Stderr output

<core_client_version>7.16.20</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-13 21:29:07 (20728): vboxwrapper version 26210
2025-10-13 21:29:07 (20728): BOINC client version: 7.16.20
2025-10-13 21:29:08 (20728): Detected: VirtualBox VboxManage Interface (Version: 6.1.40)
2025-10-13 21:29:08 (20728): Successfully copied 'init_data.xml' to the shared directory.
2025-10-13 21:29:08 (20728): Create VM. (boinc_dd9b804b08d97d9a, slot#1)
2025-10-13 21:29:09 (20728): Setting Memory Size for VM. (4600MB)
2025-10-13 21:29:09 (20728): Setting CPU Count for VM. (6)
2025-10-13 21:29:09 (20728): Setting Chipset Options for VM.
2025-10-13 21:29:10 (20728): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-13 21:29:10 (20728): Setting Boot Options for VM.
2025-10-13 21:29:11 (20728): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-13 21:29:11 (20728): Enabling VM Network Access.
2025-10-13 21:29:11 (20728): Disabling USB Support for VM.
2025-10-13 21:29:11 (20728): Disabling COM Port Support for VM.
2025-10-13 21:29:12 (20728): Disabling LPT Port Support for VM.
2025-10-13 21:29:12 (20728): Disabling Audio Support for VM.
2025-10-13 21:29:12 (20728): Disabling Clipboard Support for VM.
2025-10-13 21:29:12 (20728): Disabling Drag and Drop Support for VM.
2025-10-13 21:29:13 (20728): Adding storage controller(s) to VM.
2025-10-13 21:29:13 (20728): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-13 21:29:13 (20728): Adding VirtualBox Guest Additions to VM.
2025-10-13 21:29:14 (20728): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-13 21:29:14 (20728): forwarding host port 52055 to guest port 80
2025-10-13 21:29:14 (20728): Enabling remote desktop for VM.
2025-10-13 21:29:14 (20728): Required extension pack not installed, remote desktop not enabled.
2025-10-13 21:29:14 (20728): Enabling shared directory for VM.
2025-10-13 21:29:15 (20728): Starting VM using VBoxManage interface. (boinc_dd9b804b08d97d9a, slot#1)
2025-10-13 21:29:22 (20728): Successfully started VM. (PID = '592')
2025-10-13 21:29:22 (20728): Reporting VM Process ID to BOINC.
2025-10-13 21:29:22 (20728): Guest Log: BIOS: VirtualBox 6.1.40
2025-10-13 21:29:22 (20728): Guest Log: CPUID EDX: 0x178bfbff
2025-10-13 21:29:22 (20728): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-10-13 21:29:22 (20728): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-13 21:29:22 (20728): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-13 21:29:22 (20728): Detected: Web Application Enabled (http://localhost:52055)
2025-10-13 21:29:22 (20728): Preference change detected
2025-10-13 21:29:22 (20728): Setting CPU throttle for VM. (85%)
2025-10-13 21:29:22 (20728): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 180 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-13 21:29:24 (20728): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-13 21:29:24 (20728): Guest Log: BIOS: Booting from Hard Disk...
2025-10-13 21:29:28 (20728): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-13 21:29:28 (20728): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-13 21:29:28 (20728): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-13 21:29:28 (20728): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-13 21:29:28 (20728): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-13 21:29:28 (20728): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-13 21:29:28 (20728): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-13 21:29:28 (20728): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-13 21:29:28 (20728): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-13 21:29:28 (20728): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-13 21:29:28 (20728): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-13 21:29:28 (20728): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-13 21:29:28 (20728): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-13 21:29:28 (20728): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-13 21:29:28 (20728): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-13 21:29:28 (20728): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-13 21:29:28 (20728): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-13 21:29:28 (20728): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-13 21:29:28 (20728): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-13 21:29:28 (20728): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-13 21:29:28 (20728): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-13 21:29:28 (20728): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-13 21:29:28 (20728): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-13 21:29:28 (20728): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-13 21:29:28 (20728): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-13 21:29:28 (20728): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-13 21:29:28 (20728): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-13 21:29:28 (20728): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-13 21:29:28 (20728): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-13 21:29:28 (20728): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-13 21:29:28 (20728): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-13 21:29:28 (20728): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-13 21:29:36 (20728): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-13 21:29:36 (20728): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2025-10-13 21:29:48 (20728): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-13 21:29:48 (20728): Guest Log: 00:00:00.000344 main     Log opened 2025-10-13T21:29:46.590496000Z
2025-10-13 21:29:48 (20728): Guest Log: 00:00:00.000490 main     OS Product: Linux
2025-10-13 21:29:48 (20728): Guest Log: 00:00:00.000553 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-13 21:29:48 (20728): Guest Log: 00:00:00.000605 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-13 21:29:48 (20728): Guest Log: 00:00:00.000658 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-13 21:29:48 (20728): Guest Log: 00:00:00.000660 main     Process ID: 1340
2025-10-13 21:29:48 (20728): Guest Log: 00:00:00.000661 main     Package type: LINUX_64BITS_GENERIC
2025-10-13 21:29:48 (20728): Guest Log: 00:00:00.002626 main     5.2.32 r132073 started. Verbose level = 0
2025-10-13 21:29:48 (20728): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-13 21:29:48 (20728): Guest Log: [INFO] Mounting shared directory
2025-10-13 21:29:48 (20728): Guest Log: [INFO] Checking for init_data.xml
2025-10-13 21:29:58 (20728): Guest Log: 00:00:10.006256 timesync vgsvcTimeSyncWorker: Radical guest time change: -32 389 328 032 000ns (GuestNow=1 760 358 597 267 164 000 ns GuestLast=1 760 390 986 595 196 000 ns fSetTimeLastLoop=true )
2025-10-13 21:29:58 (20728): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-13 21:29:58 (20728): Guest Log: [INFO] Detected branch: prod
2025-10-13 21:29:59 (20728): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-13 21:29:59 (20728): Guest Log: Copying input files
2025-10-13 21:30:01 (20728): Guest Log: Copied input files into RunAtlas.
2025-10-13 21:30:01 (20728): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-10-13 21:30:01 (20728): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-10-13 21:30:01 (20728): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-10-13 21:30:01 (20728): Guest Log: Further information can be found at the LHC@home message board.
2025-10-13 21:30:15 (20728): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-13 21:30:16 (20728): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-13 21:30:16 (20728): Guest Log: 2.6.3.0 1619 0 32164 151661 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1ihep-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-10-13 21:30:17 (20728): Guest Log: copied the webapp to /var/www
2025-10-13 21:30:17 (20728): Guest Log: ATHENA_PROC_NUMBER=6
2025-10-13 21:30:17 (20728): Guest Log: ATHENA_CORE_NUMBER=6
2025-10-13 21:30:18 (20728): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-13 21:30:18 (20728): Guest Log:  *** Starting ATLAS job. (PandaID=6840970406 taskID=46676269) ***
2025-10-13 23:09:28 (20728): Status Report: Elapsed Time: '6000.000000'
2025-10-13 23:09:28 (20728): Status Report: CPU Time: '21862.500000'
2025-10-14 00:49:35 (20728): Status Report: Elapsed Time: '12000.000000'
2025-10-14 00:49:35 (20728): Status Report: CPU Time: '48947.000000'
2025-10-14 01:03:09 (20728): Preference change detected
2025-10-14 01:03:09 (20728): Setting CPU throttle for VM. (85%)
2025-10-14 01:03:10 (20728): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 180 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-14 02:29:42 (20728): Status Report: Elapsed Time: '18000.000000'
2025-10-14 02:29:42 (20728): Status Report: CPU Time: '76005.109375'
2025-10-14 04:09:49 (20728): Status Report: Elapsed Time: '24000.000000'
2025-10-14 04:09:49 (20728): Status Report: CPU Time: '103068.187500'
2025-10-14 05:35:28 (20728): Guest Log:  *** Job finished ***
2025-10-14 05:35:28 (20728): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-14 05:35:28 (20728): Guest Log: 2025-10-13 20:34:44,999 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
2025-10-14 05:35:28 (20728): Guest Log: 2025-10-13 20:34:49,138 | INFO     | [data] queue_monitor thread has finished
2025-10-14 05:35:28 (20728): Guest Log: 2025-10-13 20:35:21,000 | INFO     | [monitor] cgroup control has ended
2025-10-14 05:35:28 (20728): Guest Log: 2025-10-13 20:35:21,649 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140706670716736)>', '<ExcThread(monitor, started 140705276098304)>']
2025-10-14 05:35:28 (20728): Guest Log: 2025-10-13 20:35:21,782 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-14 05:35:28 (20728): Guest Log: 2025-10-13 20:35:21,782 | INFO     | [monitor] control thread has ended
2025-10-14 05:35:28 (20728): Guest Log: 2025-10-13 20:35:26,658 | INFO     | all workflow threads have been joined
2025-10-14 05:35:28 (20728): Guest Log: 2025-10-13 20:35:26,658 | INFO     | end of generic workflow (traces error code: 0)
2025-10-14 05:35:28 (20728): Guest Log: 2025-10-13 20:35:26,659 | INFO     | traces error code: 0
2025-10-14 05:35:28 (20728): Guest Log: 2025-10-13 20:35:26,659 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-14 05:35:28 (20728): Guest Log: 2025-10-13 20:35:26,785 [wrapper] ==== pilot stdout END ====
2025-10-14 05:35:28 (20728): Guest Log: 2025-10-13 20:35:26,792 [wrapper] ==== wrapper stdout RESUME ====
2025-10-14 05:35:28 (20728): Guest Log: 2025-10-13 20:35:26,798 [wrapper] pilotpid: 6045
2025-10-14 05:35:28 (20728): Guest Log: 2025-10-13 20:35:26,805 [wrapper] Pilot exit status: 0
2025-10-14 05:35:28 (20728): Guest Log: 2025-10-13 20:35:27,116 [wrapper] pandaids: 6840970406
2025-10-14 05:35:28 (20728): Guest Log: 2025-10-13 20:35:27,190 [wrapper] cleanup supervisor_pilot 29511 6046
2025-10-14 05:35:28 (20728): Guest Log: 2025-10-13 20:35:27,199 [wrapper] Test setup, not cleaning
2025-10-14 05:35:28 (20728): Guest Log: 2025-10-13 20:35:27,218 [wrapper] apfmon messages muted
2025-10-14 05:35:28 (20728): Guest Log: 2025-10-13 20:35:27,225 [wrapper] ==== wrapper stdout END ====
2025-10-14 05:35:28 (20728): Guest Log: 2025-10-13 20:35:27,232 [wrapper] ==== wrapper stderr END ====
2025-10-14 05:35:28 (20728): Guest Log:  *** Error codes and diagnostics ***
2025-10-14 05:35:28 (20728): Guest Log:     "exeErrorCode": 0,
2025-10-14 05:35:28 (20728): Guest Log:     "exeErrorDiag": "",
2025-10-14 05:35:28 (20728): Guest Log:     "pilotErrorCode": 0,
2025-10-14 05:35:28 (20728): Guest Log:     "pilotErrorDiag": "",
2025-10-14 05:35:28 (20728): Guest Log:  *** Listing of results directory ***
2025-10-14 05:35:28 (20728): Guest Log: total 199536
2025-10-14 05:35:28 (20728): Guest Log: -rw-r--r--. 1 atlas atlas    557409 Oct 12 23:51 pilot3.tar.gz
2025-10-14 05:35:28 (20728): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct 12 23:57 queuedata.json
2025-10-14 05:35:28 (20728): Guest Log: -rwx------. 1 atlas atlas     36292 Oct 12 23:59 runpilot2-wrapper.sh
2025-10-14 05:35:28 (20728): Guest Log: -rwxr-xr-x. 1 atlas atlas      5945 Oct 13 12:30 init_data.xml
2025-10-14 05:35:28 (20728): Guest Log: -rwxr-xr-x. 1 atlas atlas    569682 Oct 13 12:30 input.tar.gz
2025-10-14 05:35:28 (20728): Guest Log: -rwxr-xr-x. 1 atlas atlas     15120 Oct 13 12:30 start_atlas.sh
2025-10-14 05:35:28 (20728): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct 13 12:30 EVNT.46676267._004679.pool.root.1 -> /data/./ATLAS.root_0
2025-10-14 05:35:28 (20728): Guest Log: -rw-r--r--. 1 atlas atlas      2547 Oct 13 12:30 pandaJob.out
2025-10-14 05:35:28 (20728): Guest Log: -rw-------. 1 atlas atlas    972497 Oct 13 12:32 agis_schedconf.cvmfs.json
2025-10-14 05:35:28 (20728): Guest Log: drwx------. 5 atlas atlas      4096 Oct 13 12:32 pilot3
2025-10-14 05:35:28 (20728): Guest Log: -rw-------. 1 atlas atlas 192073663 Oct 13 20:33 HITS.46676269._092743.pool.root.1
2025-10-14 05:35:28 (20728): Guest Log: -rw-------. 1 atlas atlas      1032 Oct 13 20:34 memory_monitor_summary.json
2025-10-14 05:35:28 (20728): Guest Log: -rw-------. 1 atlas atlas   1560580 Oct 13 20:34 agis_ddmendpoints.agis.ALL.json
2025-10-14 05:35:28 (20728): Guest Log: -rw-------. 1 atlas atlas    600768 Oct 13 20:34 log.46676269._092743.job.log.tgz.1
2025-10-14 05:35:28 (20728): Guest Log: -rw-------. 1 atlas atlas        95 Oct 13 20:34 pilot_heartbeat.json
2025-10-14 05:35:28 (20728): Guest Log: -rw-------. 1 atlas atlas      7826 Oct 13 20:34 heartbeat.json
2025-10-14 05:35:28 (20728): Guest Log: -rw-------. 1 atlas atlas      4798 Oct 13 20:35 pilotlog.txt
2025-10-14 05:35:28 (20728): Guest Log: -rw-------. 1 atlas atlas   3613481 Oct 13 20:35 log.46676269._092743.job.log.1
2025-10-14 05:35:28 (20728): Guest Log: -rw-------. 1 atlas atlas       357 Oct 13 20:35 output.list
2025-10-14 05:35:28 (20728): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct 13 20:35 runtime_log
2025-10-14 05:35:28 (20728): Guest Log: -rw-------. 1 atlas atlas   4229120 Oct 13 20:35 result.tar.gz
2025-10-14 05:35:28 (20728): Guest Log: -rw-r--r--. 1 atlas atlas      8679 Oct 13 20:35 runtime_log.err
2025-10-14 05:35:28 (20728): Guest Log: -rw-------. 1 atlas atlas       673 Oct 13 20:35 RaWKDm88KS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmV8lNDmYtmoAn.diag
2025-10-14 05:35:28 (20728): Guest Log: Looking for outputfile HITS.46676269._092743.pool.root.1
2025-10-14 05:35:28 (20728): Guest Log: HITS file was successfully produced
2025-10-14 05:35:28 (20728): Guest Log: -rw-------. 1 atlas atlas 192073663 Oct 13 20:33 /home/atlas/RunAtlas/HITS.46676269._092743.pool.root.1
2025-10-14 05:35:29 (20728): Guest Log: Successfully finished the ATLAS job!
2025-10-14 05:35:29 (20728): Guest Log: Copying the results back to the shared directory!
2025-10-14 05:35:30 (20728): Guest Log:  *** Contents of shared directory: ***
2025-10-14 05:35:30 (20728): Guest Log: total 406276
2025-10-14 05:35:30 (20728): Guest Log: -rwxrwxrwx. 1 root root 219120669 Oct 13 12:29 ATLAS.root_0
2025-10-14 05:35:30 (20728): Guest Log: -rwxrwxrwx. 1 root root 192073663 Oct 13 20:35 HITS.pool.root.1
2025-10-14 05:35:30 (20728): Guest Log: -rwxrwxrwx. 1 root root      5945 Oct 13 12:29 init_data.xml
2025-10-14 05:35:30 (20728): Guest Log: -rwxrwxrwx. 1 root root    569682 Oct 13 04:29 input.tar.gz
2025-10-14 05:35:30 (20728): Guest Log: -rwxrwxrwx. 1 root root   4229120 Oct 13 20:35 result.tar.gz
2025-10-14 05:35:30 (20728): Guest Log: -rwxrwxrwx. 1 root root     15120 Oct 13 04:29 start_atlas.sh
2025-10-14 05:35:30 (20728): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-14 05:35:30 (20728): VM Completion File Detected.
2025-10-14 05:35:30 (20728): Powering off VM.
2025-10-14 05:35:31 (20728): Successfully stopped VM.
2025-10-14 05:35:31 (20728): Deregistering VM. (boinc_dd9b804b08d97d9a, slot#1)
2025-10-14 05:35:31 (20728): Removing network bandwidth throttle group from VM.
2025-10-14 05:35:31 (20728): Removing VM from VirtualBox.
2025-10-14 05:35:37 (20728): called boinc_finish(0)

</stderr_txt>
]]>

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