025-10-13 07:48:48,744 | INFO     | errors: (none)
[2025-10-13 03:49:42] 2025-10-13 07:48:48,744 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 03:49:42] 2025-10-13 07:48:48,744 | INFO     | pilot state: finished 
[2025-10-13 03:49:42] 2025-10-13 07:48:48,744 | INFO     | transexitcode: 0
[2025-10-13 03:49:42] 2025-10-13 07:48:48,745 | INFO     | exeerrorcode: 0
[2025-10-13 03:49:42] 2025-10-13 07:48:48,745 | INFO     | exeerrordiag: 
[2025-10-13 03:49:42] 2025-10-13 07:48:48,745 | INFO     | exitcode: 0
[2025-10-13 03:49:42] 2025-10-13 07:48:48,745 | INFO     | exitmsg: OK
[2025-10-13 03:49:42] 2025-10-13 07:48:48,745 | INFO     | cpuconsumptiontime: 81877 s
[2025-10-13 03:49:42] 2025-10-13 07:48:48,745 | INFO     | nevents: 400
[2025-10-13 03:49:42] 2025-10-13 07:48:48,746 | INFO     | neventsw: 0
[2025-10-13 03:49:42] 2025-10-13 07:48:48,746 | INFO     | pid: 17288
[2025-10-13 03:49:42] 2025-10-13 07:48:48,746 | INFO     | pgrp: 17288
[2025-10-13 03:49:42] 2025-10-13 07:48:48,746 | INFO     | corecount: 8
[2025-10-13 03:49:42] 2025-10-13 07:48:48,746 | INFO     | event service: False
[2025-10-13 03:49:42] 2025-10-13 07:48:48,746 | INFO     | sizes: {0: 2348857, 4: 2349119, 11: 2349147, 10863: 2378277, 10866: 2387275, 10869: 2387331, 10876: 2387717}
[2025-10-13 03:49:42] 2025-10-13 07:48:48,747 | INFO     | --------------------------------------------------
[2025-10-13 03:49:42] 2025-10-13 07:48:48,747 | INFO     | 
[2025-10-13 03:49:42] 2025-10-13 07:48:48,747 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-13 03:49:42] 2025-10-13 07:48:48,774 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 03:49:42] 2025-10-13 07:48:48,775 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 03:49:42] 2025-10-13 07:48:48,775 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 03:49:42] 2025-10-13 07:48:48,775 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 03:49:42] 2025-10-13 07:48:48,775 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 03:49:42] 2025-10-13 07:48:48,776 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 03:49:42] 2025-10-13 07:48:48,776 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 03:49:42] 2025-10-13 07:48:48,776 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 03:49:42] 2025-10-13 07:48:48,776 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 03:49:42] 2025-10-13 07:48:48,776 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 03:49:42] 2025-10-13 07:48:48,777 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 03:49:42] 2025-10-13 07:48:48,777 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 03:49:42] 2025-10-13 07:48:48,777 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 03:49:42] 2025-10-13 07:48:48,777 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 03:49:42] 2025-10-13 07:48:48,777 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 03:49:42] 2025-10-13 07:48:48,777 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 03:49:42] 2025-10-13 07:48:48,778 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 03:49:42] 2025-10-13 07:48:48,778 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 03:49:42] 2025-10-13 07:48:48,778 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 03:49:42] 2025-10-13 07:48:48,778 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 03:49:42] 2025-10-13 07:48:48,778 | INFO     | job 6840969209 has completed (purged errors)
[2025-10-13 03:49:42] 2025-10-13 07:48:48,779 | INFO     | overall cleanup function is called
[2025-10-13 03:49:42] 2025-10-13 07:48:49,786 | INFO     | --- collectZombieJob: --- 10, [17288]
[2025-10-13 03:49:42] 2025-10-13 07:48:49,786 | INFO     | zombie collector waiting for pid 17288
[2025-10-13 03:49:42] 2025-10-13 07:48:49,786 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 03:49:42] 2025-10-13 07:48:49,787 | INFO     | collected zombie processes
[2025-10-13 03:49:42] 2025-10-13 07:48:49,787 | INFO     | will attempt to kill all subprocesses of pid=17288
[2025-10-13 03:49:42] 2025-10-13 07:48:49,950 | INFO     | process IDs to be killed: [17288] (in reverse order)
[2025-10-13 03:49:42] 2025-10-13 07:48:50,023 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 03:49:42] 2025-10-13 07:48:50,023 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 03:49:42] 2025-10-13 07:48:50,029 | INFO     | did not find any defunct processes belonging to 17288
[2025-10-13 03:49:42] 2025-10-13 07:48:50,034 | INFO     | did not find any defunct processes belonging to 17288
[2025-10-13 03:49:42] 2025-10-13 07:48:50,034 | INFO     | ready for new job
[2025-10-13 03:49:42] 2025-10-13 07:48:50,034 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 03:49:42] 2025-10-13 07:48:50,036 | INFO     | ***************************************
[2025-10-13 03:49:42] 2025-10-13 07:48:50,036 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 03:49:42] 2025-10-13 07:48:50,036 | INFO     | ***************************************
[2025-10-13 03:49:42] 2025-10-13 07:48:50,036 | INFO     | 
[2025-10-13 03:49:42] 2025-10-13 07:48:50,038 | INFO     | architecture information:
[2025-10-13 03:49:42] 2025-10-13 07:48:50,038 | INFO     | executing command: cat /etc/os-release
[2025-10-13 03:49:42] 2025-10-13 07:48:50,055 | INFO     | cat /etc/os-release:
[2025-10-13 03:49:42] NAME="CentOS Linux"
[2025-10-13 03:49:42] VERSION="7 (Core)"
[2025-10-13 03:49:42] ID="centos"
[2025-10-13 03:49:42] ID_LIKE="rhel fedora"
[2025-10-13 03:49:42] VERSION_ID="7"
[2025-10-13 03:49:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 03:49:42] ANSI_COLOR="0;31"
[2025-10-13 03:49:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 03:49:42] HOME_URL="https://www.centos.org/"
[2025-10-13 03:49:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 03:49:42] 
[2025-10-13 03:49:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 03:49:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 03:49:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 03:49:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 03:49:42] 
[2025-10-13 03:49:42] 2025-10-13 07:48:50,055 | INFO     | ***************************************
[2025-10-13 03:49:42] 2025-10-13 07:48:50,558 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-13 03:49:42] 2025-10-13 07:48:50,576 | INFO     | sufficient remaining disk space (28176285696 B)
[2025-10-13 03:49:42] 2025-10-13 07:48:50,576 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 03:49:42] 2025-10-13 07:48:50,577 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 03:49:42] 2025-10-13 07:48:50,577 | INFO     | update_server=False
[2025-10-13 03:49:42] 2025-10-13 07:48:50,577 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 03:49:42] 2025-10-13 07:48:50,577 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 03:49:42] 2025-10-13 07:48:50,577 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 03:49:42] 2025-10-13 07:48:51,065 | INFO     | all data control threads have been joined
[2025-10-13 03:49:42] 2025-10-13 07:48:51,135 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 03:49:42] 2025-10-13 07:48:51,135 | INFO     | aborting loop
[2025-10-13 03:49:42] 2025-10-13 07:48:51,578 | INFO     | [job] retrieve thread has finished
[2025-10-13 03:49:42] 2025-10-13 07:48:51,582 | INFO     | [job] queue monitor thread has finished
[2025-10-13 03:49:42] 2025-10-13 07:48:51,706 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 03:49:42] 2025-10-13 07:48:51,820 | INFO     | all payload control threads have been joined
[2025-10-13 03:49:42] 2025-10-13 07:48:52,071 | INFO     | [data] control thread has finished
[2025-10-13 03:49:42] 2025-10-13 07:48:52,141 | INFO     | [job] job monitor thread has finished
[2025-10-13 03:49:42] 2025-10-13 07:48:52,150 | INFO     | all job control threads have been joined
[2025-10-13 03:49:42] 2025-10-13 07:48:52,196 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 03:49:42] 2025-10-13 07:48:52,237 | INFO     | [job] validate thread has finished
[2025-10-13 03:49:42] 2025-10-13 07:48:52,272 | INFO     | [data] copytool_in thread has finished
[2025-10-13 03:49:42] 2025-10-13 07:48:52,280 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 03:49:42] 2025-10-13 07:48:52,361 | INFO     | [payload] failed_post thread has finished
[2025-10-13 03:49:42] 2025-10-13 07:48:52,584 | INFO     | [data] copytool_out thread has finished
[2025-10-13 03:49:42] 2025-10-13 07:48:52,710 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 03:49:42] 2025-10-13 07:48:52,777 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 03:49:42] 2025-10-13 07:48:52,825 | INFO     | [payload] control thread has finished
[2025-10-13 03:49:42] 2025-10-13 07:48:52,902 | INFO     | [payload] validate_post thread has finished
[2025-10-13 03:49:42] 2025-10-13 07:48:53,155 | INFO     | [job] control thread has finished
[2025-10-13 03:49:42] 2025-10-13 07:48:56,783 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 03:49:42] 2025-10-13 07:49:21,329 | INFO     | PID=9598 has CPU usage=5.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-13 03:49:42] 2025-10-13 07:49:21,329 | INFO     | .. there are 3 such processes running
[2025-10-13 03:49:42] 2025-10-13 07:49:21,330 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 03:49:42] 2025-10-13 07:49:21,330 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 03:49:42] 2025-10-13 07:49:21,331 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 03:49:42] 2025-10-13 07:49:35,305 | INFO     | [monitor] cgroup control has ended
[2025-10-13 03:49:42] 2025-10-13 07:49:36,918 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140077251573568)>', '<ExcThread(monitor, started 140076466042624)>']
[2025-10-13 03:49:42] 2025-10-13 07:49:37,399 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 03:49:42] 2025-10-13 07:49:37,399 | INFO     | [monitor] control thread has ended
[2025-10-13 03:49:42] 2025-10-13 07:49:41,943 | INFO     | all workflow threads have been joined
[2025-10-13 03:49:42] 2025-10-13 07:49:41,943 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 03:49:42] 2025-10-13 07:49:41,944 | INFO     | traces error code: 0
[2025-10-13 03:49:42] 2025-10-13 07:49:41,944 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 03:49:42] 2025-10-13 07:49:42,082 [wrapper] ==== pilot stdout END ====
[2025-10-13 03:49:42] 2025-10-13 07:49:42,084 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 03:49:42] 2025-10-13 07:49:42,087 [wrapper] pilotpid: 9598
[2025-10-13 03:49:42] 2025-10-13 07:49:42,089 [wrapper] Pilot exit status: 0
[2025-10-13 03:49:42] 2025-10-13 07:49:42,098 [wrapper] pandaids: 6840969209
[2025-10-13 03:49:42] 2025-10-13 07:49:42,127 [wrapper] cleanup supervisor_pilot 30807 9599
[2025-10-13 03:49:42] 2025-10-13 07:49:42,130 [wrapper] Test setup, not cleaning
[2025-10-13 03:49:42] 2025-10-13 07:49:42,132 [wrapper] apfmon messages muted
[2025-10-13 03:49:42] 2025-10-13 07:49:42,135 [wrapper] ==== wrapper stdout END ====
[2025-10-13 03:49:42] 2025-10-13 07:49:42,137 [wrapper] ==== wrapper stderr END ====
[2025-10-13 03:49:42]  *** Error codes and diagnostics ***
[2025-10-13 03:49:42]     "exeErrorCode": 0,
[2025-10-13 03:49:42]     "exeErrorDiag": "",
[2025-10-13 03:49:42]     "pilotErrorCode": 0,
[2025-10-13 03:49:42]     "pilotErrorDiag": "",
[2025-10-13 03:49:42]  *** Listing of results directory ***
[2025-10-13 03:49:42] total 418268
[2025-10-13 03:49:42] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 19:11 pilot3.tar.gz
[2025-10-13 03:49:42] -rwx------ 1 boincer umatlas     36292 Oct 12 19:27 runpilot2-wrapper.sh
[2025-10-13 03:49:42] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 19:27 queuedata.json
[2025-10-13 03:49:42] -rw-r--r-- 1 boincer umatlas       100 Oct 13 00:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 03:49:42] -rwxr-xr-x 1 boincer umatlas      7986 Oct 13 00:47 run_atlas
[2025-10-13 03:49:42] -rw-r--r-- 1 boincer umatlas       105 Oct 13 00:47 job.xml
[2025-10-13 03:49:42] -rw-r--r-- 2 boincer umatlas 222656356 Oct 13 00:47 EVNT.46676267._004657.pool.root.1
[2025-10-13 03:49:42] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 00:47 start_atlas.sh
[2025-10-13 03:49:42] drwxrwx--x 2 boincer umatlas      4096 Oct 13 00:47 shared
[2025-10-13 03:49:42] -rw-r--r-- 2 boincer umatlas    569678 Oct 13 00:47 input.tar.gz
[2025-10-13 03:49:42] -rw-r--r-- 1 boincer umatlas         0 Oct 13 00:47 boinc_lockfile
[2025-10-13 03:49:42] -rw-r--r-- 1 boincer umatlas      2550 Oct 13 00:47 pandaJob.out
[2025-10-13 03:49:42] -rw------- 1 boincer umatlas    974365 Oct 13 00:47 agis_schedconf.cvmfs.json
[2025-10-13 03:49:42] drwx------ 5 boincer umatlas      4096 Oct 13 00:47 pilot3
[2025-10-13 03:49:42] -rw-r--r-- 1 boincer umatlas      5952 Oct 13 03:36 init_data.xml
[2025-10-13 03:49:42] -rw------- 1 boincer umatlas 197854723 Oct 13 03:48 HITS.46676269._092210.pool.root.1
[2025-10-13 03:49:42] -rw-r--r-- 1 boincer umatlas       530 Oct 13 03:48 boinc_task_state.xml
[2025-10-13 03:49:42] -rw------- 1 boincer umatlas      1052 Oct 13 03:48 memory_monitor_summary.json
[2025-10-13 03:49:42] -rw------- 1 boincer umatlas   1560580 Oct 13 03:48 agis_ddmendpoints.agis.ALL.json
[2025-10-13 03:49:42] -rw------- 1 boincer umatlas    423165 Oct 13 03:48 log.46676269._092210.job.log.tgz.1
[2025-10-13 03:49:42] -rw------- 1 boincer umatlas      7854 Oct 13 03:48 heartbeat.json
[2025-10-13 03:49:42] -rw------- 1 boincer umatlas        95 Oct 13 03:49 pilot_heartbeat.json
[2025-10-13 03:49:42] -rw-r--r-- 1 boincer umatlas      8192 Oct 13 03:49 boinc_mmap_file
[2025-10-13 03:49:42] -rw-r--r-- 1 boincer umatlas        28 Oct 13 03:49 wrapper_checkpoint.txt
[2025-10-13 03:49:42] -rw------- 1 boincer umatlas      4820 Oct 13 03:49 pilotlog.txt
[2025-10-13 03:49:42] -rw------- 1 boincer umatlas   1526522 Oct 13 03:49 log.46676269._092210.job.log.1
[2025-10-13 03:49:42] -rw------- 1 boincer umatlas       357 Oct 13 03:49 output.list
[2025-10-13 03:49:42] -rw-r--r-- 1 boincer umatlas       620 Oct 13 03:49 runtime_log
[2025-10-13 03:49:42] -rw------- 1 boincer umatlas   1966080 Oct 13 03:49 result.tar.gz
[2025-10-13 03:49:42] -rw-r--r-- 1 boincer umatlas      8704 Oct 13 03:49 runtime_log.err
[2025-10-13 03:49:42] -rw------- 1 boincer umatlas       661 Oct 13 03:49 IT3LDmqeKS8n9Rq4apOajLDm4fhM0noT9bVof3QYDm5GVMDmhSi8Fm.diag
[2025-10-13 03:49:42] -rw-r--r-- 1 boincer umatlas     20867 Oct 13 03:49 stderr.txt
[2025-10-13 03:49:42] HITS file was successfully produced:
[2025-10-13 03:49:42] -rw------- 1 boincer umatlas 197854723 Oct 13 03:48 shared/HITS.pool.root.1
[2025-10-13 03:49:42]  *** Contents of shared directory: ***
[2025-10-13 03:49:42] total 413160
[2025-10-13 03:49:42] -rw-r--r-- 2 boincer umatlas 222656356 Oct 13 00:47 ATLAS.root_0
[2025-10-13 03:49:42] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 00:47 start_atlas.sh
[2025-10-13 03:49:42] -rw-r--r-- 2 boincer umatlas    569678 Oct 13 00:47 input.tar.gz
[2025-10-13 03:49:42] -rw------- 1 boincer umatlas 197854723 Oct 13 03:48 HITS.pool.root.1
[2025-10-13 03:49:42] -rw------- 1 boincer umatlas   1966080 Oct 13 03:49 result.tar.gz
03:49:43 (5914): run_atlas exited; CPU time 82014.199750
03:49:43 (5914): called boinc_finish(0)

</stderr_txt>
]]>

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