Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
15:12:35 (3895930): wrapper (7.7.26015): starting
15:12:35 (3895930): wrapper: running run_atlas (--nthreads 3)
[2025-10-13 15:12:35] Arguments: --nthreads 3
[2025-10-13 15:12:35] Threads: 3
[2025-10-13 15:12:35] Checking for CVMFS
[2025-10-13 15:12:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 15:12:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 15:12:35] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 15:12:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 15:12:35] 2.9.2.0 796922 5828 84956 151661 2 57 32882271 36864001 0 130560 0 4628443 99.991 201533 969 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 15:12:35] CVMFS is ok
[2025-10-13 15:12:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 15:12:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 15:12:35] Further information can be found at the LHC@home message board.
[2025-10-13 15:12:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 15:12:35] Checking for apptainer binary...
[2025-10-13 15:12:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 15:12:35] Running /usr/bin/apptainer --version
[2025-10-13 15:12:36] apptainer version 1.4.1-1.1
[2025-10-13 15:12:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 15:12:36] atlasA303
[2025-10-13 15:12:36] apptainer works
[2025-10-13 15:12:36] Set ATHENA_PROC_NUMBER=3
[2025-10-13 15:12:36] Set ATHENA_CORE_NUMBER=3
[2025-10-13 15:12:36] Starting ATLAS job with PandaID=6841125972
[2025-10-13 15:12:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 16:38:11]  *** The last 200 lines of the pilot log: ***
[2025-10-13 16:38:11] 2025-10-13 14:37:40,169 | INFO     | executing command: cat /etc/os-release
[2025-10-13 16:38:11] 2025-10-13 14:37:40,178 | INFO     | cat /etc/os-release:
[2025-10-13 16:38:11] NAME="CentOS Linux"
[2025-10-13 16:38:11] VERSION="7 (Core)"
[2025-10-13 16:38:11] ID="centos"
[2025-10-13 16:38:11] ID_LIKE="rhel fedora"
[2025-10-13 16:38:11] VERSION_ID="7"
[2025-10-13 16:38:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 16:38:11] ANSI_COLOR="0;31"
[2025-10-13 16:38:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 16:38:11] HOME_URL="https://www.centos.org/"
[2025-10-13 16:38:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 16:38:11] 
[2025-10-13 16:38:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 16:38:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 16:38:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 16:38:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 16:38:11] 
[2025-10-13 16:38:11] 2025-10-13 14:37:40,178 | INFO     | ***************************************
[2025-10-13 16:38:11] 2025-10-13 14:37:40,682 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-13 16:38:11] 2025-10-13 14:37:40,696 | INFO     | sufficient remaining disk space (372575830016 B)
[2025-10-13 16:38:11] 2025-10-13 14:37:40,696 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 16:38:11] 2025-10-13 14:37:40,696 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 16:38:11] 2025-10-13 14:37:40,696 | INFO     | update_server=False
[2025-10-13 16:38:11] 2025-10-13 14:37:40,696 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 16:38:11] 2025-10-13 14:37:40,696 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 16:38:11] 2025-10-13 14:37:40,696 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 16:38:11] 2025-10-13 14:37:40,938 | INFO     | all data control threads have been joined
[2025-10-13 16:38:11] 2025-10-13 14:37:41,694 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 16:38:11] 2025-10-13 14:37:41,694 | INFO     | aborting loop
[2025-10-13 16:38:11] 2025-10-13 14:37:41,701 | INFO     | [job] retrieve thread has finished
[2025-10-13 16:38:11] 2025-10-13 14:37:41,701 | INFO     | [job] queue monitor thread has finished
[2025-10-13 16:38:11] 2025-10-13 14:37:41,730 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 16:38:11] 2025-10-13 14:37:41,844 | INFO     | all payload control threads have been joined
[2025-10-13 16:38:11] 2025-10-13 14:37:41,944 | INFO     | [data] control thread has finished
[2025-10-13 16:38:11] 2025-10-13 14:37:41,954 | INFO     | all job control threads have been joined
[2025-10-13 16:38:11] 2025-10-13 14:37:42,203 | INFO     | [payload] failed_post thread has finished
[2025-10-13 16:38:11] 2025-10-13 14:37:42,680 | INFO     | [data] copytool_in thread has finished
[2025-10-13 16:38:11] 2025-10-13 14:37:42,700 | INFO     | [job] job monitor thread has finished
[2025-10-13 16:38:11] 2025-10-13 14:37:42,702 | INFO     | [data] copytool_out thread has finished
[2025-10-13 16:38:11] 2025-10-13 14:37:42,728 | INFO     | [payload] validate_post thread has finished
[2025-10-13 16:38:11] 2025-10-13 14:37:42,850 | INFO     | [payload] control thread has finished
[2025-10-13 16:38:11] 2025-10-13 14:37:42,947 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 16:38:11] 2025-10-13 14:37:42,960 | INFO     | [job] control thread has finished
[2025-10-13 16:38:11] 2025-10-13 14:37:43,013 | INFO     | [job] validate thread has finished
[2025-10-13 16:38:11] 2025-10-13 14:37:43,041 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 16:38:11] 2025-10-13 14:37:43,197 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 16:38:11] 2025-10-13 14:37:46,955 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 16:38:11] 2025-10-13 14:37:47,280 | INFO     | [monitor] cgroup control has ended
[2025-10-13 16:38:11] 2025-10-13 14:37:51,401 | INFO     | job.realtimelogging is not enabled
[2025-10-13 16:38:11] 2025-10-13 14:37:52,406 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 16:38:11] 2025-10-13 14:37:52,602 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140198679795520)>', '<ExcThread(monitor, started 140198058911488)>']
[2025-10-13 16:38:11] 2025-10-13 14:37:57,605 | INFO     | all workflow threads have been joined
[2025-10-13 16:38:11] 2025-10-13 14:37:57,606 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 16:38:11] 2025-10-13 14:37:57,606 | INFO     | traces error code: 0
[2025-10-13 16:38:11] 2025-10-13 14:37:57,606 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 16:38:11] 2025-10-13 14:38:11,177 | INFO     | PID=3899673 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 16:38:11] 2025-10-13 14:38:11,178 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 16:38:11] 2025-10-13 14:38:11,178 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 16:38:11] 2025-10-13 14:38:11,178 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 16:38:11] 2025-10-13 14:38:11,178 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 16:38:11] 2025-10-13 14:38:11,178 | INFO     | [monitor] control thread has ended
[2025-10-13 16:38:11] 2025-10-13 14:38:11,226 [wrapper] ==== pilot stdout END ====
[2025-10-13 16:38:11] 2025-10-13 14:38:11,228 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 16:38:11] 2025-10-13 14:38:11,231 [wrapper] pilotpid: 3899673
[2025-10-13 16:38:11] 2025-10-13 14:38:11,233 [wrapper] Pilot exit status: 0
[2025-10-13 16:38:11] 2025-10-13 14:38:11,241 [wrapper] pandaids: 6841125972
[2025-10-13 16:38:11] 2025-10-13 14:38:11,258 [wrapper] cleanup supervisor_pilot 3935167 3899674
[2025-10-13 16:38:11] 2025-10-13 14:38:11,261 [wrapper] Test setup, not cleaning
[2025-10-13 16:38:11] 2025-10-13 14:38:11,263 [wrapper] apfmon messages muted
[2025-10-13 16:38:11] 2025-10-13 14:38:11,266 [wrapper] ==== wrapper stdout END ====
[2025-10-13 16:38:11] 2025-10-13 14:38:11,268 [wrapper] ==== wrapper stderr END ====
[2025-10-13 16:38:11]  *** Error codes and diagnostics ***
[2025-10-13 16:38:11]     "exeErrorCode": 0,
[2025-10-13 16:38:11]     "exeErrorDiag": "",
[2025-10-13 16:38:11]     "pilotErrorCode": 0,
[2025-10-13 16:38:11]     "pilotErrorDiag": "",
[2025-10-13 16:38:11]  *** Listing of results directory ***
[2025-10-13 16:38:11] total 412348
[2025-10-13 16:38:11] -rw-r--r-- 1 boinc boinc    557409 Oct 13 04:00 pilot3.tar.gz
[2025-10-13 16:38:11] -rwx------ 1 boinc boinc     36292 Oct 13 04:18 runpilot2-wrapper.sh
[2025-10-13 16:38:11] -rw-r--r-- 1 boinc boinc      5112 Oct 13 04:18 queuedata.json
[2025-10-13 16:38:11] -rw-r--r-- 1 boinc boinc       100 Oct 13 15:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 16:38:11] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 15:12 run_atlas
[2025-10-13 16:38:11] -rw-r--r-- 1 boinc boinc       105 Oct 13 15:12 job.xml
[2025-10-13 16:38:11] -rw-r--r-- 2 boinc boinc 221234308 Oct 13 15:12 EVNT.46676267._004370.pool.root.1
[2025-10-13 16:38:11] -rw-r--r-- 2 boinc boinc    569678 Oct 13 15:12 input.tar.gz
[2025-10-13 16:38:11] -rw-r--r-- 2 boinc boinc     15120 Oct 13 15:12 start_atlas.sh
[2025-10-13 16:38:11] drwxrwx--x 2 boinc boinc      4096 Oct 13 15:12 shared
[2025-10-13 16:38:11] -rw-r--r-- 1 boinc boinc         0 Oct 13 15:12 boinc_setup_complete
[2025-10-13 16:38:11] -rw-r--r-- 1 boinc boinc      6450 Oct 13 15:12 init_data.xml
[2025-10-13 16:38:11] -rw-r--r-- 1 boinc boinc         0 Oct 13 15:12 boinc_lockfile
[2025-10-13 16:38:11] -rw-r--r-- 1 boinc boinc      2550 Oct 13 15:12 pandaJob.out
[2025-10-13 16:38:11] -rw------- 1 boinc boinc    972497 Oct 13 15:12 agis_schedconf.cvmfs.json
[2025-10-13 16:38:11] -rw------- 1 boinc boinc   1560580 Oct 13 15:12 agis_ddmendpoints.agis.ALL.json
[2025-10-13 16:38:11] drwx------ 5 boinc boinc      4096 Oct 13 15:12 pilot3
[2025-10-13 16:38:11] -rw------- 1 boinc boinc 195118580 Oct 13 16:37 HITS.46676269._094745.pool.root.1
[2025-10-13 16:38:11] -rw-r--r-- 1 boinc boinc       529 Oct 13 16:37 boinc_task_state.xml
[2025-10-13 16:38:11] -rw------- 1 boinc boinc      1026 Oct 13 16:37 memory_monitor_summary.json
[2025-10-13 16:38:11] -rw------- 1 boinc boinc    253614 Oct 13 16:37 log.46676269._094745.job.log.tgz.1
[2025-10-13 16:38:11] -rw------- 1 boinc boinc      7751 Oct 13 16:37 heartbeat.json
[2025-10-13 16:38:11] -rw-r--r-- 1 boinc boinc        27 Oct 13 16:37 wrapper_checkpoint.txt
[2025-10-13 16:38:11] -rw-r--r-- 1 boinc boinc      8192 Oct 13 16:37 boinc_mmap_file
[2025-10-13 16:38:11] -rw------- 1 boinc boinc       747 Oct 13 16:38 pilotlog.txt
[2025-10-13 16:38:11] -rw------- 1 boinc boinc        95 Oct 13 16:38 pilot_heartbeat.json
[2025-10-13 16:38:11] -rw------- 1 boinc boinc    746542 Oct 13 16:38 log.46676269._094745.job.log.1
[2025-10-13 16:38:11] -rw------- 1 boinc boinc       357 Oct 13 16:38 output.list
[2025-10-13 16:38:11] -rw-r--r-- 1 boinc boinc       620 Oct 13 16:38 runtime_log
[2025-10-13 16:38:11] -rw------- 1 boinc boinc   1024000 Oct 13 16:38 result.tar.gz
[2025-10-13 16:38:11] -rw-r--r-- 1 boinc boinc      8792 Oct 13 16:38 runtime_log.err
[2025-10-13 16:38:11] -rw------- 1 boinc boinc       661 Oct 13 16:38 5vGLDmlJNS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmtTmNDmBUxAan.diag
[2025-10-13 16:38:11] -rw-r--r-- 1 boinc boinc      8980 Oct 13 16:38 stderr.txt
[2025-10-13 16:38:11] HITS file was successfully produced:
[2025-10-13 16:38:11] -rw------- 1 boinc boinc 195118580 Oct 13 16:37 shared/HITS.pool.root.1
[2025-10-13 16:38:11]  *** Contents of shared directory: ***
[2025-10-13 16:38:11] total 408184
[2025-10-13 16:38:11] -rw-r--r-- 2 boinc boinc 221234308 Oct 13 15:12 ATLAS.root_0
[2025-10-13 16:38:11] -rw-r--r-- 2 boinc boinc    569678 Oct 13 15:12 input.tar.gz
[2025-10-13 16:38:11] -rw-r--r-- 2 boinc boinc     15120 Oct 13 15:12 start_atlas.sh
[2025-10-13 16:38:11] -rw------- 1 boinc boinc 195118580 Oct 13 16:37 HITS.pool.root.1
[2025-10-13 16:38:11] -rw------- 1 boinc boinc   1024000 Oct 13 16:38 result.tar.gz
16:38:13 (3895930): run_atlas exited; CPU time 14602.044525
16:38:13 (3895930): called boinc_finish(0)

</stderr_txt>
]]>

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