Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
00:25:24 (30970): wrapper (7.7.26015): starting
00:25:24 (30970): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 00:25:24] Arguments: --nthreads 8
[2025-10-13 00:25:24] Threads: 8
[2025-10-13 00:25:24] Checking for CVMFS
[2025-10-13 00:25:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 00:25:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 00:25:25] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 00:25:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 00:25:25] 2.11.2.0 2892 206806 83688 151649 0 57 13371653 20275200 1 130560 1 74792773 99.977 10739850 9973 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 00:25:25] CVMFS is ok
[2025-10-13 00:25:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 00:25:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 00:25:25] Further information can be found at the LHC@home message board.
[2025-10-13 00:25:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 00:25:25] Checking for apptainer binary...
[2025-10-13 00:25:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 00:25:25] Running /usr/bin/apptainer --version
[2025-10-13 00:25:25] apptainer version 1.3.2-1.el7
[2025-10-13 00:25:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 00:25:26] c-204-27.aglt2.org
[2025-10-13 00:25:26] apptainer works
[2025-10-13 00:25:26] Set ATHENA_PROC_NUMBER=8
[2025-10-13 00:25:26] Set ATHENA_CORE_NUMBER=8
[2025-10-13 00:25:26] Starting ATLAS job with PandaID=6840834662
[2025-10-13 00:25:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 02:31:03]  *** The last 200 lines of the pilot log: ***
[2025-10-13 02:31:03] 2025-10-13 06:30:20,934 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 02:31:03] 2025-10-13 06:30:21,541 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-13 02:31:03] 2025-10-13 06:30:21,544 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1729.125
[2025-10-13 02:31:03] 2025-10-13 06:30:21,546 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6840834662/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 02:31:03] 2025-10-13 06:30:21,547 | INFO     | extracted standard info from prmon json
[2025-10-13 02:31:03] 2025-10-13 06:30:21,548 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 02:31:03] 2025-10-13 06:30:21,548 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 02:31:03] 2025-10-13 06:30:21,548 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 02:31:03] 2025-10-13 06:30:21,548 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 02:31:03] 2025-10-13 06:30:21,551 | INFO     | fitting pss+swap vs Time
[2025-10-13 02:31:03] 2025-10-13 06:30:21,552 | INFO     | sum of square deviations: 563026370.5
[2025-10-13 02:31:03] 2025-10-13 06:30:21,552 | INFO     | sum of deviations: -5068924380.999983
[2025-10-13 02:31:03] 2025-10-13 06:30:21,553 | INFO     | mean x: 1760333265.5
[2025-10-13 02:31:03] 2025-10-13 06:30:21,553 | INFO     | mean y: 2559523.295081967
[2025-10-13 02:31:03] 2025-10-13 06:30:21,553 | INFO     | -- intersect: 15850833557.51861
[2025-10-13 02:31:03] 2025-10-13 06:30:21,553 | INFO     | intersect: 15850833557.51861
[2025-10-13 02:31:03] 2025-10-13 06:30:21,553 | INFO     | chi2: 1.628999256911506
[2025-10-13 02:31:03] 2025-10-13 06:30:21,554 | INFO     | sum of square deviations: 496597218.0
[2025-10-13 02:31:03] 2025-10-13 06:30:21,554 | INFO     | sum of deviations: -4160501217.999996
[2025-10-13 02:31:03] 2025-10-13 06:30:21,554 | INFO     | mean x: 1760333113.0
[2025-10-13 02:31:03] 2025-10-13 06:30:21,555 | INFO     | mean y: 2561609.9145299145
[2025-10-13 02:31:03] 2025-10-13 06:30:21,555 | INFO     | -- intersect: 14750666905.829063
[2025-10-13 02:31:03] 2025-10-13 06:30:21,555 | INFO     | intersect: 14750666905.829063
[2025-10-13 02:31:03] 2025-10-13 06:30:21,555 | INFO     | chi2: 1.6303889832017289
[2025-10-13 02:31:03] 2025-10-13 06:30:21,555 | INFO     | current chi2=1.6303889832017289 (change=-0.08531165894193116 %)
[2025-10-13 02:31:03] 2025-10-13 06:30:21,555 | INFO     | right removable region: 116
[2025-10-13 02:31:03] 2025-10-13 06:30:21,556 | INFO     | sum of square deviations: 496597218.0
[2025-10-13 02:31:03] 2025-10-13 06:30:21,556 | INFO     | sum of deviations: -23628828057.0
[2025-10-13 02:31:03] 2025-10-13 06:30:21,556 | INFO     | mean x: 1760333418.0
[2025-10-13 02:31:03] 2025-10-13 06:30:21,557 | INFO     | mean y: 2601347.547008547
[2025-10-13 02:31:03] 2025-10-13 06:30:21,557 | INFO     | -- intersect: 83761861668.07726
[2025-10-13 02:31:03] 2025-10-13 06:30:21,557 | INFO     | intersect: 83761861668.07726
[2025-10-13 02:31:03] 2025-10-13 06:30:21,557 | INFO     | chi2: 0.1422058581048613
[2025-10-13 02:31:03] 2025-10-13 06:30:21,557 | INFO     | current chi2=0.1422058581048613 (change=91.27035463635042 %)
[2025-10-13 02:31:03] 2025-10-13 06:30:21,557 | INFO     | sum of square deviations: 435610028.0
[2025-10-13 02:31:03] 2025-10-13 06:30:21,558 | INFO     | sum of deviations: -23696839061.5
[2025-10-13 02:31:03] 2025-10-13 06:30:21,558 | INFO     | mean x: 1760333570.5
[2025-10-13 02:31:03] 2025-10-13 06:30:21,558 | INFO     | mean y: 2601376.723214286
[2025-10-13 02:31:03] 2025-10-13 06:30:21,558 | INFO     | -- intersect: 95763347533.59122
[2025-10-13 02:31:03] 2025-10-13 06:30:21,558 | INFO     | intersect: 95763347533.59122
[2025-10-13 02:31:03] 2025-10-13 06:30:21,559 | INFO     | chi2: 0.10706658149259429
[2025-10-13 02:31:03] 2025-10-13 06:30:21,559 | INFO     | current chi2=0.10706658149259429 (change=24.71014702246347 %)
[2025-10-13 02:31:03] 2025-10-13 06:30:21,559 | INFO     | left removable region: 20
[2025-10-13 02:31:03] 2025-10-13 06:30:21,559 | INFO     | sum of square deviations: 274312120.0
[2025-10-13 02:31:03] 2025-10-13 06:30:21,560 | INFO     | sum of deviations: -16519366171.499998
[2025-10-13 02:31:03] 2025-10-13 06:30:21,560 | INFO     | mean x: 1760333692.5
[2025-10-13 02:31:03] 2025-10-13 06:30:21,560 | INFO     | mean y: 2589286.7604166665
[2025-10-13 02:31:03] 2025-10-13 06:30:21,560 | INFO     | -- intersect: 106011747214.00105
[2025-10-13 02:31:03] 2025-10-13 06:30:21,560 | INFO     | intersect: 106011747214.00105
[2025-10-13 02:31:03] 2025-10-13 06:30:21,560 | INFO     | chi2: 0.09814682462235971
[2025-10-13 02:31:03] 2025-10-13 06:30:21,560 | INFO     | -- intersect: 106011747214.00105
[2025-10-13 02:31:03] 2025-10-13 06:30:21,561 | INFO     | current memory leak: -60.22 B/s (using 96 data points, chi2=0.10)
[2025-10-13 02:31:03] 2025-10-13 06:30:21,561 | INFO     | could have reported an average CPU frequency of 1943 MHz (8 samples)
[2025-10-13 02:31:03] 2025-10-13 06:30:21,561 | INFO     | ..............................
[2025-10-13 02:31:03] 2025-10-13 06:30:21,561 | INFO     | . Timing measurements:
[2025-10-13 02:31:03] 2025-10-13 06:30:21,561 | INFO     | . get job = 0 s
[2025-10-13 02:31:03] 2025-10-13 06:30:21,561 | INFO     | . initial setup = 2 s
[2025-10-13 02:31:03] 2025-10-13 06:30:21,562 | INFO     | . payload setup = 8 s
[2025-10-13 02:31:03] 2025-10-13 06:30:21,562 | INFO     | . stage-in = 0 s
[2025-10-13 02:31:03] 2025-10-13 06:30:21,562 | INFO     | . payload execution = 7438 s
[2025-10-13 02:31:03] 2025-10-13 06:30:21,562 | INFO     | . stage-out = 0 s
[2025-10-13 02:31:03] 2025-10-13 06:30:21,562 | INFO     | . log creation = 0 s
[2025-10-13 02:31:03] 2025-10-13 06:30:21,562 | INFO     | ..............................
[2025-10-13 02:31:03] 2025-10-13 06:30:21,653 | INFO     | 
[2025-10-13 02:31:03] 2025-10-13 06:30:21,653 | INFO     | job summary report
[2025-10-13 02:31:03] 2025-10-13 06:30:21,653 | INFO     | --------------------------------------------------
[2025-10-13 02:31:03] 2025-10-13 06:30:21,653 | INFO     | PanDA job id: 6840834662
[2025-10-13 02:31:03] 2025-10-13 06:30:21,654 | INFO     | task id: 46676269
[2025-10-13 02:31:03] 2025-10-13 06:30:21,654 | INFO     | errors: (none)
[2025-10-13 02:31:03] 2025-10-13 06:30:21,654 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 02:31:03] 2025-10-13 06:30:21,654 | INFO     | pilot state: finished 
[2025-10-13 02:31:03] 2025-10-13 06:30:21,654 | INFO     | transexitcode: 0
[2025-10-13 02:31:03] 2025-10-13 06:30:21,654 | INFO     | exeerrorcode: 0
[2025-10-13 02:31:03] 2025-10-13 06:30:21,654 | INFO     | exeerrordiag: 
[2025-10-13 02:31:03] 2025-10-13 06:30:21,654 | INFO     | exitcode: 0
[2025-10-13 02:31:03] 2025-10-13 06:30:21,655 | INFO     | exitmsg: OK
[2025-10-13 02:31:03] 2025-10-13 06:30:21,655 | INFO     | cpuconsumptiontime: 54849 s
[2025-10-13 02:31:03] 2025-10-13 06:30:21,655 | INFO     | nevents: 400
[2025-10-13 02:31:03] 2025-10-13 06:30:21,655 | INFO     | neventsw: 0
[2025-10-13 02:31:03] 2025-10-13 06:30:21,655 | INFO     | pid: 8855
[2025-10-13 02:31:03] 2025-10-13 06:30:21,655 | INFO     | pgrp: 8855
[2025-10-13 02:31:03] 2025-10-13 06:30:21,655 | INFO     | corecount: 8
[2025-10-13 02:31:03] 2025-10-13 06:30:21,655 | INFO     | event service: False
[2025-10-13 02:31:03] 2025-10-13 06:30:21,655 | INFO     | sizes: {0: 2347979, 1: 2348835, 7: 2349097, 12: 2349125, 7450: 2376514, 7451: 2385512, 7455: 2385696, 7461: 2385890}
[2025-10-13 02:31:03] 2025-10-13 06:30:21,656 | INFO     | --------------------------------------------------
[2025-10-13 02:31:03] 2025-10-13 06:30:21,656 | INFO     | 
[2025-10-13 02:31:03] 2025-10-13 06:30:21,656 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 02:31:03] 2025-10-13 06:30:21,682 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 02:31:03] 2025-10-13 06:30:21,683 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 02:31:03] 2025-10-13 06:30:21,683 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 02:31:03] 2025-10-13 06:30:21,683 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 02:31:03] 2025-10-13 06:30:21,683 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 02:31:03] 2025-10-13 06:30:21,683 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 02:31:03] 2025-10-13 06:30:21,684 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 02:31:03] 2025-10-13 06:30:21,684 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 02:31:03] 2025-10-13 06:30:21,684 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 02:31:03] 2025-10-13 06:30:21,684 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 02:31:03] 2025-10-13 06:30:21,684 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 02:31:03] 2025-10-13 06:30:21,685 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 02:31:03] 2025-10-13 06:30:21,685 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 02:31:03] 2025-10-13 06:30:21,685 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 02:31:03] 2025-10-13 06:30:21,685 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 02:31:03] 2025-10-13 06:30:21,685 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 02:31:03] 2025-10-13 06:30:21,686 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 02:31:03] 2025-10-13 06:30:21,686 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 02:31:03] 2025-10-13 06:30:21,686 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 02:31:03] 2025-10-13 06:30:21,686 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 02:31:03] 2025-10-13 06:30:21,686 | INFO     | job 6840834662 has completed (purged errors)
[2025-10-13 02:31:03] 2025-10-13 06:30:21,687 | INFO     | overall cleanup function is called
[2025-10-13 02:31:03] 2025-10-13 06:30:22,695 | INFO     | --- collectZombieJob: --- 10, [8855]
[2025-10-13 02:31:03] 2025-10-13 06:30:22,695 | INFO     | zombie collector waiting for pid 8855
[2025-10-13 02:31:03] 2025-10-13 06:30:22,695 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 02:31:03] 2025-10-13 06:30:22,695 | INFO     | collected zombie processes
[2025-10-13 02:31:03] 2025-10-13 06:30:22,696 | INFO     | will attempt to kill all subprocesses of pid=8855
[2025-10-13 02:31:03] 2025-10-13 06:30:22,786 | INFO     | process IDs to be killed: [8855] (in reverse order)
[2025-10-13 02:31:03] 2025-10-13 06:30:22,845 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 02:31:03] 2025-10-13 06:30:22,845 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 02:31:03] 2025-10-13 06:30:22,849 | INFO     | did not find any defunct processes belonging to 8855
[2025-10-13 02:31:03] 2025-10-13 06:30:22,852 | INFO     | did not find any defunct processes belonging to 8855
[2025-10-13 02:31:03] 2025-10-13 06:30:22,852 | INFO     | ready for new job
[2025-10-13 02:31:03] 2025-10-13 06:30:22,853 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 02:31:03] 2025-10-13 06:30:22,855 | INFO     | ***************************************
[2025-10-13 02:31:03] 2025-10-13 06:30:22,855 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 02:31:03] 2025-10-13 06:30:22,855 | INFO     | ***************************************
[2025-10-13 02:31:03] 2025-10-13 06:30:22,855 | INFO     | 
[2025-10-13 02:31:03] 2025-10-13 06:30:22,856 | INFO     | architecture information:
[2025-10-13 02:31:03] 2025-10-13 06:30:22,856 | INFO     | executing command: cat /etc/os-release
[2025-10-13 02:31:03] 2025-10-13 06:30:22,873 | INFO     | cat /etc/os-release:
[2025-10-13 02:31:03] NAME="CentOS Linux"
[2025-10-13 02:31:03] VERSION="7 (Core)"
[2025-10-13 02:31:03] ID="centos"
[2025-10-13 02:31:03] ID_LIKE="rhel fedora"
[2025-10-13 02:31:03] VERSION_ID="7"
[2025-10-13 02:31:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 02:31:03] ANSI_COLOR="0;31"
[2025-10-13 02:31:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 02:31:03] HOME_URL="https://www.centos.org/"
[2025-10-13 02:31:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 02:31:03] 
[2025-10-13 02:31:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 02:31:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 02:31:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 02:31:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 02:31:03] 
[2025-10-13 02:31:03] 2025-10-13 06:30:22,874 | INFO     | ***************************************
[2025-10-13 02:31:03] 2025-10-13 06:30:23,376 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 02:31:03] 2025-10-13 06:30:23,394 | INFO     | sufficient remaining disk space (18559795200 B)
[2025-10-13 02:31:03] 2025-10-13 06:30:23,395 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 02:31:03] 2025-10-13 06:30:23,395 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 02:31:03] 2025-10-13 06:30:23,395 | INFO     | update_server=False
[2025-10-13 02:31:03] 2025-10-13 06:30:23,395 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 02:31:03] 2025-10-13 06:30:23,396 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 02:31:03] 2025-10-13 06:30:23,396 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 02:31:03] 2025-10-13 06:30:23,437 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 02:31:03] 2025-10-13 06:30:23,437 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 02:31:03] 2025-10-13 06:30:23,438 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 02:31:03] 2025-10-13 06:30:23,438 | INFO     | will abort loop
[2025-10-13 02:31:03] 2025-10-13 06:30:23,965 | INFO     | all data control threads have been joined
[2025-10-13 02:31:03] 2025-10-13 06:30:24,018 | INFO     | all payload control threads have been joined
[2025-10-13 02:31:03] 2025-10-13 06:30:24,400 | INFO     | [job] queue monitor thread has finished
[2025-10-13 02:31:03] 2025-10-13 06:30:24,401 | INFO     | [job] retrieve thread has finished
[2025-10-13 02:31:03] 2025-10-13 06:30:24,442 | INFO     | [job] job monitor thread has finished
[2025-10-13 02:31:03] 2025-10-13 06:30:24,611 | INFO     | all job control threads have been joined
[2025-10-13 02:31:03] 2025-10-13 06:30:24,971 | INFO     | [data] control thread has finished
[2025-10-13 02:31:03] 2025-10-13 06:30:25,024 | INFO     | [payload] control thread has finished
[2025-10-13 02:31:03] 2025-10-13 06:30:25,059 | INFO     | [payload] validate_post thread has finished
[2025-10-13 02:31:03] 2025-10-13 06:30:25,289 | INFO     | [data] copytool_in thread has finished
[2025-10-13 02:31:03] 2025-10-13 06:30:25,311 | INFO     | [job] validate thread has finished
[2025-10-13 02:31:03] 2025-10-13 06:30:25,335 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 02:31:03] 2025-10-13 06:30:25,402 | INFO     | [data] copytool_out thread has finished
[2025-10-13 02:31:03] 2025-10-13 06:30:25,407 | INFO     | [payload] failed_post thread has finished
[2025-10-13 02:31:03] 2025-10-13 06:30:25,510 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 02:31:03] 2025-10-13 06:30:25,532 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 02:31:03] 2025-10-13 06:30:25,616 | INFO     | [job] control thread has finished
[2025-10-13 02:31:03] 2025-10-13 06:30:26,203 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 02:31:03] 2025-10-13 06:30:30,204 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 02:31:03] 2025-10-13 06:30:34,400 | INFO     | job.realtimelogging is not enabled
[2025-10-13 02:31:03] 2025-10-13 06:30:35,405 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 02:31:03] 2025-10-13 06:30:53,609 | INFO     | PID=2328 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-13 02:31:03] 2025-10-13 06:30:53,610 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 02:31:03] 2025-10-13 06:30:53,610 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 02:31:03] 2025-10-13 06:30:53,611 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 02:31:03] 2025-10-13 06:30:55,743 | INFO     | [monitor] cgroup control has ended
[2025-10-13 02:31:03] 2025-10-13 06:30:57,780 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140207342442304)>', '<ExcThread(monitor, started 140206254585600)>']
[2025-10-13 02:31:03] 2025-10-13 06:30:58,630 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 02:31:03] 2025-10-13 06:30:58,630 | INFO     | [monitor] control thread has ended
[2025-10-13 02:31:03] 2025-10-13 06:31:02,798 | INFO     | all workflow threads have been joined
[2025-10-13 02:31:03] 2025-10-13 06:31:02,798 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 02:31:03] 2025-10-13 06:31:02,799 | INFO     | traces error code: 0
[2025-10-13 02:31:03] 2025-10-13 06:31:02,799 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 02:31:03] 2025-10-13 06:31:02,916 [wrapper] ==== pilot stdout END ====
[2025-10-13 02:31:03] 2025-10-13 06:31:02,921 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 02:31:03] 2025-10-13 06:31:02,925 [wrapper] pilotpid: 2328
[2025-10-13 02:31:03] 2025-10-13 06:31:02,930 [wrapper] Pilot exit status: 0
[2025-10-13 02:31:03] 2025-10-13 06:31:02,950 [wrapper] pandaids: 6840834662
[2025-10-13 02:31:03] 2025-10-13 06:31:02,994 [wrapper] cleanup supervisor_pilot  1948 2329
[2025-10-13 02:31:03] 2025-10-13 06:31:02,998 [wrapper] Test setup, not cleaning
[2025-10-13 02:31:03] 2025-10-13 06:31:03,003 [wrapper] apfmon messages muted
[2025-10-13 02:31:03] 2025-10-13 06:31:03,007 [wrapper] ==== wrapper stdout END ====
[2025-10-13 02:31:03] 2025-10-13 06:31:03,012 [wrapper] ==== wrapper stderr END ====
[2025-10-13 02:31:03]  *** Error codes and diagnostics ***
[2025-10-13 02:31:03]     "exeErrorCode": 0,
[2025-10-13 02:31:03]     "exeErrorDiag": "",
[2025-10-13 02:31:03]     "pilotErrorCode": 0,
[2025-10-13 02:31:03]     "pilotErrorDiag": "",
[2025-10-13 02:31:03]  *** Listing of results directory ***
[2025-10-13 02:31:03] total 409224
[2025-10-13 02:31:03] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 17:31 pilot3.tar.gz
[2025-10-13 02:31:03] -rwx------ 1 boincer umatlas     36292 Oct 12 17:42 runpilot2-wrapper.sh
[2025-10-13 02:31:03] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 17:42 queuedata.json
[2025-10-13 02:31:03] -rw-r--r-- 1 boincer umatlas       100 Oct 13 00:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 02:31:03] -rwxr-xr-x 1 boincer umatlas      7986 Oct 13 00:25 run_atlas
[2025-10-13 02:31:03] -rw-r--r-- 1 boincer umatlas       105 Oct 13 00:25 job.xml
[2025-10-13 02:31:03] -rw-r--r-- 2 boincer umatlas 219133801 Oct 13 00:25 EVNT.46676267._002203.pool.root.1
[2025-10-13 02:31:03] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 00:25 start_atlas.sh
[2025-10-13 02:31:03] drwxrwx--x 2 boincer umatlas      4096 Oct 13 00:25 shared
[2025-10-13 02:31:03] -rw-r--r-- 2 boincer umatlas    569681 Oct 13 00:25 input.tar.gz
[2025-10-13 02:31:03] -rw-r--r-- 1 boincer umatlas         0 Oct 13 00:25 boinc_lockfile
[2025-10-13 02:31:03] -rw-r--r-- 1 boincer umatlas      2550 Oct 13 00:25 pandaJob.out
[2025-10-13 02:31:03] -rw------- 1 boincer umatlas    974365 Oct 13 00:25 agis_schedconf.cvmfs.json
[2025-10-13 02:31:03] -rw------- 1 boincer umatlas   1560580 Oct 13 00:25 agis_ddmendpoints.agis.ALL.json
[2025-10-13 02:31:03] drwx------ 5 boincer umatlas      4096 Oct 13 00:25 pilot3
[2025-10-13 02:31:03] -rw-r--r-- 1 boincer umatlas      5909 Oct 13 02:29 init_data.xml
[2025-10-13 02:31:03] -rw------- 1 boincer umatlas 193173348 Oct 13 02:29 HITS.46676269._090255.pool.root.1
[2025-10-13 02:31:03] -rw-r--r-- 1 boincer umatlas       530 Oct 13 02:29 boinc_task_state.xml
[2025-10-13 02:31:03] -rw------- 1 boincer umatlas      1049 Oct 13 02:30 memory_monitor_summary.json
[2025-10-13 02:31:03] -rw------- 1 boincer umatlas    364932 Oct 13 02:30 log.46676269._090255.job.log.tgz.1
[2025-10-13 02:31:03] -rw------- 1 boincer umatlas      7850 Oct 13 02:30 heartbeat.json
[2025-10-13 02:31:03] -rw-r--r-- 1 boincer umatlas        27 Oct 13 02:30 wrapper_checkpoint.txt
[2025-10-13 02:31:03] -rw-r--r-- 1 boincer umatlas      8192 Oct 13 02:30 boinc_mmap_file
[2025-10-13 02:31:03] -rw------- 1 boincer umatlas        95 Oct 13 02:30 pilot_heartbeat.json
[2025-10-13 02:31:03] -rw------- 1 boincer umatlas      5003 Oct 13 02:31 pilotlog.txt
[2025-10-13 02:31:03] -rw------- 1 boincer umatlas   1054441 Oct 13 02:31 log.46676269._090255.job.log.1
[2025-10-13 02:31:03] -rw------- 1 boincer umatlas       357 Oct 13 02:31 output.list
[2025-10-13 02:31:03] -rw-r--r-- 1 boincer umatlas       620 Oct 13 02:31 runtime_log
[2025-10-13 02:31:03] -rw------- 1 boincer umatlas   1433600 Oct 13 02:31 result.tar.gz
[2025-10-13 02:31:03] -rw-r--r-- 1 boincer umatlas      8703 Oct 13 02:31 runtime_log.err
[2025-10-13 02:31:03] -rw------- 1 boincer umatlas       659 Oct 13 02:31 npgNDmU0IS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmMjlNDm3uPifm.diag
[2025-10-13 02:31:03] -rw-r--r-- 1 boincer umatlas     21062 Oct 13 02:31 stderr.txt
[2025-10-13 02:31:03] HITS file was successfully produced:
[2025-10-13 02:31:03] -rw------- 1 boincer umatlas 193173348 Oct 13 02:29 shared/HITS.pool.root.1
[2025-10-13 02:31:03]  *** Contents of shared directory: ***
[2025-10-13 02:31:03] total 404632
[2025-10-13 02:31:03] -rw-r--r-- 2 boincer umatlas 219133801 Oct 13 00:25 ATLAS.root_0
[2025-10-13 02:31:03] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 00:25 start_atlas.sh
[2025-10-13 02:31:03] -rw-r--r-- 2 boincer umatlas    569681 Oct 13 00:25 input.tar.gz
[2025-10-13 02:31:03] -rw------- 1 boincer umatlas 193173348 Oct 13 02:29 HITS.pool.root.1
[2025-10-13 02:31:03] -rw------- 1 boincer umatlas   1433600 Oct 13 02:31 result.tar.gz
02:31:04 (30970): run_atlas exited; CPU time 54798.606061
02:31:04 (30970): called boinc_finish(0)

</stderr_txt>
]]>

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