Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:18:17 (1446160): wrapper (7.7.26015): starting
08:18:17 (1446160): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 08:18:17] Arguments: --nthreads 8
[2025-10-13 08:18:17] Threads: 8
[2025-10-13 08:18:17] Checking for CVMFS
[2025-10-13 08:18:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 08:18:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 08:18:19] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 08:18:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 08:18:21] 2.13.2.0 5344 45643 370200 151661 2 48 30095457 32935936 19879 16776704 0 116861167 99.607 121214892 31574 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-13 08:18:21] CVMFS is ok
[2025-10-13 08:18:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 08:18:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 08:18:21] Further information can be found at the LHC@home message board.
[2025-10-13 08:18:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 08:18:21] Checking for apptainer binary...
[2025-10-13 08:18:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 08:18:21] Running /usr/bin/apptainer --version
[2025-10-13 08:18:21] apptainer version 1.4.3-1.el9
[2025-10-13 08:18:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 08:18:22] c6-1-26-1.aglt2.org
[2025-10-13 08:18:22] apptainer works
[2025-10-13 08:18:22] Set ATHENA_PROC_NUMBER=8
[2025-10-13 08:18:22] Set ATHENA_CORE_NUMBER=8
[2025-10-13 08:18:22] Starting ATLAS job with PandaID=6841177432
[2025-10-13 08:18:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 13:07:09]  *** The last 200 lines of the pilot log: ***
[2025-10-13 13:07:09] 2025-10-13 17:06:04,851 | INFO     | time since job start (17193s) is within the limit (172800.0s)
[2025-10-13 13:07:09] 2025-10-13 17:06:05,094 | INFO     | monitor loop #1003: job 0:6841177432 is in state 'finished'
[2025-10-13 13:07:09] 2025-10-13 17:06:05,094 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 13:07:09] 2025-10-13 17:06:05,643 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-13 13:07:09] 2025-10-13 17:06:05,650 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2728.657910714285
[2025-10-13 13:07:09] 2025-10-13 17:06:05,663 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6841177432/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 13:07:09] 2025-10-13 17:06:05,664 | INFO     | extracted standard info from prmon json
[2025-10-13 13:07:09] 2025-10-13 17:06:05,664 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 13:07:09] 2025-10-13 17:06:05,664 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 13:07:09] 2025-10-13 17:06:05,664 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 13:07:09] 2025-10-13 17:06:05,664 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 13:07:09] 2025-10-13 17:06:05,668 | INFO     | fitting pss+swap vs Time
[2025-10-13 13:07:09] 2025-10-13 17:06:05,669 | INFO     | sum of square deviations: 6734044853.677444
[2025-10-13 13:07:09] 2025-10-13 17:06:05,671 | INFO     | sum of deviations: -29026671803.16131
[2025-10-13 13:07:09] 2025-10-13 17:06:05,671 | INFO     | mean x: 1760366606.516129
[2025-10-13 13:07:09] 2025-10-13 17:06:05,671 | INFO     | mean y: 2364882.813620072
[2025-10-13 13:07:09] 2025-10-13 17:06:05,671 | INFO     | -- intersect: 7590313114.652946
[2025-10-13 13:07:09] 2025-10-13 17:06:05,671 | INFO     | intersect: 7590313114.652946
[2025-10-13 13:07:09] 2025-10-13 17:06:05,672 | INFO     | chi2: 3.2072212627598056
[2025-10-13 13:07:09] 2025-10-13 17:06:05,672 | INFO     | sum of square deviations: 6378465207.868654
[2025-10-13 13:07:09] 2025-10-13 17:06:05,674 | INFO     | sum of deviations: -26667485530.40143
[2025-10-13 13:07:09] 2025-10-13 17:06:05,674 | INFO     | mean x: 1760366454.0218978
[2025-10-13 13:07:09] 2025-10-13 17:06:05,674 | INFO     | mean y: 2365886.2335766423
[2025-10-13 13:07:09] 2025-10-13 17:06:05,674 | INFO     | -- intersect: 7362215851.852409
[2025-10-13 13:07:09] 2025-10-13 17:06:05,674 | INFO     | intersect: 7362215851.852409
[2025-10-13 13:07:09] 2025-10-13 17:06:05,675 | INFO     | chi2: 3.2063491578498104
[2025-10-13 13:07:09] 2025-10-13 17:06:05,675 | INFO     | current chi2=3.2063491578498104 (change=0.027191915946724408 %)
[2025-10-13 13:07:09] 2025-10-13 17:06:05,675 | INFO     | right removable region: 273
[2025-10-13 13:07:09] 2025-10-13 17:06:05,675 | INFO     | sum of square deviations: 6378394264.8211775
[2025-10-13 13:07:09] 2025-10-13 17:06:05,677 | INFO     | sum of deviations: -90656890331.78114
[2025-10-13 13:07:09] 2025-10-13 17:06:05,677 | INFO     | mean x: 1760366759.0255475
[2025-10-13 13:07:09] 2025-10-13 17:06:05,677 | INFO     | mean y: 2391195.5401459853
[2025-10-13 13:07:09] 2025-10-13 17:06:05,677 | INFO     | -- intersect: 25022697183.346035
[2025-10-13 13:07:09] 2025-10-13 17:06:05,677 | INFO     | intersect: 25022697183.346035
[2025-10-13 13:07:09] 2025-10-13 17:06:05,677 | INFO     | chi2: 0.7603604684015639
[2025-10-13 13:07:09] 2025-10-13 17:06:05,678 | INFO     | current chi2=0.7603604684015639 (change=76.29223536179491 %)
[2025-10-13 13:07:09] 2025-10-13 17:06:05,678 | INFO     | sum of square deviations: 6035504692.981403
[2025-10-13 13:07:09] 2025-10-13 17:06:05,679 | INFO     | sum of deviations: -101338920071.31975
[2025-10-13 13:07:09] 2025-10-13 17:06:05,679 | INFO     | mean x: 1760366911.5315986
[2025-10-13 13:07:09] 2025-10-13 17:06:05,679 | INFO     | mean y: 2395917.7434944236
[2025-10-13 13:07:09] 2025-10-13 17:06:05,680 | INFO     | -- intersect: 29559771948.176872
[2025-10-13 13:07:09] 2025-10-13 17:06:05,680 | INFO     | intersect: 29559771948.176872
[2025-10-13 13:07:09] 2025-10-13 17:06:05,680 | INFO     | chi2: 0.6189360240188053
[2025-10-13 13:07:09] 2025-10-13 17:06:05,680 | INFO     | current chi2=0.6189360240188053 (change=18.59965769657413 %)
[2025-10-13 13:07:09] 2025-10-13 17:06:05,680 | INFO     | left removable region: 20
[2025-10-13 13:07:09] 2025-10-13 17:06:05,680 | INFO     | sum of square deviations: 5021228530.3004055
[2025-10-13 13:07:09] 2025-10-13 17:06:05,682 | INFO     | sum of deviations: -75377881754.4664
[2025-10-13 13:07:09] 2025-10-13 17:06:05,682 | INFO     | mean x: 1760367033.5612648
[2025-10-13 13:07:09] 2025-10-13 17:06:05,682 | INFO     | mean y: 2386550.7075098814
[2025-10-13 13:07:09] 2025-10-13 17:06:05,682 | INFO     | -- intersect: 26428735660.195892
[2025-10-13 13:07:09] 2025-10-13 17:06:05,682 | INFO     | intersect: 26428735660.195892
[2025-10-13 13:07:09] 2025-10-13 17:06:05,682 | INFO     | chi2: 0.5722630693012506
[2025-10-13 13:07:09] 2025-10-13 17:06:05,682 | INFO     | -- intersect: 26428735660.195892
[2025-10-13 13:07:09] 2025-10-13 17:06:05,683 | INFO     | current memory leak: -15.01 B/s (using 253 data points, chi2=0.57)
[2025-10-13 13:07:09] 2025-10-13 17:06:05,683 | INFO     | could have reported an average CPU frequency of 2711 MHz (13 samples)
[2025-10-13 13:07:09] 2025-10-13 17:06:05,683 | INFO     | ..............................
[2025-10-13 13:07:09] 2025-10-13 17:06:05,683 | INFO     | . Timing measurements:
[2025-10-13 13:07:09] 2025-10-13 17:06:05,683 | INFO     | . get job = 0 s
[2025-10-13 13:07:09] 2025-10-13 17:06:05,683 | INFO     | . initial setup = 5 s
[2025-10-13 13:07:09] 2025-10-13 17:06:05,684 | INFO     | . payload setup = 46 s
[2025-10-13 13:07:09] 2025-10-13 17:06:05,684 | INFO     | . stage-in = 0 s
[2025-10-13 13:07:09] 2025-10-13 17:06:05,684 | INFO     | . payload execution = 17055 s
[2025-10-13 13:07:09] 2025-10-13 17:06:05,684 | INFO     | . stage-out = 2 s
[2025-10-13 13:07:09] 2025-10-13 17:06:05,684 | INFO     | . log creation = 0 s
[2025-10-13 13:07:09] 2025-10-13 17:06:05,684 | INFO     | ..............................
[2025-10-13 13:07:09] 2025-10-13 17:06:05,884 | INFO     | 
[2025-10-13 13:07:09] 2025-10-13 17:06:05,884 | INFO     | job summary report
[2025-10-13 13:07:09] 2025-10-13 17:06:05,884 | INFO     | --------------------------------------------------
[2025-10-13 13:07:09] 2025-10-13 17:06:05,884 | INFO     | PanDA job id: 6841177432
[2025-10-13 13:07:09] 2025-10-13 17:06:05,884 | INFO     | task id: 46676269
[2025-10-13 13:07:09] 2025-10-13 17:06:05,884 | INFO     | errors: (none)
[2025-10-13 13:07:09] 2025-10-13 17:06:05,884 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 13:07:09] 2025-10-13 17:06:05,884 | INFO     | pilot state: finished 
[2025-10-13 13:07:09] 2025-10-13 17:06:05,884 | INFO     | transexitcode: 0
[2025-10-13 13:07:09] 2025-10-13 17:06:05,884 | INFO     | exeerrorcode: 0
[2025-10-13 13:07:09] 2025-10-13 17:06:05,884 | INFO     | exeerrordiag: 
[2025-10-13 13:07:09] 2025-10-13 17:06:05,885 | INFO     | exitcode: 0
[2025-10-13 13:07:09] 2025-10-13 17:06:05,885 | INFO     | exitmsg: OK
[2025-10-13 13:07:09] 2025-10-13 17:06:05,885 | INFO     | cpuconsumptiontime: 45557 s
[2025-10-13 13:07:09] 2025-10-13 17:06:05,885 | INFO     | nevents: 400
[2025-10-13 13:07:09] 2025-10-13 17:06:05,885 | INFO     | neventsw: 0
[2025-10-13 13:07:09] 2025-10-13 17:06:05,885 | INFO     | pid: 1485685
[2025-10-13 13:07:09] 2025-10-13 17:06:05,885 | INFO     | pgrp: 1485685
[2025-10-13 13:07:09] 2025-10-13 17:06:05,885 | INFO     | corecount: 8
[2025-10-13 13:07:09] 2025-10-13 17:06:05,885 | INFO     | event service: False
[2025-10-13 13:07:09] 2025-10-13 17:06:05,885 | INFO     | sizes: {0: 2347978, 1: 2348579, 2: 2348862, 13: 2348862, 24: 2348918, 31: 2349208, 36: 2349364, 17106: 2380792, 17107: 2380791, 17111: 2389845, 17113: 2389901, 171
[2025-10-13 13:07:09] 2025-10-13 17:06:05,885 | INFO     | --------------------------------------------------
[2025-10-13 13:07:09] 2025-10-13 17:06:05,885 | INFO     | 
[2025-10-13 13:07:09] 2025-10-13 17:06:05,886 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-13 13:07:09] 2025-10-13 17:06:05,909 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 13:07:09] 2025-10-13 17:06:05,909 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 13:07:09] 2025-10-13 17:06:05,910 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 13:07:09] 2025-10-13 17:06:05,910 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 13:07:09] 2025-10-13 17:06:05,910 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 13:07:09] 2025-10-13 17:06:05,910 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 13:07:09] 2025-10-13 17:06:05,910 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 13:07:09] 2025-10-13 17:06:05,910 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 13:07:09] 2025-10-13 17:06:05,910 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 13:07:09] 2025-10-13 17:06:05,910 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 13:07:09] 2025-10-13 17:06:05,910 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 13:07:09] 2025-10-13 17:06:05,910 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 13:07:09] 2025-10-13 17:06:05,910 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 13:07:09] 2025-10-13 17:06:05,910 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 13:07:09] 2025-10-13 17:06:05,910 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 13:07:09] 2025-10-13 17:06:05,910 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 13:07:09] 2025-10-13 17:06:05,910 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 13:07:09] 2025-10-13 17:06:05,910 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 13:07:09] 2025-10-13 17:06:05,911 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 13:07:09] 2025-10-13 17:06:05,911 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 13:07:09] 2025-10-13 17:06:05,911 | INFO     | job 6841177432 has completed (purged errors)
[2025-10-13 13:07:09] 2025-10-13 17:06:05,911 | INFO     | overall cleanup function is called
[2025-10-13 13:07:09] 2025-10-13 17:06:06,926 | INFO     | --- collectZombieJob: --- 10, [1485685]
[2025-10-13 13:07:09] 2025-10-13 17:06:06,926 | INFO     | zombie collector waiting for pid 1485685
[2025-10-13 13:07:09] 2025-10-13 17:06:06,926 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 13:07:09] 2025-10-13 17:06:06,926 | INFO     | collected zombie processes
[2025-10-13 13:07:09] 2025-10-13 17:06:06,926 | INFO     | will attempt to kill all subprocesses of pid=1485685
[2025-10-13 13:07:09] 2025-10-13 17:06:07,525 | INFO     | process IDs to be killed: [1485685] (in reverse order)
[2025-10-13 13:07:09] 2025-10-13 17:06:07,722 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 13:07:09] 2025-10-13 17:06:07,722 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 13:07:09] 2025-10-13 17:06:07,748 | INFO     | did not find any defunct processes belonging to 1485685
[2025-10-13 13:07:09] 2025-10-13 17:06:07,794 | INFO     | did not find any defunct processes belonging to 1485685
[2025-10-13 13:07:09] 2025-10-13 17:06:07,795 | INFO     | ready for new job
[2025-10-13 13:07:09] 2025-10-13 17:06:07,795 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 13:07:09] 2025-10-13 17:06:07,802 | INFO     | ***************************************
[2025-10-13 13:07:09] 2025-10-13 17:06:07,802 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 13:07:09] 2025-10-13 17:06:07,802 | INFO     | ***************************************
[2025-10-13 13:07:09] 2025-10-13 17:06:07,802 | INFO     | 
[2025-10-13 13:07:09] 2025-10-13 17:06:07,819 | INFO     | architecture information:
[2025-10-13 13:07:09] 2025-10-13 17:06:07,824 | INFO     | executing command: cat /etc/os-release
[2025-10-13 13:07:09] 2025-10-13 17:06:07,879 | INFO     | cat /etc/os-release:
[2025-10-13 13:07:09] NAME="CentOS Linux"
[2025-10-13 13:07:09] VERSION="7 (Core)"
[2025-10-13 13:07:09] ID="centos"
[2025-10-13 13:07:09] ID_LIKE="rhel fedora"
[2025-10-13 13:07:09] VERSION_ID="7"
[2025-10-13 13:07:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 13:07:09] ANSI_COLOR="0;31"
[2025-10-13 13:07:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 13:07:09] HOME_URL="https://www.centos.org/"
[2025-10-13 13:07:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 13:07:09] 
[2025-10-13 13:07:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 13:07:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 13:07:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 13:07:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 13:07:09] 
[2025-10-13 13:07:09] 2025-10-13 17:06:07,880 | INFO     | ***************************************
[2025-10-13 13:07:09] 2025-10-13 17:06:08,383 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-13 13:07:09] 2025-10-13 17:06:08,472 | INFO     | sufficient remaining disk space (75554095104 B)
[2025-10-13 13:07:09] 2025-10-13 17:06:08,473 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 13:07:09] 2025-10-13 17:06:08,473 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 13:07:09] 2025-10-13 17:06:08,474 | INFO     | update_server=False
[2025-10-13 13:07:09] 2025-10-13 17:06:08,474 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 13:07:09] 2025-10-13 17:06:08,474 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 13:07:09] 2025-10-13 17:06:08,492 | INFO     | all payload control threads have been joined
[2025-10-13 13:07:09] 2025-10-13 17:06:08,621 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 13:07:09] 2025-10-13 17:06:08,625 | INFO     | aborting loop
[2025-10-13 13:07:09] 2025-10-13 17:06:08,749 | INFO     | all data control threads have been joined
[2025-10-13 13:07:09] 2025-10-13 17:06:08,757 | INFO     | all job control threads have been joined
[2025-10-13 13:07:09] 2025-10-13 17:06:09,487 | INFO     | [job] retrieve thread has finished
[2025-10-13 13:07:09] 2025-10-13 17:06:09,498 | INFO     | [payload] control thread has finished
[2025-10-13 13:07:09] 2025-10-13 17:06:09,595 | INFO     | [payload] failed_post thread has finished
[2025-10-13 13:07:09] 2025-10-13 17:06:09,631 | INFO     | [job] job monitor thread has finished
[2025-10-13 13:07:09] 2025-10-13 17:06:09,704 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 13:07:09] 2025-10-13 17:06:09,708 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 13:07:09] 2025-10-13 17:06:09,755 | INFO     | [data] control thread has finished
[2025-10-13 13:07:09] 2025-10-13 17:06:09,763 | INFO     | [job] control thread has finished
[2025-10-13 13:07:09] 2025-10-13 17:06:09,796 | INFO     | [payload] validate_post thread has finished
[2025-10-13 13:07:09] 2025-10-13 17:06:10,043 | INFO     | [data] copytool_in thread has finished
[2025-10-13 13:07:09] 2025-10-13 17:06:10,176 | INFO     | [job] validate thread has finished
[2025-10-13 13:07:09] 2025-10-13 17:06:10,256 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 13:07:09] 2025-10-13 17:06:10,481 | INFO     | [data] copytool_out thread has finished
[2025-10-13 13:07:09] 2025-10-13 17:06:10,677 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 13:07:09] 2025-10-13 17:06:10,843 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 13:07:09] 2025-10-13 17:06:10,926 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 13:07:09] 2025-10-13 17:06:11,932 | INFO     | [job] queue monitor thread has finished
[2025-10-13 13:07:09] 2025-10-13 17:06:13,717 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 13:07:09] 2025-10-13 17:06:38,520 | INFO     | PID=1467179 has CPU usage=6.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 13:07:09] 2025-10-13 17:06:38,520 | INFO     | .. there are 29 such processes running
[2025-10-13 13:07:09] 2025-10-13 17:06:38,521 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 13:07:09] 2025-10-13 17:06:38,521 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 13:07:09] 2025-10-13 17:06:38,521 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 13:07:09] 2025-10-13 17:07:01,656 | INFO     | [monitor] cgroup control has ended
[2025-10-13 13:07:09] 2025-10-13 17:07:03,659 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140208685463360)>', '<ExcThread(monitor, started 140208032954112)>']
[2025-10-13 13:07:09] 2025-10-13 17:07:03,675 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 13:07:09] 2025-10-13 17:07:03,675 | INFO     | [monitor] control thread has ended
[2025-10-13 13:07:09] 2025-10-13 17:07:08,685 | INFO     | all workflow threads have been joined
[2025-10-13 13:07:09] 2025-10-13 17:07:08,685 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 13:07:09] 2025-10-13 17:07:08,685 | INFO     | traces error code: 0
[2025-10-13 13:07:09] 2025-10-13 17:07:08,686 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 13:07:09] 2025-10-13 17:07:08,877 [wrapper] ==== pilot stdout END ====
[2025-10-13 13:07:09] 2025-10-13 17:07:08,880 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 13:07:09] 2025-10-13 17:07:08,887 [wrapper] pilotpid: 1467179
[2025-10-13 13:07:09] 2025-10-13 17:07:08,894 [wrapper] Pilot exit status: 0
[2025-10-13 13:07:09] 2025-10-13 17:07:08,908 [wrapper] pandaids: 6841177432
[2025-10-13 13:07:09] 2025-10-13 17:07:08,984 [wrapper] cleanup supervisor_pilot 2437941 1467180
[2025-10-13 13:07:09] 2025-10-13 17:07:08,987 [wrapper] Test setup, not cleaning
[2025-10-13 13:07:09] 2025-10-13 17:07:08,991 [wrapper] apfmon messages muted
[2025-10-13 13:07:09] 2025-10-13 17:07:08,995 [wrapper] ==== wrapper stdout END ====
[2025-10-13 13:07:09] 2025-10-13 17:07:08,998 [wrapper] ==== wrapper stderr END ====
[2025-10-13 13:07:09]  *** Error codes and diagnostics ***
[2025-10-13 13:07:09]     "exeErrorCode": 0,
[2025-10-13 13:07:09]     "exeErrorDiag": "",
[2025-10-13 13:07:09]     "pilotErrorCode": 0,
[2025-10-13 13:07:09]     "pilotErrorDiag": "",
[2025-10-13 13:07:09]  *** Listing of results directory ***
[2025-10-13 13:07:09] total 416608
[2025-10-13 13:07:09] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 22:00 pilot3.tar.gz
[2025-10-13 13:07:09] -rwx------. 1 boincer umatlas     36292 Oct 12 22:16 runpilot2-wrapper.sh
[2025-10-13 13:07:09] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 22:16 queuedata.json
[2025-10-13 13:07:09] -rw-r--r--. 1 boincer umatlas       100 Oct 13 08:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 13:07:09] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 08:18 run_atlas
[2025-10-13 13:07:09] -rw-r--r--. 1 boincer umatlas       105 Oct 13 08:18 job.xml
[2025-10-13 13:07:09] -rw-r--r--. 2 boincer umatlas 219940683 Oct 13 08:18 EVNT.46676267._002034.pool.root.1
[2025-10-13 13:07:09] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 08:18 start_atlas.sh
[2025-10-13 13:07:09] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 08:18 shared
[2025-10-13 13:07:09] -rw-r--r--. 2 boincer umatlas    569681 Oct 13 08:18 input.tar.gz
[2025-10-13 13:07:09] -rw-r--r--. 1 boincer umatlas         0 Oct 13 08:18 boinc_lockfile
[2025-10-13 13:07:09] -rw-r--r--. 1 boincer umatlas      2549 Oct 13 08:18 pandaJob.out
[2025-10-13 13:07:09] -rw-------. 1 boincer umatlas    972497 Oct 13 08:19 agis_schedconf.cvmfs.json
[2025-10-13 13:07:09] drwx------. 5 boincer umatlas      4096 Oct 13 08:19 pilot3
[2025-10-13 13:07:09] -rw-r--r--. 1 boincer umatlas      6842 Oct 13 13:02 init_data.xml
[2025-10-13 13:07:09] -rw-------. 1 boincer umatlas 197621372 Oct 13 13:05 HITS.46676269._094822.pool.root.1
[2025-10-13 13:07:09] -rw-r--r--. 1 boincer umatlas       530 Oct 13 13:05 boinc_task_state.xml
[2025-10-13 13:07:09] -rw-------. 1 boincer umatlas      1043 Oct 13 13:05 memory_monitor_summary.json
[2025-10-13 13:07:09] -rw-------. 1 boincer umatlas   1560580 Oct 13 13:05 agis_ddmendpoints.agis.ALL.json
[2025-10-13 13:07:09] -rw-------. 1 boincer umatlas    479824 Oct 13 13:05 log.46676269._094822.job.log.tgz.1
[2025-10-13 13:07:09] -rw-------. 1 boincer umatlas      7828 Oct 13 13:06 heartbeat.json
[2025-10-13 13:07:09] -rw-------. 1 boincer umatlas        95 Oct 13 13:06 pilot_heartbeat.json
[2025-10-13 13:07:09] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 13:07 boinc_mmap_file
[2025-10-13 13:07:09] -rw-r--r--. 1 boincer umatlas        28 Oct 13 13:07 wrapper_checkpoint.txt
[2025-10-13 13:07:09] -rw-------. 1 boincer umatlas      4824 Oct 13 13:07 pilotlog.txt
[2025-10-13 13:07:09] -rw-------. 1 boincer umatlas   2090140 Oct 13 13:07 log.46676269._094822.job.log.1
[2025-10-13 13:07:09] -rw-------. 1 boincer umatlas       357 Oct 13 13:07 output.list
[2025-10-13 13:07:09] -rw-r--r--. 1 boincer umatlas       620 Oct 13 13:07 runtime_log
[2025-10-13 13:07:09] -rw-------. 1 boincer umatlas   2590720 Oct 13 13:07 result.tar.gz
[2025-10-13 13:07:09] -rw-r--r--. 1 boincer umatlas      8709 Oct 13 13:07 runtime_log.err
[2025-10-13 13:07:09] -rw-------. 1 boincer umatlas       657 Oct 13 13:07 ReIODmFINS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmnTmNDmjuqSvm.diag
[2025-10-13 13:07:09] -rw-r--r--. 1 boincer umatlas     21256 Oct 13 13:07 stderr.txt
[2025-10-13 13:07:09] HITS file was successfully produced:
[2025-10-13 13:07:09] -rw-------. 1 boincer umatlas 197621372 Oct 13 13:05 shared/HITS.pool.root.1
[2025-10-13 13:07:09]  *** Contents of shared directory: ***
[2025-10-13 13:07:09] total 410892
[2025-10-13 13:07:09] -rw-r--r--. 2 boincer umatlas 219940683 Oct 13 08:18 ATLAS.root_0
[2025-10-13 13:07:09] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 08:18 start_atlas.sh
[2025-10-13 13:07:09] -rw-r--r--. 2 boincer umatlas    569681 Oct 13 08:18 input.tar.gz
[2025-10-13 13:07:09] -rw-------. 1 boincer umatlas 197621372 Oct 13 13:05 HITS.pool.root.1
[2025-10-13 13:07:09] -rw-------. 1 boincer umatlas   2590720 Oct 13 13:07 result.tar.gz
13:07:10 (1446160): run_atlas exited; CPU time 46061.294028
13:07:10 (1446160): called boinc_finish(0)

</stderr_txt>
]]>

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