Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
04:58:38 (122626): wrapper (7.7.26015): starting
04:58:38 (122626): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 04:58:38] Arguments: --nthreads 8
[2025-10-13 04:58:38] Threads: 8
[2025-10-13 04:58:38] Checking for CVMFS
[2025-10-13 04:58:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 04:58:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 04:58:40] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 04:58:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 04:58:41] 2.13.2.0 196088 124083 243756 151654 0 26 36945986 40960000 12270 16776704 1 100277826 99.804 47010381 34894 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 04:58:41] CVMFS is ok
[2025-10-13 04:58:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 04:58:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 04:58:41] Further information can be found at the LHC@home message board.
[2025-10-13 04:58:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 04:58:41] Checking for apptainer binary...
[2025-10-13 04:58:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 04:58:41] Running /usr/bin/apptainer --version
[2025-10-13 04:58:41] apptainer version 1.4.3-1.el9
[2025-10-13 04:58:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 04:58:41] c-210-31-4.aglt2.org
[2025-10-13 04:58:41] apptainer works
[2025-10-13 04:58:41] Set ATHENA_PROC_NUMBER=8
[2025-10-13 04:58:41] Set ATHENA_CORE_NUMBER=8
[2025-10-13 04:58:42] Starting ATLAS job with PandaID=6841177433
[2025-10-13 04:58:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 08:46:11]  *** The last 200 lines of the pilot log: ***
[2025-10-13 08:46:11] 2025-10-13 12:45:30,511 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 08:46:11] 2025-10-13 12:45:30,516 | INFO     | fitting pss+swap vs Time
[2025-10-13 08:46:11] 2025-10-13 12:45:30,517 | INFO     | sum of square deviations: 3301961664.777261
[2025-10-13 08:46:11] 2025-10-13 12:45:30,519 | INFO     | sum of deviations: 19516832563.381805
[2025-10-13 08:46:11] 2025-10-13 12:45:30,520 | INFO     | mean x: 1760352804.9681818
[2025-10-13 08:46:11] 2025-10-13 12:45:30,520 | INFO     | mean y: 2489778.0545454547
[2025-10-13 08:46:11] 2025-10-13 12:45:30,520 | INFO     | -- intersect: -10402389028.847376
[2025-10-13 08:46:11] 2025-10-13 12:45:30,520 | INFO     | intersect: -10402389028.847376
[2025-10-13 08:46:11] 2025-10-13 12:45:30,521 | INFO     | chi2: 2.590700404671473
[2025-10-13 08:46:11] 2025-10-13 12:45:30,521 | INFO     | sum of square deviations: 3081938445.609306
[2025-10-13 08:46:11] 2025-10-13 12:45:30,523 | INFO     | sum of deviations: 32870183764.855797
[2025-10-13 08:46:11] 2025-10-13 12:45:30,523 | INFO     | mean x: 1760352652.4744186
[2025-10-13 08:46:11] 2025-10-13 12:45:30,523 | INFO     | mean y: 2498857.246511628
[2025-10-13 08:46:11] 2025-10-13 12:45:30,524 | INFO     | -- intersect: -18772410570.36401
[2025-10-13 08:46:11] 2025-10-13 12:45:30,524 | INFO     | intersect: -18772410570.36401
[2025-10-13 08:46:11] 2025-10-13 12:45:30,524 | INFO     | chi2: 1.9103746747223171
[2025-10-13 08:46:11] 2025-10-13 12:45:30,524 | INFO     | current chi2=1.9103746747223171 (change=26.260301219022192 %)
[2025-10-13 08:46:11] 2025-10-13 12:45:30,525 | INFO     | sum of square deviations: 2871902176.8809633
[2025-10-13 08:46:11] 2025-10-13 12:45:30,526 | INFO     | sum of deviations: 32197596887.119038
[2025-10-13 08:46:11] 2025-10-13 12:45:30,526 | INFO     | mean x: 1760352499.9761906
[2025-10-13 08:46:11] 2025-10-13 12:45:30,526 | INFO     | mean y: 2498368.8238095236
[2025-10-13 08:46:11] 2025-10-13 12:45:30,526 | INFO     | -- intersect: -19733243548.06213
[2025-10-13 08:46:11] 2025-10-13 12:45:30,527 | INFO     | intersect: -19733243548.06213
[2025-10-13 08:46:11] 2025-10-13 12:45:30,527 | INFO     | chi2: 1.9117696284673564
[2025-10-13 08:46:11] 2025-10-13 12:45:30,527 | INFO     | current chi2=1.9117696284673564 (change=-0.07301990355593718 %)
[2025-10-13 08:46:11] 2025-10-13 12:45:30,527 | INFO     | right removable region: 209
[2025-10-13 08:46:11] 2025-10-13 12:45:30,528 | INFO     | sum of square deviations: 3081888913.6558027
[2025-10-13 08:46:11] 2025-10-13 12:45:30,530 | INFO     | sum of deviations: -20796753091.144188
[2025-10-13 08:46:11] 2025-10-13 12:45:30,530 | INFO     | mean x: 1760352957.4790697
[2025-10-13 08:46:11] 2025-10-13 12:45:30,530 | INFO     | mean y: 2517471.0790697676
[2025-10-13 08:46:11] 2025-10-13 12:45:30,530 | INFO     | -- intersect: 11881474447.023582
[2025-10-13 08:46:11] 2025-10-13 12:45:30,530 | INFO     | intersect: 11881474447.023582
[2025-10-13 08:46:11] 2025-10-13 12:45:30,531 | INFO     | chi2: 0.8059081744607703
[2025-10-13 08:46:11] 2025-10-13 12:45:30,531 | INFO     | current chi2=0.8059081744607703 (change=68.89226662382184 %)
[2025-10-13 08:46:11] 2025-10-13 12:45:30,531 | INFO     | sum of square deviations: 2871829464.9571433
[2025-10-13 08:46:11] 2025-10-13 12:45:30,533 | INFO     | sum of deviations: -15200539117.471432
[2025-10-13 08:46:11] 2025-10-13 12:45:30,534 | INFO     | mean x: 1760353109.9857142
[2025-10-13 08:46:11] 2025-10-13 12:45:30,534 | INFO     | mean y: 2513355.842857143
[2025-10-13 08:46:11] 2025-10-13 12:45:30,534 | INFO     | -- intersect: 9320029119.021942
[2025-10-13 08:46:11] 2025-10-13 12:45:30,534 | INFO     | intersect: 9320029119.021942
[2025-10-13 08:46:11] 2025-10-13 12:45:30,534 | INFO     | chi2: 0.7652507578951357
[2025-10-13 08:46:11] 2025-10-13 12:45:30,535 | INFO     | current chi2=0.7652507578951357 (change=5.044919241927071 %)
[2025-10-13 08:46:11] 2025-10-13 12:45:30,535 | INFO     | left removable region: 20
[2025-10-13 08:46:11] 2025-10-13 12:45:30,535 | INFO     | sum of square deviations: 2093592771.238088
[2025-10-13 08:46:11] 2025-10-13 12:45:30,536 | INFO     | sum of deviations: 3048777866.7619047
[2025-10-13 08:46:11] 2025-10-13 12:45:30,537 | INFO     | mean x: 1760353079.5079365
[2025-10-13 08:46:11] 2025-10-13 12:45:30,537 | INFO     | mean y: 2519793.492063492
[2025-10-13 08:46:11] 2025-10-13 12:45:30,537 | INFO     | -- intersect: -2560980415.441175
[2025-10-13 08:46:11] 2025-10-13 12:45:30,537 | INFO     | intersect: -2560980415.441175
[2025-10-13 08:46:11] 2025-10-13 12:45:30,537 | INFO     | chi2: 0.0023135508246646054
[2025-10-13 08:46:11] 2025-10-13 12:45:30,538 | INFO     | -- intersect: -2560980415.441175
[2025-10-13 08:46:11] 2025-10-13 12:45:30,538 | INFO     | current memory leak: 1.46 B/s (using 189 data points, chi2=0.00)
[2025-10-13 08:46:11] 2025-10-13 12:45:30,539 | INFO     | could have reported an average CPU frequency of 2521 MHz (11 samples)
[2025-10-13 08:46:11] 2025-10-13 12:45:30,539 | INFO     | ..............................
[2025-10-13 08:46:11] 2025-10-13 12:45:30,539 | INFO     | . Timing measurements:
[2025-10-13 08:46:11] 2025-10-13 12:45:30,539 | INFO     | . get job = 0 s
[2025-10-13 08:46:11] 2025-10-13 12:45:30,539 | INFO     | . initial setup = 3 s
[2025-10-13 08:46:11] 2025-10-13 12:45:30,539 | INFO     | . payload setup = 38 s
[2025-10-13 08:46:11] 2025-10-13 12:45:30,539 | INFO     | . stage-in = 0 s
[2025-10-13 08:46:11] 2025-10-13 12:45:30,539 | INFO     | . payload execution = 13415 s
[2025-10-13 08:46:11] 2025-10-13 12:45:30,540 | INFO     | . stage-out = 2 s
[2025-10-13 08:46:11] 2025-10-13 12:45:30,540 | INFO     | . log creation = 0 s
[2025-10-13 08:46:11] 2025-10-13 12:45:30,540 | INFO     | ..............................
[2025-10-13 08:46:11] 2025-10-13 12:45:30,665 | INFO     | 
[2025-10-13 08:46:11] 2025-10-13 12:45:30,665 | INFO     | job summary report
[2025-10-13 08:46:11] 2025-10-13 12:45:30,665 | INFO     | --------------------------------------------------
[2025-10-13 08:46:11] 2025-10-13 12:45:30,665 | INFO     | PanDA job id: 6841177433
[2025-10-13 08:46:11] 2025-10-13 12:45:30,665 | INFO     | task id: 46676269
[2025-10-13 08:46:11] 2025-10-13 12:45:30,666 | INFO     | errors: (none)
[2025-10-13 08:46:11] 2025-10-13 12:45:30,666 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 08:46:11] 2025-10-13 12:45:30,666 | INFO     | pilot state: finished 
[2025-10-13 08:46:11] 2025-10-13 12:45:30,666 | INFO     | transexitcode: 0
[2025-10-13 08:46:11] 2025-10-13 12:45:30,666 | INFO     | exeerrorcode: 0
[2025-10-13 08:46:11] 2025-10-13 12:45:30,666 | INFO     | exeerrordiag: 
[2025-10-13 08:46:11] 2025-10-13 12:45:30,666 | INFO     | exitcode: 0
[2025-10-13 08:46:11] 2025-10-13 12:45:30,666 | INFO     | exitmsg: OK
[2025-10-13 08:46:11] 2025-10-13 12:45:30,666 | INFO     | cpuconsumptiontime: 47757 s
[2025-10-13 08:46:11] 2025-10-13 12:45:30,666 | INFO     | nevents: 400
[2025-10-13 08:46:11] 2025-10-13 12:45:30,666 | INFO     | neventsw: 0
[2025-10-13 08:46:11] 2025-10-13 12:45:30,667 | INFO     | pid: 135183
[2025-10-13 08:46:11] 2025-10-13 12:45:30,667 | INFO     | pgrp: 135183
[2025-10-13 08:46:11] 2025-10-13 12:45:30,667 | INFO     | corecount: 8
[2025-10-13 08:46:11] 2025-10-13 12:45:30,667 | INFO     | event service: False
[2025-10-13 08:46:11] 2025-10-13 12:45:30,667 | INFO     | sizes: {0: 2347978, 1: 2348663, 2: 2348862, 3: 2348862, 14: 2348890, 25: 2348918, 35: 2349074, 37: 2349364, 46: 2349392, 13457: 2379736, 13458: 2379735, 13461: 238
[2025-10-13 08:46:11] 2025-10-13 12:45:30,667 | INFO     | --------------------------------------------------
[2025-10-13 08:46:11] 2025-10-13 12:45:30,667 | INFO     | 
[2025-10-13 08:46:11] 2025-10-13 12:45:30,667 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-13 08:46:11] 2025-10-13 12:45:30,696 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 08:46:11] 2025-10-13 12:45:30,697 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 08:46:11] 2025-10-13 12:45:30,697 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 08:46:11] 2025-10-13 12:45:30,697 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 08:46:11] 2025-10-13 12:45:30,697 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 08:46:11] 2025-10-13 12:45:30,697 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 08:46:11] 2025-10-13 12:45:30,697 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 08:46:11] 2025-10-13 12:45:30,697 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 08:46:11] 2025-10-13 12:45:30,697 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 08:46:11] 2025-10-13 12:45:30,698 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 08:46:11] 2025-10-13 12:45:30,698 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 08:46:11] 2025-10-13 12:45:30,698 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 08:46:11] 2025-10-13 12:45:30,698 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 08:46:11] 2025-10-13 12:45:30,698 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 08:46:11] 2025-10-13 12:45:30,698 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 08:46:11] 2025-10-13 12:45:30,698 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 08:46:11] 2025-10-13 12:45:30,698 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 08:46:11] 2025-10-13 12:45:30,698 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 08:46:11] 2025-10-13 12:45:30,698 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 08:46:11] 2025-10-13 12:45:30,698 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 08:46:11] 2025-10-13 12:45:30,698 | INFO     | job 6841177433 has completed (purged errors)
[2025-10-13 08:46:11] 2025-10-13 12:45:30,699 | INFO     | overall cleanup function is called
[2025-10-13 08:46:11] 2025-10-13 12:45:31,708 | INFO     | --- collectZombieJob: --- 10, [135183]
[2025-10-13 08:46:11] 2025-10-13 12:45:31,708 | INFO     | zombie collector waiting for pid 135183
[2025-10-13 08:46:11] 2025-10-13 12:45:31,708 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 08:46:11] 2025-10-13 12:45:31,708 | INFO     | collected zombie processes
[2025-10-13 08:46:11] 2025-10-13 12:45:31,709 | INFO     | will attempt to kill all subprocesses of pid=135183
[2025-10-13 08:46:11] 2025-10-13 12:45:31,982 | INFO     | process IDs to be killed: [135183] (in reverse order)
[2025-10-13 08:46:11] 2025-10-13 12:45:32,143 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 08:46:11] 2025-10-13 12:45:32,143 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 08:46:11] 2025-10-13 12:45:32,152 | INFO     | did not find any defunct processes belonging to 135183
[2025-10-13 08:46:11] 2025-10-13 12:45:32,161 | INFO     | did not find any defunct processes belonging to 135183
[2025-10-13 08:46:11] 2025-10-13 12:45:32,162 | INFO     | ready for new job
[2025-10-13 08:46:11] 2025-10-13 12:45:32,162 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 08:46:11] 2025-10-13 12:45:32,165 | INFO     | ***************************************
[2025-10-13 08:46:11] 2025-10-13 12:45:32,165 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 08:46:11] 2025-10-13 12:45:32,166 | INFO     | ***************************************
[2025-10-13 08:46:11] 2025-10-13 12:45:32,166 | INFO     | 
[2025-10-13 08:46:11] 2025-10-13 12:45:32,171 | INFO     | architecture information:
[2025-10-13 08:46:11] 2025-10-13 12:45:32,172 | INFO     | executing command: cat /etc/os-release
[2025-10-13 08:46:11] 2025-10-13 12:45:32,204 | INFO     | cat /etc/os-release:
[2025-10-13 08:46:11] NAME="CentOS Linux"
[2025-10-13 08:46:11] VERSION="7 (Core)"
[2025-10-13 08:46:11] ID="centos"
[2025-10-13 08:46:11] ID_LIKE="rhel fedora"
[2025-10-13 08:46:11] VERSION_ID="7"
[2025-10-13 08:46:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 08:46:11] ANSI_COLOR="0;31"
[2025-10-13 08:46:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 08:46:11] HOME_URL="https://www.centos.org/"
[2025-10-13 08:46:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 08:46:11] 
[2025-10-13 08:46:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 08:46:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 08:46:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 08:46:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 08:46:11] 
[2025-10-13 08:46:11] 2025-10-13 12:45:32,205 | INFO     | ***************************************
[2025-10-13 08:46:11] 2025-10-13 12:45:32,709 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-13 08:46:11] 2025-10-13 12:45:32,731 | INFO     | sufficient remaining disk space (73754738688 B)
[2025-10-13 08:46:11] 2025-10-13 12:45:32,731 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 08:46:11] 2025-10-13 12:45:32,731 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 08:46:11] 2025-10-13 12:45:32,732 | INFO     | update_server=False
[2025-10-13 08:46:11] 2025-10-13 12:45:32,732 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 08:46:11] 2025-10-13 12:45:32,732 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 08:46:11] 2025-10-13 12:45:32,732 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 08:46:11] 2025-10-13 12:45:32,962 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 08:46:11] 2025-10-13 12:45:32,962 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 08:46:11] 2025-10-13 12:45:32,963 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 08:46:11] 2025-10-13 12:45:32,963 | INFO     | will abort loop
[2025-10-13 08:46:11] 2025-10-13 12:45:33,222 | INFO     | all data control threads have been joined
[2025-10-13 08:46:11] 2025-10-13 12:45:33,737 | INFO     | [job] retrieve thread has finished
[2025-10-13 08:46:11] 2025-10-13 12:45:33,765 | INFO     | all payload control threads have been joined
[2025-10-13 08:46:11] 2025-10-13 12:45:33,970 | INFO     | [job] job monitor thread has finished
[2025-10-13 08:46:11] 2025-10-13 12:45:34,021 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 08:46:11] 2025-10-13 12:45:34,023 | INFO     | [job] validate thread has finished
[2025-10-13 08:46:11] 2025-10-13 12:45:34,042 | INFO     | [data] copytool_in thread has finished
[2025-10-13 08:46:11] 2025-10-13 12:45:34,043 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 08:46:11] 2025-10-13 12:45:34,227 | INFO     | [data] control thread has finished
[2025-10-13 08:46:11] 2025-10-13 12:45:34,249 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 08:46:11] 2025-10-13 12:45:34,434 | INFO     | all job control threads have been joined
[2025-10-13 08:46:11] 2025-10-13 12:45:34,448 | INFO     | [payload] validate_post thread has finished
[2025-10-13 08:46:11] 2025-10-13 12:45:34,742 | INFO     | [data] copytool_out thread has finished
[2025-10-13 08:46:11] 2025-10-13 12:45:34,771 | INFO     | [payload] control thread has finished
[2025-10-13 08:46:11] 2025-10-13 12:45:34,973 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 08:46:11] 2025-10-13 12:45:35,197 | INFO     | [payload] failed_post thread has finished
[2025-10-13 08:46:11] 2025-10-13 12:45:35,440 | INFO     | [job] control thread has finished
[2025-10-13 08:46:11] 2025-10-13 12:45:35,677 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 08:46:11] 2025-10-13 12:45:36,682 | INFO     | [job] queue monitor thread has finished
[2025-10-13 08:46:11] 2025-10-13 12:45:36,742 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 08:46:11] 2025-10-13 12:46:03,684 | INFO     | PID=127117 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-13 08:46:11] 2025-10-13 12:46:03,685 | INFO     | .. there are 10 such processes running
[2025-10-13 08:46:11] 2025-10-13 12:46:03,685 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 08:46:11] 2025-10-13 12:46:03,685 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 08:46:11] 2025-10-13 12:46:03,685 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 08:46:11] 2025-10-13 12:46:04,367 | INFO     | [monitor] cgroup control has ended
[2025-10-13 08:46:11] 2025-10-13 12:46:05,847 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140377145083712)>', '<ExcThread(monitor, started 140376434272000)>']
[2025-10-13 08:46:11] 2025-10-13 12:46:06,706 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 08:46:11] 2025-10-13 12:46:06,706 | INFO     | [monitor] control thread has ended
[2025-10-13 08:46:11] 2025-10-13 12:46:10,873 | INFO     | all workflow threads have been joined
[2025-10-13 08:46:11] 2025-10-13 12:46:10,873 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 08:46:11] 2025-10-13 12:46:10,873 | INFO     | traces error code: 0
[2025-10-13 08:46:11] 2025-10-13 12:46:10,874 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 08:46:11] 2025-10-13 12:46:11,059 [wrapper] ==== pilot stdout END ====
[2025-10-13 08:46:11] 2025-10-13 12:46:11,062 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 08:46:11] 2025-10-13 12:46:11,064 [wrapper] pilotpid: 127117
[2025-10-13 08:46:11] 2025-10-13 12:46:11,067 [wrapper] Pilot exit status: 0
[2025-10-13 08:46:11] 2025-10-13 12:46:11,079 [wrapper] pandaids: 6841177433
[2025-10-13 08:46:11] 2025-10-13 12:46:11,138 [wrapper] cleanup supervisor_pilot  436110 127118
[2025-10-13 08:46:11] 2025-10-13 12:46:11,145 [wrapper] Test setup, not cleaning
[2025-10-13 08:46:11] 2025-10-13 12:46:11,149 [wrapper] apfmon messages muted
[2025-10-13 08:46:11] 2025-10-13 12:46:11,154 [wrapper] ==== wrapper stdout END ====
[2025-10-13 08:46:11] 2025-10-13 12:46:11,158 [wrapper] ==== wrapper stderr END ====
[2025-10-13 08:46:11]  *** Error codes and diagnostics ***
[2025-10-13 08:46:11]     "exeErrorCode": 0,
[2025-10-13 08:46:11]     "exeErrorDiag": "",
[2025-10-13 08:46:11]     "pilotErrorCode": 0,
[2025-10-13 08:46:11]     "pilotErrorDiag": "",
[2025-10-13 08:46:11]  *** Listing of results directory ***
[2025-10-13 08:46:11] total 411452
[2025-10-13 08:46:11] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 22:00 pilot3.tar.gz
[2025-10-13 08:46:11] -rwx------. 1 boincer umatlas     36292 Oct 12 22:16 runpilot2-wrapper.sh
[2025-10-13 08:46:11] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 22:16 queuedata.json
[2025-10-13 08:46:11] -rw-r--r--. 1 boincer umatlas       100 Oct 13 04:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 08:46:11] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 04:58 run_atlas
[2025-10-13 08:46:11] -rw-r--r--. 1 boincer umatlas       105 Oct 13 04:58 job.xml
[2025-10-13 08:46:11] -rw-r--r--. 2 boincer umatlas 220297435 Oct 13 04:58 EVNT.46676267._002047.pool.root.1
[2025-10-13 08:46:11] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 04:58 start_atlas.sh
[2025-10-13 08:46:11] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 04:58 shared
[2025-10-13 08:46:11] -rw-r--r--. 2 boincer umatlas    569682 Oct 13 04:58 input.tar.gz
[2025-10-13 08:46:11] -rw-r--r--. 1 boincer umatlas         0 Oct 13 04:58 boinc_lockfile
[2025-10-13 08:46:11] -rw-r--r--. 1 boincer umatlas      2549 Oct 13 04:58 pandaJob.out
[2025-10-13 08:46:11] -rw-------. 1 boincer umatlas    972857 Oct 13 04:59 agis_schedconf.cvmfs.json
[2025-10-13 08:46:11] drwx------. 5 boincer umatlas      4096 Oct 13 04:59 pilot3
[2025-10-13 08:46:11] -rw-r--r--. 1 boincer umatlas      6842 Oct 13 08:38 init_data.xml
[2025-10-13 08:46:11] -rw-------. 1 boincer umatlas 192615955 Oct 13 08:44 HITS.46676269._094823.pool.root.1
[2025-10-13 08:46:11] -rw-r--r--. 1 boincer umatlas       531 Oct 13 08:44 boinc_task_state.xml
[2025-10-13 08:46:11] -rw-------. 1 boincer umatlas      1045 Oct 13 08:45 memory_monitor_summary.json
[2025-10-13 08:46:11] -rw-------. 1 boincer umatlas   1560580 Oct 13 08:45 agis_ddmendpoints.agis.ALL.json
[2025-10-13 08:46:11] -rw-------. 1 boincer umatlas    455878 Oct 13 08:45 log.46676269._094823.job.log.tgz.1
[2025-10-13 08:46:11] -rw-------. 1 boincer umatlas        95 Oct 13 08:45 pilot_heartbeat.json
[2025-10-13 08:46:11] -rw-------. 1 boincer umatlas      7831 Oct 13 08:45 heartbeat.json
[2025-10-13 08:46:11] -rw-r--r--. 1 boincer umatlas        28 Oct 13 08:46 wrapper_checkpoint.txt
[2025-10-13 08:46:11] -rw-------. 1 boincer umatlas      5009 Oct 13 08:46 pilotlog.txt
[2025-10-13 08:46:11] -rw-------. 1 boincer umatlas   1803254 Oct 13 08:46 log.46676269._094823.job.log.1
[2025-10-13 08:46:11] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 08:46 boinc_mmap_file
[2025-10-13 08:46:11] -rw-------. 1 boincer umatlas       357 Oct 13 08:46 output.list
[2025-10-13 08:46:11] -rw-r--r--. 1 boincer umatlas       620 Oct 13 08:46 runtime_log
[2025-10-13 08:46:11] -rw-------. 1 boincer umatlas   2273280 Oct 13 08:46 result.tar.gz
[2025-10-13 08:46:11] -rw-r--r--. 1 boincer umatlas      8714 Oct 13 08:46 runtime_log.err
[2025-10-13 08:46:11] -rw-------. 1 boincer umatlas       659 Oct 13 08:46 0fJODmFINS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmoTmNDmpoBAdn.diag
[2025-10-13 08:46:11] -rw-r--r--. 1 boincer umatlas     21060 Oct 13 08:46 stderr.txt
[2025-10-13 08:46:11] HITS file was successfully produced:
[2025-10-13 08:46:11] -rw-------. 1 boincer umatlas 192615955 Oct 13 08:44 shared/HITS.pool.root.1
[2025-10-13 08:46:11]  *** Contents of shared directory: ***
[2025-10-13 08:46:11] total 406040
[2025-10-13 08:46:11] -rw-r--r--. 2 boincer umatlas 220297435 Oct 13 04:58 ATLAS.root_0
[2025-10-13 08:46:11] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 04:58 start_atlas.sh
[2025-10-13 08:46:11] -rw-r--r--. 2 boincer umatlas    569682 Oct 13 04:58 input.tar.gz
[2025-10-13 08:46:11] -rw-------. 1 boincer umatlas 192615955 Oct 13 08:44 HITS.pool.root.1
[2025-10-13 08:46:11] -rw-------. 1 boincer umatlas   2273280 Oct 13 08:46 result.tar.gz
08:46:32 (122626): run_atlas exited; CPU time 48013.041740
08:46:32 (122626): called boinc_finish(0)

</stderr_txt>
]]>

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